>input_sequence_43156
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-------------------------------------------------------------------------ATGCCCG
TGTCAAGCGTCGCAAAACCTTTGTCCTCTAAACCAAATCCGTTCGATTCCGACTCAGACTCTGAATTTACCTCGAGGCGT
GCAAGAGCATCATCTTCCAACTCAGTTGATCCTGGCGCCAATGGCCGATACAAGAATGGCTTCCGCGATTCAGGCGGGTT
CGACAACCAATCCGTGCAAGAGCTGGAGGGCTACGTTGCACACAAGGCCGAGGAGGTCACTCAGAAAGTGAACGTCTGCC
TTCGGCTCGCTGAAAACATCAAGGAGGATGCTACCAACACTATGATCGCCCTGCACAAGCAGGGTCAACAAATGAATAGG
ACCCATGAAACCGCTGCGAACATTGATCAGGACCTTAGCAGGGTAAGCTCGAAGCCGGCAGTTTCTTTTGCACTACTGTA
CTTCTTACTGGTGTTTGAGCTCTTGGTTTT-----CCTTCTCAGAGTGAGACACTTCTGGGAAGCCTTGGAGGGTTTTTC
TCAAAAACCTGGAAGCCCAAGAAAACCAGGCAAATAAAGGGACCAGCAGTTATCTCGAGAGGTTTGCATTTTCATTGGGC
TCAAACAAGGTTGACTTTGAGTGTTCTCTTTATGCTGACATTGTTACTTATTGAAATAGATGATCCCTTCAAAAGAAGGG
CTAACCACCTAGAGCAGAGAGAAAAATTAGGATTGTCTTCAAGCCCCGTAGGGAAGTCGGATCCTCAGAAGTATTCTGAT
CCTACCAACGCCATGGAGAAGGTTCAGGTTTGTGCTGGTGCTGGGATCCATGCAGCATAAATTGGACCTAATGACTAATC
ACAAACCATTTTATTTGGCAGGTGGAGAAAGATAAGCAAGACAATGCCCTTTCTGATCTTAGCGATGTCCTGGGACAGCT
CAAGGGCATGGCTCTCGACATGGGCTCAGAAATCGATAGATACGTGCTTCATCGACTTCAGTTCACCATATCTTATTTCA
TTGGCCAACAGGGTGAGGATTCTGCCTGAAAAACATCACACCCAAGTTAAAAAGTATCCTCACCCTGTTTTCTT------
-------------------CCATGGAATTGTACAGTCCTTTCCCGGTTTGTTTGTCAGTGGGTTTGGAACAATGTTTTGA
ATGCAACACGTCTCACTGCCTTTTAAGCGCTTACAGGAAAAA-AAAT--GAGATTGCTCACCAAGTTGATGCTTTATACA
GAACAGTAAATAATGAGTGCTCTTGATTGATTGGTGTTTGTTCAGCTTAACAAACT-CCAAGAAGT--GACAATAAATTA
ATGAAACTTCACATGTATATTTGTCTTATTTTACGAAAGTAAACAGTGTCATGTTTTTAAGCTAAATGGAAATATTATTG
TGTTTATGCGTGTGTGCACAAGTAACATTATGTATGTGTGGGT------GTGGCCAAGTAACATTTTAGCGCTTAAAACA
TAACTCTAGTGCAGATAGAATCTTCGCACAAGGTCGAAAACGTGCACCGCACATGGTTTCACAAAACATGCCATTAGGGT
CTTTAAGGACAAAGAAAGAAAATAAACATTTCACCATAATCTTGTGTTCCTAGTTACCTTTTACTGAC-AAGAAAAAACA
ACTTTAAAGGAGTCCTTTTATAAAATAGATA-------------------------------------------------
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------------------------------------------------------------------------AAACAATC
TTTTCAGATTGAAATGTACAATAAAACATTCCATCAGGACTTTTTCTTCTGTTCTGTGCTTGTGCATCCTGCTGAATGGT
GTTGTATATACATACTGGAATGCAGGCAAAACAAAGCCATGGACGGTCTACAAGATGATGTGGAGGAACTCAACTCCAGG
GTGAAAGGAGCCAACCAGCGTGCACGCCGTTTGCTTGGGAAATAA-----------------------------------
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>chr2D_1_TraesCS2D01G189300
AGGACGAGGTCAAGTCATATGGCCAGAACATGACGCCGGGTAATCCGA---GATTATAAAAATGCGATTTGCGAGGCAAG
AAGG----------TCTGCAACTGTCCTGGAAGAAAAGGACATCCTCCTT-GCCTCCAACTCCAGTTCTGCCGCCCAGCC
CAGGAAAAAGCAGGCGGCCGGCAACCTCTCCGCACCCTCGTCGCGCGCCTC-------CTCTCCTCTCAGGTTCGATCCA
TTCCCTCCTTCCACCTCTATCAACTCATCGGAACTCCTTCGCCCCAGGATGCGGCTCTTCCCTACCTCAGTTCGTTCCTC
TTGCCGGTCTTCTTCCGGCAACTGCGACCCGCGCACGGCAGTTTCTCGACCCCGGTTTCTTCAGGCGACATGGGATCCTA
GACTGTTCTTTTTTAGGTGCGGGATCAGCCTGTGATTCGTGTCGTTCGTGTC--------------ACGACTGATCTTGG
GTTTCGGTCTCTGAAGACATGGTCGGTCTTTAGGATTTTTGCAGGGATGTTGTGCGATCGTCGTGCAAGCCAGGAGGAAG
TTCTTGCGCAATGTTACTTGGGTTATAACTATATATACTGCTCAAAATTATAGTAA------------------------
--------------------------------AGTACAACTGTAGAACAAATTCACGAGTTTTAACCGTTTTGATTAAGC
ATTTACCCTTTTTCTTCGAATGTCATAGATATATGGAATTGACTTATA-TTTCGAAACT---------------------
-----------------------------------------------------------------------TTTCAGGTA
TATATAGCACATCAACCCACATCCACTATTTTTACTGAGATTAAATTGAAGCTTCCGAATTTCCTAAAAATGAGAATATT
CACATGGTTTCATCGATTTAAATTTCTAGTATATATTGT---TATCTCATAGGTTTCATTCAGCGATGGCTCTTACTTTG
AGGCTTTCAGCTTTCTACTGCTCCCCT--CACTTATGAA---TTAGACGTGGAGTTCACTACTTTTATCTCTAGTAAACA
CAATCCTGAATTCCTTTCTTCAGTCTTCTTTGCATTTTA-----------------------------------------
----------------------------------------TAACTAGCTAAATCGTGGCTACGAACAGGAAAGATGCCCG
TGTCAAGCGTCGCAAAACCTTTGTCCTCTAAACCAAATCCGTTCGATTCCGACTCAGACTCTGAATTTACCTCGAGGCGT
GCAAGAGCATCATCTTCCAACTCAGTTGATCCTGGCGCCAATGGCCGATACAAGAATGGCTTCCGCGATTCAGGCGGGTT
CGACAACCAATCCGTGCAAGAGCTGGAGGGCTACGTTGCACACAAGGCCGAGGAGGTCACTCAGAAAGTGAACGTCTGCC
TTCGGCTCGCTGAAAACATCAAGGAGGATGCTACCAACACTATGATCGCCCTGCACAAGCAGGGTCAACAAATGAATAGG
ACCCATGAAACCGCTGCGAACATTGATCAGGACCTTAGCAGGGTAAGCTCGAAGCCGGCAGTTTCTTTTGCACTACTGTA
CTTCTTACTGGTGTTTGAGCTCTTGGTTTT-----CCTTCTCAGAGTGAGACACTTCTGGGAAGCCTTGGAGGGTTTTTC
TCAAAAACCTGGAAGCCCAAGAAAACCAGGCAAATAAAGGGACCAGCAGTTATCTCGAGAGGTTTGCATTTTCATTGGGC
TCAAACAAGGTTGACTTTGAGTGTTCTCTTTATGCTGACATTGTTACTTATTGAAATAGATGATCCCTTCAAAAGAAGGG
CTAACCACCTAGAGCAGAGAGAAAAATTAGGATTGTCTTCAAGCCCCGTAGGGAAGTCGGATCCTCAGAAGTATTCTGAT
CCTACCAACGCCATGGAGAAGGTTCAGGTTTGTGCTGGTGCTGGGATCCATGCAGCATAAATTGGACCTAATGACTAATC
ACAAACCATTTTATTTGGCAGGTGGAGAAAGATAAGCAAGACAATGCCCTTTCTGATCTTAGCGATGTCCTGGGACAGCT
CAAGGGCATGGCTCTCGACATGGGCTCAGAAATCGATAGATACGTGCTTCATCGACTTCAGTTCACCATATCTTATTTCA
TTGGCCAACAGGGTGAGGATTCTGCCTGAAAAACATCACACCCAAGTTAAAAAGTATCCTCACCCTGTTTTCTT------
-------------------CCATGGAATTGTACAGTCCTTTCCCGGTTTGTTTGTCAGTGGGTTTGGAACAATGTTTTGA
ATGCAACACGTCTCACTGCCTTTTAAGCGCTTACAGGAAAAA-AAAT--GAGATTGCTCACCAAGTTGATGCTTTATACA
GAACAGTAAATAATGAGTGCTCTTGATTGATTGGTGTTTGTTCAGCTTAACAAACT-CCAAGAAGT--GACAATAAATTA
ATGAAACTTCACATGTATATTTGTCTTATTTTACGAAAGTAAACAGTGTCATGTTTTTAAGCTAAATGGAAATATTATTG
TGTTTATGCGTGTGTGCACAAGTAACATTATGTATGTGTGGGT------GTGGCCAAGTAACATTTTAGCGCTTAAAACA
TAACTCTAGTGCAGATAGAATCTTCGCACAAGGTCGAAAACGTGCACCGCACATGGTTTCACAAAACATGCCATTAGGGT
CTTTAAGGACAAAGAAAGAAAATAAACATTTCACCATAATCTTGTGTTCCTAGTTACCTTTTACTGAC-AAGAAAAAACA
ACTTTAAAGGAGTCCTTTTATAAAATAGATA-------------------------------------------------
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------------------------------------------------------------------------AAACAATC
TTTTCAGATTGAAATGTACAATAAAACATTCCATCAGGACTTTTTCTTCTGTTCTGTGCTTGTGCATCCTGCTGAATGGT
GTTGTATATACATACTGGAATGCAGGCAAAACAAAGCCATGGACGGTCTACAAGATGATGTGGAGGAACTCAACTCCAGG
GTGAAAGGAGCCAACCAGCGTGCACGCCGTTTGCTTGGGAAATAATATTGCCTCGAAAATGTATGAGTGCAGTCTTGGTA
TGTGAGGTTGCAGAATCAAAACATGGCTGCTGCTGCTGCCGCTGCCTTGCTAAGCATACCCTTGTAACTTCTCTTGGGAA
GGAAAAGTATCCTTGCAAGTTGCAACATTGCCCCCAAAATACGTATGTGGTGC--ACACATATAATCATCTATTTTCCAT
A-GTTTGTGATCAACCAAATTGCTCAGAGATTTTGAAAGCAACATCAACTATCTGTATTTGTACAAAGATTTGTAGTT--
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-----------------------------------------------------------------------TTCT--GTC
T-------------------------------------------------------------------------------
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---------------------------------------------------TTCGAAATTCAACATAGAAAAACCCTCGG
CTTTCCATAGTTGACACATGCCACTCATAAATTGTGATCCACATATAATGTTTAAAAAATGTTCATTCAACT-----ATT
GACGAGTTTAAGCTTGGTTCCTAAACTCCAAAATCTAACAACTTAACTCTTAACTTTCAGTACCACAATACTTTGGTCTC
TCACCCAGGTCAAACCAGTATGACTTGTGACGTGGAGGTGATTTGGAACAA--GATGTAACA--------TAGTATATGA
TCATTTGGAGTCAAGTGTGGAAGCAAACTTGCATGAAAGTAAAGTGAGTAAGGCACATATACTGCAATTACAAGGAGTCT
ATTGTTGGCACATTGTTGGCGGAAGCTTGGCAGTCATATTTCAACACCTTCAGTAGTGTG-TTGATGTTTAAACTAGTGT
GTGATGGCATGAACATAGCAGCACTCTAGGTTGGCACTAGGTGTTCAAACCGGTTTAGCATTGTGAACTTAGGGCATCTC
CAAACGACGTCCCACGAATTTCATCAAACACGATGGTATTAACTAAAATTCAGACGTGTATATATAAGGGACAGTATTCC
ATCCGTTTAACTTAAACTTTTAAAAAACTAGACCTAGTACGCGTGGTCAACCTGGCCAGCGGCACCGTAGTCGTCCCTCG
TCGAAGTGCTCCCTCCAGCGGCGGAAGGGCACGGTGAGGAGTCATTCTGCTTCTCCTGCTCCGTGCGGA
>chr2A_1
AGGACGAAGTCAAGTCATA--GCCACAACATGATGCCAGGCAATCCAA---GATTATAAAAATGCGATTTGCGAGGCAAG
AACGA----TGTCATCTGCGACTGTCCTGGAAGAAAAAGACATCCTCCTTTGCCTCCAACTCCAGTTCTGCCGCCCAGCC
CAGGAAGAAGCAGGCGGCCGGCAACCTCTCCGCACCCTCGTCGCGCGCCTCCTCTCTCCTCTCCTCTCAGGTTCGATCCA
TTCCTTCCTCCCACCTCTCTCGACTCATCGGAGATCCTCCGCCCCAGGATGCGGCTTTCGCCTACCTCAGTTCGTTCCTC
TTGCCGGTCTTCTTCCGGCGACGGCAACTCGCGCCGGT-GGTTTCTCGACCCCGGTTTTTTCAGGCGGAACGAGGCGACA
TGAGATCC-----------------CAGACTGTGATTCGTGTCGTTCTTGTGGGCGTCGACGAGTAACGACTGATCTTGG
GTTTTGGTGTCTGAAGACATGGTCATTCTTTAGAATTTTCGCAGGGATGTTGTGCGATCGCCGTGCAA------------
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------------------------------------------------------------------CGTTTTGATTAAGC
ATTTACCCTTTT-CTTCGAATGTCATAGATAGGTTTTGGACCACATCCACTATCTTTACTGAGATTAAATTGAAGCTTCT
GAATTTCCTAAAAATGAGAATATTGACATGGTTTCATCGATTTGAATTGACAGCACTTTTTGCTAGTATCTTTTCAGG--
TATATAGCACATCAAACCACATCCACTATCTTTACTGAGATTAAATTGAAGCTTCTGAATTTCCTAAAAATGAGAATATT
CACATGGTTTCATCGATTTGAATTGACAGCACTTTTTGCTAGTATCTCATAGGTTTCATTCAGCGATGTTTCTTAGTTTG
AGGCATTCAGCTTTCTACTGCCCTCCT--CACTTATGAATTTTTAGACGTGGAGTTCACTACTTTTATCTCCAGTAAATA
CAGTCTTGAATTCCTTTCCCCAGTCTTCTTTACATTC-------------------------------------------
----------------------------------------TAACTAATCAAGTTGTGGCTACAAACAGGAAAGATGCCCG
TGTCAAGCGTCGCAAAACCTTTGTCTTCTAAACCAAATCCATTCGATTCAGACTCAGACTCTGAATTTACCTCGAGGCCT
ACAAGAGCATCATCTTCCAACTCAGTTGATCCTGGTGCCAATGGCCGATACAAGAATGGGTTCCGCGATTCAGGCGGATT
CGACAACCAATCCGTGCAAGAACTGGAGGGCTACGTTGCACACAAGGCCGAGGAGGTCACTCAGAAAGTGAGCGTCTGCC
TTCGGCTCGCTGAAAACATCAAGGAGGATGCTACCAACACTATGATCGCCCTGCACAAGCAGGGTCAACAGATGAATAGG
ACCCATGAAACCGCTGCGAACATTGATCAGGACCTTAGCAGGGTAAGCTCGAAGCCGGTAGTTTCTTTTGTA-----GTA
CTTATTACTTGTGTTTGAGCTGTTGTTTTTTTTTTCCTTCTCAGAGTGAGACACTTCTAGGAAGCCTTGGAGGGTTCTTC
TCAAAAACCTGGAAGCCCAAGAAAACTAGGCAAATAAGGGGACCGGCAGTTATCTCTAGAGGTTAGCACTTTCATTTGGC
TCAAACAAGGTCGACTTTGAGTGTTCTCTTTATGCTGACATTCTTACTTATTGAAATAGATGATTCCTTCAAAAGAAGGG
CTAACCACCTAGAGCAGAGAGAAAAATTAGGATTGTCTTCAAGCCTCAGAGAGAAGTCGAGTTCTCAGACGTATTCGGAT
CCTACCAACGCCATGGAGAAGGTTCAGGTTTGTATTGGTGCTGGGATCCATGCAGCATAAATTGGACCTAATGACTAATC
ACAAACCATTTTATTTGGCAGGTGGAGAAAGATAAGCAAGACAATGCCCTTTCTGATCTTAGCGATGTCCTGGGACAGCT
CAAGGGCATGGCTCTAGATATGGGCTCAGAAATCGATAGGTACGTGCTTCGTCGACTTCAGTTCACCATCTCTTATTTCA
TTGGCCAACAGGGTGAGGATTCTTCCTGAAAAACATCGTACCCAAGTTTAAAAGTATCCTCACCCTGTTGTCAAGCACTA
TATTCCTTCGATGAAATGGCCATGGAATTGTATAGTCCTTTCCCGGTTTGTTTATCAGTGGGTTTGGAACAATGTTTTGC
ATTCAACACGTCTCACTGCCTTTTAAGCACTTACAGGAAAAG-AAA-TGGAGATTGCTCACCAAGTTG-TGCTTTATACA
GAACAGTAAATAATGAGTGCTCTTGATTGATTGGTGTTTGTTCATCTTAACAAACT-CCAAGAAGTCTGACAATAAATTA
ATGAAACATCACATGTATATTTGTCTTATTTTACGAAATTAAACAGTGTCATGATTTTAAGCTAAATGGAAATATTATTG
TGTTTATGCTTGTGTTCACAAGTAACATTATGCAT------GT------ATGGCCAAGTAAGATTTTTGCGCTTAAAACA
TAGAGT--------------------------------------------------------------------------
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------AAGGATTCCTTTACAGTTGTTTTTTTCTTGGTCACTAAAAGGTACTCCCTCCGTCCCAAAATTCTTGTCTTAGA
TTTATCTAAATACGGATGTATCAAGTCATGTTTTAGTATTAGATACACCCGTATCTAGACAAATCTAGGACAAGAATTTT
GGGACGGAGGGAGTAATTAGGAACACAAGATTAAGGTGAAATATTTTCTTTCTTTCTTTGTCCTTAAAGACCCTTTTTTT
TGCGGGGGGTTGTCCTTAAAGACCCTAAGGCCTTGTACAATGGTAGGTGCTTAGAGGAGGTGCTTAGAGAAATAAATCAG
GCTTTCCTTAAGCACCAGTGCCTATTTGTACAGGGTAGACGCTTAACTAAGCATCTCTCATGTAAAAATAAGCACTGGTG
CTTCAGAAAAATCCGGTTTATCTTTCTAAGCACCTCCCTAAGCACCTACCATCGTACAAGGCCTAACGGCATGTTTTGTG
AAACCATGTGTGGTGCACGTTTTCGACCTTGTGTGAAGACCCTATCTGCACTAGTGTTATGTTATAGAACTGAAACAATA
TTTTCAGATTGTAATGTACAATAAAACATTCCATCATGACCTTTTCTTCTGTTCTGTGCTTGTGCATCCTGCTGAATGGT
GT------------------TGCAGGCAAAACAAAGCCATTGACGGTCTACAAGATGATGTGGAGGAACTCAACTCCAGG
GTGAAAGGAGCCAACCAGCGTGCACGCCGTTTGCTTGAGAAATAATATTGCCTCGAAAATGTATGATTGCAGTCTTGGTA
TATAAGGTTGCAGAATCAAAACAT------TGCTGCTGCTGCTGCCTTGCTAAGCATACCCTTGTAACTCCTCTTGGGAA
GGAAAAGTATCCTTGCAAGTTGCAACATTGCTCCCAAAATACATATGAGGTGC--ACATATATAATCATCTATTTTCAGT
A-GCTTGTGATCAACCAAATTGCTCAGAGATTTTGAAAGCAACATAAACTATCTGTATTTGTACAAAGATTAGTATTAA-
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---------------------------------------------------------------------------TTACT
CCCTCTGATCCAAAATAAATGTCATGGTTTTAGTACA-------------------------------------------
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----------------------------------------------ACTTATTTTGGATCGGAGGGAGTAGTTTT--GTC
T-------------------------------------------------------------------------------
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---------------------------------------------------TTTAAAATTCAACATCGAAAAACCCTCGG
TTTTCCATAGTTGACACATGCCGCTCATAAATTGTGATCCACATATAATGTTTAAAAAATGATCATTCAACT-----ATT
GACGAGTTTAAGCTTGGTTCCTAAACTCCAAAATCTAACAACTTAACTCTTAACTTTCAGTACCACAATACTTTGGTCTT
TCACCCGGGTCAAACCAGTATAACTTGTGAC-------------------------------------------------
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---------------------------------------------------------------------
>chr2B_12
-----------AAGTCATATGGCCAGAACAT-ACGCCGGGTAACCAGAGGGGATTATAAAAATGCGATTTGCGAGGCAAG
AAGGATGTCTGTCATCTGCAACTGTCCTGGAAGAAAAGGACATCCTCCT-TGCCTCCAACTCCAGTTCTGCCGCCCAGCC
CAGGAAGAAGCAGGCGGCCGGCAACCTCTCCGCACCCTCGTCGCGCGCCT-------CCTCTCCTCTCAGGTTCGATCCA
TTCCTTCCTTCCATCTCTCTCAACTCATCGGAACTCCACCACCCCAGGATGCGGCTCTTGCCTACCTCAGTTCGTTCCTC
TTGCCGGTCTTCTTCCGGCGACGGCGACCCTCGCACGGCGGTTTCTCGACCCCGGTTTCGTCAGGCGGAACGAGGCGACG
TGGGATCC-----------------CAGGCCGTTATTCGTGTCGTTCGTGTC--------------ACGACTGATCTTGG
GTTTCGGTCTCTGAAGACATGGTCGGTCTTCAGGATTTTTGCAGGGATGTTGTGCGATCGTCGTGCAAGCCC-------G
TTCTTGTGCAATGTTACCTGGTCTATAACTATATATACTGGTCAAAATCATAGCACCCCTGTAAAGAAATATAAGGGCGT
TTAGATCACTACTTATATTTCCTTACGGAGGGAGTACAGGTGTAGAACAAAGTCACG---------CGTTTTAACTAAGC
ATTTACCCTTTTTCTTGGAATGTTGTAGATAGATGCAACTGATTTTGATTTTCGAAACA---------------------
-----------------------------------------------------------------------TTTCAGG--
TATATAGCAAATCGACCTGCATCCACTATTTGTACTGAGATTAAATTGAAACTTCTGAATTTCCTAAGAATGAGAATATC
CACATGGTCTCACAGATTTGAATTTCCAGTACTTTTTGCTGTT---TCATAGGTTTCATTCAGCGACGTTTCTTAGTTTC
AGGCTTTCAGCTTTCTACTGCTCCCATGCCAATTATGAA---TTAGACGTGGAGTTCACCACTTTTATCTCCAGTAAACA
CAGCCCAGTATTCCTTTCTTCAGTCTACTTTACATTCTACTCCCTCCGTCCCATAATATAAGAACGTTTTTCACACTAGT
TTAGTGTTAAAAACGTTCTTATATTTTGGGACAGAGGGAGTAACTAATTAAGTTGTCGCTACGAACAGGAAAGATGCCCG
TGTCAAGCGTCGCAAAACCTTCGTCAGCTAAACCAAATCCATTCGATTCCGACTCAGACTCTGAATTTACCTCGAGGCCT
GCAAGAGCATCATCTTCCAACTCAGTTGATCCTGGTACCAATGGCCGATGCAAGAATGGCTTCCGCGATTCAGGCGGGTT
CGACAACCAATCCGTGCAAGAGCTGGAGAGCTATGTTGCATACAAGGCCGAGGAGACCACTCAGAAAGTGAACGTCTGCC
TTCGGCTCGCTGAAAACATCAAGGAGGATGCTACCAACACTCTGATCGCCTTGCACAAGCAGGGTGAACAGATGAATAGG
ACCCATGAAACTGCTGCGAACATTGATCAGGACCTTAGCAGGGTAAGCTTGAAGCCGGCAGTTTCTTTTG--------TA
CTTATTACTTGTGTTTGAGCTCTTGTTTTTTTTTTCCTTCTCAGAGTGAGACACTTCTGGGAAGCCTTGGAGGGTTCTTC
TCAAAAACCTGGAAGCCCAAGAAAACCAGGCAAATAAAGGGACCAGCAGTTATCTCGAGAGGTATGCCTTTTCATTGGGC
TCAATCCATGTTGACTCTGAGTGTTCTCTTTTTCCTGACATTGTTACTTATTGAAATAGATGATCCCTTCAAAAGAAGGG
CTAACCACCTAGAGCAGAGAGAAAAATTAGGATTGTCTTCAAGCCCCAGAGGGAAGTCGAATCCTCAGACGTATTCTGAT
CCTACCAACGCCATGGAGAAGGTTCAGGTTTGTGTTGGTGTTGGGATCCATGCAGCATAAATTGGACCTAATGACTAATC
GCAAACCATTTTGTTTGGCAGGTGGAGAAAGATAAGCAAGACAATGCCCTTTCTGATCTTAGCGATGTCCTGGGACAGCT
CAAGGGCATGGCTCTCGATATGGGCTCAGAAATCGATAGGTACGTGCTTCGTCGACTTCAATTCACCATATCTTATTTCA
TTAGCCAACAGGGTGAGGATTCTGCCTGAAAAA-ATCGCACCCAAGTTAAAAAGCATTCTCACCCTGTTGTCAAACACTA
TATTACTTCGATGAAATGGCCATGGAATTGTACAGTCCTTTCCTGGTTTGTTTATCAGTGGGTTTCGAACAATGTTTTGC
ATTCAACACGTCTCACTGCCTTTTAAGCGCTTACAGGAAAAA-AATTTGGAGATTGCTCACCAAGTTGATGCTTTATACA
GAACAGTAAATAATGAGTGCTCTTGATTGATTGGTGTTTGTTCAGCTTAACAAACTCCCAAGAAGTCTGACAATAAATTA
ATGAAACATCACATGTATATTTGTCTTATTTTACGAAATTCAACAGTGTCATGATTTTAAGCTAAATGGAAATATTTTTG
TGTTTATGCTTGTGTGCACAAGTAACATTATGCAT------GTGTGGGTGTGGCCAAGTAACATTTTAGCGCTTAAAACA
TAACACTAGTGCAGATAGGGTCTTCGCACAAGGTCGAAATCGTGCAACACACATGGTTTCGCAAAACATGCCGTTAGGGT
CTTTAAGGACAAAGAAAGAAAATAAACATAACACCATAATCTTGTGTTCCTAGTTACCTTTTACTGACCAAGAAAAAACA
ACTGTAAAGGAATCCTTTTATAGAATAGATA-------------------------------------------------
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------------------------------------------------------------------------AAACAATC
TTTTCAGATTGAAATGTACAATAAAACATTCCATTAGGACTTTTTCTTCTGTTTTGTGCTTGTGTATCCTGCTGAATGGT
GTTGTATATACATACTGGAATGCAGGCAAAACAAAGCCATGGATGGTCTACAAGATGATGTGGAGGAACTCAACTCCAGG
GTGAAAGGAGCCAACCAGCGTGCACGCCGTTTGCTTGGGAAATAATATTGCCTCGAAAATGTATGAGTGCAGTCTTGGTA
TATGAGGTTGCAGAATCAAAACAT------TG---CTGCTGCTGCTTTGCTAAGCTTACTTTTGTAACTTCTCTTGGGAA
GGAAAAG-----TTGCAAGTTGCAACATTGCTCCCAAAATACATATGAGGTGCACACATATATAATCATC-TATTTTCCC
TGGTTTGTGATCAACCAAATTGCTCAGAGATTTTGAAAGCAACATCAACTATCTGTATTTGTACAAAGATTAGTATTAAC
TAGCAAAAGAGCCCGTGTGTTGCAACGGGAGAGTAAATAACACATGTTCTTAACCCAATGACCATGACTCAAGACCCTAA
TGTGTTCACGTCCTTTATTTTCACATAGCATCATATTTGTGTTGTTGATGGTGGTCTGAGTGCTCACACAACGAAAGCGT
GTTTGAATGCGGTCAGTTCTAAGGCGTCTCTCTCGCACGCACACTCGCGTGAAATAAAATAAGAAATATGTTATTTTTCC
CCACGAGGTTTTTCACAGGTGTACATGCGTGGTTATCGATGTTTCCTTTCCTCTCTATCAGTAAGAAAGAAAAACGGATC
GTACATTATAGATTAAGTTCACACCAAAATAATATTTTAGAAATATTTAACAGATAAAAATAGCATCATATTTAGATTGT
ACACATTTTTCTAACCAAGTTTCATATATAACATGTTAAAATCGGAATTACGGTTTAAAAGATATTGATGATTTTGTTTT
AGATAAACTGTGGATTGATTAACCAAAAAGTTAGGGGGTTTTATGTTAAAACGAAAAATGAGTCGATTGAATTAAATATG
GACAACGGGTTGATTACCTAAAATATTAGGTTTTTTTGAGAAAATGCAAAAAAAGGGTTCGGGAGTGACTTAAACGTGTA
CCACAGGTTTATTTATGGAAAATAGAGGGGCTTTTTTGCAAAATATATGACGGACGATCCCAATTTGCTTTATTATTACT
CCCTCCGTTCCTAAATATTTGTCTTTCTAAAAATTTCAACAAGTGACTACATACAAAGCAAAATGAGTGAATCTACACTT
TAAAATATGTCTATATACATCCATATGTGGTAGTCCATTTAAAATCTATACGAAGACAAATATTTAGGGACGAAGTGAGT
ATTAGGTAAAGATCACTCCCTCCGATCCAAACACTAAAACAATGTCACTTATTTTAAACCGGAGGAAGTAGTTTTTGACC
TTTTAAAATTGAGGTAATATCACTGCTAGTCACTGAACTTGCGTCGGATTGCACTTTGGTGCTAAAGGTGCAAAACTGCA
AATACGATCACTCCGGCTGTTTACGCCATGCCACGCAGGCACAAACCCTTGTCAGTGACAGATATCGACGCGCGCACATT
TTTTTATTTTGCACAGTAGCCCTTAAATTTATTAATTATGAACAAAGGCCCTCAAATTAAAAAAAAAAAGGCTGCAGTTG
TTGGGTTTGAATCCACTACCACCAAATAACGAGCTAACCACTACACCAAGTAACTATTTGTGCTAAAAATGAGAAAAGCT
GAATTTTATGTTTTTGCAATGGCGACTACTCATATCCAAATAATTTTTGTCTAACCAAATTTCCATTAAGAGAAAAAATT
GAGCGCCCGGAATTTTGAATTTAAGTGAGAGAAACTAGTCTAACAATACATGAACATAACTTAAATCCTCATATGGGCAT
ACAATATCAGACCCTCTTTTGGGAAATAATTTTTTGTGTTATTCATGCTCATTTTAAAAGAATTACATTATTTAAAATAG
TGTTCTCGGTGCCGCAACAATGAATTGGACTCGCGACGTTTCTATAGAAAGGAGTCGGGCTGACACTGCACAGGAAGCAC
TTATTTAAAGTAATGTGCTAAACTAAATATATTTATGCGTTAAAAGTTAAATTCGAAATTTTGGGCAAAGAAACCTGGAA
TTGCTGAGATATTTCAAAAATCGGATTTTGCAACTCCTTCAAAAAAAAACCCAGAGTAAAATAAAACTTGCTCGTGAACA
AGTTTGTGTACGTTTTGGGTTAAACTTACATTTTGACGTGTGTTTTATAATCGAATTTCATTTGAAAATTTCTGGCGGAA
AGACTATTTGGAAACCTATTTTTCTGGCCAAACCCGGGAAAATAGAATCGAGAAAAAAATGTGAGTTCAGCATAAAAGCA
AATATATCTTCACAAATGCATGAAATTATGCTTGATGGAGTGGTTCGCTAGTGTGTACATGTATATGAAGTCGCGAGTTT
GAACCTCGATCACACCCTTTTAATTTCTCATTTCTCGCACCAATTTGTTTCACTCGCTGACAGTGGGCCATAGCCCCATT
GGCATGCCATGTAAGCGCGGGATACAGATGAAGTGACCGTGTTTACACGAGATGACAAGTTATGTAACCACAATTCCGTA
TTGTACAAGTTTTGTAACCAAACTAAATATCGAGCACAAGTTGTATGACTCTTTGAAATTCAACATCGGAAAACCCTCGG
CTTTTCATAGTTGACACATGCTGCTCATAAATTGTGATCCACATATAATGTTTAAAAAATGATCATTCAACTTAACTATT
GACGAGTTTAAGATTG----------------------------------------------------------------
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>chr2A_980
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----------------------------------------------------TCGTGGCTACAAATAGGAAAGATGCACG
TGTCAAGCGTCGCAAAACCTTTGTCTTCTAAACCAAATCCATTCGATTCTGACTCAGACTCTGAATTTACCTCGAGGCCT
GCAAGAGCATCATCTTCCAATTCAGTTGATCCTGGTGCCAATGGCCGATACAAGAATGAGTTCCACGATTCAGGCGGGTT
CGATAACCAATCCGTGCAAGAGCTGGAGGTCTACGTTGCATACAAGGCCGAGGAGACCACTCAAAAAGTGAACGTCTGCC
TTCGGCTCGCTGAAAACATCAAGGAGGATGCTACCAACACTATGATCGCCTTGCACAAGCAGGGTCAACAGATGAATAGG
ACCCATGAAACTGCTGCAAACATTGACCAGGACCTTAGCAGGGTAAGCTCGAAGCCGGCAATTTCTTTTGTA-----CTA
CTACTTACTGGTGTTTGAGCGTTTTTTTTCTTTT--CTTGTCAGAGTGAGACACTTCTGGGAAGCCTTGGAGGGTTCTTC
GCAAAAACCTGGAAGCCCAAGAAAACCAGGCAAATAAAGGGATCATCAGTTATCTCGAGAGGTTTGCATTTTCATTGGGC
TCAAACAAGGTTGAGTT---GTGTTCTCTTTGTGCTGACATTGTTACTTATTGAAATAGATGATTCCTTCAAAAGAAGGG
CTAACCACCTAGAGCAGAGAGAAAAATTAGGATTGTCTTCAAGCCCCAGAGGGAAGTCAGATCCTCAAAAGTATTCTGAT
CCTACCAACGCCATGGAGAAGGTTCAGGTTTGTGTTGGTGCTGTTATCCATGCAGCATAAATTGGACCTAATGACTAATC
ACAAACCATTTTATTCGGCAGGTGGAGAAAGATAATCAAGACAATGCCCTTTCTGATCTTAGCGATGTCCTGGGACAGCT
CAAGGGCATGGCTCTCGATATGGGCTCAGAAATCGACATGTACGTGCTTCGTCAACTTCAGTTGCTC------TATTTCA
TTGGCCAACAGGGTGAGGATTCTGCCTGAAAAACATCGCACCCAAGTTAAAAAGTATCCTCACCCTATTGTCAAACACTA
TATTACTTCGATGAAATGGCCATGGAATTGTACAGCCCTTTACCAGTTTGTTTATCAGTGGATTTGGAACAATGTTTTGC
ATTCAACATGTCTCACTGCCTTTTAAGCGCTTACAGGAAAAATAAA-TGGAGATTGTTCACCAAGTTGATGCTTTATATA
GAACAGTAAATAATGACTGCTCTTGATTG----GTGTTTGTTCAGCTTAACAAACT-CCAAGAAGTCTGACAATAAATTA
ATGAAACATCACATGTATATTTGTCTTATTTTACGAAATTAAACAGTGTCATGATTTTAAGCTAAATGGAAATATTATGG
TGTTTATACTTGTGTGCACAAGTAACATTATGCAT------CTGTGGTTGTGGCCAAGTAACATTTTAGCGCTTAAAACA
TAACGCTAGTGCAGATAGGGTCTTCACACAAGGTCGAAAACATGCACCGCACATGGTTTCACAAAACATGATGTTAGAGT
CTTTAAGGAC----------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>chr2A_2490
--------------------------------------------------------------------------------
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----AAGGACAAAAAAAGAAAATAAACATTTCACCATAATTTTGTGTTCCTAGTTACCTTTACTGGCCA---AAAAAACA
ACTGCAAAGGAATCCTTCTATAGAATAGATA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------AAACAATC
TTTTCAGATTGAAATGTATAATAAACCATTCCATTACGACGTTTTCTTCTGTTCTGTGCTTGTGCATCCTGCTGAATGGT
GTTGTATATACATACTGGAATGCAGGCAAAACAAAGCCATGGACGGTCTACAAGATGACGTGGAGGAACTCAACTCCAGG
GTGAAAGGAGCCAACCAGCGTGCACGCCGTTTGCTTGGGAAATAATATTGCCTCGAAAATGTATGATTGCAATCTTGGTA
TGTAAGGTTGCAGAATCAAAACAT------TGTTACTGCTGCTGCCTTGCTAAGCATACCCTTGTAACTTCTCTT-GGAA
GGAAAAGTATCCTTGCAAGTTGCAACATTGCTCCCAAAATACATATGAGGTGC--ACACATATAATCATC-ATTTTCGGT
A-GCTTGTGATCAACCAAATTGCTCAGAGATTTTGAAAGCAACATAAACTATCTGTATTTGTACAAAGATTAGTATTAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------TTACT
CCCTCCGATCCAAAATAAATGTCATGGTTTTAGTACA-------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ACTTATTTTGGACCGGAGGGAGTAGTTTTTTGTC
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------TTTGAAATTCAACATCAAAAAACCCTCGG
TTTTCCATAGTTGACACATGCCGCTCATAAATTGTGATCCACATATAATGTTTAAAAAATGATCATTCAACT-----GTT
GACGAGTTTAATCTTGGTTCCTAAACTTCAAAATCTAACAACTTAACTCTTAACTTTCAGTACCACAATACTTTGGTCTT
TCACCCGAGTCAAACCAGCATGACTTGTGACGTGGAGGTGATTTGGAACAAAGGATGTAACATGGTATATTAGTATATGA
TCATTTGAAGTCTGGTGTGGAAGCAAACTTGCAAGAAAGTAAAGTGAGTAAGGCACAAATACTGCAATCACAAGGAGTCT
ATTGTTGGCACATAGTTGGCGGAAGCTTGGCAGTCATATTTCAACACCTTCAGCAATGAGTTTTATGTTTAAACTAGTGT
GTCATGGTATGAACATAGTAGCACTCTAGGTTGGCACTAGGTGTTCAAAC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>SNPs
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
----S-------------S-------------------S--------------------S--------------------
-------------------S--S----------------S---------------------------SS-S-S-SSSSS-
SSSSS-S-SSSSSSSSSSSSSSSSS---S---------------------------------------------------
-----------------------------------------------------------------------SSSSSSSS-
------S----------S---SS-----------------S-------S----S-S------------------------
--------------------------------------SS-----------S-----SSSSSSSSS--------------
-------------------------------S---S--S---S--SS-----------S---------------------
------------------------------------------------------------------------------SS
-------------------------------------------------------S------------------------
-------------------S------S----SS-S---S-----------------------------SS-----S----
-----------------------------------------------------------------------S--------
--S----------------------------S----S-------------------------------------------
----------------------------------------------SS---S----------------------------
-------------------------S--------------S-------------------------------------S-
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
----------------------------------------------------------------------S-SSSSS---
-------------------------S--------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------SS-------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
------------------S--------------------S----------S-----------------------------
-------------------------------------S-------------------------------S--SS------
-----------------------------------------------------S-------------------------S
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------S--------------S--------------------------
---------S----------------------S--SSSSSS---------------------------------------
----S-------------SS----------------------------------------------------S-------
--------------------------------------------------------------------------------
---S-------S----------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------SSSSSS---------S----------------------------------------
-------------------------------S----------S----S------------------------------S-
-----------------------------------------------------------------------S---S-S--
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S------------S-------------
----------------------S--------------------------------------S------------------
-------------------------------------------------------------------------------S
------S-------------------------------------------------------------------------
-------S----SS-------------------S-----------------------S----------S-----------
-------------S---------------------------------------S-S--S----S----------------
--S----S----------S-------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_567
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AGCCAGGAGGAAG
TTCTTGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>reverse_2673
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------TATGTGTGGGTGTGGCCAAG----------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>forward_1671
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------AAGCCGGCAGTTTCTTTTGC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>reverse_3720
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------CGCTGCCTTGCTAAGCATAC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
