>input_sequence_42938
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---------------------------ATGGTGTTCGGCCGGGGCAAGCCGTCCTCT------------CCGGCGGCCGC
CACCTCGTCGGCCGCCGCGGCGGCGTGCTCCGAGCTCCGGGCGGCGTACCACGAGTGCTTCAACCGGTGGTACGCCGACA
AGTTCGCCAAGGGCCAGTGGAACAAGGACGACTGCGCCGCCGACTGGCACAAGTACCGCGCCTGCCTCGAGGTAAACCTA
GCCCACGCCCGGCAT--CCCTCCCTCCCCCCAACCGCTCCTCGCTATCATTGCTTGGCACTTAGATTGGATCATCGGTTT
GCGATGCGCGCGCGGTAGAGATCCCCGCCATTGACCACCTAGTTTTCTCTAATGGGGATCCCTGAGGTGATGTTTTCCAG
ATATATGAATTCCTGATTATGAAGATCTTGTATCTTAGGCCGAGATAACTCCA-----------GGGAGGTATAAATTTC
ATGTAAGATTTGGAATAGCTTGTTTAGGAAGATATTTT--GAGGGACTGTCACGATTATGTCGCTTCTTTGACTGGATTG
GCCT-AGGTGGGTAT--------TCTGGGGAGAATGTGAGAATCATCATAGTAGAA-GGGCTTATGGCGGTCAGGTGTTA
TGTTGCTTATGATCTCGATT--------------------ATGTTGCAAATGTGGGATCT---GGCAATCGTGTGCAATG
GCAGTCCAGAGCACCTATGTGTGGACAAGCAATGTAGGTTAACGAGGATGCTGTTTCTTGTTAATTGTTATCCACTCTTC
AACCCAAAAAGGTTATTGCCTAAAAAAACACGAGTTATTAACCTTGTATATCCTCTCTAAATAGTCGGAGCAATTGAGCT
TGCAAGACTGCCAGTTCCATCACATTTGCATGACAAAGCAGTTAATTGACATCACAGGGGAGCTCAGTCTGTAGAGAGTT
AACCAACAATGGATTTTTGTTTTTTGGATAAAAGGGGAGCTCAGAC----------------------------------
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----------------------------------------------TGATAGTATCAAAAAACG-CTTACATTTTGAGAC
AGAGGGAGTATTGGTCATAACTGGTGCGATACTGGTGATAATTTGTGACATGGTTGGCAGGCATTCTGGTTGCTTAGTGA
CTGCCAACCCACCCAA--------TATTTCTCAGGAAAACTCACTGTTGTCAATTTCTATTGCTGAACGGACTGTCTTTT
TTATTTCACTTGCAGAGTTGGAAGTCAATTGCCTACCCCAACTTGTTTGTTTGTTTGTAGAGTTGGAAGTCAGTTGTTCT
TCATGACTTAATTATATAGTGCAAATAGCAATGCCGTGTATTCAGTAAAACTGGTGGTTATATCAAATCGTACCAGATCA
ATAGTTCACAGCTTTGTG-TTTTTGTTTGCAGCAATTTGCCATTACTGCAAGGAATGAAACCTTCTGAACACCCTAATGT
ATTTAATTATTTTATTTATAGATAAAAGGTGTCTTATTTTTTTTCAAAATTCGGCCTGTGTCTGTGTTATTTGCCTCTTC
AGTTGTCCATGTTGTTGTCATATATCTGTATTTTACAAGAATGATTGTTCAAAAATTGAGTTCAAAGAAGTTATGTTCAT
TCACATAATCACAAAGCACTGTTGTACTATCACGCAATGAGTGTTCAACATGCACCAGTACCCTTTTTTCTTCATTTCCA
CATAAGCAATCTGTCTAATCTTGCATTTCACAGCCCTTTAGGTTTAGATTCTATGATTTAATGTTGCGTGTTTCTTGCTT
GTCTAATGGCTGATCATTCCACATTTTAATTGTTTCTAGGAACATCTCGAAGACAAGCATCTCAGGCAAATCCTACTGGA
GTCGGAAACGTCTCCGTCTTATGCCCAGCTTGATCCCGATTCTTCGTCGCGACAAGGTGCCACCCCATCAAAATGA----
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>chr5D_1_TraesCS5D01G196400
ACTGCGCTAGGGTTTTCATGCAAGTGCACACACGCTAGGGTTTCTGCTGCCTCCCATCGTGCAG-C---CGGCCTACCTC
GTCTTCTTTGGCCTTAGGACCGTGGAAGTGCGGTGGATCCCAATCTTTGCCGACGGGAGGGCTTCGTTTTTAG----TTT
ATTTACGAGTTTTGCTCGAGTTTGTGTCCTGCTCAGAAAGGCGGGACAACGACA-----------------CCTTCTTGC
AGATGGAATAAGATTCTCTCCGCCTACCTCCA-TTCCGTTGATGCTTCTAGCATCATCGGAGAGCATGTGGAGGTTTGTC
TTCGACGGATCTCAAGGGATTCAGTCAGCGTTTTC-TTCGATGGATCCGCTTGGATCCAGTCTA----------TGTTGG
TGTGTCTACAGATTGGATCTTTCTGATCTACACTTCTCTTCATCGACGGCGGTTGCTATTCTAGTGCGCTAGTCCTATGA
GGTCTTAACATGACGACTTTCCGACTGTCTACTACGACAAGGTTTGTCCGAC-TCGAGTGATGGAGGGGCGATGACGGCA
GCACTTCTTCGGCTCGCCCCAGTGCTTGTAGTCGTCGCTAGGTGGTATACG-ATATGGATGTAATTTTTAC---TTCTGG
TA---TTTGTACTACCTTGATAGGCGACGAATAAATTAGAAGTTTTTCAAATAACAAAAACAATTAATTTTG--TGCTAA
AAAA-GGGAGAGAAAACTCAAAAGTAGTTAAAACACACACGAGGCGTCCGTCCGAAAAACATAATACACCAGGCGTATGC
AAGTTCGGTACGGCTTTGCGGTAGAAATTGGAATCCGCTTCGAGTAGGTTTACGTAATATCCCCAAATACGCCTTACGAC
CGGATTATATATTACGGTAATAAATAAACCTGTCTTTGCGCAGGGTCGTGGGACGG----GAGAGAGAGA----------
--GAGAGAGAGAGAGAGAGAGAGAGAGGGAATCAGTCAGGGAAGGACAGAGCGAGAACACAAAACGAGACTCGGCGGCGG
TG---GCCAGGGAGAAGCAGCACAAGGATGGTGTTCGGCCGGGGCAAGCCGTCCTCT------------CCGGCGGCCGC
CACCTCGTCGGCCGCCGCGGCGGCGTGCTCCGAGCTCCGGGCGGCGTACCACGAGTGCTTCAACCGGTGGTACGCCGACA
AGTTCGCCAAGGGCCAGTGGAACAAGGACGACTGCGCCGCCGACTGGCACAAGTACCGCGCCTGCCTCGAGGTAAACCTA
GCCCACGCCCGGCAT--CCCTCCCTCCCCCCAACCGCTCCTCGCTATCATTGCTTGGCACTTAGATTGGATCATCGGTTT
GCGATGCGCGCGCGGTAGAGATCCCCGCCATTGACCACCTAGTTTTCTCTAATGGGGATCCCTGAGGTGATGTTTTCCAG
ATATATGAATTCCTGATTATGAAGATCTTGTATCTTAGGCCGAGATAACTCCA-----------GGGAGGTATAAATTTC
ATGTAAGATTTGGAATAGCTTGTTTAGGAAGATATTTT--GAGGGACTGTCACGATTATGTCGCTTCTTTGACTGGATTG
GCCT-AGGTGGGTAT--------TCTGGGGAGAATGTGAGAATCATCATAGTAGAA-GGGCTTATGGCGGTCAGGTGTTA
TGTTGCTTATGATCTCGATT--------------------ATGTTGCAAATGTGGGATCT---GGCAATCGTGTGCAATG
GCAGTCCAGAGCACCTATGTGTGGACAAGCAATGTAGGTTAACGAGGATGCTGTTTCTTGTTAATTGTTATCCACTCTTC
AACCCAAAAAGGTTATTGCCTAAAAAAACACGAGTTATTAACCTTGTATATCCTCTCTAAATAGTCGGAGCAATTGAGCT
TGCAAGACTGCCAGTTCCATCACATTTGCATGACAAAGCAGTTAATTGACATCACAGGGGAGCTCAGTCTGTAGAGAGTT
AACCAACAATGGATTTTTGTTTTTTGGATAAAAGGGGAGCTCAGAC----------------------------------
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----------------------------------------------TGATAGTATCAAAAAACG-CTTACATTTTGAGAC
AGAGGGAGTATTGGTCATAACTGGTGCGATACTGGTGATAATTTGTGACATGGTTGGCAGGCATTCTGGTTGCTTAGTGA
CTGCCAACCCACCCAA--------TATTTCTCAGGAAAACTCACTGTTGTCAATTTCTATTGCTGAACGGACTGTCTTTT
TTATTTCACTTGCAGAGTTGGAAGTCAATTGCCTACCCCAACTTGTTTGTTTGTTTGTAGAGTTGGAAGTCAGTTGTTCT
TCATGACTTAATTATATAGTGCAAATAGCAATGCCGTGTATTCAGTAAAACTGGTGGTTATATCAAATCGTACCAGATCA
ATAGTTCACAGCTTTGTG-TTTTTGTTTGCAGCAATTTGCCATTACTGCAAGGAATGAAACCTTCTGAACACCCTAATGT
ATTTAATTATTTTATTTATAGATAAAAGGTGTCTTATTTTTTTTCAAAATTCGGCCTGTGTCTGTGTTATTTGCCTCTTC
AGTTGTCCATGTTGTTGTCATATATCTGTATTTTACAAGAATGATTGTTCAAAAATTGAGTTCAAAGAAGTTATGTTCAT
TCACATAATCACAAAGCACTGTTGTACTATCACGCAATGAGTGTTCAACATGCACCAGTACCCTTTTTTCTTCATTTCCA
CATAAGCAATCTGTCTAATCTTGCATTTCACAGCCCTTTAGGTTTAGATTCTATGATTTAATGTTGCGTGTTTCTTGCTT
GTCTAATGGCTGATCATTCCACATTTTAATTGTTTCTAGGAACATCTCGAAGACAAGCATCTCAGGCAAATCCTACTGGA
GTCGGAAACGTCTCCGTCTTATGCCCAGCTTGATCCCGATTCTTCGTCGCGACAAGGTGCCACCCCATCAAAATGACAGC
CTTGGACTAACAACATGGTCGATTTCTTTCCTTGATCAAAATTCGGAGACGATTGATAGAGTGAGCCACAAAGTCTGTAT
TTGGATACATGTTATGTCCCTGGATCATGTCGATTTCAGCTCATGAGATTAACTTGTAAAATTTGCTTGGATCTGATTG-
-----------------TACTCATCTTACAAAGTATACTCAACCGAGCAATAGTTTGTAAATACTGAGCAGTTCTGGATT
ATGAAATTAGTTGAATAGTATCAGCTGTCCAGGTTTTGTAACACGGTTTCACGCACGCTTCTTCTAGTCAAAGGATGAGA
TGTAGATTAAATCTGATCATCTGCTGTGATGAGAAATAAGTCACTGATATTTCGAATAAGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TGCATAAAAA-TCAAGAAATAA-AAAACCCAGATGTAGGCGAACGAACTATGTTGAAATAAATTGATTGGGTACATAAAT
TTTA---------------------TGGTTTTCACTTGG-----------------------------------------
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--------------GTTTCCGCAAATTAATCGAGCAACCTTCTTCTGTTTATTTCATGAACCGGAGTCC--TAAGGGGCG
TGGCTTAAAAAAAAG-----------------------------------------GTAAGCAAAGAGG-TAATACATGT
GTGTTGTAGTGCAATAGCAGCGAGGGATGAAGAAGAGCCAGGTGCTCTACTCTACTCA-TCCATCCTGATGACGCAGCGC
AGGCCTTCCCCCTTGAG
>chr1B_35
----------------------------------CTAGGGTTTC-CCTGCCTCTCGCCGGCGCCGCCGCCGGTACGCCTC
TTCTTCTATGATTCTTGGACCATGGAGGT---GCGGATCCCGGTCTTTACCGGCAGGAGGGCTCCGTTTTTAGGTGC---
ATTTCTGAGGTTTTATAGGGTTTGTGTCATGCTCAAGAAGACAAGATGGGGGCA-----------------GCTTCTTGA
AGATGGAATAAGGTCCTCCCCGTCTAGCCCCCGTCCTGGTGATGTTTCAAGCATTGTCGGAAGGCGTGTGGAGGTTTGTC
TTCGACGGATCTCATGGGATCCGGTCGGCGTTTGT-TTCGGTGGATCCGACTGAATTCGGTCTTCGTTCATCTATGTCTT
TTTGACTGCAGGTTAGTTCCTTCCGATCTACGCGTCTCTTCATCGGTGGCGGTTACTATTCTGGTGCGCTGATTCTATGA
GGGCTTAGCACGATGACTTTTCAACTGTCTACTACAACAATGTTTACCTAAC-TCCGACAAGGGAGAGGCGATGATGGCG
GCACGCCTTCTGTTCACTCCAGTGATTATAGTCGTCGCTAGGTGGTCTACGGACCTGGATGTAAATTTTGC---TTCTCA
TGTTCTATGTACTACCTTGATAGTTGATGAATA-----------------------------------------------
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-----------------
>chr1D_36
-----------------------------------TAGGGTTTC-CTTGCCTCTCGCCGGCGCCGC---CGGTCCGCCTC
ATCTCCTATGGTCCTTGGATCATGGAGGCACGGTGGATCCCGGCTCTTGCCGGTGGGAGGGCTCCGCTTTTAG---ATGA
TTTTCTGAGTTTAGTTAGGTTTTGTGCCATGCTCAAGAAGACGAGG-----------------CGGCGGCGACTTCTTGA
AGATGGAATAAGGTCCTCCCCGCCTAGCTCCCGTTCCGGTGATGTTTCAAGCATCATCGAAAGGCGTGTGGAGGTTTGTC
TCCGGCGGATCTCGTGGGATCCGGTCGGCGTTTGTCTTCGGTGGATTCGATTGGATCCGGTCTTCGTTCGTCTACGTCTG
TGTGTCTGCAGGTTGGATCCTTCCGGTCTATGCTTCTCTTCATAGGCGGCGGTTGCTGTTCTGGTGCGCTGGTCCTATGG
AGCCTTAGCACGACGACTTCCCGACTGTCTACTACAACAATGTTTGCCCGGC-TC-GATGAGGGAGGGGCGATGACGGCG
GCGCGCCTTCGGCTCGCTCCAGTGCTTGTAGTCGTCGCTAGGTGGTCTATGGACCTGAATGTAAATTTTAC---TTCTAG
TGTTCTTTGTACTACCTTGACAGTTGATGAATAGATCGGAAGTTTTT---------------------------------
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-----------------
>chr3A_37
------------------------------------AGGGTTTCTCCTGCCTCTCGCCGGCGCTGGCGCCGGTCTGCCTC
GTCT-CTGTGGCCTTAGGGTCGTGGAGACGTGGTGGATCCCGACCCTTGTTGGCGGGAAGGCTTTGTTTTTTATGC---T
TTTTCTGAGTTTTGTTAGGATTTGTGTCCTGCTCAG-----------------A-----------------GCTTTCTGA
AGATGAAATAAGGTTCTCCCCGTCTACCCTTTGTCTCGGTGGTGCTTCTAGCGTCATCGTAGGGCATATGGAGGTTTATC
TCCAACGGATCTTGCGGGATTCGTTCGGCGTTTGTCTTCGGCGAATTCACGTGGATTCGATCTT----------TGTTCG
TGTGTCTACATGTTGGATCCTTCTGATCTAAACTTCTTTTCGATGGTGGCGGTTGCTGTTCTGGTGCGTTGACCTTATAG
GGCCTTAGTATGACGACTTCCCGACTGTCTACTACAACAAGTTTTGTCCGGC-TCCAGTGAAGGAGGAGCAATGACGATG
GCGCACCTGCGGCTCGATTTAGTGCTTGTAGTCGTCGCTAGGTGGTATACGCATCTGGATGTAATTTTTA----------
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>chr3D_60
T----------------------------------------------------------------GCGCCGGTCTGCCTC
GTCTCCTGTGGTTTTAAGGCCATGGAGGCGTGGTGGATCTCGGACCTTGCCGGTGGAAGGGCTTCGTTTCTAG---AT-G
TTTTATGAGTTTTCTTAGGGTTTATGTTCTGCTCAG-----------------AGAGATGAGACGGCGGCGGCTCTCTGA
AGATGAAATAAGGTTCTCCTCGCCCAA-CCCCGTTCTGGTGGTGCTTCTAGCGTCATCGAAGGGCGTGTGGAGATTTGTC
TCCGGCGGATCTCAGGGGATTCGGTCGGCGTTTGTATTCGGTGGATCCACATGGATCTGGTCTT----------TGTTCG
TGTGTCTACAGGTTGGATCCTTCCAATCTAAATTTCTCTTCAACGGCGGCGGTTGCTATTCTGATGCGCTGGTCCTATAG
GGCCTTAACACGACGACTTCCCGACTGTATACTACAACAAGTTTTGCCCGAC-TCCAGGGAGGGAGGGGCGATGACAGCG
GCGCGCCTTCGGCTCGCTCCAGTGCTTGTAGTCGTCGCTAGGTGGTCTACGGATCTGGATGTAATTTTTATTATTTCTGG
TATTCGTTGTACTGTCATGATTGATGATGAATAGATTGAAAGTTTT----------------------------------
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-----------------
>chr2B_65
-----------------------------------------------------------------C---CGGCCTACCTC
ATATCCTATGGCCTTAGGGCCATGGAGGTGTGGTGGATCCCGGTCCATGACGGCAGGAGGCTTTCGTATATAGGTTAT-A
TTTTTTGAAGTTTGGTAGGGTTTGTGTCCTGCTCAG-----------------AAAGGCGGGACTGCAACGACTTTCTGA
GGATGGAATAAGGCTCTCTCCACCTAGCCCCCATCCCGGTGATGCTTCTAGCGTCATCGATGGGTGTGTGGAGGTTTGTT
GCCGGCAGATCTCGCGGGATTCGGTCGGCGTTTGTCTTAACTGGATCCACTTGGATCCAGT-TT----------TGTTCG
TGAGTCTACGAGTTGGATCCTTCCGATCTACGCTTCTCTTCATCGGTGGCGTTTGCTGTTCTGGTGCGCTGGTCCTCTGG
GGCCTTAGCATGACAACTTCCCGAATGTCTACTACTATAAGGTTTGCC-GGC-TCCGGTAATGG-AGGGCGATGACGGC-
ACGTGTCTTCGGTTCTCTCTAGTGCTAGTAGTCATCGCTAGGTGGTCTACGGACCTGTATGTAATTTTTTAT--TTCTGG
TGTTCTTTATACTATCTTGACAGTTGATGAATAGATTAGAAGTTTT----------------------------------
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-----------------
>chr1D_70
-------------------------------------------------------------------------CTACCTC
GTCTCCTGTGGTCTTAGGGCCGCGGAGGCGCAATGGATCCCGGCCCTTCCTGATGGTAGGGCTCCGTTTTTTTA--AT-G
TTTTTCGAGTTTTATTAGGGTTTGTGTCCTGCTCAGTGATGCGAGG-----------------CGGCGTCGACTCTCTGT
AGGTGGAATATGGTCCTCCCCGCCTAGCCCCAGCTCTAATGGTGTTTCTAGTA-TGTCAGAGGGCGTGTGGAGGTTTGTC
TCCTGCGGATCTCATGGGATTCGTTCGGCATTTGTCTTCG-TGGATCTACGTGGATCCGGTTTT----------TGTTCG
TCTGTCTACAGGTTGGATCCTTTCGATCTACGCTTCTCTTCATCGGCGGCGGTTGTTGTTCTGATGCGTTGGTCCGATGG
GGT-TTAGCACGATCACTTCCCGACGATTTACTACAACAAGGTTTGCTTGTCTTC-AATGAGGGAAGGGCGATGACGGCG
GCGCGCCTTCGGCTTGCTCCAGTGCTTGTAGTCGTCGCTAGGTGGTCTACGGACATGAATGTATTTTTTAC---TTCTGG
TATTT---------------------------------------------------------------------------
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-----------------
>chr2B_73
----------------------------------------------------------------------------CCTC
ATCTTCTATGGTCCTTGGACCATGGAGGCACGGTGGATCCCGACCTTTGCCGGCGGGAGGGCTTCGTTTTTAA---ATAT
TTTTTTGAGTTTTGTTAGGGTTTATGTCATGCTTAA-----------------GAAGACAAGACGGCGGCGGCTTCTTGA
AGATGGAATAAAGTCCTCCCCGCCTAGCCCCCGTCCCGATGATGTTTCAAGCATCGTCGGAAGGCATGTGGAGGTTTGTC
TTCGACGGATCTCGTGGGATCCGATCGGCGTTTGTCTTCGGTGGATCCGACTGGATCCTGTCTTCGTTCGGCTACGTTTG
TGTGTCTGCAAGTTGGATCTTTTCGGTCTATACTTATCTTCATCGACGACGGTTGTTGTTCTGGTGCGTTGGTCCTATGG
GGCCTTAGCACAACGAC-TTCCGACTGTCTACTACAATAATGTTTGCCCGGC-TCCGACGAGGGAGGGGCGATGACGGTG
GCGCGGCTTCGGTTCGCTCCAGTGCTTGTTGTCGTTGCTAGGTGGTCTACGGGCCTGGATGTAAATTTTAAT--TTC-AG
TGTTCTTTGTACTACCTTGATAGTTGATGAATAGATCGGAAGTTTT----------------------------------
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-----------------
>chr2B_73
----------------------------------------------------------------------------CCTC
GTCTCCTATGGTCCTTAGATCATGGAGGCGCAGTGGATCCCGGCCCTTACTGGCGGGAGGGCTTCGTTTTTAG---ATGT
TTTTTTGAGTTTTGTTAGGATTTGTGCCATGCTCAG-----------------GAAGATGAGGTGGAGGCGACTTCTTGA
AGATGGAATAAGGTCCTCCCCATCTAGCCCCGTCTC-GGCGATATTTCTAGCATTGTCAGAGGGCGTGTGGAGGTGTGTC
TCCAGCGCATCTCGTGGGATCTGGTCGGCGTTTGTCTTTGGTGGATCAGTTTGGATCTGGTCTTCGTTAGTCTA------
TGTGTCTGCAGGTTGGATACTTCCAGTCTAGATGTCTCTTGATTGGCGGTGGTTGCTGTTCTGGTGCGCTGGTCTTATGT
AGCCTTAGCACGATGACTTCCCGACTCTCTACTACAACAATGTTTGCCCGAC-TCGAATGAGGGAGGGGCGATGACGGCG
ACGCGCCTTCGGCTCGCTCCAGTGCTTGTAGTCGTCGCTAGGTGGTCTATTGACCTGAATATAATTTTTAT---TTCTCG
TATTCTTTGTACTACCTTGACTGTTGATGAATAGATTGGAAGTTTTT---------------------------------
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>chr5B_262
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-----------------------------------------------CTAGCATCATCGAAGAGCATGTGGAGGTTTGTC
TCCGATGGATCTCACGGGATTCAGTCGGCGTTT-TCTTCGATGGATCCGCTTGGATCCAGTCTTTATTCGTCTATGTTGG
TGTGTCTACAGATTGGATCTTTTTGATCTACGCTTCTCTTCATCGACGACGGTTGCTATTCTAGTGCGCTGGTCGTATGA
GGTCTTAACATGACGACTTTCCGACTGTCTACTACGACAAGGTTTGTCCGAC-TCGAGTGATGGAGGGGCGATGATGGCA
GCGCTTATTCGGCTCGCCCCAGTGCTTGTAGTCGTCGCTAGGTGGTATACG-ATATGGATTTAATTTTTAC---TTCTGT
TATTTGTACTA-TATCTTGATAGTCGACGAATAAATTAGAAGTTTTTAAAATAACAAAAACAATTAATTTTATATGCTAA
AAAAAGGGAGAGAAAACTCAAAAGTAGTTAAAACACACACGAGGCGTCCGTCCGAAAAACATAATACACCAGGCGTATGC
AAGTTGGGTACGGCTTTGCGGTAGAAATTGGAATCCGCTTCGAGTAGGTTTACGTAATATCCCCAAATACGCCTTACGAG
CGGATTATTA--TACGGTAAATAAACCT-CCGTCTTTGCGCAGGATCGTGGGACGG----AAGAGAGAGA----------
--GGGA------------------------------------AGGACAAAGCGAGAACACAAAACGAGACTCGGCGGCGG
TGGTGGCCAGGGAGAAGCAGCACAAGGATGGTGTTCGGCCGGGGCAAGCAATCCTCGTCCACGCCCTCCCCGGCGGCCGC
CACCTCGTCGGCTGCCGCGGCGGCCTGCTCCGACCTCCGGGCGGCGTACCACGAGTGCTTCAACCGGTGGTACGCCGACA
AGTTCGCCAAGGGCCAGTGGAACAAGGACGACTGCGCCGCCGACTGGCACAAGTACCGCGCCTGCCTCGAGGTAAACCTA
GCCCACGCCCGCCAACACCCCCCCTCGCCCCAACCACACCTCGCTATCGTTGCTTGCCGGTTAGATTGGATCACCGGTTT
GCTATGCGCGCGGTAGAGATC-CCCCACCATTGACCGCCTAGTTTTCTCTGATGGGGCTCCCTGAGGTGATATTTTCCAG
AGATATGGATTCCTGATTATGAAGATCTTATAGTTTAGGCTGAGATAATTCCAGTCCTGGGACTGGGAGGCATAAATTTC
ATGTAAGATTTGGAGTT-CTTGTTTAGGAAGATATTTGAGGAGGGACTGTCTCGGTTATGTCGCTTTTTTAACTGCGTTG
GCTTAAGGTGGGTAT--------TCTGGGGAGAATGTGAGAATCATCATAGTAGGGGGGGCTTATGGCAGTCAGGTGTTA
TGTTGCTTATGATCTTGATTTGGATTGCGCTGCGGTCCTCATGTTGCAAATGTGGGATCCGGCGGCTATTGTGTGCAATG
TCAGTTCAGAGCACTTA--TGTGGACAAGCAATGTAGGTTAACAAGGACGCTCTTTCT----------------------
-ACCCAAAAAGGTTATTGCCTAAAAACAGAGA--TTATTAACCTTGTAT--CCTGTTTGAATAGCCGGAGCGATTGAGCT
TGCAAGACTGTGCTAGTTCCGGCATTTGCATGGCAAAGCAGTTAATTGATATCGCAGGGGAGCTCAGTCTGTAGAGAGTT
AACCAACAATGAATTTTTTTTGG-TGGATAAAAGGGGCCAAAGTAACCAGCAAACCCTTCTATGCTTACATCCCAGGCTA
CACCAAAAACGGATCTTGTTAAAACCATTTGCAGTTACAGGTGTTCTTATTTTGCTTATTGGCTGCTGTTAGGTTGTTTT
CTAGGCA-------------------------------------------------------------------------
------AGTATTGGTCATAACTGGTGCGATGCTGGTGAGAATTTGGGA-ATGGTTGGTAGGCATTCTGGTTGCTTACTGA
CTGCCAACCCAGCAAAAGATCTGCTATTTCTTAGGAAAACTCACTGTTGTCAATTTCTATTGCTGAACGGACTGTCTTTT
TT-TTTCACTTGCACAGTTGCAAGTCAATTGTTCTCCATGAC--------------------------------------
-----------TTATATAGTGTAAATAGCAATGATGTGTGTTCTGTAAAACTGGTGGTTATATCAAATCGTACCAGATCG
ATGGTTCACAGCCTTGTGCTTTTTGTTTGCAGTAATTTGCTGTTACTGCAAGGAACAAAAACTTCTTACCACCCCAATGT
ATTTAATTAGTTTATTTATAGGG-AAAGTTCTCAC----TTTGTCAAAATTCGGTCTGTATCTGTGTTATTTACCTCTTC
AGTTGTCCATGTTGCCATATAGTATCTGTGTGTTACAAGAATGATTGTTCAGGAATTGAGTTCAACAAAGTGGTTTCAT-
--------TCACAAAGCACTGTTGTATCGCACG---ATGAGTGTTCAACATACACCAGTACCCTGTTTTCTTCACTACGA
CATAAGCAATCTGTCGTATCTTGCATTTCAGT--CATTTAGGTTTAAATTTTGTGATTTAATGTTGCGTGTTTCTTGCTT
ATCTAATGGCTGATCGTTCCATGTTTTAATTGTTTCTAGGAACATCTCGAGGACAAGCATCTCAGGCAAATCCTACTGGA
GCCGGAAACGTCTCCCTCTTATGCCCAGCTTGATCCGGATTCTTCATCAAGACAAGGTGCCACCCCTTCAAAATGACAGT
CTTGGACTAACAACATGGTCGAGTTCTTTGCCTGATCAAAATTCGGAGACCGTTGATAGAGTGAACCACAAAGTCTGTAT
TTGGATACATGTTATGTCCCTGGATCCTGTCAATTTCAGCTCATGAGATTAACTTGTAAAATTTGCTTGGATCTGACTG-
-----------------TACTCA------------------ACCAGGCAATAGTTTGTAAATACTGAGCAGTTATGGATT
ATGAAATTAGTTGAATAGTATCAGCTGTCCAGGTTCTGTAACACTGTTTCACGCACGCTTCTTCCAGTCAAAGGGTGGGG
TGTAGATTAAATCTGATCATCTGCTGTGATGAGAAACAAATCACTGATATTTCGAATAAGTAGACAGGGAGAGGGGGGTT
GCAT----------------------------------------------------------------------------
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------AAAA-ACAAAAAATGG-AAAACCCAGATGTAGGCAAACGA----TGTAGAAATAAATCAATTGGTTACGTAAAT
GTCCAACTGGATCTTGTATCAAAATTCGTTCTCACTTCTCCTGCATGGTGCATAAATATCCAACTGAATCTTATATCCAA
ATTTGTTCTTAACATCTTATATTATGGGACGGAGGAAGTAGGCAACAAGCAGTCCTTGTTGTAGGATGCAAATTTGTTCT
TAACATTTTATATTATGGGACGGAGGAAGTAGGCAACAAGCAGTCTTTGTTGTAGGATGCAAATTTGTTCTTAACATCTT
ATATTATGGGACGGAGGAAGTAAGCAGTTCTTGTTGTCGGAGGATGGCGATTCGATGCGGTTTCTTTCTGGCGGTAAGAG
AAAGGCGTACGTGTCCTCGACAGTGCGGGTCTTGTGGGTAGTGAGGTTGAACAGGTGTGCCCTTTTGTGGGCATGTTGTG
ATGGTTTTCGCCGAGTTTTCGCAAATTAATCGAGCAACCCTCTTCTGCTTATTTAATGAATCGGAGTCCTATAAGTGGCA
TGACTTCAAAAAAAA-----------------------------------------AGTAGCAAAGAAGCTGATACATGT
GTGTTGTAGTCCAATAGCAGCGAGGGATGAAGAAGAGCCAGGGGCTCTACCTCTACTCCTCCATCCTGATGACGCAGCGC
AGGCCTTCCCCCTTGAG
>chr5A_685
--------------------------------------------------------------------------------
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------------AAAACTCAACAGTAGTTAAAAGCCACACGAGGCGTCCGTCCGAAAAACATAATACAGCAGGCGTATGC
AAGTTCGGGACGGCTTTGCG----AAATTGGAATCCGCTTCGAGTTGGTTTACGTAATATCCCC-AATACGCCTCATGAG
TCATGACCGGATTACGGTAAATAAACCT-CTGTCTTTGCGCAGGGTCGTGGGACGGACGAAAGAGAGAGAGGGAATCAGT
CAGGGA------------------------------------AGGACAGAGCGAGAACACAAAACGAGACTCGGCGGCGG
TG---GCCAGGGAGAAGAAG---AAGCATGGTGTTCGGCCGGGGCAAGCCGTCCTCGTCCACGCCCTCCACGGCGGCCGC
CACCTCGTCGGCTGCCGCGGCGGCGTGCTCCGACCTCCGGGCGGCGTACCACGAGTGCTTCAACCGGTGGTACGCCGACA
AGTTCGCCAAGGGCCAGTGGAACAAGGACGACTGCGCCGCCGACTGGCACAAGTACCGCGCCTGCCTCGAGGTAAACCTA
GCCCACGCCCCCCCT--CCACCCCCCGCCCCAACCACAGCTCGCTATCATTGCTCGCCACCTAGATTGGATCGCTGGTTT
GCTATGCGCGCGGTAGAGATCCCCCCGCCATTGACCGCCTAGTTTTCTCTGATGGGGCTCCCTGAGGTGATGTTTTCCAG
AGATATGGATTCCTGATTATGAAGATCTTGTAGTCTAGGCCGAGGTAATTCCG-----------GGGAGGTATAAATTTC
GTGTAAGATTTGGAATTGCTTGTTTAGGAAGATATTTT--GAGAGACTGTCTCGATTATGTCGCTTCTTTAATTGGGTTG
GCTTAACCGCTTAAGGTTGTTACTCTGGGGAGAATGTGAGAATCATCATAGTAGGGGGG-CTTATGGCGGTCAGTTGTTG
TGTTGCTTATGATCTTGATTTGGATTGCGCTGCAGCCCTCATGTTGCAAATGTGGGATCT---GGCCATCTTGTGCAATG
ACAGTTCAGAGCACTTA----TGGACAAGCAATGTAGGTTAACGAGGATGCTGTTTCTTGTTAATTTTTATCCACTCTTC
AACCCAAAAAGGTTATTGCCTGAAAACAGAGGA--TATTAACCTTGTAT--CCTGTTTGAATAGTCGGAGCAGTTGAGCT
TGCAAGACTGCTAGTTCCATCGCATTTGCATGACAATGCAGTTAATTGATATCGCTGGGGAGCTCAGTCTGTAGAGAGTT
CACCAACAACGGATTTTTTTTTTTTGGATAAAAGGCACCAAAGTAACCATCAAACCCTTCTACGATTACATCCCAGGCTA
CACCGAAAACGGATCTTGTTAAAAACATTTGCAGTTACAGGTGTTCTTATTTTGCTTATTGGCTGCTGCTAGGTTGTTTT
CTAGGTAAGTACTCCCTCTGTCTCAAAATGTAAGACGTTTTCACTATGATAGTACCAAAAAACGTCTTGCATTTTGAGAC
AGAGGGAGCATTGGTCATAACTGGTGCGATGCTGGTGATAATTTGGGACATGGTTGGTAGGCATCCTGGTTGCTTAGTGA
CTGCCAACCCACCCAAAGATCTGCTATTTCTCAGGAAAACCCACTGTTGCCAATTTCTATTGCTGAACGGACTGTCTTTT
TT-TTTCACTTGCAGAGTTGGATGTCGA---------------------------------------------TTGTTCT
TCATGACTTAATTATTTAGTGTAAATAGCAATGATGTGTATTGCATAAAATTGGTGGTTATATCAAATCGTACCAGATTG
ATGGTTCACAGCTTTGCG-TTTTTGTCTGCAGCAATTTGCCATTACTGCAAGGAAAGAAACCTTCTTAACACCCGAATGT
ATTTAATTAGTTTGTTTATAGATAAAAGTTCTCAAAAAAATATTCAAAAATCGGCCTGTGTC--TGTTATTTGCCTCTTC
AGTTGTCCATGTTGTTGTCATATATCTGTATTTTACAAGAATGATTGTTCAAAAATTGAGTTTGACGAAGTTGTGTTCAT
TCACATAATCACAAAGCACTGTTGTACATAA---CAATGAGTGTTCAACATGCACCAGTACCCTGTTTTCTTCATTTCCA
CATAAGCAATCTGTATTATCTTGCATTTCACAGCCATTTAGGTTTAGGTTCTATGATTTAATGTTGCGTGATTCTTGCTT
GTCTAATGGCTGATTGTTCCATGTTTTACTTGTGTCTAGGAACATCTCGAAGACAAGCATCTCAGGCAAATCCTACTGGA
GTCGGAAACATCTCCCTCTTATGCCCAGCTTGATCCCGATTCTTCGTCACGACAAGGTGCCACCCCATCAAAATGACAGT
CTTGGACTAACAACATGGTCGATTTCTTTCCTTGATCAAAATTCGGAGACGATTGATAGAGTGAACCAGAAAGTCTGTAT
TTGGATACATGTTATGTCCCTGGATCATGTCGATTTCAGCTCATGAGATTAACTTGTAAAATTTGCTTGGATGTGATTGC
ACTCAACTTACAAAGTATACTCA------------------ACCAAGCAATAGTTTGTAAATACTGAGCAGTTCTGGATT
ATGAAATTAGTTGAATAGTATCAGCTGTCCAGGTTCTGTAACACTGTTTCACGCACGCTTCTTCTAGTCAAAGGATGGGA
TGTAGATTAAATCTTATCATTTGCTGTGATGAGAAATAAGTCACAGATATTTCGAATAAGTGGACAGGGAGAGGGGG-TT
GCAT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AAAAGTCAAGAAATAAAAAAACCTAGATGTAGGCAATGGA----TGTAGAAATAAATCAATTGGGTACATAAAT
GTCCAACTGGATCTTATATCAAAATTGGTTCTCACTTCTCCTGCATGGTGCATAAATATCCAACTGAATCTTATATCCAA
ATTTGTTCTTAACATCTTATATTATGGGAGGGAGAGAGTAGTAGGCAA--------------------------------
--------------------------------------------------------------------------------
----------------------------TCTTGTTATCGGAGGATGGCAATTCGATGCGGTTCTGGCTGCAAGAAAAAAG
GCTTAC------GTCCTCGACAGTGTTATGA--GTGGGTAGTGAGGTTTGACAGGTGTGCCCTTTTGTGG----------
-TGGTTTTTACCGAGTTTCCGCAGATTAATCGAGCAACCCTCTTCTGTTTATTTAATGAATTGAAGTCC----------A
TGACTTAAAAAAAAGTACCTCATCTGTAATAAAGAAATATATTTCTTTACAGAGGGAGTAGCAAAGAGG-TGATACATGT
GTGTTGTACG---ATAGCAGCGAGGGGT---GAAGAGCCAGGCGCTCTACCTCTACTCCTCCATCCTGATGACGCAGCGC
AGGCCTTCCCCCTTGAG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S-------S-SS--SSSSS----------------
-------S------------------S--------------S------------------------------------S-
--------------S-S-S-----------------S------S--SSSS-S-------------------S-------S
------------S-------------------------S-----------------------------------------
--------------S-----------S------SS----------------------------S----------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S-----------------------S-----------------------S--------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------SS----------SS--SSSSS-------------------------------S-------------------
---S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------
--------------------------------------------------------S-----------------------
------------S--------------------S----------------------------------------------
--------------------------------------------------------------------------------
-----------S--------S-----S--------S-S------------------S----------------S------
--S---------SSSS---SSS--------------S-------------S------S----------------------
-S-----S------------------------SS--------------S-------------------------------
----------------S----------------------------------S------------------S-----S---
--S---------------------------------------------------SS------------------------
---------------S--------------------------------------------------S-------------
S----S--------S--SS-----------------------------------------------S-------------
--------------------------S-S-S--S---------------SS---S-S-S---------------------
-----------S---------S---------------------------S---S--------------------------
------------------S------------------SSSSSSS-S----------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------S-----------
------------------------------S--------------S-----------S----------------------
--------------------------------------------------------------------------------
--S----------------------------SSSS--SSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
---------------------S-----------SS--------S-----------------------------------S
--S----------------------------------------------------S----------S-------S-----
---------S------------------S-S--SS-SSS-----------------------------------------
-----------------------------------------------------------------S------S-------
---------------------------SSSSSSS------------------------------S---------------
----------------S------------------S--------------------------------------------
---------------S-----SS---------------------------------------------------------
---------------S--------------------------------S------------------------------S
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
-----------------------SSSSSSSSSSSSSSSSSS---S-----------------------------------
-----------------------------------S--------S--------------------------------S--
------------------------------------------------------------SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS----------------------------------S-----SSSS---S---------SS---------------
S-SS--------------------------S------SS-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S--------------S-----S--------------S---S
--S-----------------------------------------------------SSS------------S--------
----------S-------------------------------S-------SSSSSSSS----------------------
-----------------
>forward_21
-CTGCGCTAGGGTTTTCATGC-----------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>reverse_1374
--------------------------------------------------------------------------------
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-------------GGTAGAGATCCCCGCCATTG-----------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>forward_54
----------------------------------CTAGGGTTTCTGCTGCCTCC--------------------------
--------------------------------------------------------------------------------
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-----------------
>reverse_1970
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-------------------------------------------------CATCACAGGGGAGCTCAGTC-----------
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>forward_1779
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-------------------------------------------------------------------------------G
GCAGTCCAGAGCACCTATG-------------------------------------------------------------
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-----------------
>reverse_3405
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--------------------------------------------GGTTTCACGCACGCTTCTTC----------------
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-----------------
