>input_sequence_43163
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-------------------------ATGATTTTGCTGTGCCCTTCTTCTTTTAGCAATGGACACAATTGTGTTCTGGGAA
TGCTATGCAGGGCTCCAGGGC--TTCTTGCCCGGTATGTACCATGTAGATTTGGAGTGATGTGACCTTCCTGGGCTCCTT
GCCCAGTAT--ATATGGGAGTGATGTGCGAACAAATGATTCC---------------------GTTTTGAAGGACACATC
ATTTAATATATGAGGGACATAGTCTTTTGGTGCATACTTGAGAAGATACACTGT-CCTTGGTTGCTTTTCTGATTGTACA
TTACTGCTGCTTATTATTTGACAGACTTGGGATTGAGGATGTCAGCGGAGGTGACTCTGGTCTTGGGCACTCTAATTTGG
GGAAAAGGTGCCAGTCTTACGCTCTTGATATTTCTTTACAAAAAGTGGAGTATCTTTATTGCTTAACCATGGAAAGATTC
CTCTGAATTTGGTTTCTTGGTAGTACTATTCCATTTCCTTGCTGTTTATTCAGTACCGATAGACAATAGTGCTTTCCATG
TTCAGTCTTCACCAGCATAACAGAGGATATAGTGGACTTAAGAGCATGTGAATTGTTAATCATTACTGATCTTTCTGAGT
AGTAC---------------------------------------------------------------------------
-----------CTGATTGCATAATCCCTTTTTTTTCTTCTATTATATTCTAAA---------------------------
-----CATGCCACT---------------------------------GGTGCCATTAACACTATTGAAATATTTTGTAAC
ACACTATGCATTTTCTTTGCTGATTTATTTCCTGAGTCAACACCATATTGGATC-TGCAATACTAACATAATAATAATTT
GATTTCGTGCAGGGCCAGAGATGAACCATCTTCATCTGGTCCAAAGTCAAAGGCTTGCCGCGAGAAAATGCGGAGGGATA
AACTGAATGACAGGTATGGGCATCTGGCAGTAGATACTCCTAAAGCACCTCTTCCATGTAGGGAAAGGAAAAGATGCATA
TACGTGCAAACATATATTCTTTCATTCCATGTCTGTATAAACTGTGATTTTT-ATCCGATTGCAGGTTTCTTGAATTATG
TTCCGTTATGAATTCTGGCAAGCACAGTGGCCTTGAAGAATGTTCGGCTAGCAATCCTGGGAAGAACGCTAAGTTGGATA
AAGCAAGTATCTTGAGCGATGCAACGCGTATGTTGACACAGCTCAGAGGTGAGACCGAAAAGCTGAAGGAATCAAATTCG
AATCTTCGAGAGACAATCAAGGACCTTAAGGTACCTTTGTTCCCACATCACTTTGCATCTTATTGTTGGACTTTGAAATG
CTTGACGCCATCCACACACTTGTTTGTGGCTGT----------------CATGAAAATCCATGAGCCTTTTCTCCCCTCA
GTTCTCAGTACCGGATTAAAAAATGGCAAACTTGTTCTCATGCATTCTTCGCTGCGCCCAGTTTGAATTATGTGCAACAG
TTGGCTGACCACCAATTAAGTTACTAGATGTGCCATCTTTCACCAATTCACTGACATTGCCTCCTGCCATCTGAGAATGT
TAGATCAGATAAACTTTGTGGGTTTTCTTTACAAGTGGCTTTATTATTTTCCAGGTGGAGAAGAATGAGCTCCGAGATGA
GAAGTTGAGCCTGAAGGCAGAAAAGGAAAGGCTGGAACAACAACTCAAAGCAGCAAGTGCTGCTCCTACAGGATTTGCCC
CTCATATGCCTTATCCAGCTGCATTCCACCCCGCTGTCTACCCTCCATTTGCACCACCCTATCAAGTCCCAGCCAACAAA
GGAGCTCCGGTACCCGCTGCATTCCCTGGAATGGCGATGTGGCACTGGTTGCCCCCAACCGCCATGGACACAACTCAAGA
TCCAAAGCTTTGGCCGCCGAATGCTTAG----------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>chr6A_1_TraesCS6A01G045100
ATGGTCGAGATTAGTTGAATCTGCCGCTTTGAATTCTTCTTTATATTGGCATATATAGAGGTATAGATGACACAAAAATT
GCCTGAAAAACAAGTCAAAACATTGCGTGAA--AATCATCCACCAATATG-GACCACATGGGGCACGTGGAAACAAGCAA
GGCGATAACGATCGGGGCCCACACGGCACGCAGCCCAACGGCCCGAGCCATCGCACGCCACCAGTTCTTCTTCTCCACTC
GCTACCCGGATAGGACCTCAGGAAAATACCAAATCACAAACGCACCCCTCTCTGCGGGAACAAGAGCGCGTCCAGGGTGC
GATCTGCAAGAAACCGCAGGCAGACCTCACCATCCCC--------TCC------CCTCCCCAGCAGCCAGCCTCCCCCGC
GAACGAACCCTAGCCAGGCACGGCGGCGGATCCCTCGGGCGGCCCGGAGCCAC-GGCCGCCGCGATGATGGA---CGGCG
GCGTCGGCGTCGGCGACCCGGTCGAGGATTTCCTCATCGGGGGCGCCGGCGACGGCGGGGAGGG---CCTCGCCGCCTTC
TGCGACGGAGGGTACGGAC----------CCGCGGCGGCAAAGAGACCCCCTTTTCTTCTTCTTATTCTGCTGCCGCTGC
TGCTGCT---------------GCTTTTGCGGTCTCGCGCGGAGGATTTT---GTAGTGCCCTCGAGGTCGCTGTCGCCG
TGGGTTTCTTTATTGGCCCCGGGCGGCGCGGTTCTTGCCTCATCTCATCCGCGCGGCCACGCGGC-----CTGCGGCGGT
GGAGAAAGCGAGCGCTCATGCTGGTAGTCTCTGCGATCTTCTATATAGCCTGCGACCCTGATCGATGCGGGC-TTGGAGG
CACTCGCTGTTCTCTGTGATTCCCTGCACGAAATCTGTGGCTCCAAGGCCTTGAGAACTGTG---ATGCAATTCTGGTCA
TAGGTGATGTTGTGACGATAATGCCAGTGAGGAACTGGTTAACCCCTGGCACAAATCTGCAGATCTCATAGCATATGAGA
----GCAGGTTTCGCTTAGCGATTGATGATTTTGCTGTGCCCTTCTTCTTTTAGCAATGGACACAATTGTGTTCTGGGAA
TGCTATGCAGGGCTCCAGGGC--TTCTTGCCCGGTATGTACCATGTAGATTTGGAGTGATGTGACCTTCCTGGGCTCCTT
GCCCAGTAT--ATATGGGAGTGATGTGCGAACAAATGATTCC---------------------GTTTTGAAGGACACATC
ATTTAATATATGAGGGACATAGTCTTTTGGTGCATACTTGAGAAGATACACTGT-CCTTGGTTGCTTTTCTGATTGTACA
TTACTGCTGCTTATTATTTGACAGACTTGGGATTGAGGATGTCAGCGGAGGTGACTCTGGTCTTGGGCACTCTAATTTGG
GGAAAAGGTGCCAGTCTTACGCTCTTGATATTTCTTTACAAAAAGTGGAGTATCTTTATTGCTTAACCATGGAAAGATTC
CTCTGAATTTGGTTTCTTGGTAGTACTATTCCATTTCCTTGCTGTTTATTCAGTACCGATAGACAATAGTGCTTTCCATG
TTCAGTCTTCACCAGCATAACAGAGGATATAGTGGACTTAAGAGCATGTGAATTGTTAATCATTACTGATCTTTCTGAGT
AGTAC---------------------------------------------------------------------------
-----------CTGATTGCATAATCCCTTTTTTTTCTTCTATTATATTCTAAA---------------------------
-----CATGCCACT---------------------------------GGTGCCATTAACACTATTGAAATATTTTGTAAC
ACACTATGCATTTTCTTTGCTGATTTATTTCCTGAGTCAACACCATATTGGATC-TGCAATACTAACATAATAATAATTT
GATTTCGTGCAGGGCCAGAGATGAACCATCTTCATCTGGTCCAAAGTCAAAGGCTTGCCGCGAGAAAATGCGGAGGGATA
AACTGAATGACAGGTATGGGCATCTGGCAGTAGATACTCCTAAAGCACCTCTTCCATGTAGGGAAAGGAAAAGATGCATA
TACGTGCAAACATATATTCTTTCATTCCATGTCTGTATAAACTGTGATTTTT-ATCCGATTGCAGGTTTCTTGAATTATG
TTCCGTTATGAATTCTGGCAAGCACAGTGGCCTTGAAGAATGTTCGGCTAGCAATCCTGGGAAGAACGCTAAGTTGGATA
AAGCAAGTATCTTGAGCGATGCAACGCGTATGTTGACACAGCTCAGAGGTGAGACCGAAAAGCTGAAGGAATCAAATTCG
AATCTTCGAGAGACAATCAAGGACCTTAAGGTACCTTTGTTCCCACATCACTTTGCATCTTATTGTTGGACTTTGAAATG
CTTGACGCCATCCACACACTTGTTTGTGGCTGT----------------CATGAAAATCCATGAGCCTTTTCTCCCCTCA
GTTCTCAGTACCGGATTAAAAAATGGCAAACTTGTTCTCATGCATTCTTCGCTGCGCCCAGTTTGAATTATGTGCAACAG
TTGGCTGACCACCAATTAAGTTACTAGATGTGCCATCTTTCACCAATTCACTGACATTGCCTCCTGCCATCTGAGAATGT
TAGATCAGATAAACTTTGTGGGTTTTCTTTACAAGTGGCTTTATTATTTTCCAGGTGGAGAAGAATGAGCTCCGAGATGA
GAAGTTGAGCCTGAAGGCAGAAAAGGAAAGGCTGGAACAACAACTCAAAGCAGCAAGTGCTGCTCCTACAGGATTTGCCC
CTCATATGCCTTATCCAGCTGCATTCCACCCCGCTGTCTACCCTCCATTTGCACCACCCTATCAAGTCCCAGCCAACAAA
GGAGCTCCGGTACCCGCTGCATTCCCTGGAATGGCGATGTGGCACTGGTTGCCCCCAACCGCCATGGACACAACTCAAGA
TCCAAAGCTTTGGCCGCCGAATGCTTAGGCGGGCCGACCCCGGGATGCTGACTTGCGCTGCCATTAGCCCATTGGCAATT
TCGAACGTTTGTCAGGTCCCTGAGATGAAAGGAAGCTCGCGATTGCAGTTATTGTGTTTAGCCTGTTGTTTTGGGG-TCA
CTTGTCCCATAGAGAGGTGATACCTGTAATTAATCTGGATCTTAACCCTCTTGCTTGGAAAATATATTCAGTGCTACCAT
ACCTCTTGTATGAGTGTTATGTATGGAATTGCACTGGTCTGTTTCTTGAGTTTCTACCTACAAGTACTTGTGTGATGCAT
TTGGCAGTACCTGTTTTGTCTATATAAAGTTGAACATGTGAGCACTTGCATAGCTGATCTTTGAAGAAAATAAAATATGT
CATGTAGAACATTTGTGTTCTTTCATTGAGAAGATTTGTGTTTATCTTGTTACATCATTTCAAGAAGATAAATAAGTTAC
TGATATAGTAAGTGGAAAAGGTTCACTTATAATGCCCAAGCAATACAACAATGACAAAAAAAGCG----TTTTTTAACTC
AAAACTCTACAGCTCTTCTGCCATAAA-AGGTACTTCTATTACTCTGAACAAGCACACTTCCAAGTTTGTTG--------
-------------TCCTCCACTTTTTTGGTAAGAACTTAACCAAATGTGCTAAAAT------------------------
--------------------------------------------------------------------------------
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----------ACAAAGGTACCCTGACTATGTAAGTACCATCTCCAAACTAGCAAATTAACAGCAAATTGGATCAGCCTTA
ATGGCTGATCATGATCGTGTGTTTTGAGATAGCCTGCCTATTCTCCTTCCTATTCAGCCTTCTGTTGACCATACCGGCAC
TGAACGGGTTCCCCTTCGATGAGCTTCTCCAGGGCATCTGATGGGAGGCCGATCATCTCGAGGGTCTTCTCCCAAACAAG
CTGCGATGTTTCGAGGTCGTGTGCTTCTTCGGAGGCATTCATTGGATTACAGTCGTAGTTGATGCAAGCACAAACAGGCC
AGTCTTCAGACTTCAACGTCTCGCAGTATTCCGGAACTTGGGGGTCAGA
>chr6D_96
CAAAAATTGCCTG-------------------------------------------------------------------
------------------------------A--AATCATCGACGCAAATC-GACCACATGGGGCACGTGGAACAGA-CAA
GGCGATAACGATCGGGACCCACACGGCACGCAGCCCAACGGCACGAGCCATCGCACGCCACCAGTTCTCCTTCCTCACTC
GCTACTCAGATAGGACCCCCGAGAAATCCAAAATCCCGAACACGCCCCTCTCTGCGGCAACAAGAGCGCGTCCAGGGTTC
GATCTGCAAGAAACC----GCAGACCTCACCATCCCCCTCCCCCCTCC------CCTCCCCAGCAGCCAGCCTCCCCCGC
GAACGAACCCTAGCCAGGCACGGCGGCGGATCCCTCGGGCGGCCCGGAGCCACAGGCCGCCGCGATGATGGA---CGGCG
GCGGCGGCGTCGGAGACCCGGTCGAGGAGTTCCTCATCGGGGGCGCCGGCGACGGCGGGGAGGACTCCCTCGCCGCCTTC
TGCGACGGAGGGTACGGACGCGGCGGCA-----------AGAGAC-CCCCTTTTTCTCCTTCTTATTCCGCTGCTGCTTG
TTAGAGCGGATGGATTCCGCTGGCTTTTGCGATTGCGCGCGCGGGATTTT---GTA---CCCTCGAGGTCGCTGTCGCCG
TGGGTTTCTTTATTGGCCGCGGGCGGCGCGGTTCTTGCCGCATCTCATCTGCGCGGCCACACGGCCT--------GCGGC
AGAGAAAGCGGGCGCTCATGCTGGT---CTCCGCGATCTCATATATAGCCTGCAACCCTGATTGATGCGAGC-TTGGCGG
AATTTGCTTTCCTCTGTTATTCTCTGCGCGAAATATGTGGCTCTAAGGCTTTAAGAACTGCTGCTATGCAATTCTGGTCA
TAGGTGATTTGGT---GATAATACCCGTGAGAAACTGGTTAACTCGTGACACGAGTCTGCAGATCTCATAGCATATGAGA
----GCAGGTTTCACTTAGTGGTTGGTGATTTTGCAGTGCCCTTCTTCTTTTAGCAATGGGCAATTGTGCACT----GAA
TGCTATGCAGCCTTCCAGGGCTCTTCTTGCCCAGTATGCACTATGTAGATTTAGAGTGATGTGACCTTCCTGGACTCCTT
GCCCAGCAT--AGATGGGAGTGATGTGCATACATATGATTCC--------------------TGTTTTGAAGGACACATC
ATTTAATATATGAGTGACATAGTCTTTTGGTGCATACTTGAGTCATTTGATT---------ATTTTTTTCTGATTGTACA
TGACTGCTGTTTATT---TGACAGACTTGGGATTGAGGATGTGCGCGGAGGTGACTCTGGTCTCGGGCACTCTAATTTGG
GGAAAAGGTGCCAGTCTTACACTTCTGATATTTCCTTACAAAAAGTGGAGTATCTTTATTGCTTAACCATGGACATATTC
CTCTGCATTTGGTTTCTTGGTAG---TATTCCATTTCCTTGCTGTTTACTCAGTACCGATAGACGATAGTGCTTTCCATG
TTCAGTCTTTACCGGCATAACAGAGGATATAGTGGACTTAAGAGCATGTGAATTGTTAATCATTACTGATCATTCTGAGC
AGTAC---------------------------------------------------------------------------
-----------CTGATTGCATAATCC--TTTTTTTCTTCTATTGTATTCTAAG---------------------------
-----CATGGTGTGACACATTATGCTTGTCTGTTATGCATGCCACTGGGTGCCATTAACACTAATGAAATATTTTGTAAC
ATGCTATGCATTTTCTTTGCTGATTTATTTCCTTAGTTAACACCATATTGGATCTTGCGATACTAACATAATAATAATTT
GATTTCGTGCAGGGGCAGAGATGAACCATCTCCATCTGGTCCAAAGTCAAAGGCTTGCCGCGAGAAAATGCGGAGGGATA
AACTGAATGACAGGTATGGGCATCTGGCAGTAGGTACTCCTAAAGCACCTCTTCCATGTAGGAAAAGGAAAAGATGCATA
TACGTGCAAACATATATTCTTTCATTCCATGCCTGTATAAACTGTGATTTTTTATCCAATTGCAGGTTTCTTGAATTATG
CTCGGTTATGAATTCTGGCAAGCACACTGGTGTTGAAGAATGTTCGGCTAGCAATCCTGGGAAGAACGCTAAGTTGGATA
AAGCAAGTATCTTGAGTGATGCAACTCGTATGTTGACACAACTCAGAGGCGAGACCGAAAAGCTGAAGGAATCAAATGTG
AATCTTCGAGAGACAATCAAGGACCTTAAGGTACCTTTGTTCACGCATCACTTTGCATCTTTTTGTTGGACTTCGAAATG
CTTGACGCCATCCACACACTTGTTTGTGGCTGTTAATGTTTTGCTCTGCCATGGAAATCCATGAGTCTTTTCTCCCCTCA
GTTCTCAGTACCGGAATT-AAAATGGCAAACTTGTTCTCACGCATTCTTCGCTGTGCCCAGTTTGACTTATGTGCAACAA
TTGGCTGACCACCAATTAAGTTACTAGATGCGACATCTTTCACCAATTCACTGACATTGCCTCCTGCCATCTGAGAATGT
TAGATCAGATAAAATTTGTGGGTTTTGTTTACAAGTGA--CTATTATTTTCCAGGCGGAGAAGAATGAGCTCCGAGATGA
GAAGTTGAGCCTGAAGGCAGAAAAGGAAAGGCTGGAACAACAACTCAAAGCAGCAAGTGCTGCTCCTACAGGATTTGCTC
CTCATATGCCTTATCCAGCTGCGTTCCACCCCGCAGTATTCCCTCCATTTGCACCACCTTATCAAGTCCCAGCCAACAAA
GGCGCTCCGGTCCCCGCTGCATTCCCTGGAATGGCGATGTGGCACTGGTTGCCCCCAACTGCCATGGACACAACTCAAGA
CCCAAAGCTTTGGCCGCCGAATGCTTAGGCGTGCCGACCCCGGGATGCTGACTTGCGCTGCCATTCGCCCATTGGCAAGT
CAGAACGTTTGTCAGGTCCCTGAGATGAAAGGAAGCTCGCGATTGCAGTTATTGTGTTTAGCCTGTTGTTTTGGGG-TCA
CTTGTCCCATAGAGAGGTGATACCTGTAATTAATCTGGATCTTAACCCTCTTGCTTGGAAAATATATTCAGTGCTACCAT
ACCTCTTGTATGAGTGTTATGTATGGAATTGCACTGGTTTGTTTCTTGAGTTTCTACCTACAAGTACCTGTGTGATGCAT
TTGGAAGTACCTGTTTTGTTTATATAAAGTTGAACATGTGAGCACTTG---AGCTGATCTTTGAAAAAAAATAGA-ATGA
CATGTAGAACC--TGTGTTCTTTCATTGACAAGATTTGTGTTTATCTTGTTACATCATTTCAAGAAGATAAATAAGTTAC
TGATATAATAAGTTGAAAAGGTTC-CT--TAATGCCCAAGCAGTACAACAATGACAAGAAAATTA---TTTTTTTAACTC
AAAACTCTACAGTTCTTTTGCCACAAAAAGGTACTTCTATTACTTCGAACAAGCACACTTCCAAGTTTGTTG--------
-------------CCCTCCACTTTTTTGGTAAGAACTTGACCAAATGTGGTACAATAGGG--------------------
--------------------------------------------------------------------------------
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------TGTAACAAAGGAACCCTGACTATGTAGGTACCACCTCCAAACTAGCAAATTAACAGCAAATTGGATAAGCCTGA
ATGGCTGATCA------TGTGTTTTGAGATAGCCTGCCTATTCTCCTTCCTATTCAGCCTTCTGTTGACCATACCGGCAC
TGAACTGGTTCCCCTTCGATGAGCTTCTCCAGGGCATCTGATGGGAGGCCGATCATCTCGAGGGTCTTCTCCCAAACAAG
CTGCGATGTTTCGAGGTTGTGTGCTTCTTCAGAGGCATTCATCGGATTACAGTCGTAGTTGATGCAAGCACAAACAGGCC
AGTCTTCAGACTTCAACGTCTCGCAGTATTCCGGAACTTGGGGGTCAGA
>chr6B_98
--AAAATTGCCTG-------------------------------------------------------------------
------------------------------ACAAACCATCGACCCAAGTCTGACCACATGGAGCACGTGGAACAGA-CAA
CGCGATAACAATCGGGGCCCACACGGCACGCAGCCCAACGACACGAGCCATCGCACGCCACCGGTTCTCCTTCCTCACTC
GCCACCCGGATAGGACCTCCAAGAAACCCCAAATCCCGAACACGCCCCTCACTGCGGCAACAAGAGCGCGTCCAGGGTGC
GATCTGCAAAAAATCGCAGGCAGACCTCACCATCCCC--------TCCCCCTCTCCTCCCCAGCAGCCAGCCTCCCCCGC
GAACGAACCCTAGCCAGGCACGGCGGCGGATCCCTCGGGCGGCCCGGAGCCAC-GGCCGCCGCGATGATGTGCGGCGTCG
GCGTCGGCGTCGGAGACCCCGTCGACGAGTTCCTCGTCGGGGGCGCCGGCGACGGCGGGGAGGAC---CTCGTCGCCTTC
TGCGACGGAGGGTACGGACGCACGCCCGCCCGCGGCGGCAGAGAC-CCATATCTGTTTCTTCTTATTCTGCTGCCT----
-------------ATTGCGTTAGCTTTTGCGATTCCGCGCGCGGGATTTTGTAGTA---CCATCGAGGTCGCTGTCGCCG
TGGAGTTCTTTATTGGCCGCGGGCGGCGCGGTTCTTGCCGCATCTCATCTGCGCTGCGCGGCCGCACGGGCTGCGGCGGT
GGAGAAAGCGAACGCTCATGCTAGTAGTCTCCGCGATCTCATATATGGTCTGCAGCCCTGGTTGATGCGAGATTTAGAGG
AATCAGCTCTTCTCTGTAATTCTCTGTGCGAAATATGTGGCTCCAAGGCTTTAAGAA---CTGCTATGCAATTCTGGTCA
TTGGTGATGTTGT---GATTATACCCGTGAGGAACTGGTTAACCCGTGGCACAAATCTGCAGATCTTATGGCATATGAGT
GTGTGCCGGTTTTGCTTAGCGATTAGTGATTTTGCGGTGCACTTCTTCTTTTAGCAATGGACAATTGTGTGCT----GAA
TGCTATGCAGCGATGCAGGGA--TTCTTTCCCAGTATGTACCATGTAGAC-TGGAGTGATGTGACCTTCCTGAGCTCCTT
GCCCAGTATGTACATGGGAATGATGTTTATAGTTATGATGATGATGATCCCAGCTGTTGGTTTGTTTTGAAGCACGCACC
ATTTAAGATACGAGTGGCATTTTCTTTTGCTGCATACTTGAGCGGATAAACTGCCCCTTGAATATTCTTCTGTTTGTACT
TGACTGATGTTTATT---TGCCAGGCTTGGGATTGAGGATGTCAGCGGAGGTGACTCTGGTCTTGGGCACTCTAATTTGG
GGAAAAGGTGCCAGTCTTACACTTCTGATATTTCTTTACAAAAAGTGGAGTATCTTTATTGCATAACCATGGAAAGATTC
CTCTGAATTTTGTTTCTTGGTAG---TATTCCATTTCCTTGCTGTTTATTCAGTACTGATAGGCGATAGTGCTTTCCATG
TTCAGTCTTTATAGGCATAACAAAGGATATAGTGGACTTAAGAGCATGTGAATTGTTAATCATTACTGATCATTCTGAGT
AGTACTCCCTCTGTAAAGAAATATTAGAGTGTTTAGATCACTACTTTATTAGTGATCAAAACGCTCTTATATTTCTTTAT
GGAGGAAGTACCTGATTGCATAATCC--TTTGTTTCTTCTACTATATTCTAAGCATGGTCTGACACATTATGCTTGTCTG
TTATGCATGCCACT---------------------------------GGTGCCATTAACACTAATGAAATATTTTGTAAC
ACACTATGCATTTTCTTTGCTGATTTATTTCCTTAGTTAACACCATACTGGATC-TGCAATACTAACATAATAATAATTT
GATTTTGTGCAGGGGCAGAGATGAACCATCTTCATCTGGTCCAAAGTCAAAGGCTTGCCGCGAGAAAATGCGGAGGGATA
AACTGAATGACAGGTATGGGCATCTGGCAGTAGGTACTCCTAAAGCACCTCTTCCATGTAGGAAAAGGAAAAGATGCATA
CACGCGCAAACATATATTCTTTCCTTCCATGTCTGTATCAACTGTGATTTTT-ATCCAATTGCAGGTTTCTTGAATTATG
TTCTGTTATGAATTCTGGCAAGCACACTGGTCTTGAAGAATGTTCGGCTAGCAATCCTGGGAAGAATGCTAAGTTGGACA
AAGCAAGTATCTTGAGCGATGCAACTCGTATGTTGACACAGCTCAGAGGCGAGACCGAAAAGCTGAAAGAATCAAATGTG
AATCTTCGAGAGACAATCAAGGACCTTAAGGTACCTTTGTTCCCGCATCACTTTGCATCTTATTGTTGGACTTCGAAATG
CTTGACGTCATCCACACACTTGTTTGTGGCTGTTAAAGTTTTGCTCTGCCATGAACATCCATGAGTCTTTTCTCCCCTCT
GTTCTTAGTACTGGAATT-AAAATGGCAAACTAGCTCTCGTACA-TCTTCGCTGCGCCCAGTTTGACTTATGTGCAACAA
TTGGCTGACCATCAATTAAGTTACTAGATGTGCCATCTTTCACCAATTCACTGACATTGCATCCTGCGCATT--------
---------------------------TTTACAAGTGGCTCTGTTATTTTCCAGGTGGAGAAGAATGAGCTCCGAGATGA
GAAGTTGAGCCTGAAGGCAGAAAAGGAAAGGCTGGAACAACAACTCAAAGCAGCGAATGCTGCTCCTACAGGATTTGCTC
CTCATATGCCTTATCCAGCTGCGTTCCACCCCGCCGTCTTCCCTCCATTTGCACCACCCTATCAAGTCCCAGCCAACAAA
GGCGCTCCGGTCCCTGCTGCATTCCCTGGAATGGCGATGTGGCACTGGTTGCCCCCAACCGCCATGGACACAACTCAAGA
TCCAAAGCTCTGGCCGCCGAATGCTTAGGCGTGCCGACCCCGGGATGCTGACTTGCGCTCCCATTCGCCCATTGGCAAGT
CAGAGCGTTCGTCAGGTCCCTGAGATGAAAGGAAGCTCGCGATTGCAGTTATTGTGTTTAGCCTGTTGTTTTGGGGGTCA
CTTGTCCCATAGAGAGGTGATACCTGTAATTAATCTGGATCTTAACCCTCTTGCTTGGAAAATATATTCAGTGCTACCAT
ACCTCTTGTATGAGTGTTATGTATGGAATTGCACTGGTCTGTTTCTTGAGTTTCTACCCACAAGTACCTGTGTGATGCAT
TTGGAAGTACCTGTTTTGTTTATATAAAGTTGAA-ATGTGAGCAGTTGC-------ATCTTTGAAAAAAACAAAATATGT
CGTGTAGAACATTTGTGTTCTTTCATTGAGAAGATTTGTGTTTATCTTGTTACATCATTTCAAGAAGATAAATAAGTTGA
TGATATAATAAGTGGAAAAGGTTCACT--TAATGCCCAAGCAGTACCACGATGACAAGAAAATTGTTTTTTTTTTAACTC
AAACTTCAGAAGTTCTTTTGCCATGAAAGGTACTT--TATTACTTCAAACAAGCACACCTCCACTTTTTTGGTAAGAACT
TCCAAGTCTGCTACCCTCCACTTTTTTGGTAAGAACTTAACCAAATGTGGTAAAATAGGTAGTAACAAAGGCGAAAATAC
AAAGGTGGACATGGTTTCATGTGCACCCATGTGAATAGTAAATTCAAAAATAATACCAAAAAAATAAAAAAATCTGAATT
TTTTGGGTATGAAACTTAGTCGACCATTCTACAAACGTGTGAAGTTTTGTGATGTATCGGCACCCATGGTATTCTTAATG
AAGAAAATACTATTGGGAACATACAATTCATCAAACAATGTTTTTTAATATAGTTTTGATTTTATCATTTTCACCCAGAT
TACCATGGATGTGATTTCTTCGTGAAACTTCATCCGTGAGTATACCAGTTGACTATGTATATTACAAAAAAAAAATTCAG
ATTTTTCATCTTTTCTAGTTTTTTTTCTATCAAATTTACGATTCATAAGGAGTGCGCGTGGAACCTATGTCCACCAAATC
CGCGTCTGTAACAAAGGTACCCTGACTATGCAAGTACAACCTCCAAACTAGCAAATTAACAGCAAACTGGATCAGGCTGA
ATGGCTGATCA------TGTGTTTTGAGATAGCCTGCCTATTCTCCTTTCTATTCAGCCTTCTGTTGACCATACCGGCAC
TGAACCGGTTCCCCTTCGATGAGCTTCTCCAGGGCATCTGACGGGAGGCCAATCATCTCGAGAGTCTTCTCCCAAACAAG
CTGCGATGTTTCGAGGTTGTGTGCTTCTTCAGAGGCATTCATCGGATTACAGTCGTAGTTGATGCAGGCACAAACAGGCC
AGTCTTCAGACTTCAACGTCTCGCAGTATTCCGGAACCTGGGGGTCGGA
>SNPs
SSSSSSSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S---S-S--S----------------------SSS-S---
------------------------------------------S-------------------------S----SS-----
-------------------S-SS----S-------S-S---S-S-------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S--------------S----------------------------------S----------------
----------------------------------------S---SS----S---------------------------SS
-SSSSSS------------------------S-SS------SS-------------SSS---------------------
------------------S--------------------S---------S------------------------------
-------------------------------S-------SS------------S--------S------S----------
S-S-S---S--------S----S----S------S--------------S--S-------SS------------------
-------------SSS------S--S-------------------S----------------------------------
-------------------------S---------S---------------------------SSSS----S-SSSS---
----------S-S-------------------S-----------------------------------------------
------------S---------------SS---S----------------------------------------------
--------------S---------------------------SS----S----S------SS-SS---------------
-S-------S-----SSS--------------------------------------------------------------
--------------------S--SS-------------------------------------------------------
-----------------------SSS--------------------------------------S---------------
---------S---S---------------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------SS------------------------S---------------------------
---------------------------------------------------------------S----------------
---------------------------------S---S------------------------------------------
--------------S-----------------------------------------------------------------
---------------------------------S----------------------------S-----------------
---------------------------------------------------------S----------------------
---S----------------------S---S-------------------------------------------------
-------------------------S-----------------------S---------------------------SS-
--------------------------------------------S----------------------------S------
-----------------------------------------------------------------S--------------
---------------S-SS-----------------------------------------------S------------S
--------------------------------------------------------------------------------
-------------S------------S-------------S---------------------------------------
------------------------------------------------------------------------------S-
----------------------S-----------S----S----------------------------------------
--S--------S--------------------------------------------------------------------
-------------------------------S---------------------------------S------------S-
SS------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
----S--------------S-----------------------------SS--------------S----S---------
--------------------------------------------------------------------------------
-------S-------------------SS-------------S--------------S----SS----------------
------------S----S--------------------------SS----------------------------------
-------------S-----------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S--------------------------------------S-
-----------SSSSSS---------------------------------------------------------------
-----S--------------------------------------------------------------------------
-----------------S------------S-----------S-------------------------------------
-------------------------------------------------
>forward_260
--------------------------------------------------------------------------------
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GCTACCCGGATAGGACCTCA------------------------------------------------------------
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>reverse_2267
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--------------------------GTGGCCTTGAAGAATGTTCGG---------------------------------
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>forward_1464
--------------------------------------------------------------------------------
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----AAGGTGCCAGTCTTACGCTC--------------------------------------------------------
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>reverse_3121
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TCGAACGTTTGTCAGGTCCC------------------------------------------------------------
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-------------------------------------------------
