>input_sequence_42887
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------ATGAGAGCCCAGCTCGCTCTAGCGCTT
CTTCTCTCCCTCACGGTTGCCTCCACCAGCCCCCTCGCTATCGCCGACGATCTTGACTATGATGGTGGAGTGAAGAAATC
TGATGCCGCCTCGGATGTCTCCACCAGCGCTGAGACAAAACCCGAGGCCGACTCCTATGTCCCCGCCAGCGCTGAGAAGA
AACCAGAAGCCGTCGCAGCCAGCGCCGAGAATAAACCCGAAGCTGCCTCTGATGTCTCTACCAGCGCTGAGAAGAAACCC
GAGGCCGACTCCTACATCTCTGCCAGCACCAAGAAGAAACCTGAAGCCGCCTCTAACGTCTCCGCCAGCGCTGAAAAGAA
GCACGAGGCTGCCTCCGACATCTCTGCCAACGCAAAGAAGAAACCAGAGGCTGACTCCTACGTCTCCGCTAGCGTTGAAA
AGAAATCCGAAGCCGACTCCGCCAGTGCCGAGAAGAAACCTGAAGCCGCCTCCGATGTCTCCGCCACCG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CTGAGAAGAAACCTGAGGCCGACTCCTACGTCTCTGCCAATGCTGAGAAGAAACCCGAAGCCGTCTCCGCC
AGTGCCGAGAAGGAACCCGAAGCCGCCTCTGACGTCTCCGCCAGCGCTGAGAAGGAACTTGAGGCCGCCACTGACGCCTC
TGCTGTCCCTGAGAAGAAACCTGAAGCCGTCTCTGATGTCTCCGCTAGCGCAGAGAAGAAACCCGAAGTCGTCGCCGACT
ACGCCGGTGCTAAGAAGAAACCTGATGTCGGCCCCGATAATGTTGCTGCAGAGAAGAATTCGGTAAGCTCCTCTGGATAT
GCCGGCATGGAGAAGAAACCCGAAGGTGCCACCAAGGCCGCCGGGGAGAAGAAATCCGAGATTGCCTCCAAGAAGAAATC
CAAAAAAAAGAGCGAGCTCTCCCAGCCTTCCACCACCGAGAAGAAACCGAAAGGGAAAAACGACCATGGTGCCGAGAAGA
AGTCCAAAGGCAAGAAGGACGCCTCTGGATACACTGGTGCGGAGAAGAAACAAAAAGCAAAAGTAGATTCCCCCAAGAAG
GTTGGGGTCGAGAAGAAACCGGAGATGCCAAAGAAGGAAGAGCCTAAGAAGAATGACAAGACCAAGTCGTTGGCGCCGGC
CACAACTGATGCTTACGTCGCACCGAAGGAAGAAATGAAGAAGCCAGAAGCTGCCACGCCCGATACCTACGCTGCACCAA
AGGTGGAATCAAAGAAAGAGGAGTCCAAGAAGGATAAGCTAAAGAAGGTGGAGGTCATGCCCATCACACCTGACACCTAC
ACCAAGCCAACGGAGGAGCCAAATAAGGAGGAGCCAAAGAAGGAAGAGCCGAAGGAGGAGATAGCGACCAACTCACCTGA
CACCTACACTGAGCCAAAGAAGGAGGAGCCAAAGGAGGAGCCCAAGAAGGAGGAGATCGCGGCCAGCTTACCTGACACCT
ACACCGCGGCAAAGGAGGAGCTGAAGAAGGAGGAACCAAAGAAGGAGGAGCCAAAGGTACCAGTAGCCGACACCACCGAT
AGCTATGCCGCGCCACAGAAGGCCCAACCGGAGACGTCGGTGGCTGCAACATCTAATAGCTACACCGTGTCAAAGAATGC
TCAGCCAGAGACATTGATAGCTAGCACAACCGACACCTATGCTGCGCCAAAGACTACCAAGCCGGAGACGGAGGCAGCCA
GCACAACCGACAGTTATGCTGCGCCGAAGACTTCCCAGCCAGAGACACCAGCGGCCGAAACAACTGATGCCTATGCCGCG
CCGAGACCGAGGCTGTGGAACAAGAAGATTGGCCATCTCCCCCTGCCGCAC---TAA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr4A_1_TraesCS4A01G171300
TTTAATTATGGCAGCACTGGGAAGGATGGTGCTGCGGTTGCGTTCTGTGATGCAAGGCTTCTGGCGGCGTTGCGACAAGA
GCAATGGAATGAAAAGAGTATGCTGGGTCAAGAGATCTGTGTTCTTGTCAGGAACGCGAGATCAGCGGCGTATAGACGGG
CATTTGCCACAGTTGTTCTGGAGCAGCAGAAGGAAGATCTAGAGTTTCTGTAGTCAGCAATATCCCATCTTCCATTGCGA
TGAACTTGCTGCAACCATGGCTATATAGCATGGTAATTTTGCTAGATGCATGAAAGCAATTTTTTGCAACATGTCTGAGT
TGTCAGATTTTTTCTTGAGGGGTGTTTTGA----TTT---TTTTTTAGGGTTTGAGGTGTGTC--T----TGTTTGATAA
CAAGTAATCTGATTTGCGTCTAGTGGTAACACATTGTTCGGCCCCTCCGTTTGTTATGGTCGACAGCTCGCGTCTGGGCC
CACATGTTATTGAGAAAACTGCGTCTCTCAAAAAAAGAAAAAGAAAATTGCATGCATGCTGCCTACTCTCTCCGTTCTTA
AATATTTGTCTTTCTAGACATTTTAAATGACTACTAGATACGGATGACTACTAGATACGGATGTATGTAGACATATTTTA
AAGTGTAGATTCACTCATTTTGCTCCGTACGTAGTCATTTGTTAAAATGACTAGAAAAACAAGTATTTAAAAACGGAGGG
AGTATTTTGGAAAATAGCACATTGTTCTCCTAGAAAAGATGTTAAAAAAGGATCCTTATTATTTAGCAAAACCGGAGATT
GTAAAGCTCCCGCCTTCTCTTTCGGCTCCTTTCTTCACGGCAGGCTCGTAATTTTACAGGATCAATTAGTTGGAGATTAG
TGGCTACTGTTCCAGGGAAAATGCAAGACCGGCGCCACCTCTCGTTCCCTCCCTCGCTCGCCATTCAAATACCTTCCAAC
CTCTTGCTGGCATTTCATTCCACTGCCACACCACCACTGTCCCGTTGATTGCCATGAGAGCCCAGCTCGCTCTAGCGCTT
CTTCTCTCCCTCACGGTTGCCTCCACCAGCCCCCTCGCTATCGCCGACGATCTTGACTATGATGGTGGAGTGAAGAAATC
TGATGCCGCCTCGGATGTCTCCACCAGCGCTGAGACAAAACCCGAGGCCGACTCCTATGTCCCCGCCAGCGCTGAGAAGA
AACCAGAAGCCGTCGCAGCCAGCGCCGAGAATAAACCCGAAGCTGCCTCTGATGTCTCTACCAGCGCTGAGAAGAAACCC
GAGGCCGACTCCTACATCTCTGCCAGCACCAAGAAGAAACCTGAAGCCGCCTCTAACGTCTCCGCCAGCGCTGAAAAGAA
GCACGAGGCTGCCTCCGACATCTCTGCCAACGCAAAGAAGAAACCAGAGGCTGACTCCTACGTCTCCGCTAGCGTTGAAA
AGAAATCCGAAGCCGACTCCGCCAGTGCCGAGAAGAAACCTGAAGCCGCCTCCGATGTCTCCGCCACCG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CTGAGAAGAAACCTGAGGCCGACTCCTACGTCTCTGCCAATGCTGAGAAGAAACCCGAAGCCGTCTCCGCC
AGTGCCGAGAAGGAACCCGAAGCCGCCTCTGACGTCTCCGCCAGCGCTGAGAAGGAACTTGAGGCCGCCACTGACGCCTC
TGCTGTCCCTGAGAAGAAACCTGAAGCCGTCTCTGATGTCTCCGCTAGCGCAGAGAAGAAACCCGAAGTCGTCGCCGACT
ACGCCGGTGCTAAGAAGAAACCTGATGTCGGCCCCGATAATGTTGCTGCAGAGAAGAATTCGGTAAGCTCCTCTGGATAT
GCCGGCATGGAGAAGAAACCCGAAGGTGCCACCAAGGCCGCCGGGGAGAAGAAATCCGAGATTGCCTCCAAGAAGAAATC
CAAAAAAAAGAGCGAGCTCTCCCAGCCTTCCACCACCGAGAAGAAACCGAAAGGGAAAAACGACCATGGTGCCGAGAAGA
AGTCCAAAGGCAAGAAGGACGCCTCTGGATACACTGGTGCGGAGAAGAAACAAAAAGCAAAAGTAGATTCCCCCAAGAAG
GTTGGGGTCGAGAAGAAACCGGAGATGCCAAAGAAGGAAGAGCCTAAGAAGAATGACAAGACCAAGTCGTTGGCGCCGGC
CACAACTGATGCTTACGTCGCACCGAAGGAAGAAATGAAGAAGCCAGAAGCTGCCACGCCCGATACCTACGCTGCACCAA
AGGTGGAATCAAAGAAAGAGGAGTCCAAGAAGGATAAGCTAAAGAAGGTGGAGGTCATGCCCATCACACCTGACACCTAC
ACCAAGCCAACGGAGGAGCCAAATAAGGAGGAGCCAAAGAAGGAAGAGCCGAAGGAGGAGATAGCGACCAACTCACCTGA
CACCTACACTGAGCCAAAGAAGGAGGAGCCAAAGGAGGAGCCCAAGAAGGAGGAGATCGCGGCCAGCTTACCTGACACCT
ACACCGCGGCAAAGGAGGAGCTGAAGAAGGAGGAACCAAAGAAGGAGGAGCCAAAGGTACCAGTAGCCGACACCACCGAT
AGCTATGCCGCGCCACAGAAGGCCCAACCGGAGACGTCGGTGGCTGCAACATCTAATAGCTACACCGTGTCAAAGAATGC
TCAGCCAGAGACATTGATAGCTAGCACAACCGACACCTATGCTGCGCCAAAGACTACCAAGCCGGAGACGGAGGCAGCCA
GCACAACCGACAGTTATGCTGCGCCGAAGACTTCCCAGCCAGAGACACCAGCGGCCGAAACAACTGATGCCTATGCCGCG
CCGAGACCGAGGCTGTGGAACAAGAAGATTGGCCATCTCCCCCTGCCGCAC---TAAGTCCAACAGTTTACCCAGTTTCT
GAGCGATCAACCAAAAAAAACTTCCCCTCTCATCTCACTTGAGGAGCTACTATGACTCTATGACCGG---------ATTT
-TATACCCCAATTTTCATTGTGTAACCGCTTATCCACAATGTACCACTTATGCAACTCCGTTTGCAGTGTTATTGTATTG
CTATGTAAAGAGAACTCATGTACCTGTCATGTAAACAAACA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AGTGTTATACCACTTTTTATTCTAAAAATAAAACTCATGTACCGTGCATGTATCACTTTTTATTCTAAAAAG
AGAACTCATGTAACGTGCATGTAACACCGGATTAAGAATACCCAGCTTTCGTGAATATTCAGGAGATTGTTTCATAGAGT
GTTGCAAATGCTTCACAAGAGTTCCATCATGTCACGGCTAAACATTAATCATGTATCAACTATTTAAGATCTACTGCTTG
CATATATAATTTTTTTCTCAAAATTAGCATAGAGAAAGTTAATGTCTTAATCCATCATCACAAGTTAATGTCATATAACA
CAAAGAAAGTTAAATGTTTGCATAATTCCTTGGACCATGAGAGTATCTAGTTCCTTCATGGCATCTTTTGTCCTACCCTC
CCGTGACAGCGGGGTCCTAGTAGAAACTAAGGGTAACTAAGGCGCTCCTTTTAATAGAAAACCATAACACAACATTAACA
CATAGTGAATACATGAACTCCTCAAGTTAGAGTCATCCCCATGGAGTATCCCAATTATTGTCACCTTGGGGTATATGGTT
CAGAACAATAACATATGCATACAAATTGCAGATATGATCAAGAACACAAATATATACATGAAAACATAATATGTTCAGAT
TTGAAATCATGGCACTCGGGCCCTAGTGACAAGCAATAAGAATAGCAATGTCATATCAACATCAACCCCAGAACATAGTG
AATAATAGGGATCAAGCCTTAACAAATTTGACATGGTTACATATGAAATTCCATCCAAATCCCATCAACCTCCA
>chr4D_1
TTTAATTATGGCAGCACTGGGAAGGATGGTGCTGCGGTTGCGTTCTGTGATGCAAGGCTTCTGGCGGCGTTGCGGCAAGA
GCAATGGAATGAAAAGAGTATGCTGGGTCAAGAGATCTGTGTTCTTGTCAGGAACGCGAGATCAGCGGCGTATAGACGGG
CACTTGCCACAGTTGTTCTGGAGCAGCAGAAGGAAGATCTAGAGTTTCTGTAGTCAGCAATATCCCATCTTCCATTGCGA
TGAACTTGCTGCAACCATGGCTATATAGCATGGTAATTTTGCTAGATGCATGAAAGCAAATTTTTGCAACATGTCTGAGT
TGTCAGATTTTTTCTTGAGGGGTGTTCGAGTTTTTTTTTCTCTTTGAGGGTTTGAGGTGTGTAAGT----TGTTTGATAA
CAAGTAATCTGATTTGCGTCTAGTGGTAACACATTGTTTGGCCCCTCCGTGTGTTATGGTCGACAGCTCGGGTCTGGGCC
CACATGTTATTGAGAAAACTGCGTCTCTCAAAAAATGAAAAAGAAAATTGCATGCATGCTGCCTA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TTTAGGAAAACAGCACATTGTTCTCCCAGAAAAGATGTTAAAAAAGGATCCTTATTATTTAGCAAAACCGGAGATT
GTAAAGCTCCCGCCTTCTCTTTCGGCTCCTTTCTTCACGGCAGGCTCGTAATTTTACAGGATCAATCAGTT-GAGATTAG
CGGCTACTGTTCCAGGGAAAATGCAAGACCGGCGCCACCTCTCGTTCCCTCCCTCGCTCGCCATTCAAATACCTTCCAAC
CTCTTGCTGACATTTCATCCCACCGCCACACCACCACTGTCCGGTTGATTGCCATGAGAGCCCAGCTCGCTCTAGCGCTT
CTTCTCTCCCTCGCGGTTACCTCCACCAGCCCCCTCGCTGTCGCCGACGATCTTGACTATGGTGGTGGAGTGAAGAAATC
TGATGCCGCCTCGGACGTCTCCGCCAGTGCCGAGACGAAACCCGAGGCCGACTCCTACGTCCCCGCCAGCGTTGAGAAGA
AACCCGAAGCCGTCGCAGCC------CAGAATAAACCCGAAGCTGCCTCTGATGTCTCTACCAGCGCTGAGAAGAAACCC
GAGGCCGACTCCTACGTCTCCGCCAGCACCGAGAAGAAACCTGAAGCCGCCTCTGACGTCTCCGCCAGCGCCGAAAAGAA
ACCCGAGGCTGCCTCCGACGTCTCTGCCAATGCAGAGAGGAAACCAGAGGCTGACTCCTACGTCTCCGCTAGCGCTGAAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NN------------------------------------------------------------------------------
-------------------------------------------------GACGTCTCCGCCAACATCGAGAAGAAAACCG
AAGCCGCCCCCGAGAAGAAACCTGAGGCAGAATCCTATGTCTCTGCCAACGCT---------------------------
------GAGAAGAAACCCGAAGCCGCCTCTGACGTCTCTGCCAGCGCTGAGAAGAAACCTGAGGTCGCCACTGACGCCTC
TGCTAGCCCTGAGAAGAAACCTGAAGCCGTCTCCGACGTTTCCTCTAGCATGGAGAAGAAACCCGAAGTCGTCGCCGACT
ACGCCGGTGCTAAGAAGAAACCTGATGTCGCCCGCGACAATGTTGTTGTAGAGAAGAATCCGGTAAGCTCCTCTGGCTAT
GCCGACATGGAGAAGAAACCTGAAGGTGCCACCAAGGCCGCCGGGAAGAAGAAATCCGAGGTTGCCTCCGAGAAGAAATC
CAAAAAAAAGAGCGAGCCCTCCCAATCTTCCACAACCGAGAAGAAACCCAAAGGGAAAAACGACCATGGTACCGAGAAGA
AGTCGAAAGGCAAGAAGGACGCCTCTGGATACACCGGTGCAGAGAAGAAACGAAAAGCAAAAGTAGATTCCCCCAAGAAG
GCTGGGGCCAAGAAGAAACCAGAGATGCTAAAGAAGGAAGAGCCTAAGAAGAATGACAAGCCCAAGTCGTCGGCGCCGGC
CACAACTGATACTTACGTCGCACCGAAGGAAGAGATGAAGAAGCCAGAAGCTGCCACGCCCGATACCTACACCGCACCAA
AGGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------GGAACCAAAGAAGGAGGAGCCAAAGGTACCAGCAGCCGACACCACCGAT
AGATATGCCGCGCCAAAGAAGGCCCAACCGGAGACGTCGGCGGCTCCAACATCTGATAGCTACACCGTGTCGAAGAATGC
TCAGCCGGAGACACCGGTAGCTAGCACAACCGACAACTATGCTGCGCCAAAGACTGCCAAGCCGGAGACGGAGGCGGCCA
GCACAACCGACAGTTATGCTGCGCCGAAGACTTCCCAGCCAGAGACACCAGCGGCCGAAACAACCGATGCCTATGCTGCG
CCGAGACCGAGGCCGTGGAACAAGAAGATTGGCCATTTGCCCCCGCCGCACGTGTAAGTTCAACAGTTTACCTAGTTTCT
GAGCGATCAAACAAAAG-AACTTCCCCTCTCATCTCACTTGGGGAGCTACTATGACCGGAAAACCGGCCCACACTCATTT
-TATACCCCAATTTTCATTGTGTAACCGCTTACCCACAATGTACCACTTATGCAACTCTGTTTCCAGTTATTGTACTGT-
-TATGTAAAGAGAACTCATGTACCTGTCATGTAAACAAACGG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GTGTTATACCACTTTTTATTTTAAAAATAAAACTCATGTACCGTGCATGTATCACTTTTTATTCTAAAAAG
AAAACTCATGTAACGTGCATGTAACACCGGATTAAGAATATCCAGCTTTCGTGAATATTTAGGAGATTGTTTCACAGAGT
GCTGCAAATGCTTCACAGGAGTTCCATCATGTCACGGCTAAACATTCATCACGTATCAACTATTTAAGATCTACTGCTCG
CATATATAATTTTGTTCTCAAAATTAGCATAGAGAAAGTTAATGTCTTAATCCATCCTCACAAGTTAATGTCTTATAACA
CAAAGAAAGTTAAATGTTTGCATAATTCCTTGGACCATGAGAGTATCTAGTTCCTTCAT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr4B_1
TTTAATTATGGCAGCACTGGGAAGGATGGTGCCGCGGTTGCGTTCTGTGATGCAAGGCTTCTGGCGGCGTTGCGACAAGA
GCAATGGAATGAAAAGAGTATGCTGGGTCAAGAGATCTGTGTTCTTGTCAGGAACGTGAGATCAGCGGCGTATAGACGGG
CACTTGCTACAGTTGTTCTGGAGCAGCAGAAGGAAGATCTAGAGTTTCTGTAGTCAGCAATATCCCATCTTCCATTGCGA
TGAACTTGCTGCAACCATGGCTATATAGCATGGTACTTTTGCTAGATGCATGAAAGCAATTTTTTGCAACATGTCTGAGT
TGTCAGATTTTTTCTTCAGGGGTGTTTGAGTTTTTTT---TCTTTGAGGGTTTGAGGTGTGTC--TAAGTTGTTTGATAA
CAA-TAATCTGATTTGCGTCTAGTGGTAACACATTGTTTGGCCCCTCCGTGTGTTATGGTCGACAGCTCGGGACTGGGCC
CACATGTTATTGAGAAAACTGCGTCTCTCAAAAAATGAAAAAGAAAATTGCATGCATGCTGCCTA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TTTAGGAAAACAGCACATTGTTCTCCCAGAAAAGATGTTAAAAAAGGATCCTTATTATTTACCAAAACCGGAGATT
GTAAAGCTCCCGCCTTCTCTTTCGGCTCCTTTCTTCACGGCAGGCTCGTAATTTTACAGGATCAATCAGTTGGAGATTAG
CGGCTACTGTTCCAGGGAAAATGCAAGACCGGCGCCACCTCTCGTTCCCTCCCTCGCTCGCCATTCAAATACCTTCCAAC
CTCTTGCTGACATTTCATTCCACCGCCACACCACCACTGTCCGGTTGATTGCCATGAGAGCCCAGCTCACTCTAGCGCTT
CTTCTCTCCCTCGCGGTTGCCTCCACCAGCCCCCTCGCTGTCGCCGACGATCTTGACTATGGTGGTGGAGTGAAGAAATC
TGATGCCGCCTCGGACGTCTCCGCCAGTGCCGAGACGAAACCCGAGGCTGACTCCTACGTCCCCGCCAACGCTGAGAAGA
AACCCGAAGCCGTCGCAGCCAGCACCCAGAATAAACCCGAAGTTGCCTCTGATGTCTCTACCAGCGCTGAGAAGAAACCC
GAGGCTGACTCCTACGTCTCCGCCAGCACCGAGAAGAAACCTGAAGCCGCCTCTGACGTCTCCGCCAGCGCCGAAAAGAA
ACCCGAGGCTGCCTCCGACGTCTCTGCCAATGCAGAGAAGAAACCAGAGGATGACTCCTACGTCTCCACTAGCTCTGAAC
AGAAACCTGAAGCCGTCTCCGCCAGCGCCGAGAAGAAACCTGAAGCCGCCTCCGATGTCTCCACCAGCGCTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCCGACGTCTCTGCCAGCGTCGATAAGAAACCCGAAGCCGCTCCTAAGAAGAAACCCGAGGC
CGACTCCTACGTCTCCGCCAGTGCTGAGAAGAAACCTGAAGCCAACTCTGACGTCTCCGCCAACATCGAGAAGAAAACCG
AAGCCGCCCCTGAGAAGAAACCCGAGGCCGACTCCTACGTATCTACCAACGTT---------------------------
------GAGAAGAAATCCGAAGCTGCCTCTGACGTCTCTGCCAGCGCTGAGAAGAAACCCGAGGTCGCCACTGACGCCTC
TGCTATCCCTGAGAAGAAACCTGAAGCCGTCTCCGACGTCTCCGCTAGCATGGAGAAGAAACCCGAAGTCGTCGCCGACT
ACGCCGGTGCTAAGAAGAAACCTGATGTCGCCCCCGACAATGTTGTTGTAGAGAAGAATCCGGTAAACTCCTCTGGCTAT
GCCGGCATGGAGAAGAACCCTGAAGGTGCCACCAAGGCCGCCGGGAAGAAGAAATCTGAGGTTGCCTCAGAGAAGAAATC
CAAAAAAAAGAGCGAGCCCTCCCAGCCTTCCACAACTGAGAAGAAACCCAAAGGGAAAAACGACCATGGTACCGAGAAGA
AGTCCAAAGGCAAGAAGGACGCCTCTGGATACACAGGTGCGGAGAAGAAACGAAAAGCAAAAGTAGATTCGCCCAAGAAG
GCTGGGGCCAAGAAGAAACCAGAGATGCTAAAGAAGGAAGAGCCTAAGAAGAATGACAAGCCCAAGTCGTCAGCGCCGGC
CACAACTGATGCTTACGTCGCACCGAAGGAAGAGACGAAGAAGCCAGAAGCTGCCACGCCCGATACCTACACCGCACCAA
AGGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------GGAACCAAAGAAGGAGGAGCCAAAGGTACCAGCAGCCGACACCACCGAT
AGATATGCCAAACCAAAGAAGGCCCAACCGGAGACGTCGGCGGCTGCAACATCTGATAGCTACACCGTGTTGAAGAATGC
TCAGCCAGAGACACCGGTAGCTAGCACAACTGACAACTATGATGTGCCAAAGACTGCCAAGCCGGAGACGGAGGCGGCCA
GCACAACCGATAGTTATGCTGCGCCGAAGACTTCCCAGCCAGAGACACCAGCGGCCGAAACAACCGATGCTTATGCTGCG
CCGAGACCGAGGCCGTGGAACAAGAAGATTGGCCATTTACCCCCGCCGCACATGTAAGTTCAACAATTTACCCAGTTTCT
GAGCGATCAAACAAAAC-AACTTCCCCTCTCATCTCACTTGGGGAGCTACTATGACCGGAAAACTGGCCCACACTCATTT
TTATACCCCAATTTTCATTGTGTAACCACTTACCCACAATGTACCACTTATGCAACTCTGTTTGCAATTATTGTATTGT-
-TATGTAAAGAGAACTCATGTACCTGTCATGTAAACAAACCGGTGTTTGATAACCCACAAGTATAGGGGATTGCAACAGT
TTTCGAGGGTAGAGTATTCAACCCAAATTTATTGATTCGACACAAGGGGAGCCAAAGAATATTCTCAAGTATTAGCAGTT
GAGTTGTCAATTCAACCACACCTGGAAAACTTAATACCTGCAGCAAATTATTTGGTAGCAAAGTAGTATGGAAGTAACGG
TAATAGTGGCAAAAGTAACAGTAGCAGTTTTGTAGTAATTGTAACAATGGCAATGGTAAAGTAACTAAGCAAAGATCAAT
ATGTGAAAAGCCCGTAGGCATTGGATCAGTGATGGATAATTATGTCGGATGCGATTCCTCATGCAACAGTTATAACATAG
GATGGCACAGAACTAACTCCAGTTCATCAATGTAATGTAGGCATGTATTCCGAATATAGTCATACGTGCTTATGGAAAAG
AACTTGCATGACATCTTTTGTCCTACCCTCCCGTGGCAAAGGGGTCCTATTGGAAACTAAGGGATATTAAGGCCTCCTTT
TAACAGAGTACCGGACCAAAGCATTAACACTTAGTGAATACATGAACTCCTCAAACTACGGTCATCACCGGGAGTGGTCC
CGATTATTGTCACTTTGGGGTTACCGGATCATAACACATAGTAGGTGACTATTGACTTGCAAGATAGGATCAAGAACTCA
CATATATTCATGAAAACATAATAGGTTCAGATCTGAAATCTGGCACTCGGGCCCTAGTGACAAGCATTAAGCATAGCAAA
GTCATAGCAACATCAATCTCAGAACATAATGGATACTAGGGATCAAACCCTAACAAAACTAACTCAATTACATGACAAAT
CTCATCCAACCCATCACCGTCCAGCAAGCCTACGATGAAATTACTCATGTACGGCGGTGAGCATCATGAAATTGGTGATG
GAGGAAGGTTGATGATGATGACGGCAACGGATTCCCCTCTCTGGAGTCCCGAACGGACTCCAGATCAGCCCTCTCGAGAG
AGATTAGGGCTTGGCGGCGGCTCTGTATCGTAAAACGTGATGAATCCTTCTCTCTGGTTTTTCTCTCCCCGAACGTGAAT
ATATAGAGTTGGAGTTGAGGTCGGTGGAGCCTCAGGGGCCCACGAGGCAGGGGGCGCGCCCCAGGGGGGTGGGCGCGCCC
TCCACCCTCGTAGATAGGGTGTGGTCCCCTGGTGTTTATTCTTTCGCCAGTATTTTTTATTTATTCCAAAAATATTCTCC
CTGAAGTTTCAGGTCATTCCGAGAACTTCTATTTCTGGACAAAAATAACACCATGGCAATTCTGCTGAAAACAGCGTCAG
TCCGGGTTAGTTCCATTCAAATCATGCAAGTTAGAGTCCAAAACAAGGGCAAAAGTGTTTGGAAAAGTAGATACGTTGGA
GACGTATCAGTGTTATACCACTTTTTCTT-------------------------------------------CTAAAAAG
AAAACTCATGTAACGTGCATGTAACACCGGATTAAGAATATCCAACTTTCATGAATATTTAGGAGATTGTTT--CAGAGT
GTTGCAAATGCTTCACATGAGTTCCATCATGTCACGGCTAAACATTCATCACGTATCAACTATTTAAGATCTAC---TCG
CATATATAATTTTGTTCTCAAAATTAGCATAGAGAAAGTTAATGCCTTAATCCATCAACACAA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------SSS-----------S---S----------------------------------
--------------------------------------S-----------S-------------------S---------
-----------------------------------S-----------------------------SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS---S------S---------------S-------------------------------------------------
------------------------------------------------------------------S-------------
S-------------------------------------------------------------------------------
---------S-------------S------------------S-------------------------------------
------------S--------------------------S---------------------S------------------
---------------S------S----S--S-----S--------------------S----------------------
----S------------------S--S-----------------------------------------------------
---------------S----S---------S-----------------------S----------------S--------
S-S----------------S----------S---S---------------------------------------S----S
-----S-S-------S---------S------------------------------------S---S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS------S-------------------------S---------------S---S-----S---------------
----S----------------------------S--S------------SSS----------------------------
------------------------------S------S-------S--S----------S----------------S---
--------------------S------------------------S--------------S--------S----------
-----------------S---------------S--------------S---------------------S---------
----------------------------------S----------------S----------------------------
-S-----S-S----------S-------S-------------------------------S---------S---------
---------------------------------S------------------------------------S-S-------
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------S----------------
--S------------S------------------------S-------------S----------------S--------
-------------SS-S------------------S-------------------S-------------------S----
----------------------------------------------------------------S-----------S---
-------------S----------------------S-S----S---------------S--------------------
----------S-----SS-----------------------S--------------SSS-SS------------------
--------------------------------S-------------------------S---------SS-SS-S-SS-S
S---------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
-S--------------------------------------S------------------S--------------S-----
-----------------S----------------------------S----S--------------------------S-
-------------S----------------------------------------------------------S-------
-----------------------------------------------------------SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_554
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------CATGCTGCCTACTCTCTCCG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_2482
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TTGGGGTCGAGAAGAAACCG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>forward_2435
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------AGGACGCCTCTGGATACACT---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_5538
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GGGCCCTAGTGACAAGCAAT-------------------------------------------
--------------------------------------------------------------------------
