>input_sequence_42834
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--AGTCTCTCCCCCTTCCCTTGTTCCTAAACCCGCCTCTCTCTCCCTCTTTCACACACGCCTCTCTCTC-----CTC---
----------TCTCTCGGCGTCCATTTCCTCTTCTTCTAGCTAGCTTGCTTCGGTGCCCGGCTT----------------
-----GCGGAGATGTCTGAGGCGTCGGTGATAAACCAGGCGGAGGTGGAGGACGCGGCGGCGGCGGC------CGGTCTG
GACCTGCCGCCGGGCTTCCGGTTTCACCCCACGGACGAGGAGATCATCTCGCACTACCTCACCCCCAAGGCGCTCGACCA
CCGCTTCTGCTCCGGCGTCATCGGCGAGGTCGACCTCAACAAGTGCGAGCCATGGCATCTCCCAGGTACACAACACACCC
AAATTAAGCTGCTCCTTTGCGCGCACTTTCTCTCATCTTGCTTGATCCGAGCCCGACCGGCCGCGGGAATCTTGCCTTAC
TTACTCCCGTGTTTCTACCGGACAGGCAAGGCCAAGATGGGCGAGAAGGAGTGGTACTTCTTTTGCCACAAGGACCGCAA
GTACCCGACGGGGACGAGGACGAACCGCGCCACCGAGAGCGGCTACTGGAAGGCCACCGGCAAGGACAAGGAGATCTTCC
GCGGGAGGGGCCTCCTCGTCGGAATGAAGAAGACGCTCGTCTTCTACCTAGGCCGCGCCCCCCGCGGCGAGAAGACCGGC
TGGGTCATGCACGAGTTCCGCCTCGAGGGCAAGCTCCCCCACCCGCTCCCGCGCTCCGCCAAGGTTTGCTTTCG---CTC
CTTCCTGATTCATTATCAAGTATTTTTCTCCTTAATTTCTTTCTGGCTTCATTCATGATTTGCTGCTAAATATGA-TATA
TGATTCGCGTGCAGGACGAGTGGGCCGTGTCCAAGGTGTTCAACAAAGAGCTCACGGCCACCAACGGGGCAATGGCAGCG
GCGGACGCCGGGATCGAGCGGGTCAGCTCCTTCGGCTTCATCACTGACTTCCTTGACTCTGGGGAGCTGCCGCCCCTCAT
GGACCCTCCCTTGGGCGGCGACGTCGACCAAGTCACCGATTTCAAGTCCACCTCTGCCTACGCCACCGGTGCCCATTCCG
GACACCAGGTTAAGATGGAACAGCACATGCCGCAGCAGCCGCCGCACATGATGTACTCGAGCCCCTACTTCTCCCTGCCG
GCCGCTAACTCCGGCGACATGTCGCCGGCGATCCGGAGGTACTGCAAGGCAGAGCAGGTCTCGGGGCAGACGTCTGCGCT
CAGCCCGTCCCGCGAGACCGGGCTGAGCACCGACCCCAACGCCGCCGGTTGCGCGGAGATCTCGTCGGCGGCGACACCGT
CGTCTCAGAATCAAGAGTTCCTTGACGAATTCGACGAGTACCCCGCCCTGAACCTCGCCGACATTTGGAAGTACTGAAGC
CAGCCGGAGCTGCACCTACCGCAT------GATTCGCTCGTCGATTGGTTCTGGCTCGTTGATTAATTACTGAATTGGAT
TACTTAACTTGGTATGTGATGCTGGTGTTAGTGGTTTGCTGATGCAGCATCATCTTCTTTCCGGAGGATTCTCGGGTCGG
ATCGGATCAGGTTACTATCCATCCATC----CAGACAGACCTCCAGGGATTAGCTAGGCCTCC----------TTATGTT
A---ATTAATTAAATTAGTCCTCGGTTCATATCTTGATCTGTGTGTACATACCACTACCACAACAGC--TATTCTGATTG
TGATTA-------GCAGTAGCAGCATGATGGT---CATACAATTAATGTGTGTAGATTAGGGGGGACGACTTGAGATCCA
TTTGTGAATCGATTAATTTGGGCGCTGTTGATGAGCCAGGCAGCTAGCGCTACTACTAGCTTTGTATGGA----------
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>chr4A_1_TraesCS4A01G130600
ACAGGAGCGCGTCACCATTTCGCCTTCCTTTTAAAGCGGGAGATGTATACCGCTTAATGAGTGAAAGGTTGAAAACTTTG
GGAGCGCTCCCCGATGATGGCACCGCGCGTGTCCTGTCCACTTGGGAAAGGGAAACCCCTGCTCGGCGAGTCGGATGCTC
ATCGCTTTTGGTTC-GGCCGCGAGGCAAAGCGCGCGCGTATCTTTGCAGAAAATTGTCGTGGTCGCGGGCTCTCTCGATG
GCACGTCGCTCCTGTAA---ACAAACGACCCAAGAAAGTCTCGAACTAAAAAGATGCGGAGGAGAAAGCAGAAGGGAACG
GGACAACCACGGATCAATATCTGACGTGAACTGGATGTGTGGATTCCGCGAGAGTTACAAATATAGCTGCCATATCAACC
TCTAATCATCCCTTGATTTGATTAAAAAAAAACTGGATGTGGTTAGTGTTACTACTCTATGGTTCTTGCGTTGTGGCCCA
GCGCGGATGGGTTGAATTCTTCTGGCTGCATGTGGCTGCCGGAGTATGAA----------CAAAGTCAGAGTAATCAAAC
CAACATTAAAACAAATGTGTATATGTATGAACTACCAGTACTGGTGTGGG--------------TTTATTTAAGGGAGAT
TTTTTTTGTTATAAATAATAAGAAGTCAGGTTCTGTCCAACGCATGATTGCCGCGTTAGCCGTGATCGGACGTGAATATT
CATTCCAGAGGACAGGACACCGGCCGGTGGTGGAGGAGAAGATACTCTGAATGTGAGAGCG---TTTTTTTTTTCTGAAT
GTGAGAGAGTTGGGGCCT-A---AGAGGATGAATGAGGAGCCATTAAGATTAGGACAAGTAATTAGAGTTGCTTACGGGC
CACA------ACTGCGCGCGGTAAGAAGTGAAAGATGGGAGGGGTCTTGGCCCGCAAGCCGCCTCC-GCACGCGGCACGC
CTCTCTCTCTCTCTCTCTCTCTCTGCGCGAGTGACCGCGTGGAGCCTTATATAAGCCGGCCCTCGGTTCCTCCCCCCGGC
CCAGTCTCTCCCCCTTCCCTTGTTCCTAAACCCGCCTCTCTCTCCCTCTTTCACACACGCCTCTCTCTC-----CTC---
----------TCTCTCGGCGTCCATTTCCTCTTCTTCTAGCTAGCTTGCTTCGGTGCCCGGCTT----------------
-----GCGGAGATGTCTGAGGCGTCGGTGATAAACCAGGCGGAGGTGGAGGACGCGGCGGCGGCGGC------CGGTCTG
GACCTGCCGCCGGGCTTCCGGTTTCACCCCACGGACGAGGAGATCATCTCGCACTACCTCACCCCCAAGGCGCTCGACCA
CCGCTTCTGCTCCGGCGTCATCGGCGAGGTCGACCTCAACAAGTGCGAGCCATGGCATCTCCCAGGTACACAACACACCC
AAATTAAGCTGCTCCTTTGCGCGCACTTTCTCTCATCTTGCTTGATCCGAGCCCGACCGGCCGCGGGAATCTTGCCTTAC
TTACTCCCGTGTTTCTACCGGACAGGCAAGGCCAAGATGGGCGAGAAGGAGTGGTACTTCTTTTGCCACAAGGACCGCAA
GTACCCGACGGGGACGAGGACGAACCGCGCCACCGAGAGCGGCTACTGGAAGGCCACCGGCAAGGACAAGGAGATCTTCC
GCGGGAGGGGCCTCCTCGTCGGAATGAAGAAGACGCTCGTCTTCTACCTAGGCCGCGCCCCCCGCGGCGAGAAGACCGGC
TGGGTCATGCACGAGTTCCGCCTCGAGGGCAAGCTCCCCCACCCGCTCCCGCGCTCCGCCAAGGTTTGCTTTCG---CTC
CTTCCTGATTCATTATCAAGTATTTTTCTCCTTAATTTCTTTCTGGCTTCATTCATGATTTGCTGCTAAATATGA-TATA
TGATTCGCGTGCAGGACGAGTGGGCCGTGTCCAAGGTGTTCAACAAAGAGCTCACGGCCACCAACGGGGCAATGGCAGCG
GCGGACGCCGGGATCGAGCGGGTCAGCTCCTTCGGCTTCATCACTGACTTCCTTGACTCTGGGGAGCTGCCGCCCCTCAT
GGACCCTCCCTTGGGCGGCGACGTCGACCAAGTCACCGATTTCAAGTCCACCTCTGCCTACGCCACCGGTGCCCATTCCG
GACACCAGGTTAAGATGGAACAGCACATGCCGCAGCAGCCGCCGCACATGATGTACTCGAGCCCCTACTTCTCCCTGCCG
GCCGCTAACTCCGGCGACATGTCGCCGGCGATCCGGAGGTACTGCAAGGCAGAGCAGGTCTCGGGGCAGACGTCTGCGCT
CAGCCCGTCCCGCGAGACCGGGCTGAGCACCGACCCCAACGCCGCCGGTTGCGCGGAGATCTCGTCGGCGGCGACACCGT
CGTCTCAGAATCAAGAGTTCCTTGACGAATTCGACGAGTACCCCGCCCTGAACCTCGCCGACATTTGGAAGTACTGAAGC
CAGCCGGAGCTGCACCTACCGCAT------GATTCGCTCGTCGATTGGTTCTGGCTCGTTGATTAATTACTGAATTGGAT
TACTTAACTTGGTATGTGATGCTGGTGTTAGTGGTTTGCTGATGCAGCATCATCTTCTTTCCGGAGGATTCTCGGGTCGG
ATCGGATCAGGTTACTATCCATCCATC----CAGACAGACCTCCAGGGATTAGCTAGGCCTCC----------TTATGTT
A---ATTAATTAAATTAGTCCTCGGTTCATATCTTGATCTGTGTGTACATACCACTACCACAACAGC--TATTCTGATTG
TGATTA-------GCAGTAGCAGCATGATGGT---CATACAATTAATGTGTGTAGATTAGGGGGGACGACTTGAGATCCA
TTTGTGAATCGATTAATTTGGGCGCTGTTGATGAGCCAGGCAGCTAGCGCTACTACTAGCTTTGTATGGAATCCGCTTTG
TATGTACATGTACCACCATTGATCATTAATTGCTTGAGTTTGACATGTCACTATGTGAATCGATGCTT-GTGTTCTCTCT
GTGCCGCTTTACACTTGGTAATCAATCAAGACGAG-----------------ACTCGACGAGACGAGAGGCACTGGTACC
AGTTGTGGTGCTGCTCATGGGGACCTTCCGAAATCTTTTTTTTTTTGAGACAACCTTCCGAAATCTAGCAAGGGGAGATA
TGACATGGATGGATGGATGGATCATGGTTTTGGGCCGACGGATGGGGCCTCCGCGGGCTTGTTTGGATCGCCCAATTATT
CCCGGAGCACGTCGTGGGCATGGCGTCCAGTTGGCGAACTCCTCTAGTTTTTTCCCTCCTGTTAGGGTTTTGCTCCTCCC
GGAGGTGCTCTGTCGCCGCCGTTGAGATATTATCTTCCCTCCTCCGATCTACCCTCGTCTGATGATTCGGGCTGACTAAG
GGGTGATCCTTGCATCACTTCCCGGCCTTGATCGTCGACTTGGATTCGAGAAGAGAGCTAGGGTTCGCTT-CACCGCCCG
ATCTATTC---CGTTCGGGCTAGGGTTCAAGG-TTTCGTCTGCGGCGATGGGAGCGAATGCCCATGAGGCGTCGGGCTCA
GGATCCGCGACAGAGATAGACAGGATGATGGCTGAGTTGGGTCTCAGAGAGGAGGATCTCGACGATGTTGTTTTTGATGA
TAAAGCGGCGCCGCCAGAGTCTACCAGGTGGAGGGCTGTTGCTAGGGTTCATATAGATAAACCATACAGTCAATACTGGT
TCTTCAAGAACATGAGGTCAGCCTGGGACCTTGCGCATGATGTTAAGTTCCGCCCCCTCGAAGATAATCTCTACACGATG
CAATTTTTCTGCTTGGGAGATTGGGAAGGTGTCATGCAGGAGGGGCCGTGAAATTTCAGAGGAAACGCTGTGGTCATAGA
GCCTTATGATGGAATTACTACGCCAACAGAGGTGAATCTAGATCATCTCAATA
>chr4B_1
ACAGGAGCGCGTCACCATTTCGCCTTTCTTTTAAAGCTGGAGATGTGTACCGCTTGATGAGTGAAAGGTTGAAAACTTTG
GGACCGCTCCCCGATGATGGCACCGAGCGTGTCCTGTCCACTTGGGAAAGGGAAAACCCTGCTCGGCGAGTCGGATGCTC
ATCGCTTTTGGCTC-GGCCGCAAGGCAAAGCGCGCGCGTATCTTTGCAGAAAATTGTGGTGGTCGCGGGCTCTCTCGATG
GCACGTCGTTCCTGTAA---ACAGACAACCCAAGAAAGTCTCGAACTAAAAAGATGCGGATGAGAAAGCAGACGGGAACG
GGACAACCACGGATCAATATGTGACGTGAACTGGATGTGTGGACTCCGCGAGAGTTACAAA--TAGCTGCCATAGCAACC
TCTGATCATCCTTTGATTTGATT-GAAAGAAACTGGATGTGGTTAGTGTTACTACTCTATGGTTCTTGCGTTGTGGCCGA
GAGCGGATGAGTTGAATTCTTGTGGATGCA------TGTGGGGATATGCCGGTTTCCTTCCAAAGTCAGAGTAATCAAAC
CAACATTAAATC-AATGTGTATATGTATGAACTACTACTACTACTACTACTCCTACTATGGGTTTTTATTTAAGGGAGAA
AATATT--TTATAAATAAGAAGAAGTCAGGTTGTGTCCAACGCATCGTTGCCGCGTTAGCCGTGATCGGACGTGAATATT
CATTCCACGGGACAGGACACGGGCCGGTGGAGGAGGAGAAAATACTCTGAATGTGAGAGAGTTCTTTTTTTTTTCTGAAT
GTGAGAAAGTTGGGGCCT-AGGTAGAGGATGAATCAAGAGCCATTAAGATTAGGACAAGTAATTAGAGTTGCTTACGGGG
CACA------ACTCCGCGCGGTAAGAAG-------TGGGAGGGGTCTTGGCCCGCAAGCCGCCTCCCGCACGCAGCACGC
CTCTCTCTCTCTCT----------GCGCGAGTGACCGCGTGGAGCCTTATATAAGCCGGTCCTCGGTTCCTCCCCCCGGC
CCAGTCTCTCTCCCTTCCCTTGTTCCTAAACCCGCCTCTCTCTCCCTCTTTCACACACGCCTCTTCCTCTTCCTCTC---
----------TCTCTCGGCTTCCATTTCCTCTTCTTCTAGCTAGCTTGCTTCGGTGCCCGGCGGAGTTGGGGCACGCGCG
CGCGCGCGGAGATGTCTGAGGCGTCGGTGGTAAACCAGGCGGAGGTGGAGGACGCGGCGGCGGCGGCGGCGGCCGGGCTG
GACCTGCCGCCGGGGTTCCGGTTCCACCCCACGGACGAGGAGATCATCTCGCACTACCTCACCCCCAAGGCGCTCGACCA
CCGCTTCTGCTCCGGCGTCATCGGCGAGGTCGACCTCAACAAGTGCGAGCCATGGCATCTCCCAGGTACACAACACACCC
AAATTAAGCTGCTCCTTTGCGCGCA-----------CTTGCTTGATCCGAGCCCGAGCGGCCGTGGGAATCTTGCCTTAC
TTAGTCGCGTGTTTCCACCGGACAGGCAAGGCCAAGATGGGCGAGAAGGAGTGGTACTTCTTTTGCCACAAAGACCGCAA
GTACCCGACGGGGACGAGGACGAACCGCGCCACCGAAAGCGGCTACTGGAAGGCCACCGGCAAGGACAAGGAGATCTTCC
GGGGGAGGGGCATCCTCGTCGGAATGAAGAAGACGCTCGTCTTCTACCTAGGCCGCGCCCCCCGCGGCGAGAAGACCGGC
TGGGTCATGCACGAGTTCCGCCTCGAGGGCAAGCTCACTCACCCGCTCCCGCGCTCCGCCAAGGTTTGCTTTCGATCCTC
CTTCCTGATTCATTATCAATTATTTTTCTCCTTAATTTCTCTCTGGCTTCATTCATGAG----TGCTAAATATGAGTATA
TGATTCGCGTGCAGGACGAGTGGGCCGTGTCCAAGGTGTTCAACAAAGAGCTCACGGCCACCAACGGGGCAATGGCAGCG
GCGGAGGCCGGGATCGAGCGAGTCAGCTCCTTGGGCTTCATCACTGACTTCCTTGACTCTGGGGAGCTGCCGCCCCTCAT
GGACCCTCCCTTGGGCGGCGACGTCGACGAAGTCATCGATTTCAAGTCCACCTCTGCCTACGCCACCGGTGCCCATTCCG
GACTCCAGGTTAAGATGGAACAGCACATG---------CCGCCGCACATGATGTACTCGAGCCCCTACTTCTCCCTGCCG
GCCGCCAACTCCGGCGACATGTCGCCGGCGATCCGGAGGTACTGCAAGGCGGAGCAGGTCTCGGGGCAGACGTCTGCGCT
CAGCCCGTCCCGCGAGACCGGGCTGAGCACCGACCCCAACGCCGCCGGTTGCGCGGAGATCTCATCGGCGGCGACACCGT
CGTCTCAGAATCAAGAGTTCCTTGACCAATTCGACGAGTACCCCGCCCTGAACCTCGCCGACATTTGGAAGTACTGAAGC
CGGCCGGAGCTGCACCTACCACAT------GATTCTCGC-TCGATTGGTTCTGGCTCGTTGATTAATTACTCAGTTGGAT
TACTTAACTTGGTGTGTGATGCTCGTGTTAGTGGTTTGCTGATGCAGCATCATCTTCTTTCCGGAGGACTCTCGGG----
-TCGGATCAGGTTACTATCTATCCAGACAGACCGACAGACCTCCAGGGATTAGCTAGGCATCC----------TTAATCA
TGTTATTAAATTAATTAGTCCTAGGTTCATATCTTGATCTGTGTGTACATATCACTACAA------CTATATTCTGATTG
TGATTAATTACTAGCAGTAGCAGCATGATGGT---TATACAATTAATGTGTGTAGATTAGGGGGGACGACTTCAGATCCA
TTTGTGAATCGATTAATTTGGGCGCCGTTGATGAGCCAGCCAGCTAGCTCTACTACTAGTA-------------GCTTTG
TATGTACATGTACCACCATTGATCATTAATTGCTTGAGTTTGACATGTCACTATGTGAATCGGTGCTT-GTGTTCTCTCT
GTACCGCTTTGCACTTGCTAATTAATCACTGGGTTGCTCCTTTCTGG---------------------------------
--------TGCTGCTCATGGGG------------------------------ACCTTCCGAAATCTAGCAAGGGGAGATA
TGAGATAA---------------ATGGTTTTGGGCCGACGGATGGGGCCACCGCGGGCT------------CCAATTATT
CCCGGAGCACGTCGTGGTCATGGCGTCCAGTTGGTGAACTC---------------------------------------
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>chr4D_1
ACAGGAGCGCGTCACCATTTCGCCTTCCTTTTAAAGCGGGAGATGTATACCGCTTGATGAGTGAAAGGTTGAAAACTTTG
GGACCGCTCCCCGATGATGGCACCCAGCGTGTCCCGTCCACTTGGGAAAGGG-AAACCCTGCTCGGCGAGTCGGATGCTC
ATCGCTTTTCAGTTGGGCCGCGAGGCAAAGCGCGCGCGTATCTTTGCAGAAAATTGTCGTGGTCGCGGGCTCTCTGGATG
GCACGTCGCTCCTGTAATAAACAAACAACCCAAGAAAGTCTCGAACTAAAAAGATGCGGATGAGAAAGCAGAAGGGAACG
GGACAACCACGGATCAATATCTGACGTGAACTGGATGTGTGGACTCCGCGAGAGTTACAAATA-AGCTGCCATAGCAACC
TCTGATCATCCTTTGATTTGAGTGGAAAAAAACTGGATGTGGTTAGTGTTACTAATCTATGTTTCTCGCGTTGTGGCCCA
GCGCGGATGGGTTGAATTCTTCTCGCTGCATGTGGGTGTGGGGATATGCCGGTTTCCTTCCAAAGTCAG-GTAATGAAAC
CAACATTAAATC-AATGTGTATATATATGAACTACTAGTACTACTGTGGG--------------TTTATATTTAAT----
--------------ATAAGAAGAAGTCAGGTTCTGTCCAACGCATGATTGCCGCGTTAGCCGTGATCGGACGTGAATATT
CATTCCACGGGACAGGACACCGGCCGGTGGAGGAGGAGAAAATACTCTGAATGTGAGAGAG---TTGGG-----------
--------GTTGGGGCCTAAGGAAGAGGATGAATCAAGAGCCATTAAGATTAGGACAAGTAATTAGAGTTGCTTACGGGC
CACACCCACAACTGCGCGCGGTAAGAAGTGAAAGACGGGAGGGGTCTTGGCTCGCAAGCCGCCTCC-GCACGCGGCACGC
CTCTCTCTCTCTCTCTCTCTCTCTCTGGGAGTGACCGCGTGGAGCCTTATATAAGCCGGCCCTCGGTTCCTCCCCCCGGC
CCAGTCTCTCTT-----CCTTGTTCCTAAACCCGCCTCTCTCTCCCTCTTTCACACACGCCTCTCCCTCTTCCTCTCGCT
CCTCTCTCTCTCTCTCGGCGTCCATTTCCTCTTCTTCTTGCTAGTTTGCTTCAA----------AGTTGGGGCA----CG
CGCGCGCGGAGATGTCTGAGGCGTCGGTTTTAAACCAGGCGGAGGTGGAGGACGCGGCGGCGGCGGC------CGGGCTG
GACCTGCCGCCGGGCTTCCGGTTCCACCCCACGGACGAGGAGATCATCTCGCACTACCTCACCCCCAAGGCGCTCGACCA
CCGCTTCTGCTCCGGCGTCATCGGCGAGGTCGACCTCAACAAGTGCGAGCCATGGCATCTCCCAGGTACACAACACACCC
AAATTAAACTGCTCCTTTGC----ACTTTCTCTCATCTTGCTTGATCCCAGCCCCACCGGCCGCGGGAATCTTGCCTTAC
TTACTCGCGTGTTTCGTCCGGACAGGCAAGGCGAAGATGGGAGAGAAGGAGTGGTACTTCTTTTGCCACAAAGACCGCAA
GTACCCGACGGGGACGAGGACGAACCGCGCCACCGAGAGCGGCTACTGGAAGGCCACCGGCAAGGACAAGGAGATCTTCC
GGGGGAGGGGCGTCCTTGTCGGAATGAAGAAGACGCTCGTCTTCTACCTAGGCCGCGCCCCCCGCGGCGAGAAGACCGGC
TGGGTCATGCACGAGTTCCGCCTCGAGGGCAAGCTCCCCCACCCGCTCCCGCGCTCCGCCAAGGTTTGCTTTCG---CTC
CTTCCGGATTCATTATTAAGTATTTCTCTCCTTAATTTCTTTCTGGGTTCATACATGATT---TGCTAAATATG---ATA
TGATTTGCGTGCAGGACGAGTGGGCCGTGTCCAAGGTGTTCAACAAAGAGCTCACGGCCACCAACGGGGCAATGGCAGCG
GCGGAGGCCGGGATCGAGCGAGTCAGCTCCTTCGGCTTCATCGGTGACTTCCTTGACTCTGGGGAGCTGCCGCCCCTCAT
GGACCCTCCCTTGGGCGGCGACGTCGACGAAGTCATCGATTTCAAGTCCACCTCTGCCTACGCCACCGGTGCCCATTCCG
GGCTGCAGGTTAAGATGGAACAGCACATGCCGCAGCAGCCGCCGCACATGATGTACTCGAGCCCGTACTTCTCTCTGCCG
GCCGCTAACTCCGGCGACATGTCGCCGGCGATCCGGAGGTACTGCAAGGCGGAGCAGGTCTCGGGGCAGACGTCTGCGCT
CAGCCCGTCACGCGAGACCGGGCTGAGCACCGACCCCAACGCCGCCGGTTGCGCGGAGATCTCGTCGGCGGCGACACCGT
CGTCTCAGAATCAAGACTTCCTTGACCAATTCGACGAGTACCCCGCCCTGAACCTCGCCGACATTTGGAAGTACTGAAGC
CGGCCGGAGCTGCACCTACCACATCCACATGATTCTCGC-TCGATCGGTTCTGGCTCGTTGATTAATTACTGAATTGGAT
TACTTAACTTGGTGTGTGATGCTG--GTTAGTGGTTTGCTGATGCAGCATCATCTTCTTTCCGGAGGATTCTCGGG----
-TGGGATCAGGTTA----CTATCCAGACAGACAGACAGACCTCCAGGGATTAGCTAGCTATAGGCTTCCTTAATTATGTT
A---ATTAAATTAATTAGTCCTAGGTTCATATCTTGATCTGTGTGTACATATCACTACAA------C--TATTCTGATTG
TGATTAATTACTAGCAGTAGCAGCATGAGATGGAGTATACAATTAATGTGTGTAGATTAGGGGGGACGACTTCAGATCCA
TTTGTGAATCGATTAATTTGGGCGCCGTTGATGAGCCAGCCAGCTAGCGCTAC------TA-------------GCTTTG
TATGTACATGTACCACCATTGATCATTAATTGCTTGAGTTTGACATGTCACTATGTGAATGGATGCTTTGTGTTCTCTCT
GTACCGCTTTAAGCTTGTTAATTAATCGCTGGGTTACTCCTTTGTGGGCGCAACTCGACGAGACGAGAGGCACTAGTACC
AGTTCTGGTGCTGCTCATGGGG------------------------------ACCTTCCGAAATCTAGCAAGGGGAGATA
TGGG-------------TGGATCATGGTTTTGGGCCGACGGATGGGGCCACCGCGGGCTTGGTTGGATCGTCCGATTATT
CCCGGACCACGTCGTGGTCATGGCGTCCAGTTGGTGAACTC---------------------------------------
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>chr3D_3178
CTCTAAC-------------------------------------------------------------------------
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----------------------------------------------GTTCTTTCCCTCTAGCTAGGG-TTCCCTTCTCCC
GGAGGCGATCTTCCGCCTCCGTCGAGTATTCTCCTTCCCTCCTCCGATCGTTCCTTGTTTGATGGTTCGTGCTGATTAAG
GGGTGACCTCTGTATCACTTCCCAGCC-TGATCTACGACTTGGAGGCGACAAGAGAGTTAGGGTTCGTAT-AAAAGCCCG
ATCTGTTTCAACC-TCGGGCTAGGGTTCAAGAGT----TCTGCGGCGATGGGATCGAACGCCAACGAGGCGTCGGGATCA
GGCGCTGCGACAGAGGTGGAGAAGATGATGGCCGAGTTAGGCCTCAGAGAGGAGGACCTCGACGATGTTGTCTTCGACGA
GAAGAAGGCACCGCCAGAGGCTGCCAGGTGGATGGTTGTGGCTAGGGTTCATATCGCTAAACCATACAGCCAATACTGGT
TCTTCAAGAACATGAGGTCAGCATGGGATCTTGCGCATGATGTCAAGTTTCGTCCTCTCGATGATAATCTCTACACTACG
CAATTCTTTTGCCTGGGAGACTGGGAACGCGTCATGCAGGATGGACCATGGAATTTCAGAGGAAACGCTGTGATCATCGA
GCCTTATGATGGTGTCACCAAACCAACAGAGGTGAATCTTGATAATCTCAA--
>chr5A_3182
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---------------------------------------------AGTTTTTCCCCTCTCGCTAGGG-TTTTCTCCTCCC
GGAGGCGCTCTGACGCCACCGTCGAGATGTTGTCTTCCCTCCTCCGATCTACCCTCGTCTCACGATTCGGGCTGACTAAG
GGGTGATCCCTGCATCACTTCCTGGCCTTGATCATCGGCTTGGTTTCGAGACGAGAGCTAGGGTTCGCTT-CAGCGCCTG
ATCTGTTC---TTTTCGGGCTAGAGTTCAAGG-TTTCGTCTGCGGCGATGGGAGCGAACGCCCATGAGGCGTCGGGCTTG
GGTTCCGCGACAGAGATAGAAAAGATGATGGCTGAGTTAGGTCTCAGAGAGGAGGATCTCGATGATGTTGTTTTCGATGA
GAAAGCAGCGCCACCAGAGGCTACCAGGTGGATGGCTGTGGCTAGGGTTCACATAGATAAACCATACAGCCAATATTGGT
TCTTCAGGAACATGAGGTCAGCCTGGGACCTCACGCATGATGTAAAGTTCCGTCCCCTCGATGATAATCTCTACATGATG
CAATTCTTCTGCTTGGGAGATTGGGAACGGGTCATGCAGGAGGGGCCATGGAATTTCAGAGGAAACGCAGTGGTCATTGA
GCCTTATGATGGAATCACTAAGCCAACGGAGGTGAATCTAGACCATCTCAA--
>chr5A_3182
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---------------------------------------------AGTTTTTCCCCTCTCGCTAGGG-TTTTCTCCTCCC
GGAGGCGCTCTGACGCCACCGTCGAGATGTTGTCTTCCCTCCTCCGATCTACCCTCGTCTCACGATTCGGGCTGACTAAG
GGGTGATCCCTGCATCACTTCCTGGCCTTGATCATCGGCTTGGTTTCGAGACGAGAGCTAGGGTTCGCTT-CAGCGCCTG
ATCTGTTC---TTTTCGGGCTAGAGTTCAAGG-TTTCGTCTGCGGCGATGGGAGCGAACGCCCATGAGGCGTCGGGCTTG
GGTTCCGCGACAGAGATAGAAAAGATGATGGCTGAGTTAGGTCTCAGAGAGGAGGATCTCGATGATGTTGTTTTCGATGA
GAAAGCAGCGCCACCAGAGGCTACCAGGTGGATGGCTGTGGCTAGGGTTCACATAGATAAACCATACAGCCAATATTGGT
TCTTCAGGAACATGAGGTCAGCCTGGGACCTCACGCATGATGTAAAGTTCCGTCCCCTCGATGATAATCTCTACATGATG
CAATTCTTCTGCTTGGGAGATTGGGAACGGGTCATGCAGGAGGGGCCATGGAATTTCAGAGGAAACGCAGTGGTCATTGA
GCCTTATGATGGAATCACTAAGCCAACGGAGGTGAATCTAGACCATCTCAA--
>chr4D_3187
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--------------------------------------------------TTGCCCTCTAGTTAGGG-TTTTCTTCTCCC
GGAGGCGATCTATCGCCGCCGTCGAGACCTTACCTTCCCTCTTCCGATCGCTCCTCGTCTAATGTTTCGGGCTGACTTAG
GGGTGATCTCTGCATCACTTCCTGGCCTTGATCGTCGACCTGGTAGCGAGAAGAGAGCTAGGGTTCGTCCACAACGCCCG
ATCTGACTCTTTCTTCAGGCTAGGGTTCAGGTTTTTCGCTTACGGCAATGGGAGCGAACGATGATGAAGCGTGTGGTTCA
GGCGCCATGACAGAGATGGAAAAGATGATGGCAGAGTTAGGGCTCAGGGAGGAGGACCTGGACGACGTTGTTTTCGACGA
GAAGGCGGCGCCGTCGGAAGCTACCAGGTGGATGGCAGTGGCTAGGGTTCACATTGATAAACCATATAGCCAATACTGGT
TCTTCAAGAACATGAGGTCAGCCTGGGATCTTGCGCATGATGTTAAGTTCCGCCCTCTCGAGGACAACCTCTACACGATG
CAATTCTTCTGTCTAGGAGATTGGGAACGGGTCATGCAGGAAGGGCCATGGAACTTTAGGGGAAACGCAGTGGTAATTGA
GCCTTATGATGGTGTCACAAAGCCTACAAAGGTGAACCTTGACAACCTCAATA
>chr5B_3187
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--------------------------------------------------TTTCCCTCCTGCTAGGGTTTTGCTCCTCCC
GGAGGTGCTCTGTCGCCGCCGTTGAGATATTATCTTCCCTCCTCCGATCTACCCTCGTCTGATGATTCGGGCTGACTAAG
GGGTGATCCTTGCATCACTTCCCGGCCTTGATCGTCGACTTGGATTCGAGAAGAGAGCTAGGGTTCGCTT-CACCGCCCG
ATCTATTC---CGTTCGGGCTAGGGTTCAAGG-ATTCATCTGCGGCGATGGGAGCGAATGCCCATGAGGCGTCGGGCTCA
GGATCCGCGACAGAGATAGACAGGATGATGGCTGAGTTGGGTCTCAGAGAGGAGGATCTCGACGATGTTGTTTTTGATGA
TAAAGCGGCACCGCCAGAGTCTACCAGGTGGAGGGCTGTTGCTAGGGTTCATATAGATAAACCATACAGTCAATAATGGT
TCTTCAAGAACATGAGGTCAGCCTGGGACCTTGCGCATGATGTTAAGTTCCGCCCCCTCGAAGATAATCTCTACACGATG
CAATTTTTCTGCTTGGGAGATTGGGAACGTGTCATGTAGGAGGGGCCGTGGAATTTCAGAGGAAACGCTGTGGTCATAGA
GCCTTATGATGGAATTACTAAGCCAACAGAGGTGAATCTAGATCATCTCAATA
>chr6B_3188
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---------------------------------------------------TTCCCTCTTGCTAGGGTTTTGCTCCTCCC
GGAGGTGCTCTGTCGCCGCCGTTGAGATATTATCTTCCCTCCTCCGATCTACCCTCGTCTGATGATTCGGGCTGACTAAG
GGGTGATCCTTGCATCACTTCCCGGCCTTGATCGTCGGCTTGGGTTCGAGACGAGAGCTAGGGTTCGCTT-CAGCGCCCG
ATCTATTC---TTTTCGGGCTAGGGTTCAAGG-TTTCGTCTGCGGCGATGGGAGCGAATGCCCATGAGGCGTCGGGCTCA
GGATCCGCGACAGAGATAGACAGGATGATGGCTGAGTTGGGTCTCAGAGAGGAGGATCTCGACGATGTTGTTTTTGATGA
TAAAGCGGCGCCGCCAGAATCTACCAGGTGGAGGGCTGTTGCTAGGGTTCATATAGATAAACCATACAGCCAATACTGGT
TCTTCAAGAACATGAGGTCAGCCTGGGACCTTGCGCATGATGTTAAGTTCCGCCCCCTCGAAGATAATCTCTACACGATG
CAATTTTTCTGCTTGGGAGATTGGGAACGGGTCATGCAGGAGGGGCCGTGGAATTTCAGAGGAAACGCTGTGGTCATAGA
GCCTTATGATGGAATTACTAAGCCAACAGAGGTGAATCTAGATCATCTCAATA
>chr7D_3188
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---------------------------------------------------TTCCCTCTAGTTAGGG-TTTTCTTCTCCC
GGAGGCAATCTGTCGCCGCCGTCGAGACCTTACCTTCCCTCCTCTGATCGCTCCTCGTCTAACGTTTCGGGCTGACTTAG
GGGTGATCTCTGCATCACTTCCCGGCCTTGATCGTCAACCTGGTAGCGAGAAGAGAGCTAGGGTTCGTTCACAACGCCCG
ATCTGACTCTTTCTTCGGGCTAGGGTTCAGGTTTTTCGCTTACGGCAATGGGAGCAAACGCTGATGAAGCGTCTGGTTCA
GGCGCCGTGACAGAGATGGAAAAGATGATGGCAGAGTTAGGGCTCAGGGAGGAGGACCTGGACGACGTTGTTTTCGACGA
GAAGGCGGCGCCGTCGGAAGCTACCAGGTGGATGGCAGTGGCTAGGGTTCACATTGATAAACCATATAGCCAATACTGGT
TCTTCAAGAACATGAGGTCAGCCTGGGATCTTGCGCATGATGTTAAGTTCCGCCCTCTCGAGGACAACCTCTACACGATG
CAATTCTTCTGTCTAGGAGATTGGGAACGGGTCATGCAGGAAGGGCCATGGAACTTTAGGGGAAACGCAGTGGTAATTGA
GCCTTATGATGGTGTCACAAAGCCTACAGAGGTGAACCTTGACAACCTCAATA
>chr1D_3188
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---------------------------------------------------TTCCCTCTAGTTAGGG-TTTTCTTCTCCC
GGAGGCGATCTGTCGCCGCCGTCGAGACCTTACCTTCCCTCCTCTGATCGCTCCTCGTCTAACGTTTCAGGCTGACTTAG
GGGTGATCTCTGCATCACTTCCCGGCCTTGATCGTCGACCTGGTAGCGAGAAGAGAGCTAGGGTTCGTTCACAACGCCCG
ATCTGACTCTTTCTTCGGGCTAGGGTTCAGGTTTTTTGTTTACGGCAATGGGAGCGAACGCTGATGAAGCGTCTGGTTCA
GGCGCCATGACAGAGATGGAAAAGATGATGGCAGAGTTAGGGCTCAGGGAGGAGGACCTGGACGACGTTGTTTTCGACGA
GAAGGCGGCGCCGTCGGAAGCTACCAGGTGGATGGCAGTGGCTAGGGTTCACATTGATAAACCATAT-ACCAATACTGGT
TCTTCAAGAACATGAGGTCAGCCTGGGATCTTTCGCATGATGTTAAGTTCCGCCCTCTCGAGGACAACCTCTACACGATG
CAATTCTTCTGTCTAGGAGATTGGGAACGGGTCATGCAGGAAGGGCCATGGAACTTTAGGGGAAACACAGTGGTAATTGA
GCCTTATGATGGTGTCACAAAGCCTACAGAGGTGAACCTTGACAACCTCAATA
>chr7A_3199
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--------------------------------------------------------------TAGGG-TTTTCTCCTCCC
GGAGGCGCTCTGACGTCGTCGTCGAGATCTTGTCTTCCTTCCTCCGATCTACCCTCGCCTGACGATTCGGGCTGACTAAG
GGGTGATCCCTGCATCACTTCCCGGCCTTGATCGTCGGCTTGGTTTCGAGACGAGAGCTAGGGTTCGCTT-CAGCGCCCG
ATCTGTTC---TTTTCGGGCTAGAGTTCAAGG-TTTCGTCTGCGGCGATGGGAGCGAACGCCCATGAGGCGTTGGCCTCA
GGTTCCGCGACAGAGATAGAAAAGATGATGGCTGAGTTAGGTCTCAGAGAGGAGGATCTCGATGATGTTGTTTTCGATGA
GAAAGCGGCGCCACCAGAGGCTACCAGGTGGATGGCTGTGGCTAGGGTTCACATAGATAAACCATACAACCAATATTGGT
TCTTCAAGAACATGAGGTCAGCCTGGGACCTCGCGCATGATGTAAAGTTCCATCCCCTCGATGATAATCTCTACACGATG
CAATTCTTCTGCTTGGGAGATTGGGAACGGGTCATGCAGGAGGGGCCATGGAATTTCAGAGGAAACGCAGTGGTCATTGA
GCCTAATGATGGAATCACTAAGCCAACAGAGGTGAATCTAGACCATCTCAA--
>SNPs
-------------------------------------------------------S------------------------
---S---------------------S-----------------------------S------------------------
-----------S--------------------------------------------------------------------
--------------------------S---------------------------------S-------------------
-------------------------------------------S------------------------------S-----
---S-------S-----------SS-------------------------------------------------------
-----------------------------------S--SS--SS----SS------------------------------
----------S-S----------------------S------SS-----------------------------------S
SS-S--SS----------S-------------------------------------------------------------
-------SS---------------------S---------S------------------S--------------------
------S---------------------------S-S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S------------------------------------------------------S--------------
--------------------------------------------------------------SS----------------
-----------------------------S----------------------------------------------S---
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S--------S-------------------------------------------------------S--------
--------------------------------------------------------------------------------
-S---------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------SSS-----------------
--------------------------------------------------------------------------------
-----S--------------S-----------------------------------------------------------
----------------------------S------S--------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
-S------------------S--------------S-S-S----------------------------------------
-------------S--------------------------------------------------------------SSSS
S------------------S-----SS--------------------------------S--------------------
---------S-S----------S----------------------------S------S-SSSSSS--------------
-----------------------------------S------------------------------------S-------
-------------------------S-------------S-------------------SSSSSSSSSSSSSSS------
--------------------------------------------------------------------------------
--S--------------S----S-----SSSS-SS---------------------------------------S-----
----S-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------
---S--SSSSSSSSSSS--------------------------------S-----------S--------S---------
-----------------S----------------S------SSSS-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------S----------------------S-----------------------------
--------------------S--------------------------------
>forward_172
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------------------------------------------------------------------------GGATGCTC
ATCGCTTTTGGT--------------------------------------------------------------------
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-----------------------------------------------------
>reverse_1230
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-----------------------------ATAAACCAGGCGGAGGTGGA-------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------
>forward_1106
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---------------------------------------------CTCTTTCACACACGCCTCTCT--------------
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-----------------------------------------------------
>reverse_2518
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-------------------------------------TCGTCGATTGGTTCTGGCTC-----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_2516
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----------------TGCACCTACCGCATGATTCG--------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------
>reverse_3941
--------------------------------------------------------------------------------
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--------------------CGCCAACAGAGGTGAATCTAGA-----------
