>input_sequence_42828
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-------ATGGAGCTCATCGACAGCGGGTTGGCGCTGATGGAGATCTCCATGGGCGAGTCCAGTACAAAGACGAGGATGA
AGAGCATTAGAGAGGCGGAGCAAACCAATCTGAGGCGCATCAGAGAGTCGCAGGAGAGGATCCGGAGGAGGCAGGAGCAA
CTTGTTCGCGATCCACAGCCACCTCTTCGCTACGAGTTTGAGAAGGCTCCTACAGATGAGCAGGAGGCTGAGGACTACCG
TCAAATGTGGGAGATGTG----------CTTTCGCCACAATTTCGGTTCAATCGACGCGGAAAGTAAGAAATTCTTCACT
TGATTTTATCTCCCCATGAA------------------------------------------------------------
-----------------------------------TTGCCTTTGCGATTTCTTGAGATCGACGCGTGAAATCCACTTCGC
TATGTGATTTCTTGA-GATTGATGCAGAAACATAAGAAAAGCGATA--TTTTTATT-------GAATGTTTTAACTAGGA
TATGTCTGAGAACTAGATCAATTTGAGAAAAGAGTCTGAGAACTAGATTTATTTCACATCCCAATT-ATACTGTTAGAGT
AGAGACATTAATTGTGTTATATGGAATTGGATACCAATCCAAC------ATATCGTTACCATGGATGGTTGAGCTAGTA-
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------TTATATGTTTCAACTGGGATTTAT--------------------------------------------------
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-------------------------------------------------------------------------------T
GTAGAATCA-ATTCTTCTGGAAAATTGACAACAAATCCAGTCCAT-----------------------------------
------------------------------------------------------------------------------AA
CATATATTGG---------GAGCAGAGAAACCTCATTGGCTTTGCATATCGAACTAGGAGCAGGATATCGTAGTATTAAC
-----GACCCTTGATGCATTCATATCCTATTCCTATCTTAT---------------------------------------
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----------------------TACCCTGGTCTCTGGATGAGATTATGTTGAACT-TCTTTTCTGGCAACAAGCTAGTAT
TGC-----------------------------------------------------------------------------
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----------------------------------------------------------------------TATCCACTAT
---ATCTATCACTTAATTTAAATAA---TTTTTCAATGTTTATTAACTTAGCTTCTTCCATGCAGCTTCTCTTGGTCCCA
TTTGCTGTACAACCGGAACCAACCCAGCAGATGCTCTTCCGGAGAGTTGCATGCAGATCTTCTCCATCAAAGTCACTGAC
CTAAACAATGATCTCAGCTTGCCACTGGAGGTTCATGGCTTTGTTGCTGCCAGGGACTCGGTAGATCGTAAACGCAACTA
TCTCTTCAGATGCACCAGGGATAACTGCCAAACCCTCACTCCAAAGGTGAGTTAGTGCGACTATCTATGCAATGTAAACA
CTTTGTGTGTGTGTGTGTGTTTTAA-------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------TTAATAGTCTGGCAGTTAAGTGATCAATTATTATTGTGATGCTTGCATTGCAGGATC
CATTCTTGCACTTAACAGGCCCCTCTCGAGCGGTTCTGTTAATTGACCCTGTTGCGATTGAAGTTCAGCTAAAAGTAAAG
GGCAAAAAGGAGTCTGAAGATGAAGTGTTAGCTCTCAAATGTTTTTATTTCCATGAAAGGTATCATTTAGAAGATGGGAT
CCGTTTTCGCATCCCCA---------GCAAGCGCTGCATGCTTGAGTTTGCTTTGGCAGTGCTGCCTATGTCAGTTGAGG
CCATTGTGGGCATCCGAGTTGTTGATAGGTCATGGCCTGATCATTGTCCGGGGTTGGTTGTTTGCAGTACCAACAGTGTA
AAAGAAGGGAAAGTGGTGCTGCTTGATTTTCAAAATGGAGAGTTGCCTACCAAGTCAGATGGTGTGGTTGAGCTTGCAAG
GCGTGTTGTTTCTGTTGATTACCCAGAGGGAAAACTTACTGTTTCTGTGGAGGCCTCGCGGGGTCGATTTTCT-GCACGA
GGTACAGTCGACTTTGGGATGAAAGTGCCAAGGGGAAGTAGTACTCGCACGTGTGATCTGGTTTTCTGCAAAATGCTAGT
TACAGTTGCTTGGTCCCTTGTTTCTTGCTATCGGGTTTAA----------------------------------------
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-------
>chr2B_1_TraesCS2B01G425800
CAAGACTATTTTTTTGTTAATCTAAACTATTTTGAAAAATCCTTTTTAACAGGGGCCAAGGTACAAGCTTGCCTATTTTC
ACATGACAGTTCTTCAATGTAACAAGGGAATGATCAATTTTTGTTCCAAGCGCTCGTACTTTCAGTCTTTTGAAAATATT
TCACAGTTTTAATACGTTCGATAT--------AAACTTTGTTTGTAAGTTCATTTGCCATATATCAACACAGTTTGTTTA
AGACTTTGGAAAATATATTCTATTTCCGTATTTGCTTTATTTCATTATTTAAATTTTTTGTTCTTCCTTCTGAAAAGGGA
ATAAATTAGTTCTAAATTGATTCTACCCAATAATTTTTTCCTAATTGCGTTAATTCTGCTAAAAGAAGTTAAACCTCTAC
TATTTTCTCGACTAGTTAAGAAAACAAGATTTTGAAAACAGTTGTCAAAACAGCAATCAACTACAATTCGCAAAAAAAAG
TTGAAACAGTGTAGCGAGCAACTGGGCTTAGTAC----------------------------------------------
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------------------------------------------------------------------TTTCTGTGCATATC
AACACTTTCGGGTAGTTGCTCAGCCCGTTCTGGGCCTTCCTTTACTGAATCTATTAATAGTTGCACTTTTCGACATATGC
CTTTATTTGGGCATTGGTTGTAGGCATCCCCTTCTTTTCAAGGAATTTCTGCGCCCGGTTCCTGATCAAGAGTTGAAAAA
ACCAGAATATGATGCTTGCTACTTCAGCAGTAGGGCATGTTGATCTGCACAGAACATACTAAGCCGGGCCATTGGACACT
ATTG------GGCCGTGACACCTCCATTAAAAGGCCTGCCACGGGCGTGTATAGTACAAAAGAAAAAGAAAAACAAGTTG
GAGTCGGACGGACACCTTGTCTTCCCGGGGATAAAA-GGTGAGAGCCCCTCGTCAAAAATAAAAGAAAGGAAGAAAAAAG
ACACAACAGATCGATTGAGCGGACGCAATAGCGGCAGAGAGGAAACCCTAAGCAAGAAACCCTGGTCGATTGAGCGGCGC
GCCGGAGATGGAGCTCATCGACAGCGGGTTGGCGCTGATGGAGATCTCCATGGGCGAGTCCAGTACAAAGACGAGGATGA
AGAGCATTAGAGAGGCGGAGCAAACCAATCTGAGGCGCATCAGAGAGTCGCAGGAGAGGATCCGGAGGAGGCAGGAGCAA
CTTGTTCGCGATCCACAGCCACCTCTTCGCTACGAGTTTGAGAAGGCTCCTACAGATGAGCAGGAGGCTGAGGACTACCG
TCAAATGTGGGAGATGTG----------CTTTCGCCACAATTTCGGTTCAATCGACGCGGAAAGTAAGAAATTCTTCACT
TGATTTTATCTCCCCATGAA------------------------------------------------------------
-----------------------------------TTGCCTTTGCGATTTCTTGAGATCGACGCGTGAAATCCACTTCGC
TATGTGATTTCTTGA-GATTGATGCAGAAACATAAGAAAAGCGATA--TTTTTATT-------GAATGTTTTAACTAGGA
TATGTCTGAGAACTAGATCAATTTGAGAAAAGAGTCTGAGAACTAGATTTATTTCACATCCCAATT-ATACTGTTAGAGT
AGAGACATTAATTGTGTTATATGGAATTGGATACCAATCCAAC------ATATCGTTACCATGGATGGTTGAGCTAGTA-
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------TTATATGTTTCAACTGGGATTTAT--------------------------------------------------
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-------------------------------------------------------------------------------T
GTAGAATCA-ATTCTTCTGGAAAATTGACAACAAATCCAGTCCAT-----------------------------------
------------------------------------------------------------------------------AA
CATATATTGG---------GAGCAGAGAAACCTCATTGGCTTTGCATATCGAACTAGGAGCAGGATATCGTAGTATTAAC
-----GACCCTTGATGCATTCATATCCTATTCCTATCTTAT---------------------------------------
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----------------------TACCCTGGTCTCTGGATGAGATTATGTTGAACT-TCTTTTCTGGCAACAAGCTAGTAT
TGC-----------------------------------------------------------------------------
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----------------------------------------------------------------------TATCCACTAT
---ATCTATCACTTAATTTAAATAA---TTTTTCAATGTTTATTAACTTAGCTTCTTCCATGCAGCTTCTCTTGGTCCCA
TTTGCTGTACAACCGGAACCAACCCAGCAGATGCTCTTCCGGAGAGTTGCATGCAGATCTTCTCCATCAAAGTCACTGAC
CTAAACAATGATCTCAGCTTGCCACTGGAGGTTCATGGCTTTGTTGCTGCCAGGGACTCGGTAGATCGTAAACGCAACTA
TCTCTTCAGATGCACCAGGGATAACTGCCAAACCCTCACTCCAAAGGTGAGTTAGTGCGACTATCTATGCAATGTAAACA
CTTTGTGTGTGTGTGTGTGTTTTAA-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TTAATAGTCTGGCAGTTAAGTGATCAATTATTATTGTGATGCTTGCATTGCAGGATC
CATTCTTGCACTTAACAGGCCCCTCTCGAGCGGTTCTGTTAATTGACCCTGTTGCGATTGAAGTTCAGCTAAAAGTAAAG
GGCAAAAAGGAGTCTGAAGATGAAGTGTTAGCTCTCAAATGTTTTTATTTCCATGAAAGGTATCATTTAGAAGATGGGAT
CCGTTTTCGCATCCCCA---------GCAAGCGCTGCATGCTTGAGTTTGCTTTGGCAGTGCTGCCTATGTCAGTTGAGG
CCATTGTGGGCATCCGAGTTGTTGATAGGTCATGGCCTGATCATTGTCCGGGGTTGGTTGTTTGCAGTACCAACAGTGTA
AAAGAAGGGAAAGTGGTGCTGCTTGATTTTCAAAATGGAGAGTTGCCTACCAAGTCAGATGGTGTGGTTGAGCTTGCAAG
GCGTGTTGTTTCTGTTGATTACCCAGAGGGAAAACTTACTGTTTCTGTGGAGGCCTCGCGGGGTCGATTTTCT-GCACGA
GGTACAGTCGACTTTGGGATGAAAGTGCCAAGGGGAAGTAGTACTCGCACGTGTGATCTGGTTTTCTGCAAAATGCTAGT
TACAGTTGCTTGGTCCCTTGTTTCTTGCTATCGGGTTTAAAATCCAAGCTTATCTGTTTGGCCATCCTTACCCGTGGTTT
GCCCAGCTAAGCCGTTTGAACTATTTATGTATCTATATTGTCATGCCTTGGTACCTCCCTACCTGTTGTACTTGATTCAT
CGCGTTTGCTCCGATGTGGTATTACTTAGGCTGCTCAGGTAATGAGCATATTAGTTGTTGCTACTAAACTTTCTCACTCC
GCTGTAATGTTATATATTGTCTCTGGAAGTTTAAGCTTATTGGTAATGTTGCTGCTACATTGTTATGTAGCATCCTCCAG
AACTTTGTGTGCACTTGGTACCCCAATTGTCATATTGGTTGTGTTTCTTCTTCTATTTGATCTGATGTTCCTTGTTTTCG
TGTACTTGTAGTCTGGAACTTATGCGCGCACACAC--ACACAACACAAAGCCTTTTTAGGTCTCAAACAAGTTGGGGTAG
GCTAGCTGAACCTGTTGCTCTTACACTATCCAAACAAAACTTAGGGTGGCAGGGATTAAGGCGTCTGGAAGGGATTGGTC
CCTCTGGGGATTGGGTGACAGAAGTGGATCAACCAAGTCCCTCGGTGGATTTTGCCCACTAGAGTATTTGTTCCCCTATA
TAACCAAACAAGCCCTGTGGTCTGGAATTTATCTTTTTTGCCAAAGTATTGTTTGATGAGGAAAGGAAGGGCGATGTTGA
AGCTGATCAGGGTTCTTGCTATTAGAAGTCATTATTTTGTATGAGTTATCTGTGAAGCCTTTTACATCGTGTTGAACCAT
GACTGTTATACATCATCAAGTAGCTGCTAGTGATAGAAGTGAATTGTTCTGGTATCTCTGAAACACGCTGCCTGCAAATC
CGGATGCTAGTGAAGTGGGCAGACATCTATTTTCTCCTGTCTTGAGAGTAACAATTGCTGCCAAATGATAAACCAATGAA
CAACAAATATAATGGCTACCAGGATTGAAGGCAAGTAAATATTTTCACCAG-----TTGCTAGAGACTGTTGCCATAGTA
GAGGTGT
>chr2B_1
CAAGACTATTTTTTTGTTAATCTAAACTATTTTGAAAAATCCTTTTTAACAGGGGCCAAGGTACAAGCTTGCCTATTTTC
ACATGACAGTTCTTCAATGTAACAAGGGAATGATCAATTTTTGTTCCAAGCGCTCGTACTTTCAGTCTTTTGAAAATATT
TCACAGTTTTAATACG-------TTCGATATAAAACTTTGTTTGTAAGTTCATTTGCCATATATCAACACAGTTTGTTTA
AGACTTTGGAAAATATATTCTATTTCCGTATTTGCTTTATTTCATTATTTAAATTTTTTGTTCTTCCTTCTGAAAAGGGA
ATAAATTAGTTCTAAATTGATTCTACCCAATAATTTTTTCCTAATTGTGTTAATTCTGCTAAAAGAAGTTAAACCTCTAC
TATTTTCTCGACTAGTTAAGAAAACAAGATTTTGAAAACAGTTGTCGAAACAGCAACCAACTACAATTCGCAAAAAAAAG
TTGAAACAGTGTAGCGAGCAACTGGGCTTAGTAC----------------------------------------------
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------------------------------------------------------------------TCCCTGTGCATATC
CACACTTTCGGGTAGTTGCTCAGCCCGTTCTGGGCCTTCCTTTACTAAATCTATTAATAGTTGCACTTTTCGACATATGC
CTTTATTTGGGCATTGGTTGTAGGCATCCCCTTCTTTTCAAGGAATTTCTGCGCCCGGTTCCTGATCAAGAGTTGAAAAA
ATCAGAATATGATGCTTGCTACTTCAGCAGTAGGGCATGTTGATCTGCACAGAACATACTAAGCCGGGCCATTGGACACT
ATTG------GGCCGTGACACCTCCATTAAAAGGCCTGCCACGGGCGTGTATAGTACAAAAGAAAAAGAAAAACAAGTTG
GAGTCAGACGGACACCTTGTCTTCCCGGGGATAAAA-GGTGAGAGCCCCTCGTCAAAAATAAAAGAAAGGAAGAAAAAAG
ACACAACAGATCGATTAAGCGGATGCAATAGCGGTAGAGAGGAAACCCTAAGCAAGAAACCCTGGTCGATTGAGCGGCGC
ACCGGAGATGGAGCTCATCGACAGCGGGTTGGCACTGATGGAGATCTCCATGGGCGAGTCCAGTACAAAGACGAGCATGA
AGAGCATTAGAGAGGCGGAGCAAACCAATCTGAGGCGCATCAGAGAGTCGCAGGAGAGGATCCGGAGGAGGCAGGAGCAA
CTTGTTCGCGATCCACAGCCACCTCTTCGCTACGAGTTTGAGAAGGCTCCTACAGATGAGCAGGAGGCTGAGGACTACCG
TCAAATGTGGGAGATGCG----------CTTTCGCCACAATTTCGGTTCAATCGACGCGGAAAGTAAGAAATTCTTCACA
TGATTTTATCTCCCCATGAA------------------------------------------------------------
-----------------------------------TTGCCTTTGCGATTTCTTGAGATCGACGCGTGAAATCCACTTCGC
TATGTGATTTCTTGA-GATTGATGCAGAAACATAAGAAAAGCGATA--TTTTTATT-------GAATGTTTTAACTAGGA
TATGTCTGAGAACTAGATCAATTTGAGAAAAGAGTCTGAGAACTAGATTTATTTCATATCCCAATT-ATATTGTTAGAGT
AGAGACATTAATTGTGTTATATGGAATTGGATACCAATCCAAC------ATATCGTTACCATGGATGGTTGAGCTAGTA-
--------------------------------------------------------------------------------
------TTATATGTTTCAACTGGGATTTAT--------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------T
GTAGAATCA-ATTCTTCTGGAAAATTGACAACAAATCCAGTCCAT-----------------------------------
------------------------------------------------------------------------------AA
CATATATTGG---------GAGCAGAGAAACCTCATTGGCTTTGCATATCGAACTAGGAGCAGGATATCGTAGTATTAAC
-----GACCCTTGATGCATTCATATCCTATTCCTATCTTAT---------------------------------------
--------------------------------------------------------------------------------
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----------------------TACCCTGGTCTCTGGATGAGATTATGTTGAACT-TCTTTTCTGGCAACAAGCTAGTAT
TGC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TATCCACTAT
---ATCTATCACTTAATTTAAATAA---TTTTTGAATGTTTATTAACTTAGCTTCTTCCATGCAGCTTCTCTTGGTCCCG
TTTGCTGTACAACCGAAACCAACCCAGCAGATGCTCTTCCGGAGAGTTGCATGCAGATCTTCCCCATCAAAGTCACTGAC
CTAAACAATGATCTCAGCTTGCCACTGGAGGTTCATGGCTTTGTTGCTGCCAGGGACTCGGTAGATCGTAAACGCAACTA
TCTCTTCAGATGCACCAGGGATAACTGCCAAACCCTCACTCCAAAGGTGAGTTAGTGCGAC-------------------
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-------
>chr2D_1
CAACACTATTTTTTTGTTAATCTAAACTATTTTTAAAAATCCTTTTTAACAGGGGCCAAGGTACAAGCTTGCCTATTTTC
ACATGACAGTTCTTCAATGTAACAAGGGAACGATCAATTTTTGTTCCAAGCGCTCGTACTTTCAGTCTTTTGAAAATATT
TCACAGTTTTAATACGTACTGGATTCGATATAAAACTTTGTTTGTAAGTTCATTTGCCATATATCAACACAGTTTGTTTA
AGACTTTGGAAAATATATTCTATTTCCGTATTTGCTTTATTTCATTATTTAATTTTTTTGTTCTTCCTTCTGAAAAGGGA
ATAAATTAGTTCTAAATTAATTCTACCCAATAATTTTTTCCTAATTGCGTTAATTCTGCTAAAAGAAGTTAAACCTCTAC
TATTTTCTCAACTAGTTAAGAAAACAAGATTTTGAAAACAGTTGTCGAAACAGCAACCAACTACAATTCGCAAAAAAAAG
TTGAAACAGTGTAGCGAGCAACTGGGCTTAGTATTTTCTATGAGTCAATTGTAAGAAATCACCACATTTGCGGCTAGGTT
TGCAGGAAACCACCAACTCGTTAATCCGTTGCAAAAAACACCGCATTAGCAGTAAATTTGTTGCAAAAAGCACTGATCGA
ATGATTTGGCCCATTTAATCACTTTCTGACAAGTGAGGCCTGACTGTCAAGAGCTGACTTGGTAAACAAATGTCATACAC
ATCCCTGAATCTAAAAATAAAAAGCAATCAACCCCTTTGCAACCACTGCCGCAACTAACCACGCCACCGCCGCCGGAAGC
CCACCCGCCTCCCTGCCTCGATGACAGCAGCCTCGCTCGATTGGATCGAGAGGAGCTCCTCGATCTAGAGCCTCCCCTCG
TCCTTGGGCCTTCCGGCGACCAGCGAACGCCGCCGGCGAACCAACCCGGCGCACCTGCCGCCCCTCTGCCCTGTTCCTTC
TCCATCCTCTTTCTCTTCTCCCTGTGCCCTCTCTGACACCACCGACGGTTGCCGCAGGACCTCCATGGAGATCGCCCCGA
TTTGCTAGAAATCGCCATGGCTGCCTCCCCAACAACTCGCCGTTGGATCCGAGCATGCCTGATCTGGAGCACCTCCCTGA
TCTCCCTCGCGCCCGACCCGCCTAGATCCGGAGCCTCACCGTCGGACCCCCTCCTCTGCGCCCCATTCCAGCCGCTGCCG
GCCATGGCAGGAGCCACGCCGCCGCATACCAAAACAGGAAGCTCCGCTGTCACCATCCTGCCTTGCGCCGCCGTCGTCTG
CACTTCGTTGTCCCCATCATCAACGCCATCAACACCGGCCTGGACGCCGCCGATCGCTGCAGCACCGGTAGGCCAACCTC
AAAAATGCGCACGCTCCGGCCACCTCCTCGAACCCCGTCGCAGCCATAGCCAGGCAACAACAACAACAACAACAACGGCG
CCAGGGCGCCGTGCCGGACGAGTTCACGTTGCTTCGGCAGGAGGGATTGTCCACGGTGGTGTGCATGTGGGGGTCTGATT
GCTTTTGTTTTTTAGATCTAGGGGTGTATGTGTTATTTTTTTGCTAAATCAATTTCTTACAATCTGGCCCCACTTGTAAG
AAAGTGATTAAATGGGCCAAATCACCCGTTCAGTGCTTTTTGCAATGACTTAACAGATTTTCCGGTGTTTTCTGCAACGG
ATTAACGAGTTGGTGGTTTCCTGCAAACCTAGCCGCAAATGTGGTGGTTTCTTGCAATTGACTCATTTTCTGTGCATATC
AACACTTTCGGGTAGTTGCTCAGCCCGTTCTGGGCCTTCCTTTACTGAATCTATTAATAGTTGCACTTTTCGACATATGC
CTTTATTTGGGCATTGATTGTAGGCATCCCCTTCTTTTCAAGGAATTTCTGCGTCCGGTTCCTGATCAAGAGTTGAAAAA
ACCAGAATATGATGCTTGCTACTTCAGCAGTAGGGCATGTTGATCTGCACAGAACATACTAAGCCGGGCCATTGGACATG
TACTATACACGCCCGTGGCAGGCCTTTTAATGGAGGTGTCACGGCCCAA-----TACAAAAGAAAAGGAAAAACAAGTTG
GAGTCGGACGGACACCTTGTCTTCCCGGGGATAAAAAGGTGAGAGCCCCTCGTCAAAAATAAAAAAAAGGAAGAAAAAAG
ACACAACAGATCGATTGAGCGGACGCAATAGCGGCAGAGAGGAAACCCTAAGGAAGAAACCCTGGTCGATTGAGCGGCGC
GCCGGAGATGGAGCTCATCGACAGCGGGTTGGCGCTGATGGAGATCTCCATGGGCGAGTCCAGTACAAAGACGAGGATGA
AGAGCATTAGAGAGGCGGAGCAAACCAATCTGAGGCGCATCAGAGAGTTGCAGGAGAGGATCCGGAGGAGGCAGGAGCAA
CTTGTTCGCGATCCACAGCCACCTCTTCGCTACGAGTTTGAGAAGGCTCCTACAGATGAGCAGGAGGCTGAGGACTACCG
TCAAATGAGGGAGATGTG----------CTTTCGCCTTAATTTCGGTTCAATCGACGGGGAAAGTAAGAAATTCTTCACT
TGATTTTATCTCCCCATGAA------------------------------------------------------------
-----------------------------------TTGCCTTTGCGATTTCTTGAGATCGACGCGTGAAATCGACTTCGC
TATGTGATTTCTTGA-GATTGATGCAGAAACATAAGAAAAGCGATA--TTTTTATT-------GAATGTTTTAACTAGGA
TATGTCTGAGAACTAGATCGATTTGAGAAAAGAGTCTGAGAACTAGATTTATTTCACATCCCAATT-ATACTGTTAGAGT
AGAGACATTAATTGTGTTATATGGAATTGGATACCAATCCAAC------ATATCGTTACCATGGATGGTTGAGCTAGTA-
--------------------------------------------------------------------------------
------TTATATGTTTCAACTGGGATTTAT--------------------------------------------------
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-------------------------------------------------------------------------------T
GTAGAATCA-ATTCTTCTGGAAAATTGACAACAAATCCAGTCCAT-----------------------------------
------------------------------------------------------------------------------AA
CATATATTGG---------GAGTAGAGAAACCTCATTGGCTTTGCATATCGAACTAGGAGCAGGATATCGTAGTATTACA
TTAAAGACCCTTGATGCATTCATATCCTATTCCTATCTTATGGACGCCGATAAGTGCCACACGTGTGGGCGTTAGGGAGA
CTGCCCACACATTTTGTGTGGTGTGTAAGAGGAACAGCCCACACACCTACGTGTGGGCAAAACAAGTAATGCCCACACAC
CTCTTTTTTCCCTCCCGATCCCTCTCACGCGTGTGCGTGTGGGCGAAGTAGATAATGCCCACACGCACCGTATGTCAGGC
CTCGTACCTCGTGGTCCCGCACGCCATGCGTGACAGTCACCGCGCGCCCGCAGTTGCCATGGTCCAGACCCTCGTCCATG
TTCGTTTAACTGCAGTTGCCATGTCGCTGAACTACGGTTGCCATGTCGGACAACTGCAGTTGCCATGGTTGCTCAACTGC
AGTTGCCATGTATGGTCTGGTCTACTGTAGTTGCCATGATTTCAAAACTTTAGGAGTTGCCACATACTAACACTAGGCAG
TTGAGAGAGTTGCCATGTGCTCACAAGCATGCTAGGGCAGTTGCCATGTAAAAAGGACGAGTTGCCATCTGCTTAATTGC
ACGTTAGGGCAGTTGCCATGTACCATGCAAAAACACATGGCAACTCGGTAAAGAGAGAGTTGCCATCTGCTTACGTGCAC
ACTAGGCAGTTGCCGTGTACCCTGTAAAAACACATGGCAACTCGGGTAAAAAGAGAGTTGCCACCTGCTTATAAAGCACA
CTAGGGCAGTTGCCATGTGCGCTGCAAAACATATGGCGACTAGCAGCTTGGGTGTGGGAGAGGAGACGGGCGTGTGGGCG
AGATGGCAAATGCCCACACACTAGCCCTTGTGCGTGCATGGAAAGTGGCGTGTGGGCGAACTGCTGAACGCCCACACACC
AGCCCCTCCCGTGTGGTGAAACGGCCGTGTGGGCGACCGGATGAACGCCCACACACCAGGCCAGTCCTACGTGGCACTAG
AAACATGCCAAGATTCGTGCGCTCGCGAACGGACGCGGATCCACGCGTGTGGGCGAGATGCAAACGCCCACACGTGTGGG
CGTTAACATTTCCGTATCTTATTACCCTGGTCTCTGGATGAGATTATGTTGAACT-TCTTTCCTGGCAACAAGCTAGTAT
TGC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TATCCACTAT
---ATCTATCACTTAATTTAAATAA---TTTTTCAATGTTTATTAACTTAGCTTCTTCCATGCAGCTTCTCTTGGTCCCA
TTTGCTGTACAACCGGAACCAACCCAGCAGATGCTCTTCCGGAGAGCTGCATGCAGATCTTCTCCATCAAAGTCACTGAC
CTAAACAATGATCTCAGCTTGCCACTGGAGGTTCATGGCTTTGTTGCTGCCAGGGACTCGGTAGATCGTAAACGCAACTA
TCTCTTCAGATGCACCAGGGATAACTGCCAAACCCTCACTCCGAAGGTGAGTTAGTGCGACTATCTATGCAATGTAAACA
CTTTGTGTGTGTGTGTGTGTTTTAA-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TTAATAGTCTGGCAGTTAAGTGATCAATTATTATTGTGATGCTTGCATTGCAGGATC
CATTCTTGCACTTAACAGGCCCCTCTCGAGCGGTTCTGTTAATTGACCTTGTTGCGATTGAAGTTCAGCTAAAAGTAAAG
GGCAAAAAGGAGTCTGAAGATGAAGTGTTAGCTTTCAAATGTTTTTATTTCCATGAAAGGTATCATTTAGAAGATGGGAT
CCGTTTTCGCATCCCCA---------GCAAGCGCTGCATGCTTGAGTTTGCTTTGGCAGTGCTGCCTATGTCAGTTGAGG
CCATTGTGGGCATCCGAGTTGTTGATGGGTCATGGCCTGATCATTGTCCGGGGTTGGTTGTTTGCAGTACCAACAGTGTA
AAAGAAGGGAAAGTGGTGCTGCTTGATTTTCAAAATGGAGAGTTGCCTACCAAGTCAGATGGTGTGGTTGAGCTTGCAAG
GCGTGTTGTTTCTGTTGATTACCCAGAGGGAAAACTTACTGTTTCTGTGGAGGCCTCGCGGGGTCGATTTTCT-GCACGA
GGTACAGTCGACTTTGGGATGAAAGTGCCAAGGGGAAGTGCTGCTCGCACGTGTGATCTGGTTTTCTGCAAAATGCTAGT
TACAGTTGCTTGGTCCCTTGTTTCTTGCTATCGGGTTTAAAATCCAAGCTTATCTGTTTGGCCATCCTTACCCGTGGTTT
GCCCAGCTAAGCCGTTTGAACTATTTATGTATCTATATTGTCATGCCTTGGTACCTCCCTACCTGTTGTACTTGATTCAT
CATGTTTGCTCCGATGTGGTATTACTTAGGCTGCTCAGGTAATGAGCATATTAGTTGTTGCTACTAAACTTTCTCACTCC
GCTGTAATGTTATATATTGTCTCTGGAAGTTTAAGCTTATTGGTAATGTTGCTGCTACATTGTTATGTAGCATCCTCCAG
AACTTTGCGTGCACTTGGTACCCCAATTGT------------GTTTCTTCTTCTATTTGATCTGATGTTCCTTGTTTTCG
TGTACTTGTAGTCTGGAACTTAAGCGCACACACACACACACAACACAAAGCCTTTTTAGGTCTCAAACAAGTTGGGGTAG
GCTAGCTGAACCTGTTGCTCTTACACTATCCAAACAAAACTTAGGGTGGCAGGGATTAAGGCGTCTGGAAGGGATTGATC
CCTCTGGGGATTGGGTGACAGAAGTGGATCAACCCAATCCCTCGGTGGATTTTGCCCACTAGAGTATTTGTTCCCCTATA
TAACCAAACAAGCCCTGTGGTCTGGAATTTATCTTTTTTGCCAAAGTCTTGTTTGATGAGGAAAGGAAGGGCGATGTTGA
AGCTGATCAGCGTTCTTGCTATTAGAAGTCATTATTTTGTATGAGTTATCTGTGAAGCCTTTTACATCGTGTTGAACCAT
GACTGTTATACATCAGCAAGTAGCTGCTAGTGATAGAAGTGAATTGTTCTGGTATCTCTGAAACACGCTGCCTGCAAATC
TGGATGCCAGTGAAGTGGGCAGACATCTATTTTCTCCTGTCTTGAGAGTAACAATTGCTGCCAAATGATAAACCAATGAA
CAACAAATATAATGGCTACCAGGAGTGAAGGCAAGTAAATATTTTCACCAGTTAACTTGCTAGAGACTATTGCCATAGTA
GAGGTGT
>chr2D_894
AAAAGAA-------------------------------------------------------------------------
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--------------------------------------------------------------------GGAAG-AAAAAG
GCACAACAGATCGATTGAGCGGACGCAATAGCGGCAGAGAGGAAACCCTAAGCAAGAAACCCTGATTGATTGAGCGGCGC
GCCGGAGATGGAGCTCAGCGACAGCGAGCTGGCGGGGGTGAAGAGCTA--------------------------------
----------------------------------------CAGAGAGTACTTGGCCTGTGATTT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GTTGAGATGTACGCCGTAAATCTGCTCTCAG
TCTGTGGATTCCTGAGATCGATGCAGGAAATCGGGTTGGCTTTGTGATTTCTTGAGATCGATGCAGGAAATCGGTTTGTC
TTTGTGATTTCTTGA-GATCGATGCAGGAACATAATGAAAAGTTACCTTTTTTATT-------GTATGTTTTAACTTTTT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TT
TAGGGGTTGTATGTTTTAACTGAGATATCTCCTTCCTTGCCGTGCATCCCAGAGTAGAGGGAGGCTGGAGTAGTGAGATC
CAAACGCAAGATGTTGCCAAATCCTTGCAGCATAGGGGCAGCCGATGAAGAGGTGGTCTGTGTCTTCATCCTGGTGAAGG
CATCTTGGGCAATCAGAGTTTGGCGTGATTGTCTTGTGAGCGAGATTTGCCTCGGTATTTAGCCTTCCCTTGAAGGCCAA
CCAGGAAAATGGCTTGATCTTGTTCGGCACCCTGGAGAGCCAAATAAAGTCGGCATTTCTGTCTTCTTGAGGCTCTGTGG
TTAGAAGCTGGTAGGCCTTTTTTTGTTTAGAGAATGACAAACCGCCATTAAGGAAGCGCGAGGCCGGCTCATCGTTGAGC
ATGAAATCCTGCAGCAGAGACAAAAGAGTAGCCAATTCTGTGAAAGCAGCAGAGGTTAGGTGATCACGCAGGTTAAATTC
TAAACCAAAATGCATAATATTTGCCACTCTAGCAAAGGTCCTGGTGGAGTGGGAAAACAAGCAAGGGAAAGTTTTTGAGA
GTGGCTGCGAGGTGAGCCACTTGTCTAGCCAGAAATAAGTGTGACCCCCATTGTTTGTTAGAACGAAGGAAATGGTTTGC
AGTGTTGGTATGTGTGAGTTTAAGGTTTTGCATAGAAAGGATTTGTGGTTTGCAGTACTTGCCTGCTTATGAAATTTGCT
GTCAAAGCT-CTGCTCCCTGAAAATACACCGTGGTTGGATTGGCTGTCTTTGCAAGGCTTCATGACTACTGTGTTTCTGA
TTGGTTTCCTTTGGTTTCCACCTTGTAAGCGTTGTAATCCTCCTTTGTTCTTAATACAATGTGTGTTATTGCTAAAAAAA
CATTATATTAGAGACTAAATAGTAGAGAAACTGACTTTGCTTTGCATATCGAACTAGGAACATGATAGTCTAGCATTAGA
TTAAAGACCCTGTATGCATTGATATCCTAT------CTTAT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TACC-------CGGGATAAGAGTGTTGAATTGT-TTTTTCCTGGTAACAAGCTAGTTT
GTTAC--CCCCTGTCCCTATTTACATGGCACACTCGTTTTCCATGATTAAACGGTGACCATCAATAATATACTAAATATA
TA-----------------TCATGGAAATTATACCGTTGGAAACTACATATTATTACACATCAAATGTTATCACACCTAG
CTCACATTTTATTTGTTA---AAGTTGAATCTTGAAATATCTGTACGCCACGTAAATAGGGACGAGGGAATATCCACTAA
TCCATCGATCACTTAGTTTAATTTCCCTTTTTTTCAATTTTCTTAACTTAGCTTTTTCCTTGCAGACTTGCA--------
----------------------------AGATACTCTTCCCAGGAGATCCATGCAGATCTTCTCCATCAAAGTCACCGAC
CTAAGATATGGTCTCATCTGGCCACTGCAGATTTATGGCTCTGTTGCTTTCAGGAACTCAATAGGACATAAAGCCAACTA
TCTCTTCAGATGCACCAGGGATAGCTTCCAAACCATCACTCAGAAGGTGAATGAGCGTGGCTAC------------AACT
CTCCACATGTCTATTTGTGTTAACTTAATTCTCTTGCAGCCTGCTAGTAGCCTAGTACTATTTAGACCTGGAACTACTTC
ACGGACGATTTTTGGCTGAACGATACCTGCACGATGGCTAATCCAAGGGCGTACGGCTGTTCAGAATTGCCAATGGATGG
TGCGAGGAGCCATGTCGTGCATGTATTGGCTAGCAATCGTCGTCTGTGTAGCAATGCTCATTTAGACCTACAATCGCTTT
GTGTCTTCTGCTTCAACTTCTT-TTAATAGTCTGGCAGGTAATTAATTAGTTATTATTGTGATGCTTGCATTGCAGGATC
CATTTTTGCGCTTAACAGGCCCGTCTCAAG-CATTTGGTTACTTGGCAGGGTTTTCATTGATGTTCAGTTAAAAGTAAAG
TGCAAAAAAGAGTCTGAGGATGAAGTGTTGACTTACAAATTTTATGAGTTTCGTCAAGATTTTCGGTTCGGTCTTC----
-----TGATACCAAGACCTATTCCCTGCAAGCGCTGCACACTTGAGTTTGCTTTGGCAGTGCTGCCTTCGTCAGTTCAGG
CCACTGTGGGTGTCCGAGTTGTTGATGGGTCATGGCCTGATCAGTGTCCGGGGCTGGTTGCTTGCAGTACCGACAGTGTA
AAAGGAGGGAAAGTGGTGCTGCTTGATTTTCCAGATGGAAAACTGCCTACCAAGTCTGATGGTGTGGTTGAGCTTGTGAG
GCATGTTGTTTCTGTAGATGAACCAAAGGGAAAACTGGTTGTTTCTGTGAAGGCCTCTCGGGATGGGTTTTCT-GCACAA
TGTACAGTCGACTTTGAGATGCAAGCGTCAGGAAGAAGTACAGACG---TATGTGATCTTATTTTCTGCAAGATGGAGGT
TACAGTTTGTTGGTC-----------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr2B_895
-AAAGAG-------------------------------------------------------------------------
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--------------------------------------------------------------------GGAAGAAAAAAT
ACATAACAGATCGATCAAGCGGACGCAATAGCAGCAGAGAGGAAACCCTAAGCAAGAAACCCTGATTGGTCGAGCGGCGC
GCCGGAGATGGAGCTCAGCGACAGCGAGCTGGCGGGGGTGAAGAGCTA--------------------------------
----------------------------------------CAGAGAGTACATTGAGTTGATGGAGAAGAAGGAGGAGCAA
CTTCGTAAAGACTGCGAGATCAAGGACAAGCGGACATATGGG---------------GAGCAGGAAATCGAGGAACACCG
TGAAGGCAGCAGGTCCTTTTGTTCCTTACTTTCGCCTTCCCC----------CGTCGCGGCAGGTAAGAAATTCCTGACT
CCAAATTTTCTTCCACTGAATGAATCTACGAACAAAGCTAGCTCCGATAGTTGAGATGTACGAAGTAGATCGGCCTTGGC
TTTGTGGATTCCTGAGATCGATGCAGGAAATCGGGTTGGCTTTGTGATTTCTTGAGATCGATGCAGGAAATCGGCTTGCC
TTTGTGATTTCTTGAAGATCGATGTAGGAACATAATGAAAAGTGACCTTTTTTTATTGTACTAGTATGCTTTAATTGAGA
TATCTCTGA-------------------------------AACTAGATTTATTTTACATCCCAATTTATACCATTATAGT
CTAGACCTTCCTTGCCTTGCAATTGCATAGATGGATGCCTCAATATCTGATCTAGTTACCATGGATGGGAGTATGCTGTT
GTTTACTAATTACTACTACCTCTGTAAACAAATATAAGTCGTTTTAGGGACTTGACGGAGGGAGTAATAACAAGCTAATA
TTGTGTTTTTCTGTTTCAATTGAGATTTAG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
TTTAGAACCCATTCCCCTGGAAGAAGGGCCACAAATCCAGTCCAT-----------------------------------
------------------------------------------------------------------------------AA
CATTATATTAGAGACCAGAGAGTAGAGAAACCGACTTTGCTTTGCATATCGAACTAGGAACAGGATACTCTAGCATTAGA
TTAAAGACCCTGGATGCATCGATATCCTAT------CTTCT---------------------------------------
--------------------------------------------------------------------------------
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----------------------TACC-------CTGGATGAGAGTATATTGAATTGTTTTCCCTGGTAACAAGCTAGTTT
GTTACTCCCTCTGTCCCTATCTATATGGCACCCTCG-TTTCCATGATTAAACATTGACCATCAATTTCATCAATCAATAA
TATAATCAATTACTATATGTCATGGAAATTATACCGTTGGAAACTACATATTATTACTCATCAAATGGTATAACACCTAG
CTCACACGTTATTGGTTATTAAAGTTGAATCACAAAATACGCGTGTGCCATGTAAATAGGGACGATGGAGCATCCACTAG
TCCATCTATCACTTAGTTTAATTTCCC-TTTTTTCAATTTTCTTAACTTAGCTTTTTCCTTGCAGATTCTCAATATGG--
----------------------------------TCTTCCCAGGAAATCCTTGCAGATCTTCTCCATCAAAGTCACCGAC
CTAAAATATGGTCTTATCTGGCCACTGCAGGTTTATGGCTCTGTTGCTTTCAGGAACTCGGTAGAACCTAAAGTAAATTA
TCTCTTCAGATGCACCAGGGATAACTGCCAAACCCTCACTCAGAAGGTGAATGAGCGTGGCTAC------------AACT
CTTTGTGTGTCTATTTCTGTTAACTTAATTCTCTTGCTGCCTGCTAGTAGCCTAGTGCTATTTAGACCT-----------
--------------------------------------------------------------------------------
---------------------------------------------------------------------ACAATCACTTT
GTGCGTCCTGATTCAACTTCTTTTTAATAGTATGGCAGGCAACTAATTAATTTTTATTGTGATGCTTGCATTGCAGGATC
CATTTTTGCGCTTAACAGGCCCGTCTCGTGCCATTTGGTTACTTGACATGGTTTTCATTGATGTTCAGTTAAAGGTAAAG
TGCAAAAAAGAGTCTGAAGATGAAGTGCTGACTTACAAATTTTCGGATTTCCATCAACTTTTTCCTTTTGATCCTTCTAA
ACATGTGATACGAAGACCTATTCCCTGCAAGCGCTGCACGCTTGAGCTTGATTTGGCAATGCTGCCTTCGTCAGTTGAGG
CCACTGTGGGTGTCCGAGTTGTCGATGGGTCATGGCCTGATCAGTGTGCGGGGCTGGTTGCTTGCAATACCGAGAGTGTA
AAAGGAGGGCAAGTGGTGCTGCTTGATTTTCAAGATGGAAAACTGCCTACCAAGTCTGATGGTGTGGTTGAGCTTGTGAG
GCGTGTTGTCTCTGTAGATTACCCAGAGGGGAAACTGATTGTTTCCGTGGAGGCCTCTCGGGATGGGTTTTCT-GCACAA
TGTACAGTCGAATTTGAGATGCAAGCGTCAGGAAGA---AGTACTGACATGTGTGACCTTATTTTCTGCAAGATGGAGGT
TACAGTTTGTTGGTC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr2A_2204
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-------------------------------------------------ATTATTATTGTGATGCTTGCATTGCAGGATC
CCTTCATGCGCCTAACATGCCCGTCTTGAGTTGTTCTGTTAATCGACCCGGTTGCCATTGAAGTTCAGCTAAAAGTAAAA
GGCAAAGATGAACCTGAAGATCATGTGTTGGCTTTCACATGTTTCTATGTTCATGAAATGTATCATTTGGAAGATGGGAT
TCATATACGTACCCCTC---------GCAAGTGTTGCACGCTTGAGTTTGCTCTAGAAATGTTGCCTATGTCAGTCAAGG
CTACCGTGGGCATCCGAGTT-TTGCTGGGCCATGGCCCGATTAGTGTTCGGGGCAGGTTGTTTGCAGTACCAACAGTGTA
AAGGAAGGGAGAGAGTTATTGCTTGATTTTCAAGATGGAAAACTGCCTACCAAGCCATATGGTGTTGTTGAGCTTGTGAT
GCTTGTTGTTTCTGTTGATTACCCGAAGGGAAACTTGATTGTTTATGTGGAGGCCTATCGAGATGGGTTTTTTCGCATGA
GGCACGGTTGACTTCGGGGTGAAAGTGTCTGGCGGA---AGTACTCGCATATGTGATCTTGTTTTCTGCAAGATGGCAGT
TAC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------
>SNPs
--------------------------------------------------------------------------------
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-----------------S-SSS----------------------------------------------------------
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----------------------------------------------S---------S-----------------------
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---------------------------------S----------------------------------------------
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--------------------------S-----------------------------------------------------
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-SS-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S----------------------SSSSSSSSSSSS--------------------------------------
----------------------S----S----------------------------------------------------
-----------------------------------------------------------------------------S--
----------------------------------S-S-------------------------------------------
-----------------------------------------------S--------------------------------
----------S---------------------------------------------------------------------
---------------S----------------------------------------------------------------
S------S------------------------------------------------------------------------
------------------------S-------------------------------------------S-----------
-------
>forward_457
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------TGAAAACAGTTGTCAAAACAGCAAT-----------------------
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>reverse_6267
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--------------------------AGGTCATGGCCTGATCATTGT---------------------------------
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>forward_6114
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----------AGTCTGAAGATGAAGTGTTAGCTC----------------------------------------------
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>reverse_7441
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CGGATGCTAGTGAAGTGGGC------------------------------------------------------------
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-------
