>input_sequence_42809
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ATGGATTCCTCGCCGTCTG
ACCTAACCCTAGACTACACGCCCAGCGGCAACGGCGCGGCGTCTGCCGGCGGCGGCTATCCAAAGCAGGCGTCGCCGGTC
GTGGACCACCACCATCATCTCTCGGCGGAGCAGGCGACGACGCAGAAGCTGCAGGAGTTCCTGGCCCGCCTCGACGACGA
GCGGCTCAAGATCGACGCCTTCAAGCGCGAGCTCCCGCTCTGCATGCAGCTCCTCAACCAAGGTAATTAACGTGCCGAAC
TGCCCATGCATGTGTGCTTACGTGGAAGGC-GATGGAGCTCTGCCTGACTGAATAATGTATGTGTGGGTGGGTGCAGCTA
TGGAGGCGTACAGGCAGCAGCTGGAGGCGTGCCAGATGGGGAGCCATGGCGGCGCGGCGGCGAGGGCGCCGCTGGTGCTC
GAGGAGTTCATACCGCTGAAGAACATCGGGATCGACGCGGCGGAGAAGGCGGCCGGGAACGCGCCGTCGGAGAAGGCGAA
CTGGATGGTGTCGGCGCAGCTGTGGAACGGGCCGGCTGCGGGAGACGCGGCGGCCAAGGGCCCGCAGACTCCCAAGGAGC
GCTCGGAGCACCCGCTGGACACGAGCCCCATGCTGGGCGGGCTCGACGGCGGCGGCGGCAACGGCGTCGGCGCCTTCCTC
CCGTTCACCAAGGAGAAGGCCTGTATGGCGGAGAGTGCGGCGCTGCCGGAGCTCGGGCTCGCGCCCGCGGAGAAGGACCG
GGAGGCTGACAGAAAGCCGTACCACGACGACGGCGGCAGCAACGGCACTGTAGTCTCGCGGAGAGACGTCGGTGCACCAC
CGACGTCTACGGCGCCGGAAGGGCAGTCGGTGCCGCCCGCTCCGCAGACGAACCGGAAGGCCCGGCGGTGCTGGTCGCCG
GAGCTGCACCGCCGCTTCGTCAATGCCCTTCAAATCCTGGGCGGCGCTCAAGGTATT--CACACAGACGTCCTCATGTAA
TGATCTACTGTAGTAACTATTTGGATGCATCAAATTAACCTGCTGAGTCTGAATGAATTACGTGTGTGCCCAAGACAAAT
TCTAAATCTCTTTTGTTGTTTGCAAATTGATTAAAGTGGCGACCCCGAAGCAGATCCGCGAGCTCATGAAGGTGGATGGA
TTGACCAATGATGAGGTGAAAAGCCATCTCCAGGTAATTATAATCTCATCAT-ACGCATCTTGCATTCTCTCTTCGTA--
-CGTTCCAGTAATTATGCATGCTGCTGCTTTAATTATGA---GTAGAACGATTAACTGATTATTATATGAACACATGACA
CATGGGTGCGTGTGTATCTAAATTGAAGTTTTTG-----TTTGTGTTGCGAGCAGAAGTACAGGTTGCACACGCGACGGC
CGATGCCGGCGCCGACGGCGCCGCCTGCGGGGGCGCCGCAGCTGGTGGTTCTTGGGGGCATATGGATGCCGCCGGACTAC
GCGGCGCAGGGGGCTGGACCGACCGCCATCTACGGGGCGCACCCGGCGACGCAGGCGCACTACACGGCGGCGGTGTCGGC
GCAGGAGTACTACCAGAACGCAGCCGCGGCCGCCCACCACGGCCACCACATGCAGCACCACCAGGCGGCCTCCATGGTGC
ACCACCGCGCGGTGGCACCTACGCCACCGCAGACCGCCTACAAGGTGGACCCGGTGTCGGCAGCAGGGTCCCAGGGGTCG
TCGGAGGGCCGGCGTAGCAGCGGCGGCGGCAGGGAGAGGTCGGAGAGCATCGAGGAGGAGGGCGAGGAGCGGGAGGACGA
GGAGGACGAGGACGAGGACGGCATGGCGGCCAACGGCGACGCCGAGCAGATCAACTACTAA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr3B_1_TraesCS3B01G144100
AGTTGCATCGACACTACCCTGAAGCTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGCCACTGCTATGAAGAGCCCAGCGGGAGACGAGGCC
CAGGGACCAGGCAAGAGGGTGAGAAGGCCCAGCGAGCGCTACCCAGCCCACAAGTGGGTGACCTAGGCTACTTATCGGGA
GGAGTCTCTGGAGGAAGGCAGGCAGGATTTAGTTGGCAATTCTTCGGCGGCGGCGGCTTCCTTCCCCTCCCCCTCTCTTT
AGAACCCTAGTTACTTCAGATTTGGTGTAGTTCCGAGACAATCTTGTATTAGATCCACTGAGAGCGTAACACTGTACATA
CAGTACAAAGACCAAAAACCACATGACCCCAGCTGTGTCATGCGTGGTCGCCTTGCTACGGCTATATCCTACTGCACCAC
CTTGTGGTACATGAAACCTCCTGCATGCATGCAT--GCATGCAGAGGATTAGCTTTTGGCCCCTTTGATCTTTGCAAGAA
GTTACCATGCCCTTGGCTTTATCCCTCTAGTCTAGTCTGCAGTTCTGGTGGTCTACAGTACCTAGATCAAAGTATCAAAC
ACACACATACATACAGGGAGAAACTTTTCCTTTTCACCCCCTCTAAATCCGACTTTATTCTCTCTACCCTCCCAGAAATC
ACCCTTAAAAACAAGCCGATTCCACCCCGATCCCCCCATCCACACACACA--------C-----CCCTGATATCTAAGCA
GGAGTAATATACTGGAGCTTCCCTAGCACCTCACTA--GCTGCACCACTTCACAC----ACATGGATTCCTCGCCGTCTG
ACCTAACCCTAGACTACACGCCCAGCGGCAACGGCGCGGCGTCTGCCGGCGGCGGCTATCCAAAGCAGGCGTCGCCGGTC
GTGGACCACCACCATCATCTCTCGGCGGAGCAGGCGACGACGCAGAAGCTGCAGGAGTTCCTGGCCCGCCTCGACGACGA
GCGGCTCAAGATCGACGCCTTCAAGCGCGAGCTCCCGCTCTGCATGCAGCTCCTCAACCAAGGTAATTAACGTGCCGAAC
TGCCCATGCATGTGTGCTTACGTGGAAGGC-GATGGAGCTCTGCCTGACTGAATAATGTATGTGTGGGTGGGTGCAGCTA
TGGAGGCGTACAGGCAGCAGCTGGAGGCGTGCCAGATGGGGAGCCATGGCGGCGCGGCGGCGAGGGCGCCGCTGGTGCTC
GAGGAGTTCATACCGCTGAAGAACATCGGGATCGACGCGGCGGAGAAGGCGGCCGGGAACGCGCCGTCGGAGAAGGCGAA
CTGGATGGTGTCGGCGCAGCTGTGGAACGGGCCGGCTGCGGGAGACGCGGCGGCCAAGGGCCCGCAGACTCCCAAGGAGC
GCTCGGAGCACCCGCTGGACACGAGCCCCATGCTGGGCGGGCTCGACGGCGGCGGCGGCAACGGCGTCGGCGCCTTCCTC
CCGTTCACCAAGGAGAAGGCCTGTATGGCGGAGAGTGCGGCGCTGCCGGAGCTCGGGCTCGCGCCCGCGGAGAAGGACCG
GGAGGCTGACAGAAAGCCGTACCACGACGACGGCGGCAGCAACGGCACTGTAGTCTCGCGGAGAGACGTCGGTGCACCAC
CGACGTCTACGGCGCCGGAAGGGCAGTCGGTGCCGCCCGCTCCGCAGACGAACCGGAAGGCCCGGCGGTGCTGGTCGCCG
GAGCTGCACCGCCGCTTCGTCAATGCCCTTCAAATCCTGGGCGGCGCTCAAGGTATT--CACACAGACGTCCTCATGTAA
TGATCTACTGTAGTAACTATTTGGATGCATCAAATTAACCTGCTGAGTCTGAATGAATTACGTGTGTGCCCAAGACAAAT
TCTAAATCTCTTTTGTTGTTTGCAAATTGATTAAAGTGGCGACCCCGAAGCAGATCCGCGAGCTCATGAAGGTGGATGGA
TTGACCAATGATGAGGTGAAAAGCCATCTCCAGGTAATTATAATCTCATCAT-ACGCATCTTGCATTCTCTCTTCGTA--
-CGTTCCAGTAATTATGCATGCTGCTGCTTTAATTATGA---GTAGAACGATTAACTGATTATTATATGAACACATGACA
CATGGGTGCGTGTGTATCTAAATTGAAGTTTTTG-----TTTGTGTTGCGAGCAGAAGTACAGGTTGCACACGCGACGGC
CGATGCCGGCGCCGACGGCGCCGCCTGCGGGGGCGCCGCAGCTGGTGGTTCTTGGGGGCATATGGATGCCGCCGGACTAC
GCGGCGCAGGGGGCTGGACCGACCGCCATCTACGGGGCGCACCCGGCGACGCAGGCGCACTACACGGCGGCGGTGTCGGC
GCAGGAGTACTACCAGAACGCAGCCGCGGCCGCCCACCACGGCCACCACATGCAGCACCACCAGGCGGCCTCCATGGTGC
ACCACCGCGCGGTGGCACCTACGCCACCGCAGACCGCCTACAAGGTGGACCCGGTGTCGGCAGCAGGGTCCCAGGGGTCG
TCGGAGGGCCGGCGTAGCAGCGGCGGCGGCAGGGAGAGGTCGGAGAGCATCGAGGAGGAGGGCGAGGAGCGGGAGGACGA
GGAGGACGAGGACGAGGACGGCATGGCGGCCAACGGCGACGCCGAGCAGATCAACTACTAATTAAACGGATCAATTAAGT
AGCGCGCGCACCAATTAGCTAGTAGCCCCTAATTAAG--------------AAGTTGGTATAACGAGATTGTTTTCTGTC
CGGAAAGTGATTTTTTGGCGCGGAGAACGGAAGCCGGTCTCTGGCTTGAGTGGAGCAGCGGGAGCCTGAGATTGTCTCAT
TCGTGATGTGATCGATATACGGATGGATTTGTGAGGCCTTTTCTCTCCTTCTTTTTTCTTCCCCTTC-CTCTTTTGGGCT
TTGTTTTTGTGCTAGCAAATAATTTGGTAAATATTTCATGATGGAAATATATGACTAGCTTTGTAAACTTGG-TTGGAGG
GGAAAATAATACTCCCTCCGTTCCTAAATAATTGTCTTTCTAAAGATTTCAACAAGTGACTACATACGGAGCAAAATGAG
TGAATCTACACTCTAAAATATGTCTACATACATCCGTATGTTATAGTCCATTTGAGATGGCTAGAAAGACAACTATTTGG
GAACGGAGGGAGTAATTATTAAGGAGATCAGTGTACTGAGCTTTAGGGC------TGTGTTTGTTCCTTGATTTTAAAGT
TCAATAAACGGTGTGAATTGTCAGTAAGCAATAGTGGAAGACCATTTCTTTTAAGTGCTGAATAATTGATTCCAGAATTT
CTCTGGTTTGTGTAATAACCTGTCTCAGTATTTTTACCTCTCGGGT--------GGATGTTCTCCTGATATCCAAAGTGA
ATTCCTTTCACTTTAAAAAAGATGAACTTTTACTCTGTTTGCACCAAAGTTTACAAAGATGGATGATATAACACTATAAC
TTGTTGCATATAAATACAGAAATTCAACAAATTTCTCATCATTTTGTAACTGGAAATGTACATTTCGCTTGTTTGATGGA
CCCATATGTTTGTATCCAAAAAA-TACGCGAGAGAAGTGTCTGCAGTTTTTATTCCACGGACAAAAAATATTTCAAACAT
TTTACAAATTTCTAGTTTCTTACTAGAGTAATAACTTGTTTTTTTCTTCATC
>chr3D_550
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------CACTGTACATA
CAGTACAAAGACCAGAAACCACATGACCCCAGCTGTGTCATGCGTGGTCGCCTTGCTACGGCTATATCCTACTGCACCAC
CTTGTAGTACATAAAACCTCCTGCATGCA----------TGCAGAGGATTAGCTTTTGGCCCCTTTGATCTTTGCAAGAA
GTTACCATGCCCTTGGCTTTATCCCTCTAGTCTAGTCTGCAGGTCTGGTGGTCTACAGTACCTAGATCAAAGTATCAAAC
ACACACATACATACAGGGAGAAACTTTTCCTTTTCACCCC-TCTAAATCCGACTTTATTCTCTCTACCCTCCCAGAAATC
ACCCTTAAAAACAAGCCGATTCCACCCCGATCCCCCCATCCATACACACCTCAGACCCC-----CCCTGATATCTAAGCA
AGAGTAATATACTGGAGCTTCCCTAGCACCTCACTATAGCTGCACCACTTCACACACACACATGGATTCCTCGCCGTCTG
ACCTAACCCTAGACTACACTCCCAACGGCAACGGCACGGCGTCTGCCGGCGGCGGCTACCCGAAGCAGGCGTCGCCGGTC
GTGGACCACCACCATCATCTCTCGGCGGAGCAGGCGACGACGCAGAAGCTGCAGGAGTTCCTGGCCCGCCTCGACGACGA
GCGGCTCAAGATCGACGCCTTCAAGCGCGAGCTCCCGCTCTGCATGCAGCTCCTCAACCAAGGTAATGAACGTGCCCAAC
TGCCCATGCATGTGTGCTTACGTGGAAGGC-GATGGAGCTCTGCCTGACTGAATAATGTATGTGTGGGTGGGTGCAGCTA
TGGAGGCGTACAGGCAGCAGCTGGAGGCGTGCCAAATGGGGAGCCATGGCGGCGCGGCGGCGAGGGCGCCGCTGGTGCTG
GAGGAGTTCATACCGCTGAAGAACATCGGGATCGACGCGGCGGAGAAGGCGGCCGGGAACGCGCCGTCGGAGAAGGCGAA
CTGGATGGTGTCCGCGCAGCTGTGGAACGGGCCGGCCGCGGGGGACGCGGCGGCCAAGGGCCCGCAGACTCCCAAGGAGC
GCTCGGAGCACCCGCTGGACACGAGCCCCATGCTCGGCGCGCTCGACGGCGGCGGCGGCAACGGCGTCGGCGCCTTCCTC
CCGTTCACCAAGGAGAAGGCCTGTATGGCGGAGAGCGCCGCGCTGCCGGAGCTCGGGCTCGCGCCCGCGGAGAAGGATCG
GGAGGCTGACAGAAAGCCGTACCACGACGACAGCGGCAGCAACGGCACTGTAGTCTCGCGGAGAGACGTCGGTGCACCAC
CGACGTCGACGGCGCCGGAAGGGCAGTCGGTGCCGCCGCCTCCGCAGACGAACCGGAAGGCCCGGCGGTGCTGGTCGCCG
GAGTTGCACCGCCGCTTCGTCAATGCCCTCCAAATCCTGGGCGGCGCTCAAGGTATACACACACAGACGTCCACATGTCA
TGATC-----TAGTAACTATTTGGATGCATCAAATTAACCTGCTGAATCTGAATGAATTACGTGTGTACCCAAGACAAAT
TCTAAATCTCCTTTGTTGTTTGCAAATTGATTAAAGTGGCGACCCCGAAGCAGATCCGAGAGCTCATGAAGGTGGATGGA
TTGACCAATGATGAGGTGAAAAGCCATCTCCAGGTAACTATAATCTCATCATCACGCATCTTGCATTCTCTCTTCGTA--
-CGTTCCAGTAATTATGCATGCTGCTGCTTTAATTATGA---GTAGAATGACTAACTGATTATTATATGAACACATGAGA
CATGG----GTGTGTATCTAAATTGAAGTTTTCGTTTTTTTTGTGTTGCGAGCAGAAGTACAGGCTACACACTCGACGGC
CGATGCCGGCACCGTCGGCGCCGCCGCCGGGGGCACCGCAGCTGGTGGTTCTCGGGGGCATATGGATGCCGCCGGACTAC
GCGGCGCAGGGGGCGGGACCGGCCGGCATCTATGGGGCGCACCCGGCGACGCAGGCGCACTACACGGCGGCGGTGTCGGC
GCAGGAGTACTACCAGAACGCAGCCGCGGCTGCCCACCACGGCCACCACATGCAGCACCACCAGGCGGCCTCTATGGTGC
ACCACCGCGCGGTGGCGCCTCCGCCCCCGCAGCCCGCCTACAAGGTGCACCCGGTGTCGGCAGCAGGGTCCCAGGGGTCG
TCGGAGGGCCGACGTAGCAGCGGCGGCGGCAGGGAGAGGTCGGAGAGCATCGAGGAGGAGGGCGAGGAGCGGGAGGACGA
GGAGGACGAGGACGAGGACGGCATGGCGGCGAACGGCGACGCCGAGCAGATCAACTACTAATTCAACGGAATAATTAAGT
AGCGCGCACCAATCAGT-----TAGCCCCTAATGATCGTACGTCCTAGCACAAGTTGGTATAACGAGATTGTTTTCTGTC
CGGAAAGTGATTTTTTGGCGCGGAGAACGGAAGCCGGTCTCTGGCTTGAGTGGAGCAGCAGGAGCCTGAGATTGTCTCAT
TCGTGATGTGATCGGTAAACGGATGGATTTGTGAGGGCTTTTCTCTCCTTCTTTTTTCTTCCCCTTC-CT--TTTGGGCT
TTGTTTTTGTGCTAGCAAATAATTTGGTAAATATGTCATGATGGAAATAT--GACTAGCTTTTGTACACTTGGTTGGAGG
AAGAGA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TAATTATTTGGGAGATTTGTGTACTGAGCTTTAGAGC------TGTGTTTGTTCCTTGAT-TTAAAGT
TTAATAAACGGTGTGAATTGTCAGTAAGCAATAATGGAAGGCCATTTCTTTAG-----TGCATAATTGATTCCAGAATTT
CTCTGATTTGTGTCATAACCTGTCTCAGTATTTTGACCTCTCGGGT--------TGATGTTCGCCTGATATCCAAAGTGA
ATTCCTTTCACTTTAGAAAGTTATTT-TTTTACTCTTTCTGCACCAAAGTTTACAAAGGTAGATGATATAACACTATAAC
TTGTTGCATATACATACAGAACTTCAACCAATTTCACATCATTTTGTAACTGCAAATGTACATTTCGCTTGTTTGATGGA
CCCATATGTTTGTATCCAAAAAATTACACGAGAGAAGTGTCTGCAGTTTTTATTCCACGGACACAATTTTTTTTAAACAT
TTTTCGAATTTCTAGTTTCTTACTAGAGTAATAACTTGGTTTTTGTCT----
>chr3A_615
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------GCTACGGCTATATCCTACTGCACCAC
CTTGCAGTACATGAAACCTCCTGCATGCATGCATATGCATGCAGAGGATTAGCTTTTGGCCCCTTTGATCTTTGCAAGAA
GTTACCATGCCCTTGGCTTTATCCCTCTAGTCTAGTCTGCAGGTCTGGTGGTCTACAGTGCCTAGATCAAAGTATCAAAC
ACACACATACATACAGGGAGAAACTTTTCCTTTTCACCCCCTCTAAATCCGACTTTATTCTCTCTTCCCTCCCAGAAATC
ACCCTTAAAAACAAGCCGATTCCACCCCGATCCCCCCATCCACACACACA--------CACACCCCTTGATATCTAAGCA
GGAGTAATATACTGGAGCTTCCCTAGCACCTCACTA--GCTGCACCACTTCACAC----ACATGGACTCCTCGCCGTCTG
ACCTAACCCTAGACTACACCCCCAACGGCAACGGCACGGCAGCTGCCGCCGCCGGCTACCCGAAGCAGGCGTCGCCGGTC
GTGGACCACCACCATCATCTCTCGGCGGAGCAGGCGACGACGCAGAAGCTGCAGGAGTTCCTGGCCCGCCTCGACGACGA
GCGGCTCAAGATCGACGCCTTCAAGCGCGAGCTCCCGCTCTGCATGCAGCTCCTCAACCAAGGTAATTAACGTGCCGAAC
TGCCCATGCATGTGTGCTTACGTGGAAGGGTGATGGAGCTCTGCCTGACTGAATAATGCATGTGTGGGTG----CAGCTA
TGGAGGCCTACAGGCAGCAGCTGGAGGCGTGCCAGATGGGGAGCCATGGCGGCGCGGCGGCGAGGGCGCCGCTGGTGCTG
GAGGAGTTCATCCCGCTGAAGAACATCGGGATCGACGCGGCGGAGAAGGCGGCCGGGAACGCGCCGTCGGAGAAGGCGAA
CTGGATGGTGTCGGCGCAGCTGTGGAACGGGCCGGCTGCGGGGGACGCGGCGGCCAAGGGCCCCCAGACTCCCAAGGAGC
GCTCGGAGCACCCGCTCGACACGAGCCCCATGCTCGGCGGGCTCGACGGCGGCGGCGGCAACGGTGTCGGCGCCTTCCTC
CCGTTCACCAAGGAGAAGGCCTGTATGGCGGAGAGCGCGGCGCTGCCGGAGCTCGGGCTCGCGCCCGCGGAGAAGGACCG
GGAGGCTGACAGAAAGCCGTACCACGACGACGGCGGCAGCAACGGCACTGTAGTCTCGCGGAGAGACGTCGGTGCACCAC
CGACGTCGACGCCGCCGGAAGGGCAGTCGGTGCCGCCAGCTCCGCAGACGAACCGGAAGGCCCGGCGGTGCTGGTCGCCG
GAGCTGCACCGCCGCTTCGTCAATGCCCTTCAAATCCTGGGCGGCGCTCAAGGTATG--CACACAGACGTCCACATG---
---------------------------CATCAAATTAACCAGCTGAATCTGAACGAACTACATGTGTACCAAAG----AT
TCTAAACCTCCTTTGTTGTTTGCAAATTGATTAAAGTGGCGACCCCGAAGCAGATCCGAGAGCTGATGAAGGTGGATGGA
TTGACCAATGATGAGGTGAAAAGCCATCTCCAGGTAATTATAATCTCATCATCACGCATCTTGCATTCTCTCTTCGTAGT
ACGTTCCAGTTATTATGCATGCTGCTGCTTTCATTATGATGAGTAGAATGATTAACTGATTATTATATGAACACATGAGA
CA----TGGGTGTGTATCTAATTTTTAGTTTTTG-----TTTGTGTTGCGAGCAGAAGTACAGGTTGCACACGCGGCGGC
CGATGCCGGCACCGTCGGCGCCGCCGCCGGGGGCACCGCAGCTGGTGGTTCTCGGGGGCATATGGATGCCGCCGGACTAC
GCGGCGCAGGGGGCGGGACCGGCCGGCATCTATGGGGCGCACCCGGCAACGCAGGCGCACTACACGGCGGCAGTGTCGGC
GCAGGAGTACTACCAGAACGCAGCCGCGGCCGCCCACCACGGCCACCACATGCAGCACCACCAGGCGGCCTCCATGGTGC
ACCACCGCGCGGTGGCACCTCCGCCCCCGCAGCCCGCCTACAAGGTGCACCCGTTGTCCGCAGCAGGGTCCCAGGCGTCA
TCGGAGGGCCGGCGTAGCAGCGGCGGCGGCAGGGAGAGGTCGGAGAGCATTGAGGAGGAGGGCGAGGAGCGGGAGGACGA
GGAGGACGAGGACGAGGACGGCATGGCGGCGAACGGCGACGCCGAGCAGATCAACTACTAATTAAGTAGC----------
-GCGCGCACCGATTAGC-----TAGCCCCTAATTAAG--------------AAGTTGGTATAACGAGATTGTTTTCTGTC
CGGAAAGTGATTTTTTGGCGCGGAGAACGGAAGCCGGTCTCTGGCTTGAGTGGAGCAGCGGGAGCCTGAGATTGTCTCAT
TCGTGATGTGATCGATATACGGATGGATTTGTGAGGGCTTTTCTCTCCTTCTTTTTTCTTCCCCTTCTCT--TTGGGGCT
TTGTTTTTGTGCTAGCAAATAATTTGGTAAATATGTCATGATGGAAATAT--GACTAGCTTTTGTACACTTG-TTGGAGG
AAGAGA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TGATTATTTGGGAGATGTGTCTACTCAGCTTTAGGGCTGGCAGTGTGTTTGTTCCTTGGTTTAAAGTT
----TAAACGGTGTGAATTGTCAGTAAGCAATGATGGAAGACTATTGTTGTAG-----TGAATAAATGGTTCCTGAATAC
CTCTCATTTGTATCGTAACCTGTCT--------TTACCTCTCGGGTAGTCGGGTGGATGTTTGCCTGATATTCAAAGTGA
ATTCCTTTCACTTTTAAAAGT--TTT-TTTTACTCTTTTTGTACGAAAGTTTACAAAGATAGATGGTATAGCACGATAAC
TGGTTGCATAT---------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
--------------S-----------------------------------------------------------------
-----S--------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S----S----------S----------------------S--S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
----------------------------------S---------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
-------S-----------------------------S------------------------------------------
--------------------------------------------------------S---------------S-----S-
-----SSSSS------------------------------------S--------------------S------------
----------S-----------------------------------------------S---------------------
--------------------------------------------------------------------------------
------------------------------------------------S-----------------------------S-
-----S--S-----------------------------------------------------------------------
----------S---S----------SS-------S-----------------S---------------------------
--------------S------S---S------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------S----S------S--------------S--------------------------------
--------------------------------------------------------------------------------
------------------------------S---------------------------------------SS--------
-------S-SSSSSSSSSSSSS----------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S---------------------------------SS--------
----------------------------------S---------------SS----------SSS-SSS-S---------
SSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS--------SS------SS--------------------------------------------------
-S-------------------------------S-----------------SSSSSSS----------------------
-----S-------S------------------------------------------------S-----------------
-------------------SSSSSSSS---------S-----------------------S-------------------
------------S--------S------S------S----------------S---------------------------
---------------------------S-----------------------------------S--SS-S---S------
---S-S--------------------------------S-----SSS-SSSS
>forward_430
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------GAGGAAGGCAGGCAGGATTT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>reverse_1440
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
GAGGAGTTCATACCGCTGA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>forward_480
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CTTCCCCTCCCCCTCTCTTT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>reverse_1977
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TCACACAGACGTCCTCATGT----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>forward_646
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TCCTACTGCACCAC
CTTGTG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>reverse_2139
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CGAGCTCATGAAGGTGGATG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>forward_1065
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----ACCCTAGACTACACGCCCAG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>reverse_2871
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TCAATTAAGT
AGCGCGCGC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
