>input_sequence_43017
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-------------ATGCCGAGGCCATACTCCAGGACACCCTCCTCCACGTCCCAGCCGAGGAGGGCATCCCCTTCGCCCA
CCCCTTCCCCGGCCACCGCGCCCAGGCCCAAGAACCCCGGCGCCGCGGCGCAGCGCCGCCGCAGCCCCCTGTCGGACCTC
AACTCCGGGGACGCCTCCGCCGCGCGGGCCGGATGCTTCCGCTTCCTCCTCTCCTCCGCATCGGGCTCCAAGCCGCGGTG
CGCGTCCACCCCGAGGACCCCCGCGTCCGGCCCGATGCCCCGCGCGGAGACCAAGAGGCGCGTGGCGGGCGCTGGCCGTC
TGCCGGATCAAGAGCCGAGGGCCAAGGCGGAGCAGGGGCCGGATCGTGAACCCAGAAGACGGAGGGACGAGCCGATCGGT
TGTCGGATCAGGAGGGTGGAGCCGGAGAAGAAGCAGCAGGGGCTGGCGAGGAGGCAGCAGCAGCAGGAG------CACCT
CGAGGCCCTGACGCCGGAGAGGAAGGCGGACGCGGGGTCCAACCCGTCCTCTGGAGCGACGCCCCCGATCCACGCGTCGA
TCTCGCCGGAGGTGCTGGCCGGCGGCGCCGCGACGCCGGCGTGCTTCGCGGCCGGGCACCACGTCGTGCCAGGCGTCCGC
GACCGGCGCAAATGCCGGGCGAGGGGCATCCTTGACATCGCCG------------GCGAGG------------AGCTCGA
CTGTGAGCCGTCCCGGGCGTCGATCCACTGGCTGTCCTCGCCATCGGGGGAGGCCGGTACGTGTTCGACGAAATGCGGAA
AGGAGGCGTCAGTCATCTGGCTGTCATCTCCACGCGATGAAGGTGCCGCGTGTTTGTTCGACGAAGAGATCTTCCTGCCG
AGATGCTCATCGGAGGACCCATTCTGGCAACTCTCCCCGGACTGCACGG---------GGCTGTTGGGGTCGCCGGTCCT
TGGAGGTCTGCTCGATTTTGACACGCCGGCGTCGGAATTGTCCGAAACGACACCGTCATCCGGGTTTCTTCCGGTGCAGA
GGACGCCGAGCACTGGTGACAGCATTAGCCCCTTCTCGCTTATTGTGAAGAAGGCATCATCGCATTCCTCTAGGCTAAGC
TCCTTGTGTGCCCAGCGAGGACTGGGCAGCAGCTATGGCTACGATTCGGCAACAGATCCGACACGGGTCTCTGGTGAGTC
ATGGTCTGAAAACGGCAGCACAGGCAAGTGTTCAGGGTTAGCGAGGGTTAGCAGTCGCCCACTAACGAGGATGGATCCAG
TGGTAGAGTGCCTCGAGATGATGAGTTTGTCCCCAAGGCCTGGGGATGCTGATTATGATCAAAATGATGAAGATGGTGCC
CTGCCTGCTACATTGCCTGAGCTCAGCTTCCAGTTTGCTGGTGCTTCGACGCCTCTGGAATCCATAGACTTGAGCTCTTT
CAAGAGATCTCCTTGTGACACAGAATTGAAGGGGAAGGAGGCAAGTTTCCGGAAGCCGGCATCAACCGAGGCTCGGATAT
CTTGGCGAGAAGGGCTAGTTAGCAGAATATTCGATATGGGTGACTTGGATTGCTGCCAATGGTTATCTGATGATGAAGAT
GGACCACTTATCCCGGGCAATGTCGAGGCGTTGCCCGATACAGTTTTGCAGCCAGGTAGCGCTTGTTGCCTGCAGGAGGA
TAGCAAGCAATCCGGCTTCGGCTCTGTCGAGTTTGGTTGCAGTGATGGTGGATTAAATTATGACAGTA---AGGCTACTC
CAAACCCTGTTCAAGTAGCAGAGTCTATGAGAGCAGAAGGATTCGAGCTCGTCTCGTCCGATGACTCGGATTGGACTCTC
TTGTACAAGAATGGCTTGTTTGAAACATGA--------------------------------------------------
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>chr4B_1_TraesCS4B01G087100
AGGCCCGCGCTGGACGGCGCCGACGTCGACCCGAGCCACCTCGTTCGCGTATTCTTGGAGCTGTGGCTGGTCGATTTACA
TGAAATTAATTCCCTCAGTTCTGGTGGCAAATATAATACACATAATTCATATTGTTATGCACTAGCGTGTATGTGTGAAA
TAGATGGATTATGGTCCCGTACCCAATAAGATGGATATGTGTGTGTGTTAGAGAGAGAGGGAGAGGGGGATAGAGAGTGG
GGAAGAGGGAGGGAGAGTGTGTGTGTGCGTGAGGATTTGATGGTAAAAAAGGTCGTCAATGTCGTAATATTGAACTCTTA
AAGTTAATGTGGCCCCGTTGCAACGCATGGGCGTTCTTCTAGTGTGAAGTTAGATAC-----------------------
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TCTCTTTGGCCCTTT-TACTCCGCATATGAGATTTGTCTGAAGTCAAACTTCATAAAGGTTGA-CAATTTTATAGACAAA
AAC--ATCAACATTCTCAATACAGAATCAATATCATTAGATGCATCAAATTTAATGTTCATATTCATGTTGTATTAACTT
TAGTATAGTAGATGCTGATATTTTTTGAAAGCAATATAATATACATAAGTACA-CATCTGTAAAGAAATACTCCGTATGA
GATTT---------------------------------------------------------------------------
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----TTTTTAAGATCACTATATATTAGTGATATTTTGGATCATAC--ATTTCATTTCTTTATGGAGGAAGTATATAA---
-TATTAAATACTCGTAGATAAATCATGCCATCTCTTGGAGTATAGTACAGTATTAGTGTGAGAATAAACATAGTACAACA
ATAATTTACTACTACAAATAATCAAAA-AATAGTCAATGCGTCGTCATCGGCCCAATCACCGTTACAGCAAA-----TTG
AATGGTTCGAGGGCTCAGTTTACGGACGCAGATCTCGACA-CCCCTCTCCTCTCTCCTCCAACGG---------------
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--------------------------------------------------------------CTCTCTCCTCCTCCTGTC
CAAACCCCGATGACATCGCCCCATTAGCCCCATTCCATCCTCCATCGCCGCCGCGCACC-------CTGCCCAC------
---CGCCGTCGCCATGCCGAGGCCATACTCCAGGACACCCTCCTCCACGTCCCAGCCGAGGAGGGCATCCCCTTCGCCCA
CCCCTTCCCCGGCCACCGCGCCCAGGCCCAAGAACCCCGGCGCCGCGGCGCAGCGCCGCCGCAGCCCCCTGTCGGACCTC
AACTCCGGGGACGCCTCCGCCGCGCGGGCCGGATGCTTCCGCTTCCTCCTCTCCTCCGCATCGGGCTCCAAGCCGCGGTG
CGCGTCCACCCCGAGGACCCCCGCGTCCGGCCCGATGCCCCGCGCGGAGACCAAGAGGCGCGTGGCGGGCGCTGGCCGTC
TGCCGGATCAAGAGCCGAGGGCCAAGGCGGAGCAGGGGCCGGATCGTGAACCCAGAAGACGGAGGGACGAGCCGATCGGT
TGTCGGATCAGGAGGGTGGAGCCGGAGAAGAAGCAGCAGGGGCTGGCGAGGAGGCAGCAGCAGCAGGAG------CACCT
CGAGGCCCTGACGCCGGAGAGGAAGGCGGACGCGGGGTCCAACCCGTCCTCTGGAGCGACGCCCCCGATCCACGCGTCGA
TCTCGCCGGAGGTGCTGGCCGGCGGCGCCGCGACGCCGGCGTGCTTCGCGGCCGGGCACCACGTCGTGCCAGGCGTCCGC
GACCGGCGCAAATGCCGGGCGAGGGGCATCCTTGACATCGCCG------------GCGAGG------------AGCTCGA
CTGTGAGCCGTCCCGGGCGTCGATCCACTGGCTGTCCTCGCCATCGGGGGAGGCCGGTACGTGTTCGACGAAATGCGGAA
AGGAGGCGTCAGTCATCTGGCTGTCATCTCCACGCGATGAAGGTGCCGCGTGTTTGTTCGACGAAGAGATCTTCCTGCCG
AGATGCTCATCGGAGGACCCATTCTGGCAACTCTCCCCGGACTGCACGG---------GGCTGTTGGGGTCGCCGGTCCT
TGGAGGTCTGCTCGATTTTGACACGCCGGCGTCGGAATTGTCCGAAACGACACCGTCATCCGGGTTTCTTCCGGTGCAGA
GGACGCCGAGCACTGGTGACAGCATTAGCCCCTTCTCGCTTATTGTGAAGAAGGCATCATCGCATTCCTCTAGGCTAAGC
TCCTTGTGTGCCCAGCGAGGACTGGGCAGCAGCTATGGCTACGATTCGGCAACAGATCCGACACGGGTCTCTGGTGAGTC
ATGGTCTGAAAACGGCAGCACAGGCAAGTGTTCAGGGTTAGCGAGGGTTAGCAGTCGCCCACTAACGAGGATGGATCCAG
TGGTAGAGTGCCTCGAGATGATGAGTTTGTCCCCAAGGCCTGGGGATGCTGATTATGATCAAAATGATGAAGATGGTGCC
CTGCCTGCTACATTGCCTGAGCTCAGCTTCCAGTTTGCTGGTGCTTCGACGCCTCTGGAATCCATAGACTTGAGCTCTTT
CAAGAGATCTCCTTGTGACACAGAATTGAAGGGGAAGGAGGCAAGTTTCCGGAAGCCGGCATCAACCGAGGCTCGGATAT
CTTGGCGAGAAGGGCTAGTTAGCAGAATATTCGATATGGGTGACTTGGATTGCTGCCAATGGTTATCTGATGATGAAGAT
GGACCACTTATCCCGGGCAATGTCGAGGCGTTGCCCGATACAGTTTTGCAGCCAGGTAGCGCTTGTTGCCTGCAGGAGGA
TAGCAAGCAATCCGGCTTCGGCTCTGTCGAGTTTGGTTGCAGTGATGGTGGATTAAATTATGACAGTA---AGGCTACTC
CAAACCCTGTTCAAGTAGCAGAGTCTATGAGAGCAGAAGGATTCGAGCTCGTCTCGTCCGATGACTCGGATTGGACTCTC
TTGTACAAGAATGGCTTGTTTGAAACATGAGGTTAGAGGGTTATATCCTTGTTCAGATGTTGTGTAC-------------
----------------------------------------------------------------------TACTAGTTAG
TTTATGTCAGGAGGAAGCACATGATTTTGGGATCTTGTGTTTGCCCCTCCCAGCCTTGTATACTTATTTTAGAGATATGA
GTTCATCTTT-ATCTTTTTCCGGCAGCGCATGTAAATATTATTGTTGGCAGATGAACATTTGTTTCTGGAATATAATCAC
TCCTGGTTCATTTTGGAACCCAGTGAGCTCACAGTTCAGAGTACCATGAGTATGG--------CAGCAGCCACTGGCTGG
GTGGCATTCGACATGTAATTCTTCTGAACAAGTACGCACGAGAAAGCAGTAATCTGGAGTTTACGGTGTTCTGATATTCT
GATATTCTTGGAAGAACATCACAG--------------------------------------------------------
-------TCCTTCATAAACTTGTTTGTCTAAAATT---------------------------------------------
------------------CAGTATCTGCGTCCT-GAGGTTCTTGGAAGAACACACCCACACATCATGGTTTGTTCTCTTG
ACAGACATGCATTGGGATCCGGGAGCGGGAGGTCCTGAGGCGCCTTGAGGTTTCTCCCACTGGTTTCATTTCTGAAAGAA
ACCTGAAGTTTGCTCCTACCCAGTTCAGTTCCATATAAAATGAAAGGGTTTGTACTGT---TTTTTTTTATTGAGTTG--
-------------------------------GGGTTCGTCCTGTGATGATGTGCAGAAATTGTACGGTGGTTTGCATCAG
GTACCCAACAAATTTGGTGAAAC-GGACAAATTTGACCCTTTTCTAAAACTTCAGCAAAAAATAAATCAAATCCGCACAA
AATTCACAAAATGACCCTTTTACTCGACGCCCCGGGTTGGGGTGCCATGCT--------------CCTGGCCTGAGGTGT
CATGCTTGATGGCGCGGCGGCTACCTCGACAAAGGGCGTCAATGCTATCTGGCACGACATTTCAGGTTCAGGCGTCATGA
AAAAAAAGGTCATTTTGTGAAAAATATTTTCAGATCCGGTTCATTCTGTGCTGAGTTTCAGAGATCAAATCTGTCCGTTT
TCTCACACAAATTTGCACAA
>chr4D_365
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--------------------------------------------TGATGTTAGATAT-----------------------
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TCCCTCTGGTCCTTTTTACTCCGCACATGTGATTTGTCAGAAGTCAAACTTTATAAAAGTTGACCAATTTTATGAAGAAA
AAAGTATCAACATTCATAATACAGAATTAATATCATTAGATGCGTCAAATTTAATTTTTATA------TTGTATTAACTT
TAATGTTGTAGATGCCTATATTTTTT-AAACCAATATACTACATATAAGTACTCCATCTGTAAAGAAATATAAGA-----
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----TTTTTTAGATCACTACATATTAGTGATCTTTTGGATCATATATATTTC-----TTTACAAAGGAAGTATATAATAC
GTATTAAATACTCGTAGATAGATCATGCCATCTCTTGGAGTAT-----AGTATTAGTGTGAGAATAAACATAGTACAACA
ATAATTAACTACTACAAATAATCAAAA-AATAATCAATGCGTCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCTCTCT---CTCCTCCTGTC
CAAACCCCGATGACATCGCCCCATTAACCCCATTCCATCCTCCCTCGCCGCCGCGCCGCGCCTCGACTGCCCACCGC---
---CGCCGCCGCCATGCCCAGGCCATCCTCCAAGACACCCTCCTCCACGTCCCAGTCCAGGAGGGCCTCCCCTTCGCCCA
CCCCTTCCCCGGCCACCGCGCCCAGGCCCAAGAACCCCGGCGCCGCGGCGCAGCGCCGCCGCAGCCCCCTGTCGGACCTC
AACTCCGGGGACGCCTCCGCCGCGCGGGCCGGATGCTTCCGCTTCCTCCTCTCCTCCGCCTCGGGCTCCAAGCCGCGGTG
CGCGTCCACCCCGAGGACCCCCGCGTCCGGCCCGATGCCCCGCGCGGAGGCCAAGAGGCTCGTGGCGGGTGCCGGCCGTC
TGCCGGATCAGGAGTCTAGGGCCAGGGCGGAGCAGGGGCCGGGTCGTGAACCCAGAAGACGGAGGGACGAGCCGATCGGT
TGTCGGATCAGGAGGGTGGAGCCGGAGAAGAAGCAGCAGGGGCTGGCGAGGAG---GCAGCAGCAGGAG------CACCT
CGAGGCCCTGACGCCGGAGAGGAAGGCGGACGCGGGCTCCAACCCGTCCTCTGGAGCGACGCCCCCGATCCACGCGTCGA
TCTCGCCGGAGGTGCTGGCCGGCGGCGCCGCGACGCCGGCGTGCTTCGCGGCCGGGCACCACGTCGTGCCAGGCGTCCGC
GACCGGCGCAAGTGCCGGGCGAGGGGCATCCTTGACATCGCCG------------GCGAGGGCACCAGCGAGGAGCTCGA
CTGTGAGCCGTCCCGGGCGTCGATCCACTGGCTGTCCTCGCCATCGGGCGAGGCCGGGACGTGTTCGACGAAATGCGGAA
AGGAGGCGTCAGTCATCTGGCTGTCATCTCCACGCGATGAAGGTGCGGCGTGTTTGTTCGACGAAGAGATCTTCCTGCCG
AGATGCTCATCGGAGGACCCATTCTGGCAACTCTCCC---------CGGACTGCACGGGGTTGCTGGGGTCGCCGGTCCT
CGGAGGTCTGCTGGATTTTGACACGCCGGCATCGGAATTGTCCGAAACGACACCGTCATCTGGATTTCTTCCGGTGCAGA
GGACACCGAGCACTGGTGACAGCATTAGCCCCTTCTCGCTTATTGTGAAGAGGGCATCATCGCATTCCTCTAGGCTAAGC
TCCTTGTGTGCCCAACGAGGACTGGGCAGCAGCTATGGCTACGATTCGGCAACAGATCCGACACGGGTCTCTGGTGAGTC
ATGGTCGGAAAATGGCAGCACAGGCAAGTGCTCAGGGTTAGCGAGGGTTAGCAGTCGCCCACTAACAAGGATGGATCCGG
TGGTAGAATGCCTCGAGATGATGAGTTTGTCCCCAAGGCCCGGGGATGCTGATTATGATCAAAATGATGAAGATGGTGCC
CTGCCTGCTACATTGCCTGAGCTCAGCTTCCAGTTTGCTGGTGCTTCGACACCTCTGGAATCCATAGACTTGAGCTCTTT
CAAGAGATCTCCTTGCGACACAGAATTGAAGGGGAAGGAGGCAAGTTTCCGGAAGCCGGCATCAACCGAGGCTCGGATAT
CTTGGCGAGAAGGGCTAGTTAGCAGAATATTCGATATGGGTGACTTGGATTGCTGCCAATGGTTGTCTGATGATGAAGAT
GGACCACTTATCCCGGGCAATGTCGAGGCGTTGCCCGATACAACTCTTCAGCCAGTTAACGCTTGTTGCCTGCAAGAGGA
TAGCAAGCAATCTGGGTTCGGGTCAGTCGAGTTTGGTTGCAGTGGTGGTGGATTAAATTATGACAGTAGTAAGGCCACTC
CAAGCCCTGTTCAAGTGGCAGAGTCTATGAGAGCAGAAGGATTCGAGCTCGTCTCGTCCGATGACTCGGATTGGACTCTC
TTGTACAAGAATGGCTTGTTTGAAACATGAGGTTAGGGTTATCCTTGTC---TCAGATGTTGTGTAC-------------
----------------------------------------------------------------------TACTAGTTAG
TTTATGTCAGGAGGAAGCACATGATTTTGGGATCTTGTGTTTGCCCCTCCCAGCCTTGTATACTTATTTTCGAGATATGA
GTTCATCTTTTATCTTTTTCCGGCAGCGCATGTAAATATTATTGTTGGCAGATGAACATTTGTTTCTGGAATATAATCAC
TCCTGGTTCATTTTTGAACCAAGTGAGCTCACAGTTCAGAGTAACATGAGTATGG--------CAGCAGCCACTGGCTGC
GTGGCATTCGACATGTAATTCTTCTGAACAAGTACGCATCAGAAAGCAGTAATCTGGAGTTTATGGTGTTCTGATATACT
GATATTCTTGGAAGAACATCACAG--------------------------------------------------------
-------TCCTTCATAAACTTGTTTGTCTAAAATTCAGTATCTGCGGATATTCTTGGAAGAACATCACAGTCCTTCATAA
ACTTGTCTGTCTAAAATTCAGTATCTGCGTCCT-GAGGTTCTTGGAAGAACACACCCACACATCATGGTTTGTTCTCTTG
ACAGACATGCATTGGGATC------CGGGAGGTCCTGAGGCGCCTTGAGGTTTCTTCCACTGGTTTCATTTCTGAAAGAA
ACCTGAAGCTTGCTCCTACCCAGTTCAGTTCCATATAAAATGGAAGGGTTTCTCCTGTAAATTCTTTTTATTGAGTTGGG
GTTCGTCCTACTCGCAAAAAAAAAGAGTTGGGGGTTCGTCCTGTGATGATGTGCAGAAATTGTACGATGATTTGCATCAG
GCACCCAACAAATTTGGTGAAAATGGACAAATTTGACCCTTTTTTAAAACTTCAGCAAAAAAAAAATCAAATCTGCACAA
AATTCATAAAATGACCCGTTAACCCGTCGCCGCGGGCTGGGATGCCATGCTAGATAACATGTCACCCTGGCCTGAGGCAG
CATGCTTGATGGCGCGGCAGCTACCTCGACAAAGGGCGTCAATGCTATCTAGCATGACATTTCAGGTTCAGGCGTCATGA
AAAAAA-GGTCGTTTTGTGA-AAATATTTTCAGATCCGGTTCATTCTGTGCTGAGTTTCAGGGATCAAATCTGTCCGTTT
TCTCGCACAATTTTGCACAA
>chr4A_373
TTTGTCTGAAGTCAAACTTCATAAAGGTTGACCGATTTTATGAAGAAAAACATCAACATGCCCAATACAGAATCAATATC
ATTAGATGCGTCAAATTTAATTTTCATGTTGTATTAACTTTAGTATAGTAGATGCTGATATTGTTGAAAGCAATATAATG
TACATAAGTACACATCTATAAAGAAATACTCCCTCCCTCTGAAGAAAAACTTGTCCATCAAATGAATATATCTAGCACCA
AGTTAGTGCTAAATACATCCATTTGAGAGACAAGCTCGAGACAAACTTTTTCGGACGGAGGGAGTACGATATTTTTTTAG
ATCATTATATATTAGTGATCTTTTGGATCACACATTTCTTTATGGAGGAAGTATATAATATTAAATACTCATAGGTAAAT
GGAGTATAGTATTAATGTGAGGAAAATATAGTACAATAATAATTTACTACTACTACAAATAATCAAAAAATAGTCAATGC
GTCGGCATCGGCCCAATCATCGTTACAGCAAATTGAAAACTTCGAGGACTCAGTTTACGGACGTAGATCTCGACACCCCT
CCCCCCTCCTCCCTCCAACGGCTCTCTCCTCCTGTCCAAACCCCGATGACATCGCCTCACTAACCCCATTCCATCCTCCA
TCGCCGCCGCCCGCTTGCCCACCGCCGTCGCCGCCATGCCCAGGCCATCCTCCAAGACACCCTCATCCACGTCCCAGCCG
AGGAGGGCCTCCCCTTCACCCACCCCTTCCCCGGCCATCGTGCCCAGGCCCAAGAACCCCAGCGCCGTGCCGCCGTAGCC
CCCTGTCGGACCTCAACTCCGGGGACGCCTCCGCCGCGCGGGCCAGATGCTTCCGCTTTCGCTTCCTCCTCTCCTCCGCC
TCGGGCTCCAAGCCGCGGTGCGCGTCCACCCCGAGGACACCCGCGTCCGGCCTGATGCCCCGGGCGGAGGCCAAGAGGCG
CGCGGTGGGTGTTGGCCGCCTGCCGGATCAGGCGTCGAGGGCCAAGGCAGAGCAGTGGCGGGATCATGAACCCGGAAGAA
GGAGGGACGAGCCGATCGGTTGTCGGATCAGGAGGGTGGAGCCGGAGAAGAAGCAGCAGGGGCTGGCGAGGAGGCAGCAG
CAGGAGGAGCACCTCGAGGCCGTGACGCCGAAGAGGAAGGCGAACGCGGGGTCCAACCCGTCCTCTGGAGAGACGCCCCC
GAGCAACTTATTCTTCTATTGCATGCAACGATGCACATAAACATGATATCAACAAAGTTTTTTATTTTCTTTTGGCGGCT
TGATATCAACAAAGATCTTAAATTTGAATTAAAAATGTTTTATCTCCTAAAGCACCTCTTTCAACTTTAACTTTCTCGTG
GCAACATCTTTTAGACTAAATTCCACGTTGGTATGTTTCTACAACTTTTTTTGCTGGTACTTAGATTATTATTACTCATC
GAGTTATTAGCTAGTTAGTTGGCGGATTAAATTTACTTAGTTGTATGATTGCGAAAGTCAATATAGCCTAGATGGTCTAT
GGATATGAATGTGATTTTTATTGTTTCTGTGTTCTTTTACTGCCATGGCATTATGAATAAATATATAAGAAATTTTCTCA
CCCAAAATATGACTTGCTTCATGGTACTTGTTTGAGTTGATACCTCGCCATTATGAAATTAAATGTAATTAATACAATGA
ATGTTATTTGCAAGATTAATCGTAATTAAAGTTATTTTCAAATTGTTGGTGATGCGGTGAATGGAGTACATCATTGATAC
TCTCTTTGGTCCTTTCTACTCCGCATATGAGATTTGTCTAAAGTCAAACTTTATAAAGGTTGACCAATTTTATGGAGAAA
AAC--ATCAACATTCTCAATACAGAATCAATATCATTAGATGCGTCAAATATAATTTTCATG------TTGTATTAACTT
TAGTATAGTAGATGCTGATATTGTTTGAAAGCAATATAATGTACATAAGTACA-CATTTGTAAAGAAATACTCCCTCCGT
CTGAGAAAAAAACTTTGTCTGAAGTCAAACTTCATAAAAGTTGACCAATTTTTTGGAGAAAAACATCAACATGCCCAATA
CAGAATCAATATCATTAGATGTGTCAAATTTAATCTTCATGTTGTATTAACTTTAGTATAGTAGAGGCTGATATTGTTGA
AAGCAATATAATGTGCATAAGTACACATCTATAAAGAAATACTCTCTCCGTCTTAAAAAAACTTGTCCATCAAATGAATA
TATCTAACACTAAGTTAGTGCTAGATACATCCATTTGAAAGACAAGCTTGAGACAAACTTTTTCGGACGGAGAGAGTATG
AGATTTTTTTAGATCACCGTATATTAGTGATCTTTTGGATCATAC--ATTTC-----TTTATGGAGGAAGTATATAA---
-TATTAAATACTCGTAGATAAATCATGCGAT-------AGTAT-----AGTATTAGTGTGAGAATAAGTATAGTACAACA
ATAATTTACTACTACAAATAATAAAAATAATAATCGATGCGCCGTCATCGGCCCAATCGCCGTTACAGCAAAACAAATTG
AATGCTTCGAGGGCTCAGTTTACGGACGCAGATCTCGATACCCCCCCCCCCCTCTCCTCCAACGG---------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------CTCT---CTCCTCCTGTC
CAAACCCCGATGACATCGCCCCATTAACCACATTCCATCCCCCCTCGCCGCCGCGCGCC-------CTGCCCACCGCCGT
CCTCGCCGCCGCCATGCCCAGGCCATCCTCCAAGGCACCCTCCTCCACGTCCCAGCCGAGGAGGGCCCCCCCTTCGCCCA
CCCCTTCCCCGGCCACCGCGCCCAGGCCCAAGAACCCCGGCGCCGCGGCGCAGCGCCGCCGCAGCCCCCTGTCGGACCTC
AACTCCGGGGACGCCTCCGCCGCGCGGGCCGGATGCTTCCGCTTCCTCCTCTCCTCCGCCTCGGGCTCCAAGCCGCGGTG
CGCGTCCACCCCGAGGACCCCCGCGTCCGGCCCGGCGCCCCGGGCGGAGGCCAAGAGGCGCGTGGCGGCCGCTGGCCATC
TGCCGGATCAGGAGTGGAGGGCCAAGGCGGAGCAGGGGGCGGATCGTGACCCCAGAAGACGGAGGGACGAGCCGATCGGT
TGTCGGATCAGGAGGGTGGAGCCGGAGAAGAAGCAGCAGGGGCAGGCGAGGAG---GCAGCAGCAGCAGGAGGATCACCT
CGAGGCCCTGACGCCAGAGAGGAAGGCGGACGCGGGGTCCAATCCGTCCTCCGGAGCGACGCCCCCGATCCACGCTTCGA
TCTCGCCGGAGGTGCTGGCCGGCGGCGCCGCGACGCCGGCGTGCTTCGCGGCCGGGCACCACGTCGTGCCAGGCGTCCGC
GACCGGCGCAAATGCCGGGCGAGGGGCATCCTTGACATCGCCGGCGAGGGCACCAGCGAGG------------AGCTCGA
CTGTGAGCCGTCCCGGGCGTCGATCCACTGGCTGTCCTCGCCATCGGGCGAGGCCGGTACGTGTTCGACGAAATGCGGAA
AGGAGGCGTCAGTCATCTGGCTGTCATCTCCACGCGATGAAGGTGCCACGTGTTTGTTCGACGACGAGATCTTCCTGCCC
AAATGCTCATCGGAGGACGCATTCTGGGAACTCTCCC---------CGG---------GGCTGTTGGGTTCGCCGGTCCT
TGGAGGTCTGCTGGATTTTGACACGCCGGCGTCGGAATTGTCCGAAACGACACCATCGTCCGGATTCCTTCCGGTGCAGA
GGACACCGAGCACTGGTGACAGCATTAGCCCCTTCTCGCTTATTGTGAAGAGGGCATCATCGCATTCCTCTAGGCTAAGC
TCCTTGTGTGCCCAGCGAGGACTGGGCAGCAGCTATGGCAACGATTCGGCAACAGATCCGACACGGATCTCTGGCGAGTC
ATGGTCTGAAAATGGCAGCACAGGCAAGTGCTTAGGGTTAGCGAGGGTTAGCAGTCGCCCACTAACGAGGATGGACCCAG
TGGTAGAATGCCTCGAGATGATGAGTTTGTCCCCAAGGCCCGGGGATGCTGATTATGATCAAAATGATGAAGATGGTGCC
CTGCCTGCTACATTGCCTGAGCTCAGCTTCCAGTTTGCTGGTGCTTCGACACCTCTGGAATCCATAGACCTGAGCTCTTT
CAAGAGATCTCCCTGTGACACAGAATTGAAGGGGAAGGAGGCAAGTTTCTGGAAGCCGGCATCAACCGAGGCTTGGATAT
CTTGGCGAGAAGGGCTAGTCAGCAGAATATTTGATATGGGTGATCTGGATTGCTGCCAATGGTTGTCTGATGATGAAGAT
GGACCACTTATCCCGGGCAATGTCGAGGCGTTGCCCGATACAGCTTTGCAGCCAGGCAGTGCTTGTTGCCTGCAGGAGGA
TAGCAAGCAATCTGGCTTCGGCTCCGTCGAGTTTGGTTGCAGTGACGGTGGATTAAATTATGACAGTAGCAAGGCCACTC
CAAACTCTGTTCAAGTGGCAGAGTCTATGAGAGCAGAAGGATTCGAGCTCGTCTCGTCCGATGACTCGGATTGGACTCTC
TTGTACAAGAATGGCTTGTTTGAAACATGAGGTTAGAGGGTTATATCCTTGTTCAGATGTTGCGTACTACTCCCTCTGTA
AACTAATATAAGAGCGTTTAGATAACTAAAATAGTGATCTAAATGCTCTTATATTAGTTTACGGAGGGAGTACTAGTTAG
TTTATGTCAGGAGGAAGCACATGATTTTGGGATCTTGTGTTTGCCCCTCCCAGCCTTGTATACTTATTTTCAAGATATGA
GTTCATCTTT-ATCTTTTTTCGGCAGCGCATGTAAATATTATTGTTGGCAGATGAACATTTGTTTCTGGAATATAATCAC
TCCTGGTTCATTTTAGAACCCAGTGAGCTCACAGTTCAGAGTAACATGAGTATGGGCGTATGGCAGCAGCCACTGGCTGG
GTGGCATTCGACATGTAATTCTTCTGAACAAGTACGCATCAGAAAGCAGTAATCTGGAGTTTACGGTGTTCTGATATTCT
GATATTCTTGGAAGAACATCACAGTCCTTCATAAACTTGTTTCTCTAAAATTCAGTATCTGCGGATATTCTTGGAAGAAC
ATCAGAGTCCTTCATAAACTTGTTTGTCTAAAATTCAGTATCTGCGGATATTCTTGGAAGAACATCACAATCCTTCATAA
ACTTGTTTGTCTAAAATTCAGTATCTGCGTCCTTGAGGTTCTTGGAAGAACACACCCACACGGCATGGTTTGTTCTCTTG
ACAGGCATGCATTG----------------GGTCCTGAGGCGCCTTGAGGTTTCTTCCATTGGTTTCATTTCTGAAAGAA
ACCTGAAGTTTGCTCCTACCCAGTTCAGTTCCATATAAAATGAAAGGGTTTGTCCTGTG-ATTTTTTTTATTGAGTTGGG
GTTCGTCCT-----------------------------------------------------------------------
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--------------------
>SNPs
SSSSS-SSSSSSS-SSSSS-SS-SSSSSSSS-SSSSSSSS-SSSSSSSSSSS--SSSSS--SSSSSSSS-SSSSSS--SS
SSS-SS-SSS--SSSSSSSSS-SSSSSSSSS---S-SSSSS-SS--SSSSSS--S-SSSSSSSSSSSSSSSSS-S-S-SS
--S--SSS-SSSSS--SSSS-SSS----SSSSSSSSS-S--SSSSSSSSSSS-SSSSSSSS-SSSSSSS--SS--SSSSS
S-SSSSS-SSSSSSSSS-SSS-S--S-S-SS-S-S-SSSSSSSS-SSSSSSSSSSSSS-S-SS---SS--SSSSS-S-SS
-SSS-S--S-SSSSSS-S-SSSSS-S--SSSSSS-S-SS-SS-----S--------S-----------------------
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---------S-----------------------------------------S---------------------S--S---
-------------------------------------------S-----------S------SSSSSS------------
--------------------------------------------------------------------------S-SS-S
SSSSS---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------S---------------------S--------------------SSSSS-----------------------
-------------------------------------------SSSSS--------------------------------
--------------------------------S-------------------------S---------------------
----S---------------------------------S------S-S--S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------SSS-----------
--------------------------S----------------S------------S-----------------------
--------S---------S-------S-----S---------------------------------S-------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
-------------------------------------------------S------------------------------
----------S---S-----------------------------------------------------------------
-----------------------------------------------------SSS------------------------
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--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
-------------------------------------SSSSSSSSS----------------------------------
------------S--------------------------------------------------S----------------
----S----------------------------------------------S----------------------------
--------------------------------------------------------------------------------
------------S-----------------S-------------------------------------------------
-------S--------------------------------S---------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
-------------------------------------------S------------------------------------
------------S-----------S--------------------------------------------------S----
----------------S---------------------------------------------------------------
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----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------S----------------------------S------------------------------------
--------------------------------------SS----------------------------------------
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-------------------SSSSSS------------------------------S------------------------
-----------------------------------------------------S--------------------------
------------------------------------------------------------------S--S----------
-S--------------------S--------------------S------------------S----------S------
------S----------S--S--S--S----S----S----S-----------------------------------SSS
------------------S-------------------------------S---S-------------------------
------S----S--------S----------------------------------------S------------------
----S-----S---------
>forward_2924
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TAGCCCCATTCCATCCTCCA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------
>reverse_3984
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------GTTTCTTCCGGTGCAGA
GGA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------
>forward_3878
--------------------------------------------------------------------------------
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------------------CCATTCTGGCAACTCTCCCC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------
>reverse_5135
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------GGAACCCAGTGAGCTCACAG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
