>input_sequence_42830
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-------------------------------------------------------ATGGAAAGCGTCGAGCACCACGACG
AAGCCGCCACCGG-CCTCTCCCTTTCCCCTCCCCCTACGTCGGCGCCGCTCTCCCCAC----------------------
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-------------CGATATCCCCCAACTCCGCGGCGGTGGCGGC---------GCTGGCGAACGCGCGCTGGGTCCCTAC
CAGGGAGCAGATCGCGGTGTTGGAGGGGCTGTACCGCCAGGGGATGCGCACCCCCACCGCCGAGGAGATACATCAGGTGA
CGGCGAGGCTGCAGGAGCACGGCCCCATCGAGGGCAAGAACGTCTTCTATTGGTTCCAAAACC---------GGCTGCGC
CAGAAGCAGAAGCAGCAGCAGCAGCAGAGATCTGACTACTTCGCCAGGCAGATCCGCCGTCCCCAGCCGCTGCCCACGCT
CCGCAGGACCCCCGGCAAC---TCCTTCTCCCCGGTCCAGCTGCAGGCGCCGCCAGCGCCGAAC----------------
-----------------------ACTCCTGCATGCAACAGAGAAGGTACGTCCGCGC---------ATAAACCCTCTCCA
TTTATGCGCTCAGCACGC----CATTTAATTAAATCCGCTTTTGGCAATTGGCATGCA---CGTCTTGATTGATTAGCTC
CCGAATGCGTCTGTGCGTTTCTTGGC-TGGCTTTACGATTGGGGTT-----TCGTTGGAAAGGGTATGCATCTACGACTT
TCCATTTGCAACCCCCGCGGCTTTCATGCGTCCG--------------------------------------------CA
CGGTAGTTGTACCATGTGTGGTGTGTTTTGTGCTGTTCCTCTTGCTCACGATGTGCGCGCATGCACATGTAAGAAAAAAA
AAAAGAAACATCTGAAAAGAAAAATT--TACACGTATCTTAATACAAGATCTCACGAATATAACATCGACTGAGACTTGG
ATTTAGCAAAACTGTTTTCTTAACTCCTGATGATACCAAAGCAGTTGGCCGCCAGTAGCGAGCGAGAGAGTTTAGGAGTT
TCCGGCCACTGAACTCACCTGAACTGTCTTGTTCCTAACTACTCTGAAGTGGTCAGACCTCCAAAAAATGCCTCGGGCTG
CCATCCCATAATGTAGGAAGACGAAAGCAATTTTGTGGGCCCCAAAATGGCATGATGCGTGTCAGCCGATCCAGCAACGA
GTAGTGTGTATTTACCATTTTTTCAACTTGATTAAAATGAATTGAATTAATTTATATTCCTTCTGATTCGCCCATTTCAT
TGTGTTTCATCGATGCCAACTTTGTTCGTTATCAACAGAAATCGAGGAGGTGTTGGATATGGCTATGTTTGCATTGAGCG
TAATTCTATGTGATTCTGCTTCTGTTATTTTGCCTAACCTTGAGCAAACTACCGGAAAGCACACAAAGGATACCCTTAAT
CCAAAATATGCCCTAAAGTTATGGTTGTACTAATGTGTTTTCCATTGGATCCATGTTTCTTTTTCTTGCAGGGATGTACA
TGCAGCAGCCATGTTACATGACAGGGCAAGCGGCACAAGCCTCGGTGAATGCAGCCTACTACTCGCAGATGCAGCCATCG
CTAATGCACTCAAATTTAGAGACGATGGCGCATGGCAACATCCAGGCACAGGCACAAGCCGCCATGTACTTCCAGACAAC
AGCTTCAAACAACTCCAACACTCAACAACCGCGTGCGGTCCAGTTTCCTTCGACCAACAACAGCTACGGGGCTCCTGAGG
CCTACTCCCGTCGTCCCGTGCTTCTGAATCTGTTCCCACAATACCCCACCTTCGCAAATCGCGAGAGGACCCTCCACACT
GAGAGCGCCGGCTCCCCAAGGCCATCCACCTCAAGGTCGTTCTCTTTGGAGGCTGAGAGCTCGGAGGTCCCCAGCGGAGA
TGGCTCGAGATCGTTCTATGACTTCTTTGGTGAAGGCCACTGA-------------------------------------
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---------
>chr3A_1_TraesCS3A01G358100
TTGTTTTTAGCAAGAAACAGAAACCGCTTGAGCTGTCAATGGATCGATAAAGAGCACAGCTGGCCGTGCACTGTTTACAT
GCTATACTTGGAACCAAGTTATTGTC-GAGTCATATGGTACCAGAAACATCGTCGGTGTA--------------------
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-------------------------------------------------------------------------------T
TGTAGTCT------------------------------------------------------------------------
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--------------------------------------------------------------------ACATACAACTGT
GTCTGCACGGGGTCGGTATAGGTACCAGCTACTAATTTGGGTCTTTTTTA-TT--TTTTTATGAAACACACAAACAAACT
CATGTGTATTTCACAGATACAATAAACGAGAAGCA-TTTTGTGCTTTTAGGGGAGAAAATGAAAACAGAAACCGCTTAAC
CGACTGATTTTCTAGAGTGTCTGAACTAATAGATCTAGAGGGAAACACAACTGGACGTACAAAGTTTACATGCTACACTT
GTGTGGAAGTTATTTTTCAGTCAAATGGTATCGGAGAACACCGCCGGTATGGTATACCCTGGTGTACGATACAACTGTGT
---------ATTGACCAGGACACGAGTAACAACTAATATCTTCATTTTTCACTCACATTTTTTCTTCTGAAACACGCAAA
CTCACGCGTATTTCTATCTGT-TCCAAGAAACGAGAAATATGATTGCGCTTTTGGGGGAG-AAAAATGAAAACCATTGAC
CGCGTGAATTACTAAATGACCGAATAGATCCAGAGGAAGCATAACA----ACGCGCGTTTACATGCTATACTTGGAACAA
AGTTATTTC-GGTATAGGTACCAGCCCGTATGTTACTACATGTGTAGTGTTTTATCGTGATCACACACGCGGTACACGGC
AAATAGCCGGCACACGAGTCTCGCCACCCTGTCGCGCCTCTGCTCGCCCC-ATGGGCCCATCCACAGCTTTTGACCACGC
GGCGACAGCGGC-TGG-----------------------------------------------CCTCTCTCCCCCAGTCC
TCCTCACCCTCCCACGGGCCTTTAAATACCCCCAACAACCTGCCCGATCGCAAGCGCACACAAATGCAAAACCCAAGCGC
AAAGAAAACCCCTA--------------------------CTCCCCTAGCTAGCCATGGAAAGCGTCGAGCACCACGACG
AAGCCGCCACCGG-CCTCTCCCTTTCCCCTCCCCCTACGTCGGCGCCGCTCTCCCCAC----------------------
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-------------CGATATCCCCCAACTCCGCGGCGGTGGCGGC---------GCTGGCGAACGCGCGCTGGGTCCCTAC
CAGGGAGCAGATCGCGGTGTTGGAGGGGCTGTACCGCCAGGGGATGCGCACCCCCACCGCCGAGGAGATACATCAGGTGA
CGGCGAGGCTGCAGGAGCACGGCCCCATCGAGGGCAAGAACGTCTTCTATTGGTTCCAAAACC---------GGCTGCGC
CAGAAGCAGAAGCAGCAGCAGCAGCAGAGATCTGACTACTTCGCCAGGCAGATCCGCCGTCCCCAGCCGCTGCCCACGCT
CCGCAGGACCCCCGGCAAC---TCCTTCTCCCCGGTCCAGCTGCAGGCGCCGCCAGCGCCGAAC----------------
-----------------------ACTCCTGCATGCAACAGAGAAGGTACGTCCGCGC---------ATAAACCCTCTCCA
TTTATGCGCTCAGCACGC----CATTTAATTAAATCCGCTTTTGGCAATTGGCATGCA---CGTCTTGATTGATTAGCTC
CCGAATGCGTCTGTGCGTTTCTTGGC-TGGCTTTACGATTGGGGTT-----TCGTTGGAAAGGGTATGCATCTACGACTT
TCCATTTGCAACCCCCGCGGCTTTCATGCGTCCG--------------------------------------------CA
CGGTAGTTGTACCATGTGTGGTGTGTTTTGTGCTGTTCCTCTTGCTCACGATGTGCGCGCATGCACATGTAAGAAAAAAA
AAAAGAAACATCTGAAAAGAAAAATT--TACACGTATCTTAATACAAGATCTCACGAATATAACATCGACTGAGACTTGG
ATTTAGCAAAACTGTTTTCTTAACTCCTGATGATACCAAAGCAGTTGGCCGCCAGTAGCGAGCGAGAGAGTTTAGGAGTT
TCCGGCCACTGAACTCACCTGAACTGTCTTGTTCCTAACTACTCTGAAGTGGTCAGACCTCCAAAAAATGCCTCGGGCTG
CCATCCCATAATGTAGGAAGACGAAAGCAATTTTGTGGGCCCCAAAATGGCATGATGCGTGTCAGCCGATCCAGCAACGA
GTAGTGTGTATTTACCATTTTTTCAACTTGATTAAAATGAATTGAATTAATTTATATTCCTTCTGATTCGCCCATTTCAT
TGTGTTTCATCGATGCCAACTTTGTTCGTTATCAACAGAAATCGAGGAGGTGTTGGATATGGCTATGTTTGCATTGAGCG
TAATTCTATGTGATTCTGCTTCTGTTATTTTGCCTAACCTTGAGCAAACTACCGGAAAGCACACAAAGGATACCCTTAAT
CCAAAATATGCCCTAAAGTTATGGTTGTACTAATGTGTTTTCCATTGGATCCATGTTTCTTTTTCTTGCAGGGATGTACA
TGCAGCAGCCATGTTACATGACAGGGCAAGCGGCACAAGCCTCGGTGAATGCAGCCTACTACTCGCAGATGCAGCCATCG
CTAATGCACTCAAATTTAGAGACGATGGCGCATGGCAACATCCAGGCACAGGCACAAGCCGCCATGTACTTCCAGACAAC
AGCTTCAAACAACTCCAACACTCAACAACCGCGTGCGGTCCAGTTTCCTTCGACCAACAACAGCTACGGGGCTCCTGAGG
CCTACTCCCGTCGTCCCGTGCTTCTGAATCTGTTCCCACAATACCCCACCTTCGCAAATCGCGAGAGGACCCTCCACACT
GAGAGCGCCGGCTCCCCAAGGCCATCCACCTCAAGGTCGTTCTCTTTGGAGGCTGAGAGCTCGGAGGTCCCCAGCGGAGA
TGGCTCGAGATCGTTCTATGACTTCTTTGGTGAAGGCCACTGAACAAGCCACATGAATGTTGATATGCTCAACAAGAACC
TTGTCCAAATCATCTAGGGTATCTCTCGATCTCATGACCATGCGATTGGGTGGATGTACCAATTGCCCTTTTGGGGATAT
TTATTAGCATTGTTGGTTTAATTCATCAACTAGGCAGAAAATGTATTTCTTCACAAACTTGAGGCGGTTATCAGAAACAT
GTTGTTAAATTTGATTGAATTAATCTAGTTGATTTTTTCATTGCAAGGTGCATGTTTCATTTTAGTTTTAACCTAGAGAT
GGGCGTGAAACAGTTACCAAGGTTCCCAAAAGATTTTGGGTATCACCCCTTTTTATTGGAATATCTGGTTTTTTGTTTTC
TTTAATTGTCCTATTTGAAATGGATGTAATGTTTGTGTGGCTATCGATAGTGTGTTCTCACTTGAGCTAAAAATACCCAT
GGGCACACACAAATTATAACCGACCCAAACAAACACTTAGAGTAACATAGGGTAGTATATCATTTTCTTTTCTTTTGAGA
AAAAGAGGAGTACTGCC-TTTTTAGCTGAAAAGAGGAGTATCATCGAATTAGTTGTTCAAGTTCACGAAGTGTGGAACAC
ACAAATATATCTAATGTAAACTTTGTAGACTAAACAAGTATTGAGCTCAAGCCCGCGCTCCGTTTGTGCCTAATATACCA
AAGGTTTTAGGTTGTCAATAATATAAGACCAGTGACAGTTCCTTATAGAGATGAAAACAGAGCAAAAACTTGTCGTCCTT
TCA-AAAAATATGTGGAAATGTAGATAAGTTATGGAAACAGAACAAAATTTTATGGAATGGAAGTGGAAAATTTATCATG
GAAATGGAAATAGAAACGAAACAACATTTTCTGGTGGAATGCTAGCAGGAACGAAATTTCCATATATGTACATGAAGATT
TTTTTTTGT----ATAGCCCACTCCACCCCCAATCTATAAAAACTTTTGGCTCAACTCAATCATGTCACCAAGTAAGATA
ATCCTTTTC
>chr3D_1
TTGTTTTTAGCAAGAAACAGAAACCGCTTGAGCTGTCAATGGATCGATAAAGAGCACAGCTGGCCGTGCATTGTTTAGAT
GCTATACTTGGAACCAAGTTATTGTC-GAGTCATACGGTACCAGAAACATCGTCGGTGTA--------------------
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-------------------------------------------------------------------------------T
TGTAGTCT------------------------------------------------------------------------
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--------------------------------------------------------------------ACATACAACTGT
GTCTGCACGGGGTCGGTATAGGTACCAGCTACTAATTTGGGTTTTTTTTA-TTTATTTTTGTGAAACACACAAACAAACT
CATGTGTATTTCACATATACAATAAACGAGAAGCA-TCTTGTGTTTTTTGGGGAGAAAATGAAAACAGAAACTGCTTAAC
CGAGTGATTTCCTAGAGTGTCTGAACTAATAGATCTAGAGGGAA-CACAACTGGCCATACGACGTTTACATGCTACACTT
GTGACGAAGTTATTTTTCAGTCAAATGGCATCGGAGAACACCGCCGGTATGGTGTACCCTGATGTAC-ATACAACTGTGT
ATGCATGTGATCGACCAGAACATGGGTAACAACTAATATCTTTATTTTTTACTTACATTTTTTCTTCTGAAACACACAAA
CTCATGCGTATTTCTATCTAGATCCGAGAACCGAGAAATATGATTGCACTTTTGGGGAAG-AAAAATGAAAACCATTGAC
CGCGTGAATTACTAAATGGCCGAATAGATCCAGAGGAAGCATAACA----ATGCGCGTTTATATGCTATACTTGGAATAA
AGTTATTTC-GGTATAGGTACCAGCCCGTATGTTAGTACATGCGTAGTGTTTTATCGTGATCACACGCGCGGTACACGGC
AAATAGCTGGCACACGAGTCTCGCCACGCTGCCGCGCCTATGCTCGCCCC-ATGGGCCCAGCCACAGCTTTTGACCGTGT
GGCGACAGCGGCACAA-----------------------------------------------CCTCTC-CCCCTAGTCC
TCCTCACCCTCCCACGGGCCTTTAAATACCCCCAACACCCCGCCCGACGGCAAGCGCACACAGACGCAAAACCCAAGCGC
AAAGAAAACCCCTA--------------------------C-TCCCTAGCTAGCCATGGAGAGCGTCGAGCACCACGATG
AAGCCGCCACCGG-CCTCTCCCTTTCCCCTCCCCCTACGTCGGCGCCGCTCTCCCCGC----------------------
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-------------CGATATCCCCCAACTC---------GGCGGC---------GCTGGCGAACGCGCGCTGGGTCCCTAC
CAGGGAGCAGATCGCGGTGCTGGAGGGGCTGTACCGGCAGGGGATGCGCACCCCCACCGCCGAGGAGATACACCAGGTGA
CGGCGAGGCTGCAGGAGCACGGCCCCATCGAGGGCAAGAACGTCTTCTACTGGTTCCAGAACC---------GGCTGCGC
CAGAAGCAGAAGCAGCAGCAGCAGCAGAGATCCGACTACTTCGCCAGGCAGCTCCGCCGTCCCCAGCCGCTGCCGATGCT
CCGCAGGACCCCCGGCCAC---CCCTTCTCCCCGGTCCAGCTGCAGGCGCCGCCGGCGCCGAAC----------------
-----------------------ACTCCTGCATGCAACAGAGAAGGTACGTCCGCGC---------ATAAACCCTCTCCA
TTTCTGCGCCCAGCACGC----CATTTAATTAAATCTGCTTTTGGCAATTGGCATGCA---CGTCTTGATTGATTAGCTT
CCGAATGCGCCTGTGCGTTTCTTGGC-TGGCTTTACGTTTGGGGTTTTGCCTTGTTGGAAAGGGTATGCATCTACGACTT
TCCGTTTGCAGCCCCCGCGGCTTTCATGCGTCCGGTGGTCAAAGCTTTCTATAGCCGTCGTATCAGCGAGCGGCATGGCA
CGGTAGTTGTACCATATGTGGTCTGTTTTGCGCTGTTCCTCTTGCTCACGATGTGCGCGCATGCACATGTAAGAAAGAAA
AAAAGAAACATCTGAAAAGAAAAAATTGTACACGTATCTTAATACAAGATCTCACGAATATAGCATCGACTGAGACTTGG
ATTTAGCAAGACTGTTTCCTTAACTCTTGATGATATCAGAGCAGTTGGCCGCCAGTAGCGAGCGAGAGAGTTGAGGAGTT
TCCGGCCACTGAACACGCCTTAACTGTCTTGTTCCTAACTACTCCGAAGCGGTCAGACCTCTGAGAAATGCCTCGGGCTG
CCATCCCATAATGTAGGAAAACGAAAGCAATTTTGTGGGCCCCAAAATGGCATGACACGTATCAGCCGATCCAGCAGCGA
GTAGTGTGTGTTTACCATTTTTT-AACTTGATTAAAATGAATTGAATTAATCTATATTGCTTCTGATTCGCCCGTTTCAT
TGTGTTTCATCGATGTCAACTTTGTTCGTTATCAACAGAAATCGAGGAGGTGTTGGATATGGCTATGTTTGCATTGAGCG
TAATTCTATGTGATTCTGCTTCTGTTATTTTGGCTAACCTTGAGCAAACTACCGGAAAGCACACAAAGGATACCCTTAAT
CCAAAATATGCCCTAAAGTTATGGTTGTACTAATATGTTTTCCATTGGATCCATGTTTCTTTTTCTGGCAGGGATGTACA
TGCAGCAGCCATGTTACATGACAGGGCCAGCGGCACAAGCCTCGGTGAATGCAGCCTACTACTCGCAGATGCAGCCGTCG
CTAATGCACCCAAATTTAGAGACGATGGCGCATGGCAACATCCAGGCACAGGCACAAGCCGCCATGTACTTCCAGACAGC
AACTTCAAAGAACTCCAACACTCAACAACCGCGTCCATTCCAGTTCCCTTCGACCGACGGCAGCTACGAGGCTCCTGACG
CCTACTCCCGTCGTCCCGTGCTTCTGAATCTGTTCCCGCAATACCCCACCTTTGGAAATCGCGAGAGGACCCTCCACACT
GAGAGCGCCGGCTCCCCAAGGCCATCCACATCAAGGTCGTTCTCTTTGGAGGCTGAGAGCTCCGAGATCCCCAGCGGAGA
TGGCTCGAGATCGTTCTATGACTTCTTTGGTGAAGGCCACTGAACAAGCCACATGAATGTTGATATGCTCGACAAGAACC
TTGTCCAAATCATCTAGGGTATCTCTCGATCTCATGACCATGCGATTGAGTGGATGTACCAATTGCCCTTTTGGGGATAT
TTATTAGCATTGTTGGTTTAATTCGTCAACTAGGCAGAAAATGTATTTCTTCACAAACTTGAGGCAGGCATCAGAAACAT
GTTGTTAAATTTTATTGAATTAATCCAGTTGATTTTTTTATTGCAAGGTGCATGTTCCATTTTAGTTTTAACCTAGACAT
GGGCCTGAAACGGTTA-CAAGGTTCCCAAAAGATTATGGGTATCACCCC-TTTTATTGGAATATCTGGTTCTTTGTTTTC
TTTAATTGTCTTATTTGAAATGGATGTAATGTTTGTGTGGCTATCGATACTGTGTTCGCACTTGAGCTAAAAATACCCAT
GGGTACACACAAATTATAACCGACCCAAACAAACACTTAGAGTAACATAGGGTAGTATATCATTTTCTTTTCTTTTGAGA
AAAAGAGGAGTATTGCCTTTTTTAGCTGAAAAGAGGAGTATCATCGAATTAGTTGTTTAAGTTCACGAAGTGTGGAACAC
GCAAATATATCTTATGTAAACTTTGTAGACTAAACAAGTATTGAGCTCT----CGCGCTCCGGTTGTGCCTAATATACCA
AAGGTTTTAGATTGTTAGTAATATAAGACCAGTGACAGTTCCTTATGGAGATGAAAACAGAGCAAAAACTTGCCGTCCTT
TAA-AAAA--ATGTGGAAATGTAGATAAGTTATGGAAACAGAACAAAATTTTATGGAATGGAAGGGGAAAATTTATCATG
GAAACGAAAATAGAAACGAAAAAACATTTTCTGGTGGAATGCTAGCAGCAACGAAATTTCCATATTTGTACATGAAGATT
TTTTTTTGTTTGTATAGCTCACTCCA-CCCCAATCTATAAAAACTTTTGGCTCAACTCAATCATGTCACCAAGTAAGATA
ATCCTTCTC
>chr3D_1
TTGTTTTTAGCAAGAAACAGAAACCGCTTGAGCTATCAATGGATCGATAAAGAGCACAGCTGGCCGTGCACTGTTTACAT
GCTATACTTGGAACCAAGTTATTGTC-GAGTCATATGGTACCAGAAACATCGTCGGTGTA--------------------
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-------------------------------------------------------------------------------T
TGTAGTCT------------------------------------------------------------------------
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--------------------------------------------------------------------ACATACAACTGT
GTCTGCACGGGGTCGGTATTGGTACCAGCTACTAATTTGGTTTTTTTTTG-TT--TTTTTATGAAACACACAAACAAACT
CATGTGTATTCCATGGATACAATAAACGAGAAGCA-TTTTGTGCTTTTAGGGGAGAAAATGAAAATAGAAACCACTTAAC
TGAGTGATTTCCTAGAGTGTCTGAAGTAATAGATCTAGAGGGAA-CACAACTGGCCATATGCCGTTTACATGCTACACTT
GTGAAGAAGTTATTTTTCAGTCAAATGGTATCGGAGAACATCGCCGGTATGGTGTACCCTGATGTAC-ATACAACTGTGT
ATGCATGTGATCGACTAGGACACGGGTAACAACTAATATCTTCATTTTTTACTTACATTTTATCTTCTAAAACACACAAA
CTCACGCGTATTTCTATCTAGATCCAAGAACCGAGAAATATGATTGCGCTTTTGGGGGAG-AAAAATGAAAACCATTGAC
CGCGTGAATTACTAAATGGCCGAATAGATCTAGACGAATCATAACA----ACGCGCGTTTACATGCTATACTCGGAACAA
AGTTATTTC-GGTATAGGTACCAGCCCGTATGTTACTACATGTGTAGTGTTTTATCGTGATCACACGCGCGGTACACGGC
AAATAGCTGGCACACGAGTCTCGCCACGCTGCCGCGCCTCTGCTCGCCCC-ACGGGCCCATCCACAGCTTTTGACCGCGT
GGCGACAGCGGCACAA-----------------------------------------------CCTCTCTCCCCCAGTCC
TCCTCACCTTCCCACGGGCCTTTAAATACCCCCAACACCACGCCCGACGGCAAGCGCACACAGACGCAAAACCCAAGCGC
AAAGAAAATCCCTA--------------------------CTTCCCTAGCTAGCCATGGAGAGCGTCGAGCACCACGACG
AAGCCGCCACCGG-CCTCTCCCTTTCCCCTCCCCCTACGTCGGCGCCGCTCTCCCCAC----------------------
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-------------TGATATCCCCCAACTC---------CGCGGCGGTGGCGGCGCTAGCGAACGCGTGTTGGGTGCCTAC
CAGGGAGCAGATCACGGTGCTGGAGGGGCTGTACCGGCAGGGGATGCGCACCCCCACCGCCGAGGAGATACACCAGGTGA
CGGCGAGGCTGCAAGAGCACGGCCCCATCGAGGGCAAGAACGTCTTCTACTGGTTCCAGAACC---------GGCTGCGC
CAGAAGCAGAAGCAGCAGCAGCA---GAGATCCGACTACTTCGCCAGGCAGCTCCGCCGTCCCCAGCCGCTGCCGACGCT
CCGCAGGACCCCCGGCAAC---CCCTTCTCCCCGGTCCAGCTGCAGGCGCCGCCGGCGCCGAAC----------------
-----------------------CCTCCTGCATGCAACAGAGAAGGTACGTCCGCGC---------ATAAACCCTCTCCA
TCTCTGCGCTCAGCCCGC----CATTTAATTAAATCTGCTTTTGGCAATTGGCATGCA---TGTCTTGATTGATTAGCTC
CCGGATGCGCCTGTGCGTTTCTTTGGTTGGCTTTAC-TTTGGGGTT-----TTGTTGGAAAGGGTATACATCTACGACTT
TCCATTGCAATCCCC-ACGGCTTTCATGCGTCTG--------------------------------------------C-
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---------
>chr3D_1
TTGTTTTTAGCAAGAAACAGAAACTGCCTGAGCTGCCAATGGATCGATAAAGAGCATAGCTGGCCGTGCACCGTTTACAT
ACTATACTTGGAACCAAGTTATTGTC-GAGTCGTATAGTACCAGAAACATTATCGGTGTA--------------------
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-------------------------------------------------------------------------------T
-------T------------------------------------------------------------------------
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--------------------------------------------------------------------ACATACCGCTGT
GTCTGCACGGGGTCAGTATAG-TACCGGCTACCAATTTTGGGTTTCTTCATTT--TTTTTATGAAACACACAAACAAACT
CATGTGTATTTCAAAGATACAAGAAACGAGAAGCATTTTTGTGCTTTTAGGGGAGAAAATAAAAACAGAAACCGCTTGAC
TGAGTGATTTCCCAGACTGTCTGAATTAATAGATCTAGAGGGAG-CACAACTGCCCATACGATGTTTACATGCTATACTT
GTGACGAAGTTATTTTTCAGTCAAATGCTATCGAAGAATACCGCCATTATGGTGTATCCTGGTGTAC-ATACAACTGTGT
ATGCACGTGATCGATCAGGACACGAGTAACAACCAATAAGTTCATTTTTTTA--ATATTTTTTCTTCTGAAACACACAAA
CTTATGTGTATTTCTATCTAGATCAAACAACTGAGAAATATGATTGCTCTTTTGGGGAAG-AAAAACAAAAACCGTTGAC
CGCGTGAATTACTAAATGGCTGAATAGATCCAGAGGAAGCATAACTGGCCATGTGCGTTTACATGCTATACTTGGTACAA
AGTTATTTGTGGTATAGGTA--AGCCCGTATGTTACTACATGTGTAGTGTCTTATCGTGATCACATCCGCGGTACATGGT
AAATAGTTGGCACACGAGGCTCGCCACCCTGCCGCGCCTTTGCTCGCCCC-ATCGGCCCCTTCATAGCTATTGACCGCGT
GGCGACACGGCCAGCCCGGTGCCGTTCAACGTGGCGGCTCCCGTGTGCACGCGCTCCGCGCCCCCTCTCCCCTCCGG---
TCCTCACCCTCCCACGCACCTTTAAATACCCCCAACACCCCGCTCGACCGTAACCACACACAAACGCAAAACCCAAGCGC
AAAGAAAACCCATA--------------------------CTTTCCTAGCTAGCCATGGAGAGTGTCGAGCACCAAGACG
AAGCCACCACCCGCCCTATCCCTTTCCCCTTCCTATACGTCGGCCCCGCTCTCCCCACCGATATCCCCCAACTCCATGAC
AGTGGCGGCGCTGGCAAACATGAGATGGGTGCCTATCAGGGAGCAGATCGCGGTGCTAGAGGGGCTGTACCGCCAAGATG
ATGTGTTCTAAACCCTAAGGCCGGTAATTGTGCCTCTACGGACTAAATCCCTCAGCTTATATAGGTACCGGAGGTATCTA
GGATTACATATGGTCGGTTGCCAATTAGGAATAAATACGCCGACTGTTAGAGTTGTCCTTGAAGTATACACCAAGTCTTC
GGTGGTGTCCATCTGGATCATGCCAGAATTCATAGCTTCTAGTCGTTCCTTGCGGAGTTCGACGGGTCGTAAGTTCGCCC
ATAGACTGAGGGTCGTATAGATCGGTACCCCCTAGTTCAGGACACCGTCATCAATCATCGTACTTTTCAATGAAAAGTAA
CGACGTTCCAATACACGGGAAACGTTGATCTTGTATATCTGTGACGTTTTCTAACTAGTGAAATCGGCTATTACTTTCAG
CCACGGAATCTTCTTGTGCACCCGACAATAGCAGCGTTCGGTTGTAAAAAACGCTGCAAGTACTTGGAGATTAGCGGCGT
TCCAAGTTTTCCCACATGCAGTAGTAATTAGCCGAAGTAGCCGCGGCGTCCGTATTTCCCGAAACGCATCAGATAGGAAA
CTCCTATAAGTAGTTTTTCTACAGAAACACTAACGTTTACATGTGTGGGCGTTTGCATCTCGTCCACATACATGGATCAA
CGTAGGTTTGAATTTGTACGAATCTTTGCATGTTTTTGCTGCCACATAGAATTGGGCTGGTGTGTGGGCATTCATCTGGT
CGCCCACACGTCCGTTTTCACACGCGGAGGTGCTGATGTGTGGATGTTTAGCAGCTCGCCCACACACCAGTTTTCAACGC
ACGCAGAGGGGCTGGTGTGTGGGCGTTTATCAGTTCACCCACGCACCCGTCTCCTCTCCCACACCCAAAGCTATCAGTTG
CCATGTGTTTTGCAGGGTACATGGCAACTGCCCTAGTATGCTTGTAAGCATATGGCAACTCTCTCTTTACCCGAACATGT
CATTTTTTCATGTCTTTTTGTAGTGCTACATGACAACTACCTAGTGTTTAGTAAATTGCAACTTCTAAAGATACCACCGC
GCCCACACGCCCGTCTCCTCTCCCACACCCAAAGCTGTCAGTTGTCATGTGTTTTTGCAGGGTACATGGCAACTGCCCCT
AATGTGCTTGTAAGCATATGGAAACTCTCTCTTTACCCGAACATGTTATTTTGCCATGTCTTGTTGTAGTTCTACATGGC
AACTGCCTAGTGTTATTAGATGACAACTCCTAAAGTTTTCAAATCATGGCAATTGTAGTAGACCAGACCACACATGGCAA
CAGCTGCGGTTGTCAAAAATGGCATCTGGCACTTGACCTGAGATGGCAACTGCAGTTGAGCAACCATGGCATTTGTAGTT
GTCCGACGTGGCAACTGTAGTTCAGCAACATGGCAACTGCAGTTAAACAAACATGGAAGAGGGTCAGGACCATGGCAACT
GCGGGGACGTGTGGTGACTGTCACGCGGGGCGTGCAGGACCATGAGGTAGGAGGCCTGACGTACGAGCGTGTGGGCGTTA
TCTATATTGCCTACACACAGGCATGTGGGAGGGACCATGAGGCAAAAAAAGAGGCGTGTGGGCATTACTTGTTTTGCCCA
CACGTAGGCGTGTGGGTTGGTTCTCTTAAACACCACACAAAACGTGTGGCCAGACCCCTTAACGCCCACACGTGACATGT
ATATGTCCCCTTCTCAACCTTATATATTGGTCTAACTCACACTCAATTAGCAATGTAGGACTAAAGTTTCACACCTCTTA
TCGTACATGAATGGGCCAAGTGAGCCTCTAATTTATCCTAGGAATTATATGATTTATTTAGTGGGCCTATTCCATGTAAT
TCCAACATTTTCTACACCCGCAACATCGAGTTCTAGACTCCTTGACTCTAGTGTAAGCATGGCCCTTGTCATCAAGAACC
CAACCTTTACTCTGAATCAGGTGCCAAAAGTTTGTTGCAGACGCAATTTATGTTTAGCTTACGGAAATGAAAACGGTAGC
AATGGTATAGTTTTATTTCCAAATAAAAAGAAATGTGATTAACCTGACTTTGTTTTTAGTAAGAAGCATACACTGTTTGA
GTTGTCGATGGATCCACAAAAAGCACGGATGACCGCGCACCATGTACATGGTACACTTGGCACCAAGTTATTGTCGAGTT
CAATGATACCATAGACAGCCAAATAGATCCGAAGGGAGCACAATAGACCATGCGCTGTTTACATGCTTTACTTAGTATGA
AGTATTTTCTAGTCAAATAGTATCAGAGAACACCGTTGGTGTATCTTGGTGTAGATACAACTCTATATGCAAGTGATTGG
TAAGGACGTGATATAGGTAGGAACTAGTATGTTGCTTTTCTTCTATATATTTTTCTTTCCAAAACATACAAACTAGTGCA
TATTTCCATGTAGATCCAACAACTGAATAACATGATTCAACTTTTAGGGGAGAAAAATACAGAAAATGTTTGACCGTGTG
AGTCACTATTTGACCGCATGAGTCACTAGATGGGCGAATAGAACCAGAGGGAGCACAAATGGCCATGCGCTATTTACATG
CTATACTAGGTATAAAGATAATTTTCCATATTAATATGACCTTGTACGCTACCGTATGTGCAATACCTTATTGTTATCAT
ACAAGCGCGGTGCACGACACGTAGCTGGCACACGAGTTACGCCACCCTGCGGTGCTTCTTTGACTTATGGTAGCTGACTT
TATAGTGGCTAAGATATGGGCCCACGAACAAACTGGCCCACTTGTCACTAACCGAGAGTCACTTGATGTACGTCAATACA
ATCTGAGCCCCTCTTCACCTGCCGACTCCACGCCTTTTAACCTCGTGGCAACACGGCCCGCCCGGTGCCATTCAGTGCCC
GTGTCTACGCATATTTCTGTATAGATCTAACAACTAAGGAATATGACCCCACTTTCAGGGAAGAAAACACAGAAACCGTT
TGACAGCGTGAGTCACTAGATGGGCGAATAGATTGAGAGGGAGCACAACAGGCTATGTGTCTTTTACGTGCTATAATTTG
TAGAAAGTTAATTTTCCGTAATGATACCAGCTTGTACGTTACTATATGTGAAGTCTTATTGTTATCACACAAACCCGGTA
CGCGACAGACTTCTGTTAGCTGACTTTCAATGGCTGACATATGGATCCACAAACATACTGGCCCACTTGTCACTGCCCAG
AGTCACTTGATGTACGTCAAGTCAATTTGAGCCCCTCTCCGGCCATCCCTCGTCACCTTTTGATCGCGCGGCAGCACGGC
CAGCCCGGTGCCGTTCGGCGCCTGAGTGCACGCGCTCCACGCCCCTTCTCTCCTCCAAACCCTTACCCTCCAAGCACCTT
TAAAACCCCCAGCACCCCTCCCGACTGCAAGCACACACAATCGCAAAGGCTAGCCAAGCGCAAAGAAGATCCATATACAT
CCTCCCTAGCTAGCCATGGAGAGCGTTGGCCACCACGACGAAGCCGCCACCCGCCTGTCCCTTTCCCCTCCCCGCCGGCA
CCGCTCTCCCTGACGCCATCGCCCAACTC---------GGCGGC---------GCTGGTGAACGCGCACTGGGTGCCGAC
CAGGGAGCAGCTCGCCGTGCTGGAGGGGCTGTACCGCCAGGGGATGCGCACCCCCACCGCCGAGGAGATACATCAGGTGA
CGGCGAGGCTGCAGGAGCACGGGCCCATCGAGGGTAGGAACGTGTTCCACTGGTTCCAGAACCAGCACGTCCGACTGCGC
CAGAGGGAGAAGCAGCAG---C------GGTCCGACTACTTCGCCAGGCAGTTTCGCCGTCCCCAGCCGCTACCCGTGCT
CCACAGCCCCTCTGGCCAC---CCCTTCTCCCCGGTCTAGCTGCAGGCGCCGCCGGCGCCGAAC----------------
-----------------------ACTCCTGCATGCAATGGAGAAGGTACGCCCGGAC---------ACGAACG--CTCCA
TCTCCGCCTTCGACACGC----CATTCAATTAAATCTACTTTTGGCAATTGGCATGTA---CGTC----TTGATTAGCTT
ACAAATGCGCCTGTGCGCTTCCTAGCCTAGCTTTATGTTTGGGTTT-----TAGCTGGAAGGGATATGCATCTACGACTT
TCCATTGCAACCCAC-ACGGCTTTCATGCGTCTG--------------------------------------------C-
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>chr3D_1
TTGTTTTTGGCAAGAAACAGAAACCGGTTGAGCTGTCAATGGATCGATAAAGAGCGCAGCTGGTCGTGCACCGTTTACAG
GCTATACTTGGAGCCAAGTTATTGTC-GAGTCATATGGTACCAGAAACATTGTCGGTGTA--------------------
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-------------------------------------------------------------------------------T
-------TGTAGTCTACATACAAATGTATCTGCATGGGGTCAGTATCTCTATTGCCATGAGTAAGACACTAAAAGCAACA
CCTGGAAGTAGGGATACGAATACATATGAAACATATGATGAAGAAGCGCCATTAGACAACCACGTGAACCCCCGCCCCCT
AAAGACATTACCGTCTCTCACCCATGGATGCTCTCGAGGTAGACGGTTCCGGAGGTATGCTCTTTCTCATGGTGCATGTC
GAGAAGCATGATGGGAATGATCTAGAGGCGGTGCAAACTCTAGAATGTAACGGGCTATTCTGTGTGGGTGTATTCGTCTA
GGATCGATCTTAATATAGACTTTAGATGATGATAACTTAGTTTCCTCCATTCTAACTTCTATCATGCTAAAAAAAGATAA
ACACGCATAGGTCCCAGCATGGCTCGACTCATTCACGAAACATGATGCCAATGCTTGCACGAGGCAAGCCGAGCGTCAGA
GGTGGAGCGTGTGCATGTGCCCCTTTGTCGACTTCCTAGTGATGTATAGAAGATGAAACTTTTTATATTGGTCTAACTCA
CTCTCCACTAAGGGTGTGGGACTAAAGTTTCACACCTCGTGTCACGCATGAATGGGACAATTGGGTCTCGATGATTTATG
CTAGAAATTATATGATTTTTTTTATGGGCCTAGCCCATATAATTCCCATATTTTCTACATCCGCAAGATGGAGTTCTATA
CTCCTTTTTTCTAATGTTACAGGGTCCTCATTATCAAAATCTCTCAATCATGCACCCAGGATTCGCTGTCAATGCAATTT
ATGTTACGCTTTTGGAAATGGACATGGTAACAATGGTAAGGTTTTATTTCAAAACAAAAAGGAATGTGATTAATTTGATT
TTGTTTTTGGCAAGAAACAGAAACCGGTTGAGCTGTCAATGGATCGATAAAGAGCGCAGCTGGTCGTGCACCGTTTACAG
GCTATACTTGGAGCCAAGTTATTGTCGAGTCATATGGTACCAGAAACATTGTCGGTGTATTGTAGTCTACATACAAATGT
ATCTGCATGGGGTCAGTATAGCTACGAGCAACTAATTTGGGTTTTCTTCATTT--TTTTAATGAAACACACAAACAAACT
CATGCGTATTTCACAGATACGAGAAATGAGAAACATTTTTGTGCTTTTAGGGGAGAAAATAAAAGCAGAAACCGCTTGAC
CGAGTG--------------------------------------------------------------------------
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>chr3B_1
TTGTTTTTAGCAAGAAACAGAAACCGCTTGAGTTGTCAATGGGTCGATAAAGAGCACAGCTGGTCGTGCACCGTTTACAT
GCTATACTTGGAACCAAGTTATTGTCTGAGTCATATGGCACCAG-AACATCGTCGATGCA--------------------
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-------------------------------------------------------------------------------T
TGTAGTCT------------------------------------------------------------------------
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--------------------------------------------------------------------ACATACAACTGT
GTCTGCACGGGGTCGGTATAGGTACCAGCTACTAATTTTGATTTTCTTCA-TT--TTTTTATAAAACACACAAACAAACT
CATGCATATTTCACAGTCACAAGAAACGAGAAGCACTTTTGTGCTTTTAGGGGAGAAAATAAAAACAGAAACCGCTTAAC
GCAGTGATTTCTT--AGTGTCTGAACTAATAGATCTAGAGGGAG-CACAACTGGCGATACGACGTTTACATGCTATACTT
GTGACGAAGTTATTTTTCAGTCAAATGGTATCAGAGAACACCGC-GGTTTGGTATATCCTGATGTAC-ATACAACTGTGT
GTGCACGTGATTGACCAGGACACGGGTAACAACTAATATCTTCACTTTTCACTTACATTTTTTCTTCTGAAACACATAAA
CTCACACGTATTTCTATCTAAATCCAACAACTTAGAAATATGATTGCACTTTTGGAGGAGAAAAAATGAAAACCATTGAC
CGCGTGAATTACTAAATTGCCAAATAGATCCCGAGGAAGCATAACA----ACGCGCGTTTACATGCTATACTTGGAACAA
AGTTATTTC-GGTATATGTACCAGCCCGTATGTTACTACATGTGTAGTGTCTTATCGTGATCACACGCGCGGTACACGGC
AAATAGCTGGCACACGAGTCTTGGCACCCTGCCGAGCCTCTGCTCGCCCCCATCGGCCCATCCACAGCTTTTGACCGCGC
AGCGACAGCGGC-TAGTCT---------------------------------------------CTCCCCTCTCCAG---
TCGTCGCCCTCCCACGCGCCTATAAA-ACCCCCAACACCCCTCCCGACTCCAAGCGCACACAAACGCAAAACCCAAGCGC
TAAGAAAACCCCTA--------------------------CTTTCCTAGCTAGCCATGAAGAGCGTCGAGCACCACGACG
AAGCCGCCACCGG-CCTCTCCCTTTCCCCTCCCCCTACGTCGGCGCCGCTCTCCCCAC----------------------
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-------------CGATATCCTCCAACTCCGCGGCGGTGGCGGC---------GCTGGCAAATGCGCGCTGGGTCCCTAC
CAGGGAGCAGATCGCGGTGCTGGAGGGGCTGTACCGCCAGGGGATGCGCACCCCCACCGCCGAGGAGGTACATCAGGTGA
CGGCGAGGCTGCAGGAGCACGGCCCCATCGAGGGCAAGAACGTCTTCTACTGGTTCCAGAACC---------GGCTGCGC
CAGAAGCAGAAGCAGCAA---CA---GAGATCCGACTACTTCGCCAGGCAGCTCCGCCGTCCCCAGCCGCTGCCCACGCT
CCGCAGGACCCCCGGCCAC---TCCTTCTCCCCGGTCCAGCTGCAGGCGCCGCCGGCGCCGAAC----------------
-----------------------ACTCCTGCATGCAACAGAGAAGGTACGTCCGCGC---------ACAAACCCTCTCCA
TTTCAGCGCTCAGCACGC----CATTTAATTAAATCCGCTTTTGGCAATTGGCATGCA---CGTCTTGATTGATTAGCTT
CCGAATGCGCCTGTGCGTTTCTTGGC-TGGCTTTACGTTTGGGGTT-----TTGTTGGAAAGGGTATGCATCTACGACTT
TCCGTTTGCAGCCCCCGCGGCTTTCATGCGTCCGGTGGTCAAAGCTTTCTATAGCCGTCGTTTCAGCGAGCGGCATGGCA
CGGTAGTTGTACCATCTGTGGTCTGGTTTCCGCTGTTCCTCTTGCTCACGATGTGCGCGCATGCACATCTAAAAAGAAAA
AAAAGAAACATCTGAATTTTTTT-TT--AACACGTATCTTAATACAAGATCTCACAAATATAGCATCGACTGAGACTTGG
ATTTAGCAAGACTGTTTCCTTAAGTCCTGATGATACCAGAGCAGTTGGCCGCCAGCAGCGAGCGAGAGAGTTGAGGAGTT
TCGGGCCACTGAACATGCCCTAATTGTCTTGTTCCTAGCTACTCCAAAGCGGCCAGACCTCTGAGAAATGCCTCGGCCTG
CCATCCCATAATCTAGGAGGACGAAATCAATTTTGTGGGGCCCAAGATGGCATGACGCATGTCTGCCGATCCAGCAGCGA
GTAGTGTTTGTTTACCGTTTTTT-AACTTGATTAAAATGAAATGAATTAATCTATATTGCTTCTTATTCGCCCATTTCAT
TGTGTTT-ATCGATGCCAACATTGTTCGTTATCAACATAAATCAAGGAGGTGTTGGATCTGGCTATGTTTGCATTGAGCG
TAAT-CTATGTGATTCTGCTTCCGATATTTTGCTTAACCTTGAGCAAACTACCGAAAAGCACACAAAGGATACCCTTAAT
CCAAAATATGCCCTAAAGTTATGGTTGTGCTAATATGTTTTCCATTGGGTCCATGTTTCTTTTTCTTGTAGGGATGTACA
TGCAGCAACCATGTTACATGACAGGGCCAGCAGCACAAGCCTCGGCGAATGCATCCTACTACTCGCAGATGCAGCCGTCG
CTAACGAACCCAAATGTAGGGACTATGGCGCATGGCAACATCCAGGCACAGGCACAGGCCACCATGTACTTCCAGACAGC
AGCTTCGAACAACTCCAACACTCAACAACCGCATGCGGTCCAGTTCCCTTCAACCGACGGCAGCTACGGGGCTCCTGACG
CCTACTCCCGTCGTCCCGTGCTTCTGAATCTGTTCCCGCAATACCCCACCTTCGCGAATCGCGAGAAGACCCGCCACACT
GAGAGCGCCGGCTCCCCAAGGCCATCCACCTCAAGGTCGTTCTCTTGGGAGTCTGAGAGCTCTGAGATCCCCAGCGGAGA
TGGCTCGAGATCGTTCTATGACTTCTTTGGTGAAGGTCACTGAACAAGCCACATGAAAGTTGATATGCTCGACAAGAACC
TTGTCCAAATCATCTACGGTATCTCTCGATCTCATGACCATGCGATTGAGTGGATGTACCAATTGCCCTTTTGGGGATAT
TTATTAGCATTGTTGGTTTAATTCGTCAACTAGGCAGAAAATGTATTTCTTCACAAACTTGAGGCGGGCATCAGAAACAT
GTTGTTAAATTTCATTGAATTAATCCAGTTGATTTTTTTATTGCAAGGTGCATGTTCCATTTTAGTTTTAACCTAGACAT
GGGCGTGAAACGGTTA-CAAGGTTCCCGAAAGATTTCGGGTATCACCCCTTTTTATTGAAATATTTGGTTCTTTGTTTTA
TTTAATTGTCCTATTTGAAATGGATGTAATGTTTGTGTGGCTATCGATATTGTGTTCTCACTTGAGCTAAAAATACCCAT
GGGCACACACAAATTATAACCGACCCAAA-AAATACTTAGAGTAACATAGGGTAGTATATCATTTTCTTTTCTTTTGAGA
AAAAGAGGAGTGTTGCATTTTTTAGCTGAAAAGAGGAGTATCATCGCATTAGTTGTTTAAGTTCACGAAGTGTAGAATGC
GCAAATGTATCTTATGTAAACTTTGTATACTAAACAACTACTGAGCTCAAGCTCAAACTCCGGTTGTGCCTAATATACCC
AAGGTTTTAGATTGTTAGTAATATAAGACCAGTGGCAGTTCCTTATAGAGATGAAAACAGAGCAAAAACTTGCCGTCCTT
TTAGAAAA--ATGTGGAAATGTAGATAAGTTATGGAAACAGAACAAAATTTTATGGAATGGAAGTGAAAAATTTATCATG
GAAATGGAAATAGAAACGAAACAACATTTTCTGGTGAAATGCTAGCAGGAACGAAATTTCCATATCTGTACATGAAGATT
TTTTTTTGT----ATAGCCCACTCCA-CCCCCAATCTAT-AAACTTTTGGCTCAACTCAATCATGTCACCAAGTAAGATA
ATCCTTCTC
>chr3B_1
TTGTTTTTGGCAAGAAACAGAAACCGGTTGAGCTGT-AATGGATCGATAAAGAGCATAGCTGGTCGTGCACCGTTTACAA
GCTATACTTGGAACCATGTTATTGTC-GAGTCATATGGTACCAGAAACATTGTCGGTGTA--------------------
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-------------------------------------------------------------------------------T
TGTAGTCT------------------------------------------------------------------------
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--------------------------------------------------------------------ACATACAACTAT
GTATGCACGGGGTCAGTATAGCTATGAGCTACAAATTTGGGTTTGCTTTA--T--TATTAATTAAACACACAAACAAACT
CATGCATATTTCACAGATACAAGAAATGAGAAACATTTTTGTGATTTTAGGGGAGAAAATAAAAATAGAAACCGCTTGAT
CGAGTGTAGACTGCCA-------AATTATTAGATCTAGAGAGAG-CACAACTCGCCATATGACGTTTACATGT-------
-TGACGAAGTTATTTTTAAGTCAAACGGTATAGGAGAACACCACCGGTAAGGTTGATCCTGGTGTAA-ATACTACTGTGT
G---ATGTGATCCACCAAGACATGGGTAACAACTAATATGTTCAGTTTTTATTTACATTTTTTCTTTTGAAACACA-AAA
CTCACATGTATTTCTATCTAGATCCAACAACTGAGAAATATGATTGTGATTTTGGGGGAGAAAAAATGAAAACCGTTGAC
TGCGTGAATTACTAAATGGCTGAATAGATCCAAAGGAGGCATAACTGGCCATGTGTGTTTACATGCTATATTTTGTACAA
AGTTATATCTGGTATAGGTACCAACCTTTATGTTACTACATGTGTAGTGTCTTATCGTGATCACATGCGCGGT-------
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---------
>chr3A_5
----TTTTAGCAAGAAACAGAAACCGCTTGAGCTGTCAATGGACCGACAAAGAGCACAGCTGGCCGTGCACCGTTTACAC
GCTATACTTGGAACCAAGTTATTGTC-GAGTCATATGGTACCAAAAACATTGTCGTTGTATCTCTACTCCTAATGGAGCA
GTTGGTAGTCTCGCTTCCAGGTTTTTTTTCGTCCTACCACTTTCGTTCGGTTTTTTTCCGTAGGTTAACCGTCGTAGATT
TTTTTCGATGATGGTTTCTTATTCACCGGTTTATTTACCCCTCAGCTCTTTCCTTGCAAATCAGGACTTTCCAAACGTGC
ACGCAATCACGGATCTAAATTTACTAACTTATCCAAATCAACCGATACCTTCCATTATTGCAAATTTCTTTAGGAAACAA
ATAATAGATTTTAAGGAAACAAATAAAAGATTTTAAAGACACATCATACTTTATTAATAATCACTAAAAATCAAATCTAA
ATTAATTAACCTTACCTTAAATCACTCAATCACTTTAATTAGAAAACATTTTCTTTCCTAACTGCACCTCGCTTAGTGTG
CACATAACAATCCGAAGTAATTAGAGTCACATGATTGAATCCATTTATTTAGAGCGACATGATTGCGTTCCGGGATGGAG
GCCATGATTTCGTCGAGGTCGTTGCTGCCTCCTACACTCAGGGTGTGTCGCCGAGATCGAGGCGAGCATGAGGAGTTGTG
GCCACCGCCATGGTCACCTCATCGCAGGGGATGGAGCACGCCGTCGGCCTACAGCTTGTGGAGATCAGCACTTTCCAAAC
GTGCACGCAATCACGGATTTAAATTTACTAACTTATCCAAATCAACCGATATCTTCCATTATTGCAAATTTCTTTAGGAA
ACAAATAATATATTTTAAGGAAACAAATAAAAGATTTTAAAGACGCATCGTACTTTACTAACAATCACTAAAAATCAAAT
CTAAATTAATTAACCTTACCTTAAATCACTCAATCACTTTAATTAGAGAACATTTTCTTTCCTAACTGCACCCCGCTTAG
TGTGCACATAACAATCCGAAGTAATTAGAGTCACATGATTGAATCCATTTATTTAGAGCGACATGATTGCGTTCCGGGAT
GGAGGCCATGATTTCGTCGAGGTTGTTGCTGCCTCCTACACTCAGGGTGTGTCGTCAAGATCGAGGCGAGCATGAGGAGC
TGTGGCCACCGCCATGGTCACCCCATCGCAGGGGATGGAGCACGCCGTCGGCCTACAGCTTGTGGAGATCACTGTTGCTC
TTCAGGTCGCGTGGTGACCGGATCTTGCCGATGTGTCCCTCCCCGACGACCTCCTCTTCGCCTGGTTGGCCGGCATGGAT
CTCGCCACTACTGCCCTCAACTTCTCTGCCTCGAGCTCGACGGTCAGCCACCATGGATCCCCCAGCAGGAGGGTCACGTG
AACCAGCCGTCCTCCCATGCTGCAGCGGCGAGAAGGTGACATGGCTCTCCGTACACGAAGAGTGGAGTGTGGAGTTCGGT
CAAGTACTTATATACTTGGCCTCTACTGCTGATCCATGTACATGGAGAAGAACAGACAACCGCTCATTCATGCTTCGTTC
CACTCCTTTGCGCTACATTACTGGAGGTGACATTTTCCTATCTCTCTATGTTGTAACAAGCCTGTTGCCTGCATAGTTAA
TGGATTTTTTATTTAAATTTATCGCTGCTTAGTGCTTTGTTGCAATTGTTCACGCAAGATTCTTATATATAATCTGAGCG
TATGTAGGCATACTTAGCTTTGCTATTCCATTTTTTTGGCGCATAGAAATAAGAGTATTGTCCAGGTTAGGTATTCAATT
GAGTATGGTATTTGGATTGCTATCAGAATGTCTTTTTTATGCATGTGATTTCTCACATCTGGTTATAATATTTGTGAAGA
CATGCATTGCACGTGCACTTGGAAGCGGGCCCGTGGCCCGCGCTGGACGGCGCCGACGCCGACCCGAGCCACCTCGTCCG
CGTATTCTTGGAGCTGTGGCTGGTCGATTTACATGAAATTAATTCCCTCAGTTCTGGTGGCAAATATAATACACATAATC
CATATTGTTATGCACTAGCGTGTATGTGTGAAATAGATGGATTATGGTCCCGTACCCAATAAGATGGATATGTGTGTGTG
TTAGAGAGAGAGGGAGAGGGGGATAGAGAGTGAGGAAGACGGAGGGAGAGTGTGTGTCTGTGTGTGTGAGGATTTGATGG
TAAAAAAGATCGCCAATGTCGTAATATTGAACTCTTAAAGTTAATGTGGCTCCGTTGCAACGCACGGGCGTTCTTCTAGT
TGTAGTCT------------------------------------------------------------------------
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--------------------------------------------------------------------ACATACAACTGT
GTCCGGACAGGGTCGGTATAGATACCAACTACTAATTTGCGTTTCCTTCA--T--TTTTTATGAAACACACAAACAAACT
CATGCGTGTTTCACAGATACAAGAAATGAGAAACATTTTTGTGTTTTTATGGGAGAAAATAAAAACATAAACCG------
----TGATTTCCTAGACTATC-GAATCAATGGATTTAGAGGGAG-CACAGTTGCCCATGCCACGTTTACGTGCTATACTT
GGAGCGAAGTTATTTTTTAGTCAAATGGTATCAGAGAACACCACCGGTATGGTGTATCTTGGTGTAC-ATACAAATGTGT
ATGCACGTGATCGATCAGGACAAGGATAACAACTAATATGTTCACTTTTCATATATATTTTTTCTTCTGAAACACACAAA
CTCACGTGTATTTCTATCTAGATCCAACAACTGAGAAATATGATTGCGCTTTTGGGGAAG-AAAAACGAAAACCGTTGAC
CGTGTGAATTACTAAATGGCCGAATAGATCCAGAGGAAGCATAACTGGCCATGCGCGTTTACATGGTATACTTGGTACAA
AGTTATTTTCGGCATAGGTACCAGCCCGTATGTTACTATATGTGTAGTGTCTTATCATGATCACATGTGCGGTACACGGC
AAATAGCTGGCACACGAGTCTCGCCACCCTGCCGCGCCTCTGCTGGCCCC-ATCGGC----------------ACTGTGC
GGCGACAGCGGC-CAG-----------------------------------------------CCTCTCCCCTCCAG---
TTCTCACCCTCCCACGCGCCTTTAAA-TACCCCAACACCCCGCCCGACCGCAACCGCACACAAACGCA------------
----AAAACCCATA--------------------------CTTTCCTAGCTAGCCATGGAGAACGCCGAACACCACGACG
GAGCCATCACCAT-CCTCTCCCTTTCCCCTCCCCCTACGTCGGCGGCCCTCTCCCCGC----------------------
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-------------CGATATCCCACAACTC---------GGCGGC---------GCTGGCGAACGCGCGCTGGGTGCCCAC
CAGGGAGCAAATCGCGTTGCTGGAGGGGCTGTACCGCCAGGGGATGCGCACCCCCACCGCCAAGGAGATACATCAGGTGA
CGGCGAGGCTGCAGGAGCACGGCCCCATCGAGGGCAAGAACGTCTTCTACTGGTTCCAGAACC---------GGCTGCGC
CAGAAGCAGAAGCAGCAG---CA---GAGATCCGACTACTTCGCTAGGCAGCTCCGCCGTCCCCAGCCGCTGCCCACGCT
CCGCAGGACCCCCGGCCAC---GCCTTCTCCCCGGTCCAGCTGCAGGCGCCGCCGGCGCCGAAC----------------
-----------------------ACTCCTGCATGCAACGGAGAAGGTACGTCCGCAC---------ATGAACCC-CTCCA
TCTCTTCCTTCGACACGC----CATTCCATTAAATCTGCTTTTGGCAATTGGCATGTAGTACATCTTGATTGATTAGCTT
CCAAAAGCGCCTGTGCGTTTCTTAGCCTAGCTTTACGTTTGGGGTT-----TAGCTGGAAGGGATATGCATCTATGACTT
TCCATTGCAAACCCCCACGGCTTTCATGCGTCTG--------------------------------------------C-
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---------
>chr3D_893
CCTTA---------------------------------------------------------------------------
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-------CCCTCCAAGCACCTTTAAA-ACCCCCAACACTCCGCCCCACTACAAGCGCACACAAACGCA------------
----AAGGCTAGCCAAGCGCAAAGAAGATCCATATACATCC-TTCCTAGCTAGCCATGGAGAGCGTCGACCACCATGACG
AAGCCGCCACCCG-CCTGTCCCTTTCCCCTCCCCGTCCGCCGGCACCGCTCTCCCTGA----------------------
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-------------CGCCATCGCCCAACTC---------GGCGGC---------GCTGGTGAACGCGCACTGGGTGCCGAC
CAGGGAGCAGCTCGCCGTGCTGGAGGGGCTGTACCGCCAGGGGATGCGCACCCCCACCGCCGAGAAGATACATCAGGTGA
CCGCGAGGCTGCAGGAGCACGGCCCCATCGAGGGTAAGAGCGTCTTCCACTGGTTCCAGAACCAGCAGGTCCGGCTACGC
CAGAGGGAGAAGCAGCAG---C------GATCCGACTACTTCGCCAGGCAGTTCTGCCGTCCCCAGCCGCTACCCGTGCT
CCACAGCCCCTCTGGCCAC---CCCTTCTCCCCGGCCCAGCTGCAGGCGCCGCCGGCGCCGAAC----------------
-----------------------ACTCCTGCATGCAATGGAGAAGGTACGTCCGCAC---------ATGAACG--CTCCA
TCTCCGCCTTCGACACGC----CATTCAATTAAATCTGCTTTTGGCAATTGGCATGTA---CGTCTTGATT----AGCTT
ACAAATGCGCCTGTGCGTTTCTTAGCCTAGCTTTATGTTTGGGGTT-----TAGCTGGAAGGGATATGCATCTATGACTT
TCCATTGCAACCCAC-ACGGCTTTCATGTGTCTG--------------------------------------------C-
--------------------------------------------------------------------------------
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---------
>chr3B_893
CCTTA---------------------------------------------------------------------------
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-------CCCTCCAAGCACCTTTAAA-ACCCCCAGCACTCCGCCCGACTGCAAGCGCACAGAAACGCA------------
----AAGGCTAGCCAAGCGCAAAGAAGATCCATATCCATCC-TTCCTAGCTAGCCATGGAGAGCGTCGACCACCACGACG
AAGCCGCCACCCG-CCTGTCCCTTTCCACTCCCCGTCCGCCGGCACCGCTCTCCCTGA----------------------
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-------------CGCCATCGCCCAACTC---------GGCGGC---------GCTGGTGAACGCGCGCTGGGTGCCGAC
AAGGGAGCAGCTGGCCGTGCTGGAGGGGCTGTACCGCCAGGGGATGCGCACCCCCGCCGCCGAGGAGATACATCAGGTGA
CGGCGAGGCTGCAGGAGCACGGCCCCATCGAGGGTAAGAACGTCTTCCACTGGTTCCAGAACCAGCAGGTCCGGCTGCGC
CAGAGGGAGAAGCAGCAG---C------GATCCGACTACTTCGCCAGGCAGTTCCGCCGTCCCCAGCCGCTACCCGTGCT
CCACAGCCCCTCTGGTCAC---CCCTTCTCCCCGGTCCAGCTGCAGGCGCCGCCGGCGCCGAAC----------------
-----------------------ACTCCTGCATGCAACGGAGAAGGTACGTCCGC-------------------------
-------CTTCGGCACGCCATTCAATTAATTAAATCTACTTTTGGCAATTGGCATGTA---CGTCTTGATTGATTAGCTT
CCAAATGCGCCTGTACGTTTCTTAGCCTAGCTTTACGTTTGGGATT-----TAGCTGGAAGGGATATGCATCTACAACTT
TCCATTGCAACCCCCCGCGGCTTTCATGCATCTG--------------------------------------------C-
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---------
>chr5D_998
--------------------------------------------------------------------------------
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----------------------------------------------------GCCATGGAGAGCGTCGAGCACCAGCAGC
AGGCCGCCACCCG----CTCCCGCTCCCCGTCCCTTCCGGCGGCGCCGCCCTCCCCGC----------------------
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-------------CGCTGTCGCCCAACTC---------GGCGGCGGCGGCGGCGCTGGCGAACGCGCGGTGGACGCCGAC
CAAGGAGCAGGTGGGCGTGCTGGAGGGGCTGTACCGGCAGGGGCTGCGCACCCCCACCGCGGAGCAGATCCAGCAGGTGA
CGGCGCGGCTGCAGAAGCACGGCCCCATCGAGGGCAAGAACGTCTTCTACTGGTTCCAGAACCACAAGGCCCGCCAGCGC
CAGCGCCAGAAGCAGCAGGCCTT---------CGACTACTTCTCCAAGCAGTTCCGCCGCCCCCAGCCGCTGCCCGTGCT
CCACAGGCCCGCCGCCCACCCCTCCTTGCCCCCGATCCCGCTGCACGCGCCGCCGCCGCCACCGTCGCACGTGTCGTCGG
CGACGACGCCGGATCCTCCCGCTCCTCCTGCATGCAACAGACAAGGTACGTTACGTACGCGCGTGAACGAACC--CTCCA
TCCATCATCCATGGCCGCGTTCGT------------------------TTGGCACGTA---CGTCTTGACTGATTAGCCG
CCGATGGCCTGCGCGT-TTTTTTCGCTTAGCTTTACACTTGGGGTC-----TAGCTGGAAAGGATATGCATCTACGACTT
TCCATTTGCAACCC--ACGGCGTTCATGCGT-------------------------------------------------
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---------
>SNPs
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------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
---S------S---------------------------------S---------S-S---S-S-----------------
---SS--------------------------------------------------------------S------------
-----------------------------------------------------S---------------------S----
-------------------SS---------S-------------------------------------------------
------------------S-------------------------------------------------------------
------------------------------------------------------------------S-------------
-------S-----------------------S--------------------------------------------S---
--------------S-----------------------------------------------------------------
-------------------------------------S--S------S----------------S---------------
------------------------------------------S-----------------S-------------------
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-------------------S------------------------------------------------------------
-------------------------------------------------S--------S---------------------
--------------------------------S------------------S----------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S--------------S---------------------------
--------------------------------------------------------------------------------
---------------S------S-------S-------------------------------------------------
--------------------------------------------------------------S-----------------
---------S-------S--------------------S---------------------------------S-------
--------------S-S---S-----------------------S----S-----------SS-S---------------
-------------------------------------------------------S--------------------S---
---------S-------------S---------------------------S------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
---------------------------S------------------------------------------------S---
---------S--------------------------------------------------------------------S-
---------------------------------------------S---------S--SS------------------S-
-------------------------------------S------------------------------------------
--------------------------------------------------------------S---S-------------
----------------------------------------------------------------------S---------
------------------------------------------------S-------------------------------
------------------------S------------------------------------------SS-----------
------------S------------S------------S-----------------S--------------------S--
-----------S----S-----------------------------------------------------S---------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
------------S--------------------------------------------S----------------------
S-----------S---------------------------------------S---------S-----------------
----------S----S-S------------------------------------------------------S-------
-S------SS----------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------S-----------------------------------------------------
------S--
>forward_4225
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---------------------------------------------GATCGCAAGCGCACACAAAT---------------
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>reverse_9718
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-------------------------------------ACAATACCCCACCTTCGCAA-----------------------
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---------
>forward_8975
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---------------------------------------------------------------------------GAGTT
TCCGGCCACTGAACT-----------------------------------------------------------------
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>reverse_10158
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------GAT
GGGCGTGAAACAGTTACC--------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------
