>input_sequence_42939
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------ATGGGCA
ACTCGTGCCACGGCTCCATCGTTCCCGCGGCCGGTGACGGCCGCCACCACTACCGCACCAGCTGCAGCAGCTCCGACTGG
GACTCCGACTCCTCCTCCCCCGTCGTCGACCGCGCGCCGCACCGCAACACCATCATGGGCCGCGGCGCCGGCCACCAGCA
CCAGCTCTCCTCCCCGACGGCCGTGATGGGCCACCAGACCCCGCTCCTGCGCGACCTCTACAACGTCGGCCGCAAGCTCG
GGCAGGGCCAGTTCGGCACCACCTACCTCTGCACCGAGATCTCAACCGGCGTGGACTTCGCCTGCAAGTCCATCGCCAAG
CGCAAGCTGCTGACCCCGGAGGACGTGGAGGACGTGCGGCGCGAGATCCAGATCATGCACCACCTTGCCGGCCACGACAG
CGTGGTCACCATCAAGGGCGCGTACGAGGACGCGCAGTTCGTGCACATCGTCATGGAGCTCTGCGAGGGCGGCGAGCTCT
TCGACCGCATCGTCCAGCGCGGATACTTCTCCGAGCGCCGCGCCGCCGAGATCGCCCGCGTCATCGTCGGCGTCGTCGAG
GCCTGCCACTCGCTCGGGGTCATGCACCGCGACCTCAAGCCCGAGAACTTTCTCTTGAAAGACAAGGAGGAGAATAA---
------CAACAACAACAATGGCTCCGGCAA------------TAGTGTTAATGAACCGGCGGGCGACAAGGTCAACCTCA
AGGCCATCGACTTCGGCCTCTCCGTCTTCTTCAAGCCCGGCCAGATCTTCACCGACGTCGTGGGCAGCCCCTACTACGTC
GCGCCCGAGGTGCTCTGCAAGCACTACGGCCCCGAGGCCGACGTGTGGACCGCCGGCGTCATCGTCTACATCCTGCTGTC
CGGCGTGCCGCCCTTCTGGGCCGAGACGCAGCAGGGCATCTTCGACGCCGTGCTCAAGGGCGCCATCGACTTCGACTCCG
ACCCGTGGCCCAACATCTCGGACGGCGCCAAGGACCTCATCCGGAAGATGCTCAAGTCGCCGCCGGCGGAGCGGTTCACG
GCGCACCAGGTAACCAGAGATTCTTGTGAAAAGTTTTGTG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TGAAACCAAAAGTCATAATTAAAGGAGCAGGTCTT
GTGCCACCCATGGATCATTGAGAACGGCGAGGCCCCCGACGCGCCGCTGGACCCTGCCGTGCTCTCCAGGCTCAAGCAGT
TCTCGGCCATGAACCGGTTGAAGAAGATGGCTTTACGTGTGATCGCGCGCGGGCTGTCAGAGGAGGAGTTGGCCGGGCTC
AAGGAGATGTTCAAGACCATGGACACAGACGGCAGCGGTGCCATCACATTCGAGGAGCTCCGGGAGGGGCTGCGCCGTTA
CGGGTCCACAGAGCTCAGGGACTCGGAGGTGCGGGACCTCATGGAGGCAGCTGACGTGGACAACAGCGGCACCATCGATT
ACGACGAGTTCATCGCCGCCACCGTGCACATGAACAAGCTGGACCGCGAGGAGCACCTCATGGCGGCCTTCTCCTACTTC
GACAAGGACGGCAGCGGGTACATCACCGTCGATGAGCTGGAGGTGGCGTGTCGCGAGCACAACATGGCCGACGTCGGCAT
CGACGACATCATCAGGGAGGTCGACCAGGACAACGTGAGTACTC------------ATTAATCTATCTTATGTTACTGAT
TACAAATTTGAATTGAAACTTGAATGGCTCAAATGCAGGATGGTCGGATCGACTACGGGGAGTTCGTGGCCATGATGAAG
AAGGGGATCATCGGCAACGGCAGGCTTACCATGAGGCACACCTCCGACGGTAGCATCCTCCATGGAGCAGGCAGCGGCCT
CAGCAGCTAG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr6A_1_TraesCS6A01G421000
TCCTTGGAGTCAGTTCTCTCTTGTTACCTTAGTTTTGATCATGAATTTGTAGGCTGAGCAGACTGTGAACCGACCCTTTC
TATTCAGATGCCATGCCCAAAAGTCTAAAATACATACGAGTACTACTACTACTCTCTCGGGTCTTTTTACTTGGCATATA
TATAAG--ATTTGTCAGAAATCAAACTTTGTAAAGTGTTGCCATATTTATATTGAAAAATATCAACATTTATAATACTAA
AGTTATACAATATGTAAATTAAATTCATAAGACGCACCTACTAATAATATAAGTAATACTGATCACGTG--TTATGAATG
TTGATATATTTTCTCTACAAAATTAATTAAACTATTTAAGGTTTGACTTGAGACAAATTTTATATATATCCAGAGTAAAA
AAAGATCCGGGGAATACTACT---GTATGAAGCCCGGCCGCGACGTGCAGTGAAGTTACGTGAGATTTTTACGTAAAGGC
TGACTTGGTGGCAGTTAATTGGATTAGGATTAGTGGCTGGGGCCCACCCAGTTAATTGAAGGAAAGTTAGGTAAGTCTTG
GTAAGCTCGTTCGTAGGTGTAGCATTATTGAGGGAGGGATGCACGACGTTGAGGAGAGGAGAGACTGCTACTGCAGCTAG
CACGTACGTGGTGCCGCACCTACTA----ATGCCAGGCGGCATGCACGTAGTCGATCGCGGTGCACTGCACGTACGTCCG
GCCGGCGTAGTGACGGGGAGGGATGCACGTAGTCGTAATCAGCAGCGGCGGTGCACCGCACGACGAAGCTCGACATGGCA
TGCATGCATGCACGAGCCGGGCTCAAATTAGGAGGGACATGCATGCACCCCGAAACAATGGAGAGGAGAGGAGAGGTCGT
CGTCC----------CTGCTTAGCCTACCATCGCTCCCCACCGCTCCACCTTCGTCTTCC------------TGCTGCAT
CGAGGGTCCCTCGATCATCCATGACCGCCGCCCGCCCTTGAGGAGGATCCATCGTTGACGACGACGACGATGCATGGGCA
ACTCGTGCCACGGCTCCATCGTTCCCGCGGCCGGTGACGGCCGCCACCACTACCGCACCAGCTGCAGCAGCTCCGACTGG
GACTCCGACTCCTCCTCCCCCGTCGTCGACCGCGCGCCGCACCGCAACACCATCATGGGCCGCGGCGCCGGCCACCAGCA
CCAGCTCTCCTCCCCGACGGCCGTGATGGGCCACCAGACCCCGCTCCTGCGCGACCTCTACAACGTCGGCCGCAAGCTCG
GGCAGGGCCAGTTCGGCACCACCTACCTCTGCACCGAGATCTCAACCGGCGTGGACTTCGCCTGCAAGTCCATCGCCAAG
CGCAAGCTGCTGACCCCGGAGGACGTGGAGGACGTGCGGCGCGAGATCCAGATCATGCACCACCTTGCCGGCCACGACAG
CGTGGTCACCATCAAGGGCGCGTACGAGGACGCGCAGTTCGTGCACATCGTCATGGAGCTCTGCGAGGGCGGCGAGCTCT
TCGACCGCATCGTCCAGCGCGGATACTTCTCCGAGCGCCGCGCCGCCGAGATCGCCCGCGTCATCGTCGGCGTCGTCGAG
GCCTGCCACTCGCTCGGGGTCATGCACCGCGACCTCAAGCCCGAGAACTTTCTCTTGAAAGACAAGGAGGAGAATAA---
------CAACAACAACAATGGCTCCGGCAA------------TAGTGTTAATGAACCGGCGGGCGACAAGGTCAACCTCA
AGGCCATCGACTTCGGCCTCTCCGTCTTCTTCAAGCCCGGCCAGATCTTCACCGACGTCGTGGGCAGCCCCTACTACGTC
GCGCCCGAGGTGCTCTGCAAGCACTACGGCCCCGAGGCCGACGTGTGGACCGCCGGCGTCATCGTCTACATCCTGCTGTC
CGGCGTGCCGCCCTTCTGGGCCGAGACGCAGCAGGGCATCTTCGACGCCGTGCTCAAGGGCGCCATCGACTTCGACTCCG
ACCCGTGGCCCAACATCTCGGACGGCGCCAAGGACCTCATCCGGAAGATGCTCAAGTCGCCGCCGGCGGAGCGGTTCACG
GCGCACCAGGTAACCAGAGATTCTTGTGAAAAGTTTTGTG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TGAAACCAAAAGTCATAATTAAAGGAGCAGGTCTT
GTGCCACCCATGGATCATTGAGAACGGCGAGGCCCCCGACGCGCCGCTGGACCCTGCCGTGCTCTCCAGGCTCAAGCAGT
TCTCGGCCATGAACCGGTTGAAGAAGATGGCTTTACGTGTGATCGCGCGCGGGCTGTCAGAGGAGGAGTTGGCCGGGCTC
AAGGAGATGTTCAAGACCATGGACACAGACGGCAGCGGTGCCATCACATTCGAGGAGCTCCGGGAGGGGCTGCGCCGTTA
CGGGTCCACAGAGCTCAGGGACTCGGAGGTGCGGGACCTCATGGAGGCAGCTGACGTGGACAACAGCGGCACCATCGATT
ACGACGAGTTCATCGCCGCCACCGTGCACATGAACAAGCTGGACCGCGAGGAGCACCTCATGGCGGCCTTCTCCTACTTC
GACAAGGACGGCAGCGGGTACATCACCGTCGATGAGCTGGAGGTGGCGTGTCGCGAGCACAACATGGCCGACGTCGGCAT
CGACGACATCATCAGGGAGGTCGACCAGGACAACGTGAGTACTC------------ATTAATCTATCTTATGTTACTGAT
TACAAATTTGAATTGAAACTTGAATGGCTCAAATGCAGGATGGTCGGATCGACTACGGGGAGTTCGTGGCCATGATGAAG
AAGGGGATCATCGGCAACGGCAGGCTTACCATGAGGCACACCTCCGACGGTAGCATCCTCCATGGAGCAGGCAGCGGCCT
CAGCAGCTAGCCAGCTAACAAGCATAGCTCCACCGGCCTTCCGTCGATC----GATCGCCATGGTTGTGCCAATTACATT
GTACTTGAAGTTTTATAGAAGATGAGCAAGAAGAAGAGAACGATGATGAAGAAGAAAGAAACTTATAATATATACAAGCT
CCACACGCATGTGATTCGATTCATTTCATTTACCGTGGATTTGAAGACCGAGTAGTGGTATCGATCGATCGTTGGTTCTA
GTGTACTACTTGTACTTAACTAGCAGAGTGGCCTGGGCATTTGCGCGGGCATTGTTCTTGGAAATGGATTAAGCATAGTG
GATATTGTT-AAAACCTTTGTTTGTTATAATCATGTGTTTTAAAGTGGTGCCATATTTTATATTTTATAATTAA----AT
GCTTTAACATAGATTGCCTCTGAAATTTTAATAATTGTATGTACATAACTATTATTTTTGTCTAGATCGTGTAAGAGCAT
CATCATGTGGTAAATTCAAAATTTTAATAGTATACATTTGAAAGTAATTAATTCTAGTGAATCCAACTCAAATTGTTTCG
ATCAAAT---AAATCTTAATTTAAACAAGTTATATTTAGTTGACCTCGATGTGATTCGATTCATTTACCATAGACTTGAC
GAGTGAGTAGTTCTATTGATCGATCGTTGGTTCTAATGTACTACTTGTACTTAATTTGTTGATGGGAGAAAGTAATTAAA
TGTACCTGTTCAATCGATTTTCAAGCAGAGGCACGTATGGCTCGTTCAAACATGCATGGTTTTCATTAAGTCTATTACCA
TTGTTAAACACAAATTT--GAAGGTCCAAATTCTCCCATTGTTAAACACGCCCATGGCTTTACGTGTTGAGCGCACTGAG
AAGCCCTTAATTCCACCAATCAAAAACTAATTACTATGTACTGGTTCGTCATCCATTCTTGAGCAATTAATAAAAAATT-
ATTTCCTGCACGCCCATGCCGCCCTTCCCGCTGTCTGCATCGCGTGCCCCATCTAGCCTTCTGCC
>chr6D_1
TCCTTCGAGCCAATTCTCTCTTGTTACCTTAGTTTTGATCATGAATTTGTAGGCTGAGCAGACTGTGAACCGACCCTTTC
TATTCGGATGCCATGCCCAAAAGTCTAAAATACATACGAGTACTACTACTACTCTCTCCGGTGTTTTTACTTGGCATATA
TATAAG--ATTTGTCTGAAATCAAACTTTGTAAAGTGTGGCCATATTTATATTTAAAATTATCAACATTTATAATACTAA
AGTTATACAATATGTAAATTAAATTCATAAGACGTG------------ATAAATAATACTGATCACGTG--TTATGAATG
TTGATATATTTTTTCTACAAAATTGATTAAACTATTTGAGGTTTGATTTGAGACAAATTT----TATATCCAGAGTGAAA
AAAGATCCGGGGAATACTACT---GTATGAAGCCCGGGCGC-------GACGG---------------------------
--------------------------------------------------------------------------------
-------------------------------GGGAGGGATGCACGACGTTGAGGAGAGGCGAGACTGCTACTGCAGCTAG
CACGTACGTGGTGCCGCACCTACTA----AGGCCAAGCGGCATGCACGTAGTCGATCGCGGTGCACTGCACGTACGTCCG
GCCGGCGTAGTGACGGGGAGGGATGCACGTAGTCGTAGTCAGCAGCGGCGGTGCACCGCACGACGAAGCTCGACATGCCA
TGCATGCATGCACGAGCCGGGCTCAAATTAGGAGGGGCATGCA--CACCCCGAAACAATGGAGAGGTGAGGAGAGGTCGT
CGTCC----------CTGCTTAGCCTACCATCGCTCCCCACCGCTCCACCTTCGTCTTCC------------TGCTGCAT
CGAGGGTCCCTCGATCATCCATGACCGCCGCCCGCCATTGAGGAGGATCCATCGTTGACGACAACGACGATGCATGGGCA
ACTCGTGCCACGGCTCCATCGTTCCCGCGGCCGGTGACGGCCGCCACCACTACCGCACCAGCTGCAGCAGCTCCGACTGG
GACTCCGACTCCTCCTCCCCCGTCCTCGACCGCGCGCCGCACCGCAACACCATCATGGGCCGCGGCGCCGGCCACCAGCA
CCAGCTCTCCTCCCCGACGGCCGTGCTGGGCCACCAAACCCCGCTGCTGCGCGACCTCTACGACGTCGGCCGCAAGCTCG
GGCAGGGCCAGTTCGGCACCACCTACCTCTGCACCGAGATCTCAACCGGCGTCGCCTTCGCCTGCAAGTCCATCGCCAAG
CGCAAGCTGCTGACTCCGGAGGACGTGGAGGACGTGCGGCGCGAGATCCAGATCATGCACCACCTTGCCGGCCACGACAG
CGTGGTCACCATCAAGGGCGCGTACGAGGACGCGCAGTTCGTGCACATCGTCATGGAGCTCTGCGAGGGCGGCGAGCTCT
TCGACCGCATCGTGCAGCGCGGATACTTCTCCGAGCGTCGCGCCGCCGAGATCGCCCGCGTCATCGTCGGCGTCGTCGAG
GCCTGCCACTCGCTCGGGGTCATGCACCGCGACCTCAAGCCCGAGAACTTTCTCTTGAAAGACAAGGAGGAGAATAA---
------CAACAACAACAATGGCTCCGGCAA------------TAGTGTTAATGAACCGGCGGGCGACAAGGTCAACCTCA
AGGCCATCGACTTCGGCCTCTCCGTCTTCTTCAAGCCCGGCCAGATCTTCACTGACGTCGTGGGCAGCCCCTACTATGTC
GCGCCCGAGGTGCTCTGCAAGCACTACGGCCCCGAGGCCGACGTGTGGACCGCCGGCGTCATCGTCTATATCCTGCTGTC
CGGCGTGCCGCCCTTCTGGGCCGAGACGCAGCAGGGCATCTTCGACGCCGTGCTCAAGGGCGCCATCGACTTCGACTCCG
ACCCGTGGCCCAACATCTCCGACGGCGCCAAGGACCTCATCCGGAAGATGCTCAAGTCGCCGCCGGCGGAGCGGTTCACG
GCGCACCAGGTAACCAAAGATTCACTTTC----AATGCGAGATTCCAATGAAATTCACTGAATGAATTTTAGTAGG----
-----CGCTTAAATATTTTTTACCTTTTGGTCAAAATATTTCAGCAAC---TTCGGTAGTATGCAGGAATTCGAATATTT
TTCAAAAATTACAAATTTGTTTTGTTGCATTAGATGAATGTTTCGGCCCTTT----GGCCAAAATGCAACTTGAAATAGC
TGAAATTCAGGATTTCGGTGATTTCCGGATTTGTTGAAATATTTCTGAAACCAAAACTGATAACC----GACCAGGTGTT
GTGCCACCCATGGATCATCGAGAACGGCGAGGCCCCCGACGCGCCGCTGGACCCTGCTGTGCTCTCCAGGCTCAAGCAGT
TCTCAGCCATGAACCGGTTGAAGAAGATGGCTTTACGTGTGATCGCGCGCGGGCTGTCAGAGGAGGAGTTGGCCGGGCTC
AAGGAGATGTTCAAGACCATGGACACGGACGGCAGCGGTGCCATCACATTCGAGGAGCTCCGGGAGGGGCTGCGCCGTTA
CGGGTCCACCGAGCTCAGGGACTCGGAGGTGCGGGACCTCATGGAGGCCGCTGACGTGGACAACAGCGGCACCATCGATT
ACGACGAGTTCATCGCCGCCACCGTGCACATGAACAAGCTGGACCGCGAGGAGCACCTCATGGCGGCCTTCTCCTACTTC
GACAAGGATGGCAGCGGGTACATCACCGTCGACGAGCTGGAGGTGGCGTGTCGCGAGCACAACATGGCCGACGTCGGCAT
CGACGACATCATCAGGGAGGTCGACCAGGACAATGTGAGTACTCGATTTTCTCTTCATTAATCTATCTTATGTTACTGAT
TACAAATTTGAATTGAAATTTGAATGGCTCAAATGCAGGATGGTCGGATCGACTACGGGGAGTTCGTGGCCATGATGAAG
AAGGGGATCATCGGCAATGGCAGGCTTACCATGAGGCACACCTCCGACGGTAGCATCCTCCATGGAGCAGGCAGCGGCCT
CAGCAGCTAACCAGCTAACAAGCATAGCTCCACCGGCCATCCATCGATCGATCGATCGCCATGGTTGTGCCAATTACATT
GTACTTGAAGTTTAATAGAAGATGAGCAAGAAGAAGAGAACGATGATGAAGAAG----AGACTTATAATATATACAAGCT
CCACACGCATGTGATTCGAT-----TCATTTACCGTGGATTTGAAGACCGAGTAGTGGTATCGATCGATCGTTGGTTCTA
GTGTACTACTTGTACTTAACTAGCAGAGTGGCCCGGGCATTTGCGCGGGCATTGTTCTTGGAAATGGATTAAGCATAGTG
GATATTGTT-AAAACCTTTGTTTGTTATAATCATGTGTTTTAAAGTGGTGCCATATTTTATATTTTA----TAA----AT
GCTTTAACATAGATTGCCTCTGAAATTTTAATAATTGTATATACCTAACTATTA-TTTTGTCTAGATCGTGTAAGAGCAT
CATCATGTGGTAAATTCAAAATTTTAATAGTATACATTTGAAAGTAACTAATTCTAGTGAATCCAACTCAAATAGTTTCG
ATCAAAT---AAATCTTAATTTAAACAAGTTATATTTAGTTGACCTCGATGTGATTCGATTCATTTACCATAGACTTGAC
GAGTGAGTAGTTCTATTGGTCAATCGTTGGTCCTAATGTACTACTTGTACTTAATTTGTTAGTGGGAGAAAGTAATTGAA
TGTACCTGATCAATCGATTTTCAAGCAGAGGCATGTATGGTTCGTTCAAACATGCATGCTTCTCATCAAGTCTATTACCC
CTATAAAAGAACGGGATCCGAAGATCAAAATTCTCCCATTGTTAAACACAAATCA---------TGTTGAGCGCACTGAG
AAGCCACTAGTCCTATCAATCAAAAACTAATCACTATGTACTGGTTCGTCATCCATTCTTGAGCAATTAATAAAAAAAAC
CTTTCTTGCGCGCCCATGCAGCCCCTCCTGCTATCTGCATCGTGTCCCCAACCAGCCT-------
>chr6B_3
CTTT--GAGCCAATTCTCTCTTGTTACCTTAGTTTTGATCATGAATTTGTAGGCGGAGCAGACTGTGAACCGACCCTTTC
TATTGGGATGCCATGCCCAAAAGTCTAAAATACATACGAGTACTACTACTACTCTCTCCGGTCTTTTTACTTGGCATATA
TATAAGATATTTGTCTGAAATCAAACTTTGTAAAGTGTGGCCATATTTATATTGAAAAATATCAACATTTATAGTACTAA
AGTTATACAATATGTAAATTAAATTCATAAGACGCACCTAATAATAATATAAATAATATTGATTACACATATTATGAATG
CTGGTAT-TTTTTTCTACAAAATTGATTAAGCTTTTCGAGGTTTGACTTCAGATAAATTT----TATATGCAGAGTTAAA
AAAGATCCGGGGGATACTATACTCGTATGAAGCCCGGCCGCCACGCCGGACGG---------------------------
--------------------------------------------------------------------------------
-------------------------------GGGAGGGATGCACGACGTTGAGGATAGGAGAAACTGCTGCTGCAGCTAG
CACGTACGTGGTGCCGCACCTACTAGCTAATGCCAAGCGGCATGCACGTAGTCGATCGCGGTGCACTGCAC----GTCCG
GCCGGCCAGCACGGC----------------------------------------------------GCTCGACATGCCG
TGCATGCATGCACGAGCGA-GCTCAAATTAGGAGGGACATGCG----CCCCGAAACAATGGAGAGGAGAGGAGTGGTCGT
CGTCCGTCGTCGTCCCTGCTTAGCCTACCATCGCTCCCCACCGCTCCACCTTCGTCTTCCCGCTCGATCCCTTGCTGCAT
CCAGGGTCCCTCGATCATCATTGAT----------CATTGAGGAGGATCCATCGTTGACGACGACGACGATGCATGGGCA
ACTCGTGCCACGGCTCCATCGTTCCCGCGGCCGGTGACGGCCGCCACCACTACCGCACCAGCTGCAGCAGCTCCGACTGG
GACTCCGACTCCTCCTCCCCCGTCCTCGACCGCGCGCCGCACCGCAACACCATCATGGGCCGCGGAGCCGGCCACCAGCA
CCAGCTCTCCTCCCCGACGGCCGTGATGGGCCACCAAACCCCGCTCCTGCGGGACCTCTACGATGTCGGCCGCAAGCTCG
GCCAGGGCCAGTTCGGCACCACCTACCTCTGCACCGAGATCTCAACCGGCGTCGCCTTCGCCTGCAAGTCCATCGCCAAG
CGCAAGCTGCTGACGCCCGAGGACGTGGAGGACGTGCGGCGCGAGATCCAGATCATGCACCACCTTGCCGGGCACGACAG
CGTGGTCACCATCAAGGGCGCGTACGAGGACGCGCAGTTCGTGCACATCGTCATGGAGCTCTGCGAGGGCGGCGAGCTCT
TCGACCGCATCGTCCAGCGAGGCTACTTCTCCGAGCGCCGCGCCGCCGAGATCGCCCGCGTCATCGTCGGCGTCGTCGAG
GCCTGCCACTCGCTCGGGGTCATGCACCGCGACCTCAAGCCCGAGAACTTTCTATTGAAAGACAAGGAAGGTAACGGTGG
TGACACCAACAACAACAATGCCTCCGGCAACAATGTTGATGTTAATGTTAACGAACCGGCCGGCGAGAAGATCAACCTCA
AGGCCATCGACTTCGGCCTCTCCGTCTTCTTCAAGCCCGGCCAGATCTTCACCGACGTCGTGGGCAGCCCCTACTACGTC
GCGCCCGAGGTGCTCTGCAAGCACTACGGCCCCGAGGCCGACGTCTGGACCGCCGGCGTCATCGTCTACATCCTCCTCTC
CGGCGTGCCGCCCTTCTGGGCCGAGACGCAGCAGGGCATCTTCGACGCCGTGCTCAAGGGCGCCATCGACTTCGACTCCG
ACCCGTGGCCCAACATCTCCGACGGCGCCAAGGACCTCATCCGGAAGATGCTCAAGTCGCCGCCGGCGGAGCGGTTCACG
GCGCACCAGGTAACCAAAGATTCACTTTCTATCAATGCAAGATTTCAATAAAAAAAATTCATTGATTCCCATTTTTTTTA
GTACACGCTTAAATATTTTTTATCTTTTGCTCAGAATATTTCAGCAATTTTTTCGGTAGTACGCAGGAATTCGAATAATT
TTCAAAAATTACTAATTTGTTTTGTTGCATTAGCTGAATGTTTCGGCCCTCCAAAGGGCCGAAATGCAACTTGGTATCGC
TGAAATTCAGGATTTCAGTGATTTCCGGATTTATTGAAATATTTCTGAAACCAAAAGTGATAACC----GACCAGGTGTT
GTGCCACCCATGGATCATCGAGAACGGCGAGGCCCCCGACGCGCCGCTGGACCCTGCTGTGCTCTCCAGGCTCAAGCAGT
TCTCGGCCATGAACCGGTTGAAGAAGATGGCTTTACGAGTAATCGCGCGCGGGCTGTCAGAGGAGGAGTTGGCCGGGCTC
AAGGAGATGTTCAAGACCATGGACACGGACGGCAGCGGTGCCATCACGTTCGAGGAGCTCCGGGAGGGGCTACGCCGTTA
CGGGTCCACCGAGCTCAGGGACTCAGAGGTGCGGGACCTCATGGAGGCCGCTGACGTGGACCGTAGCGGTACCATCGATT
ATGACGAGTTCATCGCCGCCACCGTGCACATGAACAAGCTCGACCGCGAGGAGCACCTCATGGCGGCCTTCTCCTACTTC
GACAAGGATGGCAGCGGGTACATCACCGTCGACGAGCTGGAGGTGGCGTGTCGCGAGCACAACATGGCCGACGTCGGCAT
CGACGACATCATTAGGGAGGTCGACCAGGACAACGTGAGTACTCGATTTTCTCTTCATTAATCCATCTTATGTTACTGAT
TACAAATTTGAATTGAAATTTGAATGACTGAAATGCAGGATGGTCGGATCGACTACGGGGAGTTTGTGGCCATGATGAAG
AAGGGGATCATTGGCAACGGTAGGCTTACCATGAGGCACACCTCCGACGGTAGCATCCTCCACGGAGCAGGCAGCAGCCT
CAGCAGCTAGCCAACTAACCAGGATAGCTCCATCGGCCATCCATCAAGT-----ATTGCCATGGTTGTGCTA--------
-TACTTGAGGTTTAATAT---------AAGAAGACGAGAACGATGAAGAAGAAT----AAACTTATAATATATACAAGCT
CCA---GCATGTGATTCGAT-----TCATTTACCGTGGATTTGAAGACAGAGTAGTGGTATCGATCGATCGTTGGTTCTA
GTGTACTACTTGTACTTAACTAGCAGAGTGGCCCACAAATTTGCGCGGGCATTGGTCTTGGAAATGGATTAAGCATAGTG
GGTATTGTTAAAAACCTTTGTTTGTTATAATCATGTGTTTTAAAGCGGTGCCATATTTTATATTTTA----TAAGAATAT
GCTTTAACATAGATTGCCTTTGAAATTTTAATAATTGTATATGCCTAACTATTATTTTC-TCTAGATCGTTTAAAAATGT
CATCATATTAAAAAACTTAA----------------------------------TAGTGAATCCAACTCAAATTGTTTTG
ATCAAAAAAAAAATCTTAATTTAAA---GTTACATTTAGTTGGCCTCGATGTGATTCGATTCATTTACAATAAACTTGAC
GAGAGAGTAGTTGTATTGATCGATCGTTGGTTCTAGTGTACTACTTGTACTTAATTTGTTGGTGGGAGAAAGTAATTAAA
CGTACCCGATCAATCGATTTCCAAGCAAAGGCACGTATGGCTCGTTCAAACATGCATGTTTTTCATCAAGTCTATTACCC
CTATAAAAGAACGGGATCCGAAGGTCCAAATTCTCTCATTGTTAAACACAAATCA---------TGTTGAGCGCACTGAG
AAGCCACTAATCCCACCAATCAAAAACTAATCAATATGTAATGGTTCGTCATCCATTCTTGAGCAATTAATAAAAAATT-
CTTTCCTGCGCGCCCATGCCGCCCTTCCCGTTGTCTGCATCGCATCCCCCAACTAGACTTCTGCC
>SNPs
-----S---S--S-------------------------------------------------------------------
-----S----------------------------------------------------S---------------------
---------------S----------------------S-----------------------------------------
----------------------------------------S-----------S---------------------------
------------S-----------S------------S----------------------SSSS------------S---
-----------------------------------------S---SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------------
-----------------------------------S--------------------------------------------
-------------------------------------S---------------------------------------S--
-------------------------------------------SS-----------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
------------------------------------S------------------------S------------------
----------------------------------------------------S-S-------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
----------------S------SSS-SSS-SSSS-SSSS----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S----SSSSSS--S-----S--
------------------S--------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
---------S--------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------S-----------------------S-----------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S---S-------------------------------------
-------------S----------------------------------------SSSS----------------------
--------------------SSSSS-------------------------------------------------------
---------------------------------S----------------------------------------------
-------------------------------------------------------------------SSSS---------
----------------------------------------S---S-----------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--------S-------------------------------------------------S-------S------------S
S-S-S---S-SSSSSS---------------------------------SSSSSSSSSSSSSSS----------------
-----SS----S-------------------S------------------------------------------------
S--------S-----------------------------------S-----S-------------
>forward_459
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------GCGACGTGCAGTGAAGTTAC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_2398
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CTT
GTGCCACCCATGGATCA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_584
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GCTCGTTCGTAGGTGTAGCA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_2650
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------AGAGCTCAGGGACTCGGAG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_798
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------ACGACGAAGCTCGACATGG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_2689
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------AGCTGACGTGGACAACAGC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_1333
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CGAGATCTCAACCGGCGTG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_2979
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTTGAATGGCTCAAATGCAGGA----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_1335
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------GAGATCTCAACCGGCGTGGA-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_3305
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TTCATTTACCGTGGATTTGAAGACC-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
