>input_sequence_42777
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----------------------------------------ATGCGAGATGGTCTCCGGCCGCGGCGCCAGTCGCCTCCGC
CGGGCAAGGAGACGAGGGTGGCCGGTTTCGGTCCTAATACTTCCAAGAAGAGGAAGCTAGTGGGACACCAGCGCCGTGAA
GAGGTGCCGCCGGCGGCAGTGGGCCTGGATATCCACGAAGAAGTGATAGCGCCGACGCCGGGGGCGCCAGATCCGAAATC
GACGGGCAAACTGCCCGCCGGAGGGGAGGTAGACGGAGGAGCCGTGGACCGCATCAGCAACCTCCACGACGATAACCTCC
GCCACATCGTCTCCCTCCTCCCCGTCAAGGACGGCGCCCGCACCCAGATCCTCGCGTCCCGGTGGCGCCACCTCTGGCGC
TCCGCCCCTCTCAATCTCGACTACCGTGAGTTCCCCTCCGGCTGCTTGCCCCCTTACATCGATTCCCGCATTGCCGTCAT
CTCGCACATCCTTTCCTCCCACCCGGGGCCCGGCCGCCGCTTCTGCATCGAACCGTGCTACCTCCACGCCCCGGAAGCTA
CCGTCGACGCCTGGCTCCGGTCCGCCGCTCTGGACAAATTGCAGGAGCTTGAGACCGGCTCTACTATATGCATTGAC---
---------------------CCGCCGCCAGCGTCCACATTCCGCTTCTCGGCCACCCTCTGTGTTGCCACCTTGGGAAA
ATGCAGCCTCCCTGACGACATCGTCCAAGGGCTTCACTTTCCCCTCCTTAAGCAGCTCGGGCTCGATAGTGTCCGCATCA
CAGAGTTCTCGCTGGACAGCTTGATTGCCGGATGCACACCTGCTCTGGAGTGCTTGCTGATCGACCGATGCTCTGGCTTC
CGTAGCGTCCGGATCAACTCCCTTAGCCTTATAAGCATTGGTGTGCGTCCTGAATGCTATTGTGCCATCCCATTTCGG--
-------------------GAACTCATCATCGAGAATACGCCTTCTCTTGAGAGGTTGCTCCATCTTGATTTTTCCATTG
GTATCCATGTATCAATAGTCTCCGCGCCGAAGTTGCAGACCCTAGGCTGCCTTTCTGATGTCACCTTGCCTACATTTGCG
GAGAGCTTAAACGGCATTTCTGGTGGGTTTCGTAACTCAGATCAGGATCGTCTTCCCATGTTCGTGTTTGGCTCCACAGT
TATTAAGGTACCTTCCTGAAGCTTCTCAATTGCAGTGCTGTGTGTACAAAAATTGCATATCACCTGAGTTGTCCATGCAT
GAGTAATTGTTTCTTTCATTCTTGATAAAGGGACCACGTGTTGATAAGCTGACAACGGCAGTGCGGACAGTAAAGACTTT
AGCTGTACAGATGGGAACTCTTAGTCTGGATACAGTTATTGAGTTGATGAGATGCTTTCCATCCTTGGAGAAGATGTACA
TTCAGGTGAAGATTCTTCGTCGGTAACTCTTAGTTGTGTTCTCAACTGCTCTTTTGATCTACTTAGTACTTACTGATCTG
AAGTGGTTGGTTTTTA-ATTTGTCGATGTTCTTTTTCAGCCACGTTCAGAAGGGGAAAACAATGTGTGGCGTCGTAAGCA
CCGCAATTTCATCAGAAGTTTTGATATCCCTATAAAGACAATAGCATTGGAATGTTATGAGGGCTCCAAGTCTGAAGTTG
ACTTTGTCACATTCTTTGTACTGAACGCGAGACTGTTGGAGTTGATGACATTTCACATTCAGTCCCATGTTAACACGGAG
GTGTTCTTTGCAGAGCAGCGCAGGGAGCTTCAGCTGGAGAAAAAGGCTTCCAAAGGTGCCCAGTTTCATTTTACAGTCGG
TAGATGTGTCCGCAGTGTTTGGACTATGCGTCATGTACGTGATTTGGGTTTAATTGATCCATTCGCATGTTGA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr5A_1_TraesCS5A01G169800
AAAAAAGTGTCCTCCGCTTTTGTTTAGTTGAAATATGATGAAAATGTAATGAATTTGGTCTGGTTTAAATGAAATCGTCG
AATTTGCATGAAATTTTCCCGGTTTGTTCATATTCATTTTGAAATGTATATGGACGTTTGATGTGCAGGGTTGAATGTCC
GACTCCCCTAACACTGTCCGCGGCTCCGTTTTAGGGATGTGTGTTGGAGATGCCCTAATATGTGACAAATAATCAAAGAC
AAAGGGGCTGTTTGGTTCTCAGTCTAAGGTTGCCACGCCTAACCTTAGTCATGCCATAACATCTTAGGCATGTGTTTGGT
TCATTGCCACACTTGTGGCTTGCCACACTTTTCTAGTTATATGGCCCACAAGTCATAGACTCAATTTTTTGCCAAATCTT
GCCACTTATGGTGGCCATTTTGTTAGCCACACTTTTTGTGGCTGCCACGCTTTGCCTAAGGTTAGTTGTGGCAAAGTTAG
TCATGAACCAAACAGGCCCAAAGTAACGTGGAGCAACGCCAATAATCAAATGCCAGAGTAATACTCCCTTTGTTTTTTAT
ACTAACGATAATCCAACTTTATACTAACAATGACCCAACTTTAAGTTAGTATAAAAGTTGATTCATCTATAACTTTGAGT
TAGTATAAAGTTGAGTCATCTATTTTAAAACAAAGGGAGAACTAAACAAATGCCCCTCATGCCCAGCTTGTTTACCATGT
TGCAGCAGCCAGCGATGCTACAGTTACGGACAGGAGTGTTGTCACCTGGTTGGGTGGAGAGGGGCCCCACCCCTGGATTT
CAGGGTGTAGGAGTGAATTAGGAGATGCCAGATACGTTTGTAAGATTGTTTCCGTAAGCCCTGTCTGTAAGTCTATCATT
TTCGAAAAAAAACCCCTCCTCCGCTCAGCTCCGGCGAGTCCTGTCCTCTCTCCTGCTGCCCCTCCGCACCGCCCTGCCCC
TTCCGCTTCCCGAGAAACCAAACCGTAGCCTCCTTCGACCATGCGAGATGGTCTCCGGCCGCGGCGCCAGTCGCCTCCGC
CGGGCAAGGAGACGAGGGTGGCCGGTTTCGGTCCTAATACTTCCAAGAAGAGGAAGCTAGTGGGACACCAGCGCCGTGAA
GAGGTGCCGCCGGCGGCAGTGGGCCTGGATATCCACGAAGAAGTGATAGCGCCGACGCCGGGGGCGCCAGATCCGAAATC
GACGGGCAAACTGCCCGCCGGAGGGGAGGTAGACGGAGGAGCCGTGGACCGCATCAGCAACCTCCACGACGATAACCTCC
GCCACATCGTCTCCCTCCTCCCCGTCAAGGACGGCGCCCGCACCCAGATCCTCGCGTCCCGGTGGCGCCACCTCTGGCGC
TCCGCCCCTCTCAATCTCGACTACCGTGAGTTCCCCTCCGGCTGCTTGCCCCCTTACATCGATTCCCGCATTGCCGTCAT
CTCGCACATCCTTTCCTCCCACCCGGGGCCCGGCCGCCGCTTCTGCATCGAACCGTGCTACCTCCACGCCCCGGAAGCTA
CCGTCGACGCCTGGCTCCGGTCCGCCGCTCTGGACAAATTGCAGGAGCTTGAGACCGGCTCTACTATATGCATTGAC---
---------------------CCGCCGCCAGCGTCCACATTCCGCTTCTCGGCCACCCTCTGTGTTGCCACCTTGGGAAA
ATGCAGCCTCCCTGACGACATCGTCCAAGGGCTTCACTTTCCCCTCCTTAAGCAGCTCGGGCTCGATAGTGTCCGCATCA
CAGAGTTCTCGCTGGACAGCTTGATTGCCGGATGCACACCTGCTCTGGAGTGCTTGCTGATCGACCGATGCTCTGGCTTC
CGTAGCGTCCGGATCAACTCCCTTAGCCTTATAAGCATTGGTGTGCGTCCTGAATGCTATTGTGCCATCCCATTTCGG--
-------------------GAACTCATCATCGAGAATACGCCTTCTCTTGAGAGGTTGCTCCATCTTGATTTTTCCATTG
GTATCCATGTATCAATAGTCTCCGCGCCGAAGTTGCAGACCCTAGGCTGCCTTTCTGATGTCACCTTGCCTACATTTGCG
GAGAGCTTAAACGGCATTTCTGGTGGGTTTCGTAACTCAGATCAGGATCGTCTTCCCATGTTCGTGTTTGGCTCCACAGT
TATTAAGGTACCTTCCTGAAGCTTCTCAATTGCAGTGCTGTGTGTACAAAAATTGCATATCACCTGAGTTGTCCATGCAT
GAGTAATTGTTTCTTTCATTCTTGATAAAGGGACCACGTGTTGATAAGCTGACAACGGCAGTGCGGACAGTAAAGACTTT
AGCTGTACAGATGGGAACTCTTAGTCTGGATACAGTTATTGAGTTGATGAGATGCTTTCCATCCTTGGAGAAGATGTACA
TTCAGGTGAAGATTCTTCGTCGGTAACTCTTAGTTGTGTTCTCAACTGCTCTTTTGATCTACTTAGTACTTACTGATCTG
AAGTGGTTGGTTTTTA-ATTTGTCGATGTTCTTTTTCAGCCACGTTCAGAAGGGGAAAACAATGTGTGGCGTCGTAAGCA
CCGCAATTTCATCAGAAGTTTTGATATCCCTATAAAGACAATAGCATTGGAATGTTATGAGGGCTCCAAGTCTGAAGTTG
ACTTTGTCACATTCTTTGTACTGAACGCGAGACTGTTGGAGTTGATGACATTTCACATTCAGTCCCATGTTAACACGGAG
GTGTTCTTTGCAGAGCAGCGCAGGGAGCTTCAGCTGGAGAAAAAGGCTTCCAAAGGTGCCCAGTTTCATTTTACAGTCGG
TAGATGTGTCCGCAGTGTTTGGACTATGCGTCATGTACGTGATTTGGGTTTAATTGATCCATTCGCATGTTGACACTGAA
ACCAGTTTTGGCCCATTTTGGAGCTATTCTTGCTTATCAGCCTTTCTGAAAAAAAATGAGAACGAATCAATAATGGTTGC
TGCAGCCAAAGAAGAAAACTTATGTAGGTGCTCATTTTGATTCCAGTAGAAC----------------------------
--------------------------------------------------------------------------------
------------------------------------------------ATCACTAAGACTGACAGATTGATAATATGATC
TGTTGTAGTTTATCATGGTCATTTTGGCTACTTTTGCTTCAAAAAAGTAGCA-TTGGCTAGTTTTCTGATGGATATTTGC
ATGCATGG----ATGTGAAATTTAGAACATTGTATGGCAGCATATATGGATGTCCTATGTTGTTTCGTTGGGAATACTTG
TCCATCATCGGTACTAGTATGATATACTCCCCCAAAATAAGTGACTCAACTTTGTACTAGCTTTAGTACAAAGTTAGTAC
AAACTTGAGTCACTTATTTTGGGACGGAGGGAGTATACTTGAGGAGAAGAGGCGTTTTAGATTGTAAAATCTTATTCCTG
AGATTTGGATATTTGCATTGACTGCTTTGTTTGAGCATCATAACAGAAGAAACAAAATCTCACATGTAGCCTTTTTGTTT
GTCCAAGAGTGTATCATATCCATGGCTGTGTTTTCATGTTGTGTTGTTTCTGGGAGGATGTTTGGCTGCATGAT------
-GTATTTAGCATCAAGTTCCACAGCTTGGATAACATCACACCCGTAATTTCCTGCATCAGTGGCCTTGCTGAACATGTTG
GTAAACTGATCATCAAGCTGGTCGTTGGCCGTGGTCGAGAACCGCTGAGGCTTCCCATAGCAGTGGCCCTCGGTGTCCTC
GTTTGCCATGGCAAGAATCTGCGGCAAAGAATCCAAGATCCAGTGAACAGCTTGACCAAGAAGGAATTCCCCTTGTGCAG
GTTCAGGTCATGTTTCCGTAGTCTCTGGGATATCTCTTGTGGTACCGAAGTTTCTCTGTGTGCAGATTCTTTTTTTTTTG
ACCCGAAACTG-TGAGAATTTCTTCTCACGGTATATTGTTAT
>chr5D_499
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CAAAGTAATGTGGAGCAACGCCAATAATCAAATGCCAGAGTATACCATGGGGCAAATGGTCG
AATG----------------------------------------------------------------------------
-----------------------------------------------------CCTTGATGACCAGTTTGTTTACCTTGT
TGCAGCAGCATCTACACAACTCCTCCGCTCAGCTTTTCACGAAAAGAAA-------------------------------
--------------------------------------------------------------------------------
---------------CTCCTCCGCTCAGCTCCGGCGACTCCTGTCCTCTCTCCTGCTGCCCCTCCGCACCGCCCTACCCC
TTCTGCTTCCCGGGAAACCAAACCGTAGCCTCCTTCGACCATGCGAGATGGTCTCCGGCCGCGGCGCCAGCCGCCTTCGC
CGGCCAAGGAGACAAAGGCGGCCGGTTCCGGTCCTAATACTTCCAAGAAGAGGAAGCTAGCGGGACACCAGCGCCGTGAA
GAGGTGCCGACAGCGGCAGTGGGCCTGCACATCCACGGAGAGGTGCTAGCGCCGCCGCCGGGGGCGCTAGATCCGAAATC
GACGGGCAAACCGCCCGCCGGAGGGGAGGTGGACGGAGGAGCCGTCGACCGCATCAGCAACCTCCACGACGATAACCTCC
GCCACATCGTCTCCCTCCTCCCCGTCAAGGACGGCGCCCGCACCCAGATCCTCGCGTCGCGGTGGCGCCACCTCTGGCGC
TCCGCCCCTCTCAATCTCGACTACCGTGAGTTCCCCTCCGGCTGCTTGCCCCCCTACATCGATTCCCGCATTGACGTCAT
CTCGCACATCCTTTCCTCCCACCCGGGGCCCGGCCGCCGCTTCTGCATCGAACCGTGCTACCTCCACGCCCCGGAGGCTA
CCGTCGACGCCTGGCTCCGGTCCGCCGCTCTGGACAAATTGCAGGAGCTTGAGACCGGCTCTACTATATGCATTGAC---
---------------------CCGCCGCCAGCGTCCACATTCCGCTTCTCAGCCACCCTCTGTGTTGCCACCTTGGGAAA
ATGCAGCCTCCCTGATGACATCGTCCAAGGGCTTCACTTTCCCCTCCTTAAGCAGCTCGGGCTCGACAGTGTCCGCATCA
CGGAGTTCTCGCTGCACAGGTTGATTGCCGGATGCACACCTGCTCTGGAGTGCTTGCTGATCGACCGATGCTCTGGCTTC
CGTAGCGTCCGGATCAACTCCCTTAGCCTTATAAGCATTGGCGTGCGTCCTGAATGCTATTGTGCCATCCCATTTCGG--
-------------------GAACTCATCATCGAGAATACGCCTTGTCTTGAGAGGTTGCTCCATCTTGATTTTTCCATTG
GTATCCATGTATCAATAGTCTCCGCGCCGAAGTTGCAGACCCTAGGCTGCCTTTCTGATGTCACCCTGCCTACATTTGCG
GAGAGCTTAAGCGGCACTTCTGGTGGGTTTCGTAACTCAGATCAGGATCGTCTTCCCATGTTCGTGTTTGGCTCCACAGT
TATTAAGGTACCTTCCTGAAGCTTCTCAATTGCAGTGCTGTGTGTGCAAAAATCGCATATCACTTGAATTGTCCAGGCAT
GAGTAA-TGTTTCTTTCATTCTTGATAAAGGGGCCACGTGTTGATAAGCTGACAACGGCAGTGTGCACAGTCAAGACTTT
AGCTGTACAGATGGGAACTCTTAGTCTGGATACAGTTATTGAGTTGATGAGATGCTTTCCATCCTTGGAGAAGATGTACA
TTCAGGTGAAGATTCTTCTTCGGTAACTCTTAGTTGTGTTCTCAACTGCTCTTTTGATCTACTTAGTACTTACTGATCTG
AAGTGGTTGGTTTTTA-ATTTGTCGATGTTTTTTTTCAGCCACGGTCAGAAGGGGAAAACAATGTGTGGCGCCGTAAGCA
CCGCGATTTCATCAGAAGTTTTGATATCCCTATAAAGACAATAGCATTGGAATGTTATGAGGGCTCCAAGTCTGAAGTTG
ACTTTGTCACATTCTTTGTACTGAACGCGAGACTGTTGGAGTTGATGACATTTCACATTCAGTCCCATGTTTACACGGAG
GAGTTCTTTGCAGAGCAGCACAGGGAGCTTCAGCTGGAGAAAAAGGCTTCCAAAGGTGCCCAGTTTCATTTTACAGTCGG
TAGATGTGTCCGCAGTGTTTGGACTATGCGTCATGTGCGTGATTTGGGTTTAATTGATCCATTTGCATGTTGACACTGAA
ACCAGTTTTGGCCCATTTTGGAGCTATTCTTGCTTATCAGCCTATCTG-AAAAAAATGAGAACGAATCAATAACGGTAGC
TGCAGCCAAAGAAGAAAACTTATGTAGGTGCTCATTTTGATTCCAGTAGAAC----------------------------
--------------------------------------------------------------------------------
------------------------------------------------ATCACTAGGACTGACAGATTGATAGTATGATC
TGTTGTAGTTTATCATGGTCATTTTGGCTACTTTTGCTTCAAGTCA----CA-TTGGCTAGTTTTCTGATGGATATTTGC
ATGCATGCATGCATGTGAAATTTAGAGCGTTGTATGGCAGCATATATGGACGTCCTATGTTGTTTCGTCGGGAATACTTG
TCCATCGTTGGTACTACTATGATA--------------------------------------------------------
---------------------------------TATACTTGAGGAGGAGGCGTTTTATAGATTGTAAAATCTTATTCCTG
AGATTTGGATTTTTGCATTGACTGCTTTGTTTGAGCATCATAACAGAAGAAACAAAATCTCACATATAGCCTTTTTGTTT
GTCCAAGAGTGTATCATATCCACGGCTGTGTTTTCATGTTGCCTTGTTTCTGGGAGGATGTTTGGCTGCATGAT------
-GTATTTAGCATCAGGTTCCACAGCTTGGATAACATCACACCCGTAATTTCCTGCATGAGTGGCCTTACTGAACATGTTG
CTAAACTGATCATCAAGCTGGTCGTTGGCCGTGGTCATGAACCGCTGAGGCTTCCCATTTGCCAT---------------
----------GCAAGAATCTGTGGCAAAGAATCCGGGATCCAGTGAACAACTTGACCAAGAAGGAATTCCCGTTGTGCAG
GTTCAGGCCATCTTTCCTTGGTCTGTCGGATATCTCTTGTGGTACCGAAGTTTCTCTGTGTGCAGATTCTTTTTTTTTTG
GCCAGAAACTGTTGAGAATTTCTTCTCGCAGTATATTTTTAT
>chr5B_499
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CAAAGTAATGTGGAGCAACGCCAATAATCAAATGCCAGAGTATACCATGGGGCAAATGGTCA
AATG----------------------------------------------------------------------------
-----------------------------------------------------CCCTCATGACCTGTTTGTTTACCTTGT
TGCAGCAGCATCTACACAACTCCGCCGCTCAGCTTTTCACGAAAAGAAAGAAA---------------------------
--------------------------------------------------------------------------------
------------------CTCCGCTCAGCTCCGGCGACTCCTGTCTTCTCTCCTGCTGCCCCTCCGCACCGCCCTGCC--
-----CTTCCCGGGAAACCAAAACTTAGCCTCCTTCGACCATGCGAGATGGTCTCCGGCCGCGGCGCCAGCCGCCTCCGC
CGGCCAAGGAGACGAGGGCGGCCGGTTCCGGTCCTAATACTTCCAAGAAGAGGAAGCTAGCGGGACACCAGCACCGTGAA
GAGGTGCCGACGGCGGCAGTGGGCCTGCACATCCACGGAGAGGTGCTAGCGCCGCCGCCGGGGGGGCCAGATCCGAAATC
GACGGACAAGCCGCCCGCCGGAGGGGAGGTAGACGGAGGAGCCGTCGACCGCATCAGCAACCTCCACGACGATAACCTCC
GCCACATCGTCTCCCTCCTCCCCGTCAAGGACGGCGCCCGCACCCAGATTCTCGCGTCCCGGTGGCGCCACCTCTGGCGC
TCCGCCCCTCTCAATCTCGATTACCGTGAGTTCCCCTCCGGCTGCTTGCCCCCTTACATCGATTCCCGCATTGCCGTCAT
CTCGCACATCCTTTCCTCCCACCCGGGGCCGGGCCGCCGCTTCTGCATCGAACCGTGCTACCTCCACGCCCCGGAGGCTA
CCGTCGACGCCTGGCTCCGGTCCGCCGCTCTGGACAAATTGCAGGAGCTTGAGACCGGCTCTACTATATGCATTGAC---
---------------------CCGCCGCCAGCGTCCACATTCCGCTTCTCGGCCACCCTCTGTGTTGCCACCTTGGGAAA
ATGCAGCCTCCCTGACGACATCGTCCAAGGGCTTCACTTTCCCCTCCTTAAGCAGCTCGGGCTCGATAGTGTCCGCATCA
CAGAGTTCTCGTTGCACAGGTTGATTGCCGGATGCACACCTGCTCTGGAGTGCTTGCTGATCGACCGATGCTCTGGCTTC
CGTAGCGTCCGGATCAACTCCCTTAGCCTTGTAAGCATCGGTGTGCGTCCAGAATGCTATTGTGCCATCCCATTTCGG--
-------------------GAACTCATCATCGAGAATACCCCTTGTCTTGAGAGGTTGCTCCATCTTGATTTTTCCATTG
GTATCCATGTATCAATAGTCTCCGCGCCGAAGTTGCAGACCCTAGGCTGCCTTTCTGATGTCACCTTGCCTACATTTGCG
GAGAGCTTAAGCGGCATTTCTGGTGGGTTTCGTAACTCAGATAAGGATCGTCTTCCCATGTTCGTGTTTGGCTCCACAGT
TATTAAGGTACCTTCCTGAAGCTTCTCAATTGCAGTGCTGTGTGTACGAAAATCGCATATCACTTGAGTTGTCCATGCAT
GAGTAATTGTTTCTTTCATTCTTGATAAAGGGACCACGTGTTGATAAGCTGACAACGGCAGTGCGGTCAGTCAAGACTTT
AGCTGTACAGATGGGAACTCTTAGTCTGGATACAGTTATTGAGTTGATGAGATGCTTTCCATCCTTGGAGAAGATGTACA
TTCAGGTGAAGATTCTTTGTCGGTAACTCTTAGTTGTGTTCTCAACTGCTCTTTTGATCTACTTAGTACTTACTGATCTG
AAGTGGTTGGTTTTTA-ATTTGTCGATGTTCTTTTTCAGCCACGGTCAGAAGGGGAAAACAATGTATGGCGTCGTAAGCA
CCGCAATTTCATCAGAAGTTTTGAGATTCCTATAAAGACAATAGCATTGGAATGTTATGAGGGCTCCAAGTCTGAAGTTG
ACTTTGTCACATTCTTCGTACTGAACGCGAGACTGTTGGAGTTGATGACATTTCACATTCAGTCCCATGTTTACACGGAG
GAGTTCTTTGCAGAGCAGCGCAGGGAGCTTCAGCTGGAGAAAAAGGCTTCCAAAGGTGCCCAGTTTCATTTTACAGTCGG
TAGATGTGTCCGCAGTGTTTGGACTATGCGTCATGTGCGTGATTTGGGTTTAATGGACCCATTCGCATGTTGACATTGAA
ACCAGTTTTGGCCCATTTCGGAGCTATTCTTGCTTATCAGCCTATCTG-AAAAAAATGAGAACAAATCAATAATGGCAGC
TGCAGCCAAAGAAGAAAACTTATGTAGGTGCTCATTTTGATTCCAGTAGAACATCACTAGGTTGCGTACTATAGAAATGT
ATGGAAACAGCCTCTTACAGAAATGTAGGGAAAGGCTGCGTACTATAGACCCAAAGTGGTCGGACCCTTCCCTGGACCCT
GCGCAAGCGGGAGCTACATGCACCAGGTTGCCCTTTTTTTTTTAGAACATCACTAGGACTGACAGATTGATAATATGATC
TGTTATAGTTTATCATGGTCATTTTGGCTACTTTTGCTTCGAGTCA----CATTTGGCTAGTTTTCTAATGGACATTTGC
ATGCATGCATG----TGAAATTTAGAACATTGTATGGCAGCATATATGGATGTTCTATGTTGTTTCGTCGGGAATACTTG
TCCATCATTGGTACTACTATGATA--------------------------------------------------------
---------------------------------TATACTTGAGGAGAAGAGGCGTTTTAGATTGTAAAATCTTATTCCTG
AGATTTGGATATTTGCATTGACTGCTTT-TTTGAGCATCATAACAGAAGAAACAAAATCTCACATATAGCCTTTTTGTTT
GTCCAAGAGTGTATCATATCCATGGCTGTGTTTTCATGTTGCCTTGTTTCTGGGAGGATGTTTGGCTGCATGATGTACTC
CGTATTTAGCATCAAGTTCCACAGCTTGGGTAACATCACACCCGTTATTTCCTGCATCAGTGGCCTTACTGAACATGTTG
CT-AACTGATCATCAAGCTAGTCGTTGGCCGTGGTCGTGAACCGCTGAGGCTTCCCACAGCAGTGGCCCTCGGTGTCCTC
ATTTGTCATGGCAAGAATCTGGGGCAAAGAATCTGGGATCCAGTGAACAGCTTGACCAAGAAGGAATTCCCGTTGTGCAG
GTTCAGGCCAACTTTCCTTAGTCTGTCCGATATCTCTTGTGGTACCGAAGTTTCTCTGTGTGCAGATTCTTTTTTTT--G
ACCCGAAACTG-AGAGAATTTCTTCTCACAGTATATTTTTAT
>chr5D_1243
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------CGTCGACCGCATCAGCAACCTCCCCGACCCCATCCTCG
GTGAGATCGTCTCCCTCCTCCGCACCAAGGACGGCGCCCGCACCCAGATCCTCGCGTCCCGGTGGCGCCACATCTGGCGC
ACCGCGCCTCTCAACCTCGACTGCCGTCGTCTCCCCGACGAGGAGCACGGGCTCACCGGCGTGGTG--------------
-TCGCGAATCATTTCCGCCCACCCGGGGCCCGGCCGCCGGCTCCGCATCCCCGCGTATTACCTCCAGGACCGGGCAGCAA
CCGTGGACGCCTGGCTCCGGTCCCCCGCCCTCGACCAGCTTCAGGAGCTTGAGTTCTGCCATGTCTCGAACTGTCGGCCA
CGACTGCTTCGGCCGTTGGCACCGCCACCTGCCTCCACATTCCGTTTTTCACCGACCCTCCGTGTTGTCACCATCGGGAG
ATGCCTCCTCCCGGACAGCACCGTCCAAGGGCTTCACCTCCCCCAACTTAAGCAGCTGGCGCTTGAACGGGTGAGCATCT
CTGAGGGCACGCTCTGTGGCCTGATTGCCAGGTGCCCC---GCCTTGGAGTGCTTGCTGATATACTACAGCTTTGGTTTC
CAATGCGCTCGGATCAACTCCCTTAGCCTTATAAGCATAGGTGTGCGTCTGCGGCATCGTTATCTTTCTGATCATGAGAC
AGATGAGCCGCAGTTCAGAGAACTCATCATCGAGAATGCCCCTTCCCTTGAGAGGTTGCTCCGTGTCGATATACTTGATG
GCCTGCATGTATCCATAATCTCCGCGCCTAAGCTGGAAACCTTAGGTTCCCTT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr5D_2097
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TCATGATTGGCTCCACTGT
TATTCAGGTATGCCCTGTGGT-TTCTCAGTTGCATTTCTATGTGCAGAAAAATTGCCTATCACCTGACCTGTGCACTGGC
CTAATATTGTGGCTTTCATACTTGATAAAGGGATTGCGTGTTGATAACCTGATAACAGTGGTACAAACTGTCAAGATTTT
GGCTCTTGATATGCACAATCTTAGTTTGGATACTGTTATTGAGTTGATGAGATGCTTTCCATGCTTGGAGAAGTTGCACA
TTCAGGTGATGATTCTTCATTAATGGTTCAGCAACCT--------------TTTTGATCTACTGT--------TGGTCTG
AACTTGTTGTTTTGATTATTTGTATATGTTCTTTCAGTCATTTCAATCAAGACCGGGGAATT--TGTGGCGTCGTAAACA
CCGGAATCTGTTAAGATGTTTTGACATGAGTCTGAAGACGTTAGTGTTACAACTATATCGGGGGAAGAAGTCGCAGATTA
ACTTTCTTACATTCTTTGTATTGAATGCGAAAGTGCTAGAGTCAGTGACACTTGGCATCACAACCAGGAATAACAATGAG
AAGTTCTTGGCAGAACAACGCAGGAAGCTTGAGCTGGAGAACAGGGTTTCCAGAGATGCTCAGTTTCATTTTATAACAGG
TAGTTGTGTCCGCAGTTCTTATGATATCAAGCATATTGGTGATTTGGATTTAACTGATCCATTCGCA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS--------S---------------------------------SSS-SSSSSSSSSS-SS-SS
-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S----S---------S---
---------SSSSSSSSSSSSSS-SSSSSSSSSSSS-SSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS----------------------S------------------------------------------
---S--------S---------------------------------------------------------S---------
---S--------------S--------S--------------------------------S-------------------
---------S-----------------S-S-------S---S---S--------S-------------------------
-----------S---------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
-------------------------------------------S----S----------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
------------------------------------------SSS-SSSS------------------------------
-------S------------------------------------------------------------S-----------
--------S-------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------
-----------------------------------------------------------------S--------------
-----------------------------------------SS-------------------------------------
-------------------------------------------------------------------S------------
S------------------------------------S------------------------------------------
S----S---------------S------------SS-----------------------------------S--------
-------S---S-----S------S-S-----------------------------------------------------
-----------------------------S-------S----
>forward_765
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------ACGGACAGGAGTGTTGTCAC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_1775
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GACAGCTTGATTGCCGGATG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>forward_774
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AGTGTTGTCACCTGGTTGGG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_2091
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------ACGGCATTTCTGGTGGGTTT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>forward_1175
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------CGAAGAAGTGATAGCGCCGA-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_2958
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TGC
TGCAGCCAAAGAAGAAA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
