>input_sequence_42881
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-------------------------------------------ATGGCGGAGACGGCGCCGGCGACGCCGCTGGACATCC
ACGAGATCCCCTTCGCCGACCTCCTCCTCCTCCTGCTCTCGCCGGAAGCGGCAGCAGCGGGCGACG---------CCGAT
GGCCGGCGGCGCCGCCTCCTGGCCACCGTCTGGGCCGCGCTCGGCCCGGGCGGCGCCGGCCTGCTGGCCGTCTCCGGTGT
CCCGCGCGCCGCCGCCCTCCGCCGCCGGCTCCTCCCCCTGGCCCGCCGCCTCGCCCTCATGGATAACCCTTCCCGCGCCC
GCCTCCTCAAGGTGACGAACCCCTCCCTCTGTAGTCTCATCTCCCTCCTCCTCCTGCC-------------CCCAAACTG
CGATTGCAGTGCGGCGGCCGTGGATTGATAGCGAT--------------------TTCCATTGCAGAAGCACGGATTGGG
CAGCGACGTTCCCCTCAAGAAGCCCGACAGGTCCGTCTCCTCCTTCGCGCAGCTCCTAAGGCATGACCATGATTCAGGCA
AGCTCCACTCCCCGGAGTCGACCACTGAAACCACCGGAGGCATGGAGGTAATCGCC------------------------
GGTGTCGACGGATTTGGGGAGAACAAGGGTGGTGATGATGGTG------------------------ATGATATTGAGAA
CCTTGGTGAGCTTTTCAAGGAGCTGGGTCTGTGCATGATGGAGCTTGGCATCTTGGTTGCCCGGGCCTGCGACATTGTTA
TCGGTGGCAATCAGCTGGAGCAGAGCATTACCGACTTTGGGAGCGCAAAGGCGAGGCTCATCCATTACCACTCCGAGTTG
GATAGCAGGATTATCAAGGAGAGGAGCAGCACAAAGAGGAAAAGCTTGGTAAATAATGCAGCAGCAGCAGCAGCAAGACC
TGTATCAGATCACATGGATACAGGTCAAATGCCAGGATCAGAAGATGGATCCTGTCTC---------------AAATCAG
CAGAAGAAAATAGTTT---------------------------------TATTTCTCTTGTGAACTTATGGCAAGAGTGG
CACTACGACTACGGAGTGCTGACAGTCTTAACGGCGCCACTATTCTTGCGCTCTGCTCTCGGACAGGAATGCCCGGTCAG
CGAAGAATGCTCTCTTCCTGATGGGCACTCACACCTGCAGCTCTTCGATAAAAGGAGGATATTCTCGGTGAGATGCTCCC
AGGAGAGCTTCATTGTTCAGGTTGGGGAGGCAGCAGGCATCCTGTCAAGGGGGAAGCTGAGATCTACGCTTCATGCTGTC
AGTAGACCTTTAGGCTTGCCAAACATAAGCCGGGAGACTTTCGTAGTCTTCCTACAGCCGTCTTGGGACAAAACTCTGCC
TTTCTCGGGTTACTCTTCTGCCGATGAAGAAGATGGTTCAAGTGATCACATGGA---------------------ATCAG
CCGGGTCTTGTGGTGAACATACATTGATGCAAGAAATTCTGAAGAAAATCCCCCCGCTGTCGTCAAGGCTGAAAGAAGGC
ATGACGTTTGCAGAGTTTTCTAGGCAGACAACGAAACGGTATTATGGTGGTGGAGGCATCCAACAGAACAGTTAACCAAG
AAGAAGCATGGCGATGGAAATGCATCTCATACAAACCGTAATGAAGTACTGAGTTCTACACCCTGTATGTTGAGAATCCA
CTCTGTAATTACTCCATGTCACAGTATGC---------------------------------------------------
--------------------------------ACTTTTTTATCTTTGTTGATGGCTTATTTTCTTCTGCAGTTGTGAAGT
CACGGAGTTTTTAACAAGTACTTATATTTCGACCTCAAAATCGCTGGCTTCCAAAATTTGTTGGTCCGGTAGTTTAAAGT
TATAACTTCATTAAAACGAGCATTGCCCCTGTCCTTGTGTTGGTAAGTTTAGCTTCCTAAACTGATATTGATTATAGGGA
TCGCATCAACACAGGAGACCTCTCCA------------------------------------------------------
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-----------------------------
>chr1B_1_TraesCS1B01G040700
TTTTATACTCTTGTTCTGTTTTTGACTGATGGGCTCAT----GGTCTTTCTTCTG----TCATTCCTAAGATTTTTGTAG
GGTTCGATCTATCTAT----TTTTGTTTGTTTGTGTTATGTGTTCCTGCGTCAACGGCACGCCATAGTCCGATGAGCGAC
GGGGCCAAGGGAAAG-----------------------------------------------------------------
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------------------------------------------------TTTTGTGCAAACTGTGACAAATGTTCTCGGTG
CTTGGAA-ATTTTCATGCTGAAATAACATTTGTGAAAGTCGTGGTAAAAGAAAAT--------CGACACTCCCAAAATGT
TATTCTCGAAAG-----------------------------ACTTCCACGAATGTTATTTTGAGATTAAAATTTGCAAGC
ACTAACAAAATATGTCAAAAGTTTGCACCAAAAATTTCAGAATTTTTTTAATTGTCTACATTTTTTTTTGGAATTTATTG
TTCATCCTGAGCTCAAATGAGCTCGGGAGTAGAAGGCGACTTTTTGTTAAGAGCGATATATTACTCCTATAAAGAATGTT
TGAGTACCCGTCTCCTGAGAGCTTTCGCGGTCGAGAGTGCCCTCCACGCCATCCATTGCACGGTGGCGCGCACCTGGGCG
ACGTCCCTCGGGTGTCCATGACAGATAGACCACGGGTGCGGCCGGGGCCATCGTCATGTGGTAACTTCGGCCGCGCTGAT
GTGCGCCGTCCTGTCCATTGGCCCACGCAGGAGAAACAGGTCGGACCCACATGTCGGCATCTTGGTCTC-GTGTTGATTT
TTAAGTTGAGACAGATGACATTTACGAAAACGTTTT--------------------------------------------
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-------------------------------------------------------------------------------T
GCTGGCAATTTCTTCAGATTCACATGCCATTTTTTTCTAATTCGCATGGAAGACTTAGAAAAAAAACTACCACAGGTTTC
ATCTCATGTTGCAACTAAAACTGCGAAGACATGTTCATTGGCCACCCTTTCCAGCGAACGTTCGCCAGATAATAATCCTG
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----------------------------------TAAATTTAAACAAAGACTGAAAAAAGTCAAGGAAAGAGCAACACGC
TGGGCCACCCTGGACTGGAAGGTTCCGGGCTCGACCC--CACCATGGCGGAGACGGCGCCGGCGACGCCGCTGGACATCC
ACGAGATCCCCTTCGCCGACCTCCTCCTCCTCCTGCTCTCGCCGGAAGCGGCAGCAGCGGGCGACG---------CCGAT
GGCCGGCGGCGCCGCCTCCTGGCCACCGTCTGGGCCGCGCTCGGCCCGGGCGGCGCCGGCCTGCTGGCCGTCTCCGGTGT
CCCGCGCGCCGCCGCCCTCCGCCGCCGGCTCCTCCCCCTGGCCCGCCGCCTCGCCCTCATGGATAACCCTTCCCGCGCCC
GCCTCCTCAAGGTGACGAACCCCTCCCTCTGTAGTCTCATCTCCCTCCTCCTCCTGCC-------------CCCAAACTG
CGATTGCAGTGCGGCGGCCGTGGATTGATAGCGAT--------------------TTCCATTGCAGAAGCACGGATTGGG
CAGCGACGTTCCCCTCAAGAAGCCCGACAGGTCCGTCTCCTCCTTCGCGCAGCTCCTAAGGCATGACCATGATTCAGGCA
AGCTCCACTCCCCGGAGTCGACCACTGAAACCACCGGAGGCATGGAGGTAATCGCC------------------------
GGTGTCGACGGATTTGGGGAGAACAAGGGTGGTGATGATGGTG------------------------ATGATATTGAGAA
CCTTGGTGAGCTTTTCAAGGAGCTGGGTCTGTGCATGATGGAGCTTGGCATCTTGGTTGCCCGGGCCTGCGACATTGTTA
TCGGTGGCAATCAGCTGGAGCAGAGCATTACCGACTTTGGGAGCGCAAAGGCGAGGCTCATCCATTACCACTCCGAGTTG
GATAGCAGGATTATCAAGGAGAGGAGCAGCACAAAGAGGAAAAGCTTGGTAAATAATGCAGCAGCAGCAGCAGCAAGACC
TGTATCAGATCACATGGATACAGGTCAAATGCCAGGATCAGAAGATGGATCCTGTCTC---------------AAATCAG
CAGAAGAAAATAGTTT---------------------------------TATTTCTCTTGTGAACTTATGGCAAGAGTGG
CACTACGACTACGGAGTGCTGACAGTCTTAACGGCGCCACTATTCTTGCGCTCTGCTCTCGGACAGGAATGCCCGGTCAG
CGAAGAATGCTCTCTTCCTGATGGGCACTCACACCTGCAGCTCTTCGATAAAAGGAGGATATTCTCGGTGAGATGCTCCC
AGGAGAGCTTCATTGTTCAGGTTGGGGAGGCAGCAGGCATCCTGTCAAGGGGGAAGCTGAGATCTACGCTTCATGCTGTC
AGTAGACCTTTAGGCTTGCCAAACATAAGCCGGGAGACTTTCGTAGTCTTCCTACAGCCGTCTTGGGACAAAACTCTGCC
TTTCTCGGGTTACTCTTCTGCCGATGAAGAAGATGGTTCAAGTGATCACATGGA---------------------ATCAG
CCGGGTCTTGTGGTGAACATACATTGATGCAAGAAATTCTGAAGAAAATCCCCCCGCTGTCGTCAAGGCTGAAAGAAGGC
ATGACGTTTGCAGAGTTTTCTAGGCAGACAACGAAACGGTATTATGGTGGTGGAGGCATCCAACAGAACAGTTAACCAAG
AAGAAGCATGGCGATGGAAATGCATCTCATACAAACCGTAATGAAGTACTGAGTTCTACACCCTGTATGTTGAGAATCCA
CTCTGTAATTACTCCATGTCACAGTATGC---------------------------------------------------
--------------------------------ACTTTTTTATCTTTGTTGATGGCTTATTTTCTTCTGCAGTTGTGAAGT
CACGGAGTTTTTAACAAGTACTTATATTTCGACCTCAAAATCGCTGGCTTCCAAAATTTGTTGGTCCGGTAGTTTAAAGT
TATAACTTCATTAAAACGAGCATTGCCCCTGTCCTTGTGTTGGTAAGTTTAGCTTCCTAAACTGATATTGATTATAGGGA
TCGCATCAACACAGGAGACCTCTCCAGTTATGATTGGCAATTAGTCAACACAATGCTCACTAGCTCAGTTGTAAAAAATG
TTAACTGTTTCAAAACTATTGTTGTGCTCCACATTCTCACTTTCTCTTTTTTCACTCCAAGACTGTTGGGTTCCTAGTGT
TGCATCAGATCAGCTTAGTTCAACCAGAAGACACGCTTGAATTTGAAGCCTTCTTAATTTTATTCCAGATCTAAGGTGTT
AAATTATGGTATGATCCATATACAGTAGCAGGAAACCATGTGCCTCTCTGGTTCCTTGGTAATTTTAGCTTCCTATACTG
ATATTGATGGTAGAGATCTCACGTCGACAGAGGAAATCTGTCCAGCAATGGTTGGCAATTAGTCAACAC-ATGCCCAGCT
GGAAAAGAAGTTAAATGTTTGAAAAATATTATTGACATTCTACACTTTGCAGTATCTCCTTTTCTTTCTAAGACTGTAGA
GATCCGAATGGTGGGTTTGAACTCGAAGTCTACCTAATTTTGTTCCAGATCAGAGGTGTTAAAAGTAGGGTA--------
-----------GGAAAACCCTTCTCTGCTGTGCATGCTGGATAATAGTTTTCCACTGTGAATCATTCAACTCCACTGTAC
ATGACTTGAATATTCTCGTGCCACATTGGTGCGGTATACAGTAG----------------------TGATCTATCTTGTT
TTCCTCTGTTTTTTGTGAGCGAGGGTGATCTACATCTCTTGTAAAGTGCAGACCTCGATTCATTGTCACCGCGATTTCCT
GCTGAATTATACCTTTTAACTCCTTTAAGTCAAACCATATGAGTATGTTTCATCAAAAGATGAATATGTGGTATCTCTGC
CTATTGATGAATACCTTGTCCTTGCTGTTGAAGTAGTTGTCAGATTGG-TGATAGCTTGGAATCTATTGTTTGTTCCTAA
CAAAGTAACAGGAAAAACGGGGCGCTGAAAGTGTAGCACTGCTCATGGTTAAACTTATTATGTTAAGTTGTTAACGGGTC
GTTTTGTGTAAATGATGTTTATTGGTTCT
>chr1A_1
TTTTATACTCCTATTCTGATCTTGGCTGATGGGCTGATCGATGGTCTTTCTTCTGTCACTCATTCCTAAGATTTTTGTAG
GGTTCGATCTATCTAT----TTTCGTTTGTTTGTGTTG-GTGTTCCTGTTTCCGTT--GCGCCCCTGGATTTCGCT--TA
ACTTGTTATTGGTCCATGGTATA--CAGCGGCATTAGCTCAAAGAAGCAACAAACCATCTCAAGTCAGCAAGATTTTGGT
TTAGCAAAAAATATGTTTTTAGTCCCTTAATGCACAAAGT-GTGTGTTTGGGTCTTTTTTGTCAACATTTTATCCCTCCT
GCTTGGCACGATTCATCCAAAACCATATCGAGCAAGGACGCGGAGTATTAGTCCCGAGCTCATATGCTCAGTAACAAACA
GTAAAATAAAAATAAATAGTAAAACCATTAAAAACTGAATATATCTTTTTGTGTGCAAATTGTGACAAATGTTCTCGGTG
CTTGAAATATTTTCATCTCGAAATAACATTTGTGAAAGTCGTGGTAA---AAAAC--------CGACACTCCCAAAATGC
TATTCTCGAAAGCATTTTAGAGTGTTGTTTCTTTTTTCATGACTTCCAAGAATGTTATTTTGAGATGAAAATTAGCAAGC
ACTAAGAAAAATTCTC-AAAGTTTGCACC----------AAATTTTTTTACTTCGTTTTCAA-TTTTCGGATTTACTA--
TTCATCCCGAGCTCATTTGAACTCGGGAGTAGAAGGGGACTTTCATATC-GAGCGATATATTAGTCCAACAAATAATGTT
GGAGTACCCGCCTCGTGCGAGCTTTCACGGGCGTGAGTGCCCTCCACGCCGTCCGTTGCACGGTGGTGCACACTTGGGCG
ACGTCCCTCGGGGGTCCATGACGGATGGACCGCGGGTGCGGCCAGGGCAATCGTCATGTGGTAACTTCGGCTGCGCCGAC
GTATGTCGTCCTGTCATCTGACCCACGCACGAGAGACGGGTCAGACCCGCCTGTCGGCATCTTCGTCTC-GTGTTCTGCT
AGTTCAATCACAACAGGCGGGGTGTGTGTCGCGCCAGCCGGCCAGTGCGAGAGACTGGCTCAGCGAGGAGGCCCGAGGCC
CTCCGCGTTGTTCGTTTCACGCTGTCCCTTAATTTTGCACATAGTATGTGTATGGGTCTTTTTTGTCAACATTTTATCCC
TCCTGCTCGGCACGATTCATCCAAAACCAGGAGGACGACACGGGGTTTGTTGCGGCGTTCTTTAGATGGGAGT-------
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---------------------ATGAGCTGGGGAGTAGAAGGCGACTTTTCATATCAAGCAATATATTACTCCTATAAAGA
ATATTGGAGTACCCTCCTCCTAAGAGCTTTTTCGGGAGAGAGTGCCCTCCACGCCGTCCATTCCATGGTGGCGCGCACCT
GGGCGACGTCCCTCGGGGGTCCATGACGGATGGACCGCGGGTGCGGCTGGGGCTATCATCATGTGGTTGAAGAAAGTATG
CCCTAGAGGCAATAATAAAGTTGTTATTTATATTTCCTTATATCATGATAAATGTTTGTTATTCATCCTAGTATTGTATT
AACCGGAAACTTAGTACATGTGTGAATACATAGACAAAACAGAGTGTCCCTAGCATGCCTCTACTTGACTAGCTCGTTAA
TCAAAGATGGTTAAGTTTCCTGACCATAGACATTGTATTAACCGGTGGTTATTTGATGAACGAGATCACATCATTAGGAG
AATGATGTGATGGACAAGACGCATCCGTTAGCTTAGCATAATGATCGTTTAGTTTTATTGCTATTGCTTTCTTCATGACT
TATACATGTTCCTCTGACTATAAGATTATGCAACTCCCGAATACCAAAGGAACACCTTGTGTGCCAACAAACGTCACAAC
GTAACTGGGTGATTATAAATATGCTCTACAGGTGTCTCCGATGGTGTTTGTTGAGTTGGCATAAATCAAGATTAGGATTT
GTTACTCCGAGTATCGGAGAGGTATCTCTGAGCCCTCTCGGTAATGCACATCACTATGAGTCTTGCAAGCAATGTGACTA
ATGAGTTAGTTAGGGGATGACGCATTACGGAACGAGTAAAGAGACTTGCTGGTGATGATATTGAACTAGGTATGATGATA
CCGACGATCGAATCTCGGACAAGTAACATACCGATGACAAAGGGAATAATGTATGTTGTTATGCGGTTTTGACCGATAAA
GATCTTCGTAGAATATGTAGGAACCAATATGAGTATCCATGTTCCGCTATTGGTTATTGACCGGAGATGTGTCTCAGTCA
TGTCTACATAGTTCCCGAAACCGCATGGTCCGCACGCTTAACGTTCGATGACGATTTGTATTATGAGTTATGTGATTTGA
TGTACCAAAGTTTGTTCGGAGTCCCGGATGAGATCACAGACATGACGAGGAGTCTCGAAATGGTCAAAACATAAAGTTTG
ATATATTGAAAGGTTATGTTTGGACACCAAAATGATTTCGGATAGGTTCGGACATTTTTCCGGAGTACCGGGGGTTACCG
AAACCCCGGGGGGTTAATGGGCCTTCATGGGCCCTGGTGGAAGAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNATTTGTCATATCTAAAACTTTGACGATAGCAGGATATTTGAGTCCCTAAAATTATGGTCAAAGTTCGACCCATAGTA
CAAGAGGCTTATAGAATGTTCCTAAACAAATGATGCGCATATATAAGTTTTTTTTTGAATCATTTATACGCGGTTTCAAA
AGATTCCTTCCTTGGAAGGAACTTGATTGATTTTTAAATTTAAACAAAGACTCAAAAAAGTCAAAGA----GCAACACGC
TGGGCCACCCTGGACTGGAAGGTTCCGGGCTCGAGCCCACACCATGGCGGAGACGGTGCCGGCGACGGCGCTGGACATCG
ACGAGATCCCCTTCGCCGACCTCCTCCTCCTGCTGCTCTCGCCGGAAGCGGCAGCAGCGGGCGACG---------CCGAT
GGCCGGCGGCGCCGCCTCCTGGCCACCGTCTGGGCCGCGCTCGGCCCAGGCGGCACCGGGCTTCTGGCCGTCTCCGGTGT
CCCGCGCGCCGCCAACCTCCGCCGCCGGCTCCTCCCCCTGGCCCGCCGCCTCGCAATCATGGACCACCCTTCCCGCGCCC
ACCTCCTCAAGGTAACCAACCCCTCCCTCTGTAGTCTCATCGTCTTCCTCCTCCCGCCCCCTGTTCCTCTTCCCAAACTG
CGATTGCAGTGCGGCGGCCGTGGATTGACAGTGATTTCCTTCAATGGGGATTTGATTCCATTGCAGAAGTACGGATTGGG
CAGCGACGTGCCTCTTAAGAAGCCCGACAGGTCCGTCTCCTCCTTCGCGCGGCTCCTAAGG------CACGATTCAGGCA
AGCTCCACTCCCTGGAGTCGATGTGCGAAGCCACCGGAGACACCGAGATCAGGCCTGGTTGTCCGGACGGGGAACAAAAG
------------------------------GGTGATGCTGATG------------------------ATGACATGGAGAA
CCTTGGTGATCTTTTCAAGGAGCTGGGTCTGTGCATGATGGAGCTTGGCATCTTGGTTGCCCGGGCCTGCGACATTGTTA
TCGGTGGGAATCAGCTGGAGCAGAGCATTACCGACTCTGGAAGCGCAAAGGCGAGGCTCATCCACTACCACTCTGAGTTG
GATAACAGGATTATCAAGGAGATGAGCAGCACAAGGAGGAAAAACTTGGCAAACAAT------GCAGCAGCAGCAAGACC
TGTATCGGATCACATGGATACATATCAAATGCCAGGATCAGAAAGATCGAAAAAAGATGGGATGGCCGTTGTAAAGTCAG
CCGAAGAAAATGAGTCCCAAGGTGCCGCAGTACAAGGTCATGTCAGCACGATTTCTCTTGTGAACTTATGGCAAGAGTGG
CACTACGACTATGGAGTGCTGACAGTCTTAACAGCGCCATTATTCTTGCGCTCTGCTCTCGGACAGGAATGCCCGGTCAG
CGAAGAATGCTCTGTTCCTGATGGGCACTCACACCTGCAGCTCTTCAGTAAAAGGAGGATTTTCTCAGTGAGATGCTCCC
AGGAGAGCTTTATTGTTCAGGTTGGGGAGGCAGCAGGCATCCTGTCAGGGGGGAAACTGAGATCTACGCTTCATGCTGTC
AGTAGACCTTTAGGCTTGCCAAACATCAGCCGAGAGACTTTCGTGGTTTTCCTACAGCCGTCATGGGACAAAACTCTACC
TTTCTCGGGTTACTCTTGTGCCGATGAAGATGA---TTCAAGTGATCACATGGAATTGGCTTTCAGGGGTGATGGACCAG
CCGGGTGTTGTGGTGAACATATACTGATGCAGGAGATTCTGAAGAAGATCCCCCCGCTGTCGTCAAGGCTGAAAGAAGGA
ATGACGTTTGCAGAGTTTTCTAGGCAGACAACAAAACAGTATTATGGTGGTGGAGGCATCCAACAAAACAGTTAACC-AG
AAGACGTATGGTGATGGAAATGCATCTCATACAAACCGTAATGAAGTACTGAGTTCTACACC--GTATGTTGAGAATCCA
CTCTGTAATTACTCCATGCCACAGTATGC---------------------------------------------------
--------------------------------ACTTTTT-ATCTTTGTTGATGGCTTATTTTCTCGTGCAGTTGTGAAGT
CACAG-------------------TGTTTCGACCTCAAAAGTGCTGGTTTCCAATAGTTCAAAGTT--------------
---------------------------------CTTGTGTTAGTAAGTTTAGCTTCCTAAACTGATATTGATGATAGAGA
TGTAAAA--------------------------------------------AATGCTTACTTGCTCAGTTGTAAAAAATG
TTAAATATTTCAAAACTATTGATGTG-TCTGCATTCTCAGTTTCTCTTTTT-CATTCTAAGACTGTTGGGTTCCTAGTGT
TGCATCAGATCC------------------------------------------------------------AAGGTGTT
AAAGTATCATATGATCGATATACAGTAGCAGGAAAGCATGTATCTCTCTGGTTCGTTGGTAGTTTTAGCTTCCTAAACTG
ATATTGATGGTAGATATCTCACGTCAACGGAGGAAATCTGTCCAGCAATGGTTGGCAATTAGTCAACAAAATGCCCAGCT
GCAAATGAAGTTAAATGTTTGAAAAC------------TCTACACTTTGCAGTATCCCCTTTTCTTTCTAAGACTGCAGA
GATCCGAATGGTGGGTTTGAACTCGAAGTCTTGTTAATTTTGTTCCAGATCAGAGGTGTTAAAA-----------TCGGT
ATTCAGTAGCAGGAAAACC---CTCTGCTGTGCATGCTGGATAATAGTTTTCCCCTGTGAATCATTCAATTCCACTGTAC
ATGACTTAAATATTCTCATGCCACATCGGTGCGGTATACAGTAGCAGGAAAACAAGATAAGCAGTGTGGTCTATCTTGTT
TTCCTCTGTTTTT-TTGAGCGAGGATGATCTATGTCTCTTGTAAAGTGCAGAGCTTGATTAATTGTCACCGTGATTTCCT
GCTGAATTATACC-TTTAACTCCTTTAAGTCAAACCATACGAGTATGTTTCATCG-AAGATGAATATGTGGTATCTCTGC
CTATTGATGAATAGCTTGCTGTTGAGG-----GTAGCTGTCAGATTGG-TGATAGCTTGGAATCCATTGTTTGTTCCTAA
CAAAGTAGCAGGAAAAGCGGTGCACTGAAAGTGTAGCGCTGGTCATGGTTAAATTGATTATGTTAAGTTGTTAATTGGTC
GTTTTGCGTAAATGATGTTTGTTGGTTC-
>chr1D_1
TTTTATACTCCTGTTCTGTTCTTGACTGACGTGCTGAT----GGTCTTTCTTCTGTCACTCATTCCTAAGATTTTTGTAG
GGTTCGATCTATCTATCTATTTTTGTTTGTTTTTGTTG-GTGTTCCTGCGTCAACGGCGCGCCCGTGGATTTCGCTTATA
ACTTGTTATTGGTCCATGGTATATACAGCGGCACTGGCTCACAGAAGCAACAAACCATCTGAAGTCAGCAGGATTTTGGT
TTACCGGAAAATATGCTTTTAGTCCCTTAATTTTGCACAAAGTGTGTTTGCGTCTTTTTTGTCAACATTTTA--------
--------------------------------------------------------------TATGCTCCGTAATGAACA
GTAAAAA----------AGTAAAAGCATTCAAACAACTCTGAT--TTTTTGGGTGCAAATTGTGACAAATGTTCTCAGTG
CCTGAAA-ATTTCCATCCCGAAATAACGTTTGTGGAAGTTGTGGTAA---AAAACATTAAAATCGACACTCCCAAAATGC
TATTCTCGAAAGCATTTTAGAGTGTTGTTTCTTTTTTCATGACTTCCACGAATGTTATTTTGAGATGAAAATTTGCAAGC
ACTGAGAAATTTTCTC-AAAGTTTGCACCAGATTTATTTAAATTTTTTTACTTTGTTTTCACTTTTTCGGATTTACTA--
TTCATCCCGAGCTCATTTGAGCACGGGAGTAGAAGGGCACTTTCGTATG-GAGCGATATATTAGCCCTATAAATAATGTT
GGAGTACCCGCCTCGTGCGAGCTTTCGTGGGCGTGAGTGCCTTCCACGCCGTCTGTTGCACGGTGGTGCGCTCTTGGGTG
ACGTCCCTCGGGGGTCCATGACGGATGGACCGCGGGTGCGGCCAGGGCCATTGTCATGTGGTAACTTCGGCTGCACCGAC
GTATGTCGTCCTGTCCTCTGGCCCACGCACGAGAGACGGGTCAGACCCACCTGTCGGCATCTTCATCTCCGTGTTCTGCT
AGTTCGATCGCGACAAGTGGGGTGTGTGTCGTGCCAGCCGGCCAGTGCCAGAGACTGGCTCAGCGAGGAGGTCTGAGGCC
CTCCCGGTTGTTCGTTTCACGCTATCCCTTAATTTTGCACATAGTATGTGTATGGGTCTTTTTTGTCAACATTTTATCCC
TCCTGCTCGGCACGATTGATCCAAAACCATATCGAGCGAGGACGCGGAGTATTAGTCCCGAGCTCAGATGCTCCCTAATG
AACAGAAAAGTAAAAATAAATACTAAAAGCATTAAAAACTGATTTTTTTTCGTGTGCAAATTGTGACAAATGTTCTCGGT
GCTTGAAATATTTTCATCTCGAAATAACATTTGTGGTAGTCGTGGTTAAAAAACCGACACTCCGAAAATGCTATTCTCGA
AAGAATTTTAGAGTGTTGTTTCTTTTTCCATGACTTCCGTGAATGTTATTTTGAGATGAAAAATAGCAAGCACTAAGAAA
ATTTGTCAAAGTTTGCACCAGAAAAATTCAGAATTTTTTATATTGTTTTCAATTTTTTTTAGAATTTACTATTCATCCAG
AGCTCAAATGCCAGAGCTCAAATGAGCTGGGGAGTAGAAGGCGACTTTTCGTATCGAGCAATATATTACTCCAATAAAGA
ATATTGGAGTACCTGCCTCCTGAGAGCTTTTGCGGGCGAGAGTGCCCTCCACGCCGTCCATTCCACGG------------
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--------------------------------------------------------------------TGGCAAGAGTGG
CACTATGACTATGGGGTGCTGACAGTCTTAACAGCGCCATTATTCTTGCGCTCTACTCTCGGACAAGAATTCCCGGTCAG
CGAAGAATGCTCTCTTCCTGATGGGCACTCACACCTGCAGCTCTTCAGTAAAAGGAGGGTATTCTCAGTGAGATGCTCCC
AGGAGAGCTTCATTGTTTAGGTTGGGGAGGCAGCAGGCATCTTGTCATGGGGGAAACTGAGATCTACGCTTCATGCTGTC
AGTAGACCATTAGGATTGCCAAACATCAGTCGGGAGACTTTCCTGGTTTGCAC-CAGCCGTCATGGGACAAAACTCTACC
TTTCTCGGGTTACTCTTCTGCCGATGAAGATGA---TTCAAGTGATCACATGGAATTGGCCTCCAGGCATGATGGATCAG
CCGGGTCTTGTGGTGAACATACATTGTTGCAGGAAATTCTGAAGAAAATCCCCCCGCTGTCGTCAAGGCTGAAAGAAGGC
ATGACGTTTGCAGAGTTTTCTAGGCAGACAACGAAACGGTATTATGGTGGTGCAGGCATC--------------------
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>chrUn_955
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---------------------------------------------------------------------------CACGC
TGGGCCACCCTGGACTGGAAGGTTCCGGACCCGAGC-----CCATGGCGGAGACGGCGCCGGCGACGGCGCTGGACATCG
ACGAGATCCCCTTCGCCGACCTCCTCCTCCTCCTGCTCTCGCCGGAAGCGGCAGCAGCGGGCGACGACAGCGACACCGAT
GGCCGGCGCCGCCGCCTCCTGGCCACCGTCTGGGCCGCGCTCGGCCCGGGCGGCGCCGGCCTGCTGGCCGTCGCGGGCGT
CCCGCGCGCCGCCGCCCTCCGCCGCCGTCTCCTCCCCCTGGCCCGCCGCCTCGCCCTAATGGACCACCCGTCCCGTGCCC
ACCTCCTCAAGGTAACCAACCCCTCCCTCCGTAGTCTCATCGTCT---TCCTCCCGCCCCCTGTTCCTCTTCCCAAACTG
CGATTGACAGTGA--------------------ATTTCCTTCAATGGGGATTTGATTCCATTGCAGAAGCACGGATTGGG
CAGCGACGTGCCTCTCAAGAAGCCCGACAGGTCCGTCTCCTCCTTGGCGCAGCTCCTAAGG------TATGATTCAGGCA
AGCTCCACTCCTCAGAGTTTATGCGCGAAGCCACCGGAGACACCGAGATCAGGCCTGGTTGTCCGGAGGAGGTACTGGAA
GGTGCCGATGGATTTGGGGAGCACAATGGTGATGATGATGATGATGATGATGATGATGATGATGATCATGATATTGAGAA
CCTTGGTGAGCTTTTCAAGGAGCTGGGTCTGTGCATGATGGAGCTTGGCATCTTGGTTGCGCGGGCTTGCGACATTGTTA
TCGGTGGGAATCAGCTGGAGCAGAGCATTACCGACTTTGGCAGCGCAAAGGCGAGGCTCATCCACTACCACTCTGAGTTG
GATAACAGGATTATCAAGGAGAGGAGCAGCACAAAGAGGAGAAGCTTGGCAAACAATGCAGCAGCAG---CAGCAAGACG
TTTATCGGATCACATGGATACAGGTCAAATGTCAGGATCAGAAGATGGATCCTGTATC---------------AAATCAG
CAGAAGAAAATAGTTT---------------------------------GATTTCTCTTGTCAACTTATGGCAAGAGTGG
CACTACGATTACGGGGTGCTGACAGTCTTAACAGCGCCATTATTCTTGCGCTCTGCTCTCGGACAGGAATGCCCGGCCAG
CGAAGAATGCTCTCTTCCTGACGGGCACTCACACCTGCAGCTCTTCAATAAAAGGAGGATATTCTCAGTGAGATGCTCCC
AGGAGAGCTTCATTGTTCAGGTTGGGGAGGCAGCAGGCATCCTGTCAGGGGGGAAGCTGAGATCCACGCTTCATGCTGTG
AGTAGACCATTAGGCTTGCCAAACATCAGCCGAGAGACTTTCGTGGTTTTCCTACAGCCGTCATGGGACAAAACTCTACC
TTTCTTGGGCTACTCTTCTGCCGATGAAGATGA---TTCAAGTGATCACATGGAATTGGCTTTCAGGGGTGATGGACCAG
CCGGGTCTTGTAGTGAACATATATTGATGCAAGGAATTCTGAAGAAAATCCCCCCGCTGTCGTCAAGGCTGAAAGAAGGC
ATGACGTTTGCAGAGTTTTCTAGGCAGACAACGAAACGGTATTATGGTGGTGGGGGCATCCAACAGAAGAGTTAACC-AG
AAGACGTATGGTGATGGAAATGCATCTCATACAAACCGTAATGAATTACTGAGTCCTACACC--GTATGCTGAGAATCCA
CCCTGTAATTACTCCATGTCACAGTATGTACTCCCTCTGTAAACTAATATAAGAACATTTAGATCACTACTTTAGTATTC
TAAACGCTCTTATATTAGTTTACGGAGGGAGTACTTTTT-ATCTTCATTGATGGATTATTTTCTTCTGCAGTTGTGAAGT
CACAG-------------------TATTTCGACCTCAAAAGTGCTGGTTTCCGATAGTTTAAAGTT--------------
---------------------------------CTTGTGTTAGTAAGTTTAGCTTCCTAAACTGATATTGATGATAGAGA
TGTAAAA--------------------------------------------AATGCTTACTTGCTCAGTTGTAAAAAATG
TTAAATATTTGAAAACTATTGGTGTGCTCTGCATTCTCAGTTTCTCCTTTTCCATTCTAAGACTGTTGGGGTCCTAGTGT
TGCATCAGATCTGTTTAGTTCAACCACAAGGCACGTTTGAACTTGAAGCCTTCTTAATTTTATTCCACACCTGAGGTGTT
AAAGTAAGATATGATCGATATACTGTAGCAGGAAAACATGTATCTCTGTGGTTCGTTGATAATTTTAGCTTCCTAAACTG
ATATTGTTGGTAGATATCTCACATCAACCGAGGAAATCTGTCGAGCAATGGTTGGCAATTAGTCAGCACAATGCCCAGCC
ACAAAAGAAATTAAATGTTTGAAAACTATTA-TGACATTCTACACTTTGCAGTATCTCCTTTTCTTTCTAAGACT--AGA
GATCCGAATGGTGGGTTTGAACTCGAAGTCTTCTTAATTTTGTTCCAGATCAGAGGTGTTAAAAGTAGGGTATGATCGGT
ATTCAGTAGCAGGAAAACCCTTATCTGCTATGCATGCTGGAAAATAGTTTTCCACTGTGCATCACTTAATTCCACTCTAC
ATGACTTAAATATTCTCATGCCACATCGGTGCGGTATACAGTAGCAGGAAAACAAGATAATCAGTGTGATCTATCTTGAT
TGCCTCTGTTTTT-GTGAGCGAGGATGATCTATATCTCTTGTAAAGTGCAGACCTCGATTCATTGTCACCGCGATTTCCT
GCTGAATTATACC-TTTAACACTTTTAAGTCAAACCATATGAGTATGTTTCATCA-AACATGAATATGTGGTATCTCTGC
CTATTGACGAATAGCTTGCTGTTGAGG-----GTAGTTGTCAGAATGTTTGATAGCTTCGAATCCATTGTTAGTTCCTAA
CAAAGTAACAGGAAAAACGGTGCGCTGAAAGTGTAGCGCTGCTCATGGTTAAACTAATTATGTTCAGTTGTTAACGGGTC
GTTTTGGGTAAATGATGTTTGTTGGTTC-
>SNPs
----------S---------S--------------S--------------------------------------------
-------------------------------------SS-------------------S----SSS-SSSSSS-SSSSSS
SSSSSSS-SS-SSSS-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S--------S--------------------
----S-----------S-S----------------------------SSS----S------------------------S
------------------------------------------------------------------S-------------
-----S-----S-S--S-------------S-SS-S-SSS----------S--SSS-SSSSS-----SS-SSS-SSSSSS
-------S-------SS-------------------S------SSSS-SS-------------S---------S------
S---------S---S--S------------S--S----------------S---S-----------S------S------
------------S---------S---S----S-----------S---------------------------S----S--S
--SS-S----------SS-----------S----S--S----S-------S------------S-----------SSSS-
SSSSSSSSS-SS-S-S-SSSSS-SS-SSSSSSSSSS--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S-S---S-S----SS-SS-S--SS-----S-SSSSSSSSS-SS-SS--S--SS-S-SSSSS--SSSS-SSSSS-SSS
-SSSSS-S-S-SSSS-SSSSSSSSSSSSSSSSSS-SSSSS-SSSSSSS--SSSSSSSSSSSSSSSSSS-SS-SS-SSSSS
--------------------------------------------------------------------------------
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----------------------------------------------------S-----------S--SSSS---------
----------------------------------S--------------------------------S-----------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------SS---------------
S------------S--S------------------------SS-S---------S-------------------------
----------------------------S--S------------------------------------------------
---------S--S------------------------------------------------SSSSSS-------------
---------------------SSSSS---S---------S--SS---S-S-SSS-S------------------------
----S---S------------S----S-------------S---------------------------------------
--------------------------------------------------------------------------------
-------S--------------------------------S-----------------------S--------S------
----S--------------------------------------------S---S--------------------------
------S------------------------------------------------S------------------------
-------------------------------------------------S------------------------------
--------------------------------S------S----------------------------------------
----------------------------------------------S-------------------S-------------
-----------------------------------------------S--------------------------------
--------------------------S-----------------S--S--------------S--------------S--
------------------------------S--SSS--------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
----S-S----S--------------------------------------------------SS----------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
---S-SSSSSSSSSSSSSSSSSSS----------------SS-----S------S-S--SSSS--SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S------------------------------S----S--
-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---S------------------
----S-S--------------S-------SS--------S-----------S--S--S----------------------
-----------S-S------------S---S----S-----S-------------------------S-S----------
---S----S-------S------------------S-----SS-----------S--------------------S----
--------------S----------S--S---------------------------------------------------
-S-----------------------S-----S--------------------------------------------S---
-------------------------------S-S----------------------------------------------
---------------------------------------------------------------------S----------
-------S---------S--------S-----------------------------------------------------
-------------S----------S-------S-----------------------------------------------
-------------S-----------------------------------------S------------------------
-------------S----SSS---SS-SSSSS--------------------------------S---------------
--------------------S----------------S-----------------S------------------------
------S-------------S-------S
>forward_1488
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------ACATGTTCATTGGCCACCCT--------------------------------
--------------------------------------------------------------------------------
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-----------------------------
>reverse_5442
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-CGCATCAACACAGGAGACCT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>forward_4168
--------------------------------------------------------------------------------
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--------------------------------------------------------------------GCGACATTGTTA
TCGGTGGC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------
>reverse_5716
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-----------------------------------CCATGTGCCTCTCTGGTTCC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
