>input_sequence_42898
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----------------------------ATGCCGTGCTCGCCAGGGCCCCGCCGCCGCCCGCCGGCGGCGGTGCCAATCA
GCGCCGTCCTGCTCCGGCAGCTTCGGATCGCGGCCGGCCAGGGCTCCCCGCGCCGCCTCCTCCTGCGGTCCCTGGCGCTG
GTCCTCACCTCCAACCTCTCCTCCACCCACGCCGCCGTTTCCTCCCGCCTCCTCAACTCGCTCCTCCCTCACCTCCCCGC
CGGCCGCCTCCACCTCCTCCGCCTCCTGCCCTTCGACCACCTCACCCTCCTCCTCCTCTCCTCCTCCTCCGGCCCCACGC
GA------------------------------------------------------------------------------
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----------------CCCGCCGTGTCCGCGCTCCACGCGCTCGCCGTCCGCTCCGGCCACCTGCCCGCCGACCTCCGGC
TCGCCAACTCGCTCCTGGCGCGCTACCTCGCGCTCGGCTCCCACGCCTCCGCGCGCCGCCTCTTCGCCGACATCCCGCGC
CCCGACGCCGTCACCTGGAACACGCTCCTCCGCGCCTGCCTCCGCTCCGGCCTCCTCCCCTCCGCCCGCCAGCTGTTCGA
CCAAATGCCGCAGCGGGACCTCGTTTCCTACAACTCCATGCTGTCCGGCCACGCCGCGGCCGGGGACATGGCCGGCGCGC
AACAGCTGTTCGATCAGATGCCCGAGAGGGACGTGGTCAGCTGGAACTCGATGCTTGGTGGATATACCCGCCTCGGAGAC
ATGGAGGAAGCCAGGAGGATGTTCGACGCGATGCCGGAGAGGGACGTCGTGTCGTGGAACTCGATGCTGGACGGGTACGC
GCAGGCCGGGGACGTCAAGATGGCGAGGGCCATGTTCGACGGCATGCCGAGGAGGAGCGCCGTGTCCTGGAACGTCGTCC
TGGCGCTGTACGCGCGGGTGAAGGACTGGCGGGAGTGCCTGAGGCTGTTTGACGCGATGATGGCGGTGGGGGCCGCCGTG
CCGAACGAGAAGACCTTCGTGAGCGTCCTGACGGCCTGCGGCAGCCTGGGCGACCTCGAGAGGGGGAAGTGGGTGCACGG
CCTGGTCCGACAGAGGTGGGAGAGGATCGTGCCGGACGTCCTCCTGCTCACGGCGCTGCTGACGATGTACGCCAAGTGCG
GGGTGATGGAGACGGCGAGGGAGATCTTCGACTCGATGGGCGAAAGGAGCGTCCCGTCGTGGAACTCGATGATCATCGGC
CACGGGCTGCACGGGCAGAGCGAGAAGGCGCTCGAGCTATTCCTGGAGATGGAGAGGAGCGGGCCCAGGCCAAACGAGAC
GACCTTCGTCTGCGTCCTGAGCTCCTGCGCCCACGGCGGGCTGGTGCTCGAGGGCTGGTGGTGCTTTGACAGGATGGTCA
GGCTCTACGGCATGGAGCCCAAGGCAGAGCACTTTGGCTGCATGATGGACCTCCTCGGCCGCGCCGGGCTGCCCACAGGC
TCGGAGAACCTCGTCCAGAATTTACAAGGCAAGGCGTCCCCGGCGTTGTGGGGCGCCATGGTCTCG---G---CCTCTCG
GGCGCAGAACGGCTCCAGGCTCGGGGAGTTTGTGGGGAAGAAGCTGATCGAGATGAAGCCGGCGGAGGTCGGCCCGTACG
TGCTGCTCTCGAACATCTACGCGGCGGAAGGGAGGTGGGACGACGTCGAGAAGGTGAGGGAGATGATGAAGCGGGACGGG
GCTGAGAAGGACGTGGGGCTGAGCCTTGTGGG---ATCGAGCGAACCGGTGACCCGTCTTGGTACTGAAG----------
-----------------ACGGCGCG------------------------GTGGTGATGTCGATGCTGGGCGAGATGGGCG
CGCACCTGAAGAAGCCGGCGACCGAACCCCAGGAGCCCAAGTGCAGGGAGGGAAGGGATGCCACGAGGACCTGTTGTGCG
TGA-----------------------------------------------------------------------------
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-------
>chr7D_1_TraesCS7D01G024300
ATTTATATGCCTGAGGCAAATTTTTGAGGGCTTGAGTGTTGTATGTCCGAATTTAATTCCTTGAGAAGTAGAAGAATCTG
AGGAACTCGGATGCACTGTTAGTTTCTTGACGCCGCCATGGAGAGATTCCAGGAGCCAGCAGCTGTAAGATGTAAAAAA-
CGTACCCGCACTCTTCGAGAGCTCGTTGAATTCTCCGAGCATTGGTTTTTACCAGGAATGCGCTGTTCCATCATGCATAT
TTGTTATGAATCCGTATGTTGCTACCAAGCAGGAGTGATAGTGGACTTGTTCCCAAGGGTTTC-----------------
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----------AAGGAATGGGGCAAATGAAAA-ATGAAGGAGTTTTCATTTGATCCCATTTTTAAAGGAAAAATGTGGGAA
TTCCAACATTCACTTGGACATTTTTTCTT-------TCAAATTTCTATGCACGATGAACAAGGCTAATATCCTTATCAAC
ATAATGACATTCTAACTATATATTTTTATGTGTTTTAACTTTATTGGTAAAGGATGCAGCGGTACGAGCCTATAGAACAG
ATCCTGTTCAAGTAAGGTCGTTATGTG-TTTTGACTTTGATTTGATCATATGTATTAGAATTCACGTTCTTTTCCAATTC
CCGTGGACCAAAGCATCCAAATTGACAGAATTTCTAT--------ATTTACTATGTTTTGTACATACGTTCCTCTATTAT
TTCTGC--------------------------------------------------------------------------
-------------------ACTTTTAGAATCCTGCGAACCAAAGGAGCCCTAAAATTCCAACATCAATTTGATGATTATT
TTTTT------GCTTGAATTCAACGTGAGGATGTTCAAATTCTGACATGAATTCGATGAAAATCTCGCACTGCCATGTGG
CTGGCCTTCTCTTGTATTCCTCCAATTATACATTTTGTCCACTATGTTTACGTACTTTTTTCTCAGTAA--AAACCCGCC
TTCGCCTCCCGTTCACGTAAGAGAGAAGAATACGCCTCCTCAGCGTC-AACTGCCCGCCAA-GGTAACGAGACGGGCGGA
GCCCCATTTGCGCCACCGCCCGCCCACAATGCCGTGCTCGCCAGGGCCCCGCCGCCGCCCGCCGGCGGCGGTGCCAATCA
GCGCCGTCCTGCTCCGGCAGCTTCGGATCGCGGCCGGCCAGGGCTCCCCGCGCCGCCTCCTCCTGCGGTCCCTGGCGCTG
GTCCTCACCTCCAACCTCTCCTCCACCCACGCCGCCGTTTCCTCCCGCCTCCTCAACTCGCTCCTCCCTCACCTCCCCGC
CGGCCGCCTCCACCTCCTCCGCCTCCTGCCCTTCGACCACCTCACCCTCCTCCTCCTCTCCTCCTCCTCCGGCCCCACGC
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------CCCGCCGTGTCCGCGCTCCACGCGCTCGCCGTCCGCTCCGGCCACCTGCCCGCCGACCTCCGGC
TCGCCAACTCGCTCCTGGCGCGCTACCTCGCGCTCGGCTCCCACGCCTCCGCGCGCCGCCTCTTCGCCGACATCCCGCGC
CCCGACGCCGTCACCTGGAACACGCTCCTCCGCGCCTGCCTCCGCTCCGGCCTCCTCCCCTCCGCCCGCCAGCTGTTCGA
CCAAATGCCGCAGCGGGACCTCGTTTCCTACAACTCCATGCTGTCCGGCCACGCCGCGGCCGGGGACATGGCCGGCGCGC
AACAGCTGTTCGATCAGATGCCCGAGAGGGACGTGGTCAGCTGGAACTCGATGCTTGGTGGATATACCCGCCTCGGAGAC
ATGGAGGAAGCCAGGAGGATGTTCGACGCGATGCCGGAGAGGGACGTCGTGTCGTGGAACTCGATGCTGGACGGGTACGC
GCAGGCCGGGGACGTCAAGATGGCGAGGGCCATGTTCGACGGCATGCCGAGGAGGAGCGCCGTGTCCTGGAACGTCGTCC
TGGCGCTGTACGCGCGGGTGAAGGACTGGCGGGAGTGCCTGAGGCTGTTTGACGCGATGATGGCGGTGGGGGCCGCCGTG
CCGAACGAGAAGACCTTCGTGAGCGTCCTGACGGCCTGCGGCAGCCTGGGCGACCTCGAGAGGGGGAAGTGGGTGCACGG
CCTGGTCCGACAGAGGTGGGAGAGGATCGTGCCGGACGTCCTCCTGCTCACGGCGCTGCTGACGATGTACGCCAAGTGCG
GGGTGATGGAGACGGCGAGGGAGATCTTCGACTCGATGGGCGAAAGGAGCGTCCCGTCGTGGAACTCGATGATCATCGGC
CACGGGCTGCACGGGCAGAGCGAGAAGGCGCTCGAGCTATTCCTGGAGATGGAGAGGAGCGGGCCCAGGCCAAACGAGAC
GACCTTCGTCTGCGTCCTGAGCTCCTGCGCCCACGGCGGGCTGGTGCTCGAGGGCTGGTGGTGCTTTGACAGGATGGTCA
GGCTCTACGGCATGGAGCCCAAGGCAGAGCACTTTGGCTGCATGATGGACCTCCTCGGCCGCGCCGGGCTGCCCACAGGC
TCGGAGAACCTCGTCCAGAATTTACAAGGCAAGGCGTCCCCGGCGTTGTGGGGCGCCATGGTCTCG---G---CCTCTCG
GGCGCAGAACGGCTCCAGGCTCGGGGAGTTTGTGGGGAAGAAGCTGATCGAGATGAAGCCGGCGGAGGTCGGCCCGTACG
TGCTGCTCTCGAACATCTACGCGGCGGAAGGGAGGTGGGACGACGTCGAGAAGGTGAGGGAGATGATGAAGCGGGACGGG
GCTGAGAAGGACGTGGGGCTGAGCCTTGTGGG---ATCGAGCGAACCGGTGACCCGTCTTGGTACTGAAG----------
-----------------ACGGCGCG------------------------GTGGTGATGTCGATGCTGGGCGAGATGGGCG
CGCACCTGAAGAAGCCGGCGACCGAACCCCAGGAGCCCAAGTGCAGGGAGGGAAGGGATGCCACGAGGACCTGTTGTGCG
TGACAG--CAGCAACGCAGAGCATGTTGCAGGATTACTACGCCTCGCCGTTGATCATCACGGAGCATCAGATTTCCTGCT
GGTGCGTGTGGTCCTCTGTCGTCATGCCA-GC-CAGGGCCAGCATTGCAGCAGCAGCAGCAAAGCAAGACGAGGGGTAGC
CTACTGCTGGGTGCTGGCTGATGAGCAAGCGATGGAATAAGGCAGAAAACACGTTTGGACTTTGGAGGTGG---------
---------------------------GCCAATGAATGGTCGATGGAGAAGGTGCCCGGCTGGCT-GCTCAACTGATCTG
GCCGGCGATGTGATGTTGCTCTGCTCTGCTCAACTGACCTGGCCGGCGATGTGATGTGAGTCTGTGACAAGTGAAGATGG
TGACGATGATTGCGTCAGTCAGCTGACCGTGGTGTCGGCAAGGCAGGGAGAGGCGAGAGCGACG-GGCGTCTGCTGCAAG
------------------------AACGTGGACGG------------GCATTCGGATCTGTGGAAAGAAAGACGAGGGGA
AAAGGAACATGACAAGTGCTATGAGCATATTCGATCTCCTGGC-----AACCATATGCGTCCAGCGTTTTCACGAGCAAC
TGAAATCTCTTCCAACAGGAAAAAATGTT-TCATGCCTAACATTTTTTTTTGGTCTCCAAGTAACAGTAGAATTGTTGCA
ACCATAATTTCGACTGTTTTCTG--TCTTGTACCATTATTATGTAATCATGTGG---GCCCGACCTGGCAGCGAGGCGGC
GCCTTGGCCCCACTTGCAGGTTGCCAAGGG--AAAAAAAGAG--------------------GAGGAGCAGCCGAAGACG
AGGCCAGGCAGGCAGCAGTCCAGGAAATCAGGGATCTATCGGATCCACCGCCGTCCGTCCGTCCGTGCGTCCTATAAGAC
GAGCCACCGCCCCTC-------GCCCAGATTCCCAAATTCCTCCATCGACCTGCCTGCCTGCCTTCCGCG------AGAG
TCCTCCACTCCACAACAACCATCGAGAAGGAGCGCGCGCGCGCGCACGCACGGAGGCGGCCGCGATCTCTCGCCCACCCA
CCACTCG
>chr4A_1
ATTTATATGCCTGAGTCAAATTTTTGAGGGCTTGAGTGTTGTATGTCTGAATTTATTTCCTTGAGAAGTAGAAGAGTCTG
AGGAACTCCGATGCACTGTTAGTTTCTTGACGCCGCCATGGAGAGATCCCA------AGCAGCTGTAAGATGTAAAAAA-
CGTACCCGCACTCTTCGAGAGCTCGGTGAATTTTCCGAGCATTGGTTTTTACCAGGAATGCGCCGTTCCATCATGCATAT
TTGTTATGAATCTGTATGTTGCTACCAAGCAGGAGTGATAGTGGACTTGTTCCCAAGGGTTCAAGATGCATTTGCATATA
T-TAGTGTATGATCCTGATGGTTGTTACTCACCATCAGTTTCAGCTGCAGAGACAGCAAGTTCTTATCAAGTTACTAACT
TACCATTTGCAATACATCTTGCTTGGAAACCTCTAGAATTTTTTTTGCTATCAAGTTACTAACTTACTATTTGCAAATAC
ATCTTGCTTGGAAACCTCCAGATTTTGCATGAATCGACGTGTCTGTTAAAAGGCTACTTTGGTTGGAATGATCAGTGGAG
GAAAACCATTGAATATGAAATTTTTCTGTAATGA----TACTATTCATGCCTTTGGTTCAGAGGAATGGGGGAGCGACTA
GTATAAAATCTGAGTGTAGTGTGCAAAAATAGAAAAACAGAGCTGGGGAGTGGGGCAAAAGAAAAATGAGGAGTTTTCGC
CTTTGGTTCAAAGGAAGGGGGCAAAGGAAAAAATGAAGGAGTTTCCATTTGATCCCATTTTAGAAGGAAAAACCCGGTAA
TTCTAACATTCACTTGGACATTTTTCTTAAAC-------AAATTCTATGCACGATGAACAAGACTA--------------
------------------TAATTTTTT-----------------------------------------------------
---------------------TACGTGTTTTTAACTTTGATTTGATCATATTTATTAC--------------TCCAATTA
CCGTGAACCAAAGCATCCAAGTTGACAGAATCACATAATTTCTAAGTTTACTATGTTTTGTACATACATGCATCTATTAT
TTCTACTCCCTCTGTTCCGATTTACTCGTCGTGGTTTTAGTTCAATTAGTTCAAATTTGAACTAAAACCACGACGAGTAA
ATCAGAACGGAGGGAGTATATTTTTAGAATCCTGCAAACTGAACGAGCCCTCAAATTCTGAGTTGAATTTCATG-----A
TTATTATTTTTGCTTGAATTCAACATGTGGCTGTTCAAATTCTGACATGAATTCGGTGAAAATCTCGCATTGCGACGTGG
CTGGCCTTCTCATGTATGCCTCCAACTATACACTTTCTCCGTCATATTTACGTATTTTCTGGT--------AAATCCGTC
TTCGTCTGCCGTTCCCGTAATGTAGATAT-TACGCCTCCTCGGTGTCAAACTGCCCGCCAAAGGTAACGAGACGGGCGGA
GCCCCATTTGCGCCACCGCCCGCCCCCAATGCCGTGCTCGCCAGGGCCCCGCCGCCGCCCGCCGCCGGCGGTGCCAATCA
GCGCCGGCCTGCTCCGGCAGCTTCGGATCGCCGCCGGCCAGGGCTCCCCGCGCCGCCTCCTCCTGCAATCCCTGGCGCTG
GTCCTCACCTCCAACCTCTCCTCCACCCACGCCGCCGTCTCCTCCCGCCTCCTCAACTCGCTCCTCCCGCACCTCCCCGC
CGGCCGCCTCCACCTCCTCCGCCTCCTCCCCTTCGACCACCTCACGCTCCTCCTCTTCTCCTCCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCCGCCGCCAACCGCCG
CCCCATCACCCCCCTCCCCGCCGCCTCCTCCCTCCACGCGCTCGCCGTCCGCTCGGGCCACCTGCCCGCCGACCTCCGGC
TCGCCAACTCGCTCCTCGCGCGCTACCTCGCGCTCGGCTCCCACGCCTCCGCGCGCCGCCTCTTCGCCGACATCCCGCGC
CCCGACGCCGTCACCTGGAACACGCTCCTCCGCGCCTGCCTCCGCTCCGGCCTCCTCCCCTCCGCACGCCAGCTGTTCGA
CCAAATGCCCCAGCGCGACCTCGTCTCCTACAACTCCATGCTGGCCGGTCACGCCGCGGCCGGGGACATGGCCGGCGCGC
GGCAGCTGTTCGACGGGATGCCCGAGAGGGACGTGGTCTCCTGGAACTCGATGCTGGCCGGGTACACACGCTGCGGAGAC
ATGGAGGAAGCCAGGAGGATGTTCGACGCGATGCCGGAGAGGGACGTCGTGTCATGGAACTCGATGCTGGACGGGTACGC
GCAGGCTGGGGACGTCAAGATGGCGAGGGCCGTGTTTGACGGCATGCCGAGGAGGAGCGCCGTGTCCTGGAACGTCGTCC
TGGCGCTGTACGCGCGGGTGAAGGACTGGCGGGAGTGCCTGAGGCTGTTTGACACGATGATGGCAGTGGGGGCCGCAGTG
CCGAACGAGAAGACCTTCGTGAGCGTTTTGACAGCCTGCGGCAGCCTCGGCGACCTCGATAGAGGGAAGTCGGTGCACGG
CCTGGTCCGGCAGAGGTGGGAGAGGCTATTGCCGGACGTCCTCCTGCTCACGGCACTGCTGACAATGTACGCCAAGTGCG
GGGTGATGGAGACCGCGAGGGAGATCTTCGACTCGATGGGCGACAGGAGCGTCCCGTCCTGGAACTCGATGATCATCGGC
TACGGGCTGCACGGGCAGAGCGAGAAGGCGCTCGAGCTGTTCCTGGAGATGGAGAGGAGCGGGCCTAGGCCGAACGAGAC
GACCTTCGTGTGTGTCTTGAGCTCCTGTGCCCACGGCGGGCTGGTGCTTGAAGGCTGGTGGTGCTTCGACAGGATGGTCA
GGCAGTACGGCATCGAGTCCAAGGCAGAGCACTTCGGGTGCATGATGGACCTCCTCGGCCGCGCCGGGCTGCTCACAGGC
TCAGAGAACCTCGTCCAGAATTTACAGGGCAAGGCGTCCCCGGCGCTGTGGGGCGCCATGGTCTCG---GCCTCCTCTCG
GGCGCAGGACGGCTCCAGGCTCGGGGAGTTTGTGGGGAGGAAGCTGATGGAGATGGAGCCGGCGGAGGTCGGCCCCTACG
TGCTGCTCTCGAACATCTACGCGGCGGAAGGGAGGTGGGACGACGTGGAGAAGGTGAGGGAGGCGATGAAGCGGAACGGC
GCCGAGAAGGGCGCGGGGCTGAGCCTGGTGGG---AGGCGGCGGATCGGAGCCCCGCGTTGGTGCCGAGGACGGCGTCTC
GGTTGGAAGGCGGGATGATGGCGTG------------------------GTGGTGCTGTCGTTGCTGGGCGAGATGGGCG
CCCGCCTGAAGGCTGCCGTTTG--------AGGTGGCCCAGTGCTGGGACGTGAGGGCGTGAGGAGCTGCGTGCGC----
--------------------------------------------------------------------------------
---GTGTGTGCTCCTTTGGCGTCGTGGCA-GGGCAGGGCCGCCGGCGTTGCTGCGGCGGCGAAGGGAGCCGAGGGTGACT
G-AC-------TGCTGGCTGATGGGCAGGCGGTGGAATAAGCCAGAAAACACGTCTGGAGGTGGACCGGTGGCAGTGGTC
TGAGGTGCTTGTACTCTTCCAGCTCTTGCCAGTGGATGGACGATGGAGAAGGTGCCCGGCTGGCT-GC------------
-------------------TCTGCTCTGCTCAACTGATCTGGCCGGCGATGTGATGTGA--------TAAGTGAGGACGG
TGACGA-----------------TGACCGTGGTGTCGGCAAGGTAGGGAGACG-GACGGACGGGCGGCGTCTGCTGCAAG
GCGCAAGAGGTATTTGTTCCCTGGAACGTGGACGGGTGGCGGTGTTTGCATTCGGATCTGTGGAAGGACAA---ATGGGA
AAAGGAACATGAAAAG------GAACATATTGGATCTCCTTGCTGGCAAACCATACGCGTCCAGCGTTTTCACGACCAAC
CAAAATCTTTTCCAGCAAGAAAAATCGTA-TCATGGCTAACATTTGTTGCAACCACATTA--------------------
----------------TTTTTTTTATCTTTTGCCATTATATGTAAGTCATCCTGCAAGCCCCACCTGGCGGCGAGACAAC
GCCTTGGCCCCACGTGCAGGTTGCGAGGGAGAAAAAAAAGAG--------------------GAGGAG------------
-----AGGCAGGCAGCAGCCCAAGAAATCAGGGGTCGATCGGATCCACCG----CCGTCCGTCCGTGCGTCCTATAAGAC
GAGCCACCGCCCACCGCCCCTTGCCCAGGTTCCCACAATCCTCTTCCTCCA------CCTGCCTTCCGCG------AGAG
TCCTCCACTCCTCAACAACCATCGAGAACAAGCGCGCG------------------------------------------
-------
>chr7A_6
-----TATGTCTGAAGCAAATTTTTGAGGGCTCGAGTGTTGTATGTCCGAATTTAATTCCTTGAGAAGTAGAAGAATCTG
GGGAACTTCGCTTCAATGTTAGTTTCTTGACGCCGCCATGGAGAGATTCCAGGAGCCAGCAGCTGTAAGATGTAAAAAAA
CGTACCCGCACTTTTCGAGAGCTCGTTGAATC------------------------------------------------
-TGTTATGAATCTGTATGTTGCTACCAAGCAGGAGTGATCGTGGACGTGTTCCCAAGGGTTTAAGATGCATTTGCATACA
TCTGGTGTATGCGCTGGATGGTTGCTACTCACCATCAGTTTCAGCTGCACAGACAGCAAGTTCTTGTCAAGTTACTAACT
TGCTATTTGCAATACATCTTGCTTGG------------------------------------------------------
-----------AAACCTCCATATTTTCCATGAATGGACGTGACTGTTAAGGGCTCT-TTTGGTTGGAATGATAAGTGGAG
GGAAAACATTGAATATGAAACTTTCCTATAATGATATGTACTATTCATGCCTTTGGTTCAGACGAATGGGG---------
-------------------------------------------------------CAAAAGAAAAATGAGGAGTTTTCGC
CTTCGGTTTGAAGGAATGGGGCAACGGAAAAAGTGAAGCAGTTTTCATTTTATCCCATTTTTAAATGAAGA------GAA
TTCTAACATCCACTTGGACATTTTTTCTCTTTCAAATCGAATTTCTATGCACGATGAACAAGACTAATATCCTTAACAGC
ATAACAACATTCTAACTATAATTTTTT-----------------------------------------------------
---------------------TATCTG-TTTTAACTTTGATTCGATCATATTTATTGGAATTAATGTTCTTTTCCAATTA
CCGTGAACCAAAGCATCCAAGTTGACATAATTTCTAT--------GTTTACCATGTTTCGTACAAACGTTCCTGTATTAT
TTCTGC--------------------------------------------------------------------------
-------------------ATTTTTAGAATCCTGCAAACCGAATGAGCCCAAAAATTCTGACATGAATTTAATG-----T
TTTTT------TCTCGAATTCAACATGAGCCTGTTCAAATTCTGACATGAATTCGATGAAAATCTCGCATTGCGATGTGG
CTGGCCTTCTCTTGTATTCCTCAAATTATACATTTTGTCCACTATGTTTACGTACTTTTTTCTCAGTAACAAAACCCGCC
TTCGCCTACCGTTCCCGTAAAGTGTCAAC----------------TC-AACTGCCCGCCAA-GGTAACGAGACGGGCGGA
GCCCCATTTGCGCCACCGCCCGCCCCCAATGCCGTGCTCGCCAGGGCCCCGCCGCCGCCCGCCGCCGGCGGTGCCAATCA
GCACCGGCCTGCTCCGGCAGCTTCGGATCGCGGCCGGCCAGGCCTCCCCGCGCCTCCTCCTCCTGCAGTCCCTGGCGCTC
GTGCTCACCTCCAACCTCTCCTCCACCCACGCCGCCGTCTCCTCCCGCCTCCTCAACTCGCTGCTCCCGCACCTCCCCGC
CGGCCGCCTCCACCTCCTCCGCCTCCTCCCCTTCGACCACCTCACCCTCCTCCTCCTCTCCTCCTCCTCCGGCCCCACGC
GA------------------------------------------------------------------------------
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----------------CCCGCCGTGTCCGCGCTCCACGCGATCGCCGTCCGCTCGGGCCACCTGCCGGCCGACCTCCGCC
TCGCCAACTCGCTCCTCGCGCGCTACCTCGCCGTCGGCTCCCACGCCGCCGCGCGCTGCCTCTTCGCCGACATCCCGCGC
CCCGACGCCGTCACCTGGAACACGCTCCTCCGCGCCTGCCTCCGCTCCGGCCTCCTCCCCTCCGCGCGCCAGCTGTTCGA
CCAAATGCCCCAGCGGGACCTCGTCTCCTTCAACTCCATGCTGTCCGGCCACTCCGCGGCGGGGGACATGGCCGGGGCCA
GGCAGCTGTTCGACGGGATGCCCGAGAGGGACGTGGTCTCCTGGAACTCAATGCTGGTCGGGTACACCCGCCTCGGAGAC
ATGGAGGAGGCCAGGAGGATGTTCGACGCGATGCCGGAGAGGGACGTCGTGTCATGGAACTCGATGCTGGACGGGTACGC
CCAGGCCGGGGACGTCGCGGCGGCGAGGGCCGTGTTCGACGGCATGCCGAGGAGGAGCGCCGTGTCCTGGAACGTCATCC
TGGCGCTGTACGCGCGGGTGAAGGACTGGCGGGAGTGCCTGAAGCTGTTTGACGCGATGATGGCAGTGGGGGCCGCCGTG
CCGAACGAGAAGACCTTTGTGAGCGTTCTTACAGCCTGCGGCAGCCTGGGTGACCTCGAGAGGGGGGAGTGGGTGCATGG
CCTGGTCCGACAGAGGTGGGAGAGGCTCGTGCCGGACTTCCTCTTGCTCACGGCGCTGCTGACGATGTACGCCAAGTGCG
GCATGATGGAGACCGCGAGGGAGATCTTCGACTCGATGCGCGAGAGGAGCGTCCCGTCATGGAACTCGATGATCATCGGC
TACGGGCTGCACGGGCAGAGTGAGAAGGCGCTCGAGCTGTTCCTGGAGATGGAGAGGAGCGGGCCTCGGCCGAATGAGAC
GACCTTCGTCTGCGTCCTGAGCTCCTGCGCCCACGGCGGGCTGGTGCTTGAGGGCTGGTGGTGCTTCGACAGGATGGTCA
GGCTCTACGGCTTCGAGCCCAAGGCAGAGCATTTCGGCTGCATGATGGACCTCCTTGGCCGTGCCGGGCTGCTCACAGGC
TCGGAGGACCTCGTCCAGAACCTGCAAGAGAAAGCGTCCCTGGCGTTGTGGAGCGCCATGGTTTCTTCAG---CCTCTCG
GGTGCAGAACGGCTCCAAGCTCGGGGAGTTTGTGGGGAAGAAGCTGATCGAGATGAAGCCGTCGGAGGTCGGCCCATACA
TTCTGCTCTCGAACATCTACGCCGCGGAAGGGAGGTGGGACGACGTCGAGAAAGTGAGGGAGATGATGAAGGAGAATGGT
GCTGAGAAGGATGTTGGTTTGAGCCTTGTGGG---ATCCAGCGAACCAGAGATCCGTCTTGGTGCAGAGG----------
-----------------ACGGCGTCTCAGTTGGAAGACGGGATGATGGCGTGGTGCTGTCGATGCTGGGCGAGATGGGCG
CGCGCCTGAA-GCTGCCGTTTG--------AGGAGCCCCAGCGCAGGGAAGCGAGGGCGTGAGGAGCTGCGTGCG-----
--------------------------------------------------------------------------------
--------TGTTCCTCTGGCGTCATGGCATGC-CAGGGCCAGCGCTGCAGCAGCAGCAGCGAAGGGAGCCGAGGGTGACT
G-AC-------TGCTGGCTGATTAGCAGGCGATGGAATAAGCCAGAGAACACGTTGGTTGGTGGGTCAGTGGCAGTGGTC
TGAGGTCCTTGTGCTC---CAGCTCTTGCCAATGGATGGAGGATGGAGAAGGCGCTCGGCTGGCTGGC------------
-------------------TCTGCTCTGCTCAACTGATCTGGCCGGCGATGTGATGTGA--------CAAGTGAAGACGG
TGACGG-----------------TGAT--TGGTGTCGGCAGGGTAGGGAGAGG-GAGAGCGACG-GGCGTCTGCTGCAAG
GCGCAAGAGGTATTTGTTCCCTGGAACGTGGACGGATGGTGGTGTTTGCATTCGGATCTGTGGAAGGACAA---AGGGGA
AAAGGAACATGACAAGTTCTGGAAGCATATTCGATCTCCTTACTGGCAAACCATATGCGTCCAGCGTTTTCACGGCCAAC
CGAAATCTTTTCCAGCAAGAAAAATCGTTTTCATTGCTAACATTTGTTGCAGGCACATTA--------------------
----------------TTTTCTG--TCTTTTGCCATTATGTACTCATCATATGG---GCCCCACCTGGCAGCGAGACGGC
GCCTTGGCCCCACGTGCAGGTCGCAAACAAGACAGAGAGAGGAGGAGGAGGAGGAGGAGAAAGAGGAGCCGCAGAAGACG
AGGA--------CAGCAGCCCAACAAGTCAGGGATCGATCGATCGGATCCAAC----TCTGTCCGTCCGTGCTATAAGAC
GAGCCACCGCCC---------------GGTTCCCAAATTCCTCCTCCGT-----CTGCCTGCCTTCCGCGACCGCCAGAG
TCCTGCACTCCACAACAACCATCGACAACAAGCGCCCGAGCAC------------GCGGCCGCGATCTCTCGCCCACCCA
CCACCCG
>chr5A_2082
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---TGATGGAGACGGCGAGGGAGATCTTCGACTTGATGACTGAAAGAAGCGTTCCGTCCTGGAACTCGATGATCATCGGT
TACGGGCTGCACAAGCAGAGCGAGAAGGCGCTCGAGCTGTTCCTGGAGATGGAGAGGAGCGGGCCTAGGCCGAACGAGAC
GACCTTTGTCTGCGTCCTGAGTTCCTGCGCCTATGACGGCCTGGTGCTCGAGGGCTGGTGGTGCTTCGACAGGATGGTCA
GGCTCTACGGCATCGAGCCCAAGGCCGAGCACTTCGGGTGCATGATGGACCTCCTCGACCGTGCCGGGCTGCTCACAGGC
TCGGAGAACCTCATCCAGAATTTACAAGGCAAGGCATCCCCCGCGTTGTGGGGTGCCATGGTCTCG---G---CCTCTCA
GATGCATAATGGCTCCAAGCTCGGGGAGTTTGTCGGGAAGAAGCTGATCGAGATGAAGCCGGCGGAGGTCGGCCCGTACG
TGCTCCTCTCGAACATCTACGCGGCGGAAGGAAGGTGGGACGACGTGGAGAAAGTGAGGGAGGCGATGAAGGAGAACGGC
GTTGAGAAGGACGTGGGGCTGAGCCTTGTAGGGGGATCAAGTGAACCAGAGACCCGCCTTGGCACTGAAG----------
-----------------ATGGCGCG------------------------GTGGTGATGTCGATGCTGGGCGAGATGGGCG
CGCACATGAAGAAGCCGCCGACTGAACCCCACGAGTCCAAGTGCAGGGAGGGAAGGGAGGCTACGAGGATCTGTTGTGCG
TGACACACCAGCAATGCAGAGCATGTTGGAATATTACTACGCCTCGCCGTTGCTGATCACGGAGCATCAGGATTCTTGCT
GGTATGTGTGGTCCTCTGTTGTCG-----TGC-CAGGGCCAGCATTGCAGCAGCAGCA---AAGCAAGCCGAGGGGTAGC
CTAC-------TGCTGGCTGATGAGCAAGCGGTGGAATAAGCCAGAGAACATGTTT------------------------
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>chr5A_2082
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---TGATGGAGACGGCGAGGGAGATCTTCGACTTGATGACTGAAAGAAGTGTTCCGTCCTGGAACTCAATGATCATCGGT
TACGGGCTGCACAAGCAGAGCGAGAAGGCGCTCGAGCTGTTCCTGGAGATGGAGAGGAGCGGGCCTAGGCCGAACGAGAC
GACCTTTGTCTGCGTCCTGAGTACCTGCGCCTATGGCGGCCTGGTGCTCGAGGGCTGGTGGTGCTTCGACAGGATGGTCA
GGCTCTACGGCATCGAGCCCAAGGCCGAGCACTTCGGGTGCATGATGGACCTCCTCGACCGTGCCGGGCTGCTCACAGGC
TCGGAGAACCTCATCCAGAATTTACAAGGCAAGGCGTCCCCCGCGTTGTGGGGTGCCATGGTCTCG---G---CCTCTCA
GATGCATAATGGCTCCAAGCTCGGGGAGTTTGTCGGGAAGAAGCTGATCGAGATGAAGCCGGCGGAGGTCGGCCCGTACG
TGCTCCTCTCGAACATCTACGCGGCGGAAGGAAGGTGGGACGACGTGGAGAAAGTGAGGGAGGCGATGAAGGAGAACGGC
GTTGAGAAGGACGTGGGGCTGAGCCTTGTAGGGGGATCAAGTGAACCAGAGACCCGCCTTGGCACTGAAG----------
-----------------ATGGCGCA------------------------GTGGTGATGTCGATGCTGGGCGAGATGGGCG
CGCACATGAAGAAGCCGCCGACTGAACCCCACGAGTCCAAGTGCAGGGAGGGAAGGGAGGCTATGAGGATCTGTTGTGCG
TGACACACCAGCAATGCAGAGCATGTTGGAATATTACTACGCCTCGCCGTTGCTGATCACGGAGCATCAGGATTCCTGCT
GGTATGTGTGGTCCTCTGTTGTCG-----TGC-CAGGGCCAGCATTGCAGCAGCAGCA---AAGCAAGCCGAGGGGTAGC
CTAC-------TGCTGGCTGATGAGCAAGGGATGGAATAAGCCAGAGAACATGTTTTGA---------------------
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>SNPs
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--------S-----------------------------------------------------------------------
--------------------------------S------------------------------S----------------
------------S-------------------------------------------------S-----------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S----------------------------------------------SSS-----
---S------------------------S---------S-----------------------S------------S--S-
----SS--------------SS-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS-----------S------------------S----------S-S--------------S
-----S--------------S------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------S--------------S----S--S--------------SS----S-----S---SSSSS-
------------------------S-----S--------------------------------------S---S------
--------------------------------------------------------------------------------
-------S------S-----SSS----SSS-----------S-S------------------------------------
-------------------------S--------------------------------------S---------------
------S-----------------------------------------------------------S-------------
--------------------------------------S-----------------------------S-----------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
----------------S---------------------------------------------------------------
-----------------------------------------------------------------S--------------
---------S--------------S-------------------------------------------------------
SS-----------SSS----------------------SS---------------S-SS--S--S---------------
-----------------------------------------------------S--------------------------
-------------------------------S------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------S-----S-----------------------------------------------
-------------------------S------------------------------------------------------
----------------------------------------------------------S---------------------
S-------------------------------------S--------------------------S-----S--------
------------------------------------------------------------------S-------------
-------------S--------------------S-------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S----S
--------------------------------------S----------S------------------------------
--------------------------------------------------------------------------------
----------------------S-----------------------------------S--S------------------
-----S--------S-------------S-SS--------------------S-S---------------SS--------
----S---------------------S---------------------------------S-------S-----------
----SSSSSSS------------------------------S-----------------SS-S--SS-SS----------
----------------------------------S----S----------------------------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS------------------S---------------------SSSSSSSS----------S--
------SSSSSSSSSSSSSSSSS--------------------S---------S--------------------------
-----------------------------------------------------------------S--S-SSSS------
-----------------S--SS------------------S----------------------------------S----
S-------S-----S--S------SS---------S---------S--SSS--SSSSSS-SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS-------------S-S-------SSSS-------S----------S-------------S----
-------------S----------S----S---------------------------------------S--S-------
---SS-------------S---S-------------S-------------SSSS--------------------------
------------SS--------------S---------------SS--S-SSSS--------------------------
----------------------------SS--------S--S-SSSSSSSSSSSS-------------------------
----S--
>forward_943
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-------------------------------------------TTGGTAAAGGATGCAGCGGT-----------------
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>reverse_3187
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------------------------------------------------------------------TGACAGGATGGTCA
GGCTCT--------------------------------------------------------------------------
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>forward_2542
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------------------------------------------GGAACTCGATGCTTGGTGGA------------------
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>reverse_3901
--------------------------------------------------------------------------------
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------------------------------------------------------------AAAGCAAGACGAGGGGTAGC
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-------
