>input_sequence_42714
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ATGCGGAGAGCCCTCCGCCACCGCCCGCGCCTCCAGCCCCCCGCTCAAACACCGCCGGCGCCGACCTCCCCTCTCCCATG
GTACGCCGCACCGCGGGCGCCGCCATCGCATTCGCCGTCCACGACCGAGGCCGACCCCCTGATCGTCGCCGCCTCCGAAG
TCGCGCTCACTTTGCCAGTCCACCCCGCCCCGCTCCCGGCCACGGCGCCGGCGCCGCTCCTGCGCCTCCTCCCCGCCTTC
ACCTCCGCCCACTTCCTCTCAATCCTCCGCTCCAACCCCCTCTCCCTCCCGCCGCTCCCGCTCCTCTCCCTCTTCCGCCT
ACTTCTTCTCGCTTCCCCTCCCGGCCTCTTCCGCCACACGCCCTCCTCCTTCCTCTCCATGTCCCACCTCCTCCTCCTCC
ACCGCCTCCCGGACCTCGCTCGCCCGCTCCTCCGCCTCCTAGTCTCCCGACTCGGCCGCTCCTCTCCGCCGCGCCTCCTC
CCACTCCTCGTCCCCGCTGCCTCCCCCGGAGACCCCGCCCCTCTCGTCTCCGAACTCGCTGCGGCGTACGCCGACGAGGG
CCTCCTCGCCGACGCCTGCTCCCTCGTCCTCCTCGCCCTCCGCGGCGGCACCCGCCTACCGCCGCCCGTGTGTTTCGGCC
TCATGAGCCGGCTCCCCACTACCCCCGAAGCATACGCTTTCTACCTGCAGCTGCTTGACGCCGGCATGACCCCGGAGGTC
AGGCAGTTCAACGTGCTGATGCGAGATTTTGTGAGACTTGGAGACCTTGCGAGTGCGCGCAAGGTGTTCGACGAAATGCG
AACCAGGGGCGTGCAGCCGACTGTGGTCAGCTTCAACACCTTGATTTCAGGCATGTGCCGAGCGCGCGATCTGGACGGTG
TAGACGGGCTGTACAAGGGAATGGCGCAGATGGGTATCACACCTGATGCCTACACTTACAGTGCTCTGATAAAGGGTTTG
TCCAGTTCAGGGAGGATGGAGGATGCAACAATGATGTTTGGTGAAATGCGCGAGAGAGGCGTGAAACCCAATGCCATTGT
GTTCACAACATTGATCGATGCGCATTGCAAGGATGGGAATGTGAAGGCTGGAATGGACTTGTACCAGGACATGAGGGCAA
GGGGTGTGATGCCAGATTTGGTGGCATACAATGCACTGGTGAATGGGCTTTGTCGGGCGAGAAATTTTGAGGCTGCCGAA
TGCATTGTGGAAGAGATGAGGGGTACAGGTCTGAAGCCAGATAAGATGACTTACACCACACTCATCGATGGTTCCTGCAA
GGACGGCAAGCTAGACACAGCGATGGATATTAAGCAGAAAATGGCGGAAGAAGAGGTTGCGTTGGATGAGGTGACATATA
CGGCACTCATCTCCGGGCTGAGCAAGGCAGGACGGCCAGTCGATGCCGAGAGGGTCCTTGTTGAGATGATGGAAGCTGGT
TTGGAGCCTGACAACACGACCTACACAATGGTGATTGACGCCTTCTGTAGGAAAGGCGACGTGAAGACAGGCTTTAAACT
ACTGAAGGAGATGCAGAACAAGGGTCGAAAACCAGGAGTTGTGACATACAACGTGATTATGAGTGGCCTCTGCAAGCTGG
GGCAGCTGAAGAATGCCGACATGCTTCTGAATGCAATGCTCAATATAGGGGTGTCCCCAGATGATATCACATACAACATT
CTCTTGGATGGGCAGTGCAAGCATGGAAAAGTTACTGATTCTGAAGAGCTGAAAAGTGCAACCGGAATGGTGCCAGATTT
TGGCGTTTATACTTCACTGATCAGCGAACTTGTCAAGAAGAAACCAGCCAAGAGCTACCACGATAGATAA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----
>chr2D_1_TraesCS2D01G326200
AAATATTGAACAAGTATTTTAAAGATGTTGAACAAATATTTGAAAACTGTTGAATAGGTATTTGAAAAATATTAAAGAAT
CATTTAAAAAAATGTTGATCATGTATATAAAAATGTTAATCAAGCATTTGCAAAAAATGTTGAACAAGTATTTGAAAAAA
TATTAACATTTAGTT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------AATATTTGTTGAACACTGAGGCTTTATAATGAAAAATTCACTATGTGAGTTTAGATCGATGGA
TCTGATATGGCGGCGCATGTATCATCCTTTCTTGAAGGTGTTCACTTTGAAGCAATGATGACACATGTTTTCTGAAGTGA
TCAAAACCCTCAATATGTGCTACTCCAATTAACTATTGCTAGACAATAGTTGCTAGGCCTTCAAGTACAAGAAAATATAG
TAAGGGGTAACTTGCCCCTTAGTTGAGAAACAGAGGTATTAGGCTACACTTCACTACAATTAAAAGTCTAGCCATCTATT
CAGCAGATAGATGGGTGCATGCACCTGTCGGCCTAGAGAAAATAGACTGGGTGCCAATCGGCTAGTAGTGGGCCGATTGG
GGCCAATCGGCCGGCAATGGGCCGACT----GCCAATCGGCCGGCAGTGGGCCGACTGGAGGCCATCAGCAGTAGGCCAA
CTGGGTAATATTAAAAAAAAA-------TACGGTGTAATATTTCTGAAATTTAATATAAAAA-TGTATTATTTACAAAAT
ATTAGCTGGGTTAACGGCAGTCTCGGGAGGTGCTGACGCGAGGTATTCGGCTTCAGGTGTGTTTGCTTTGTACCTTTGAA
CTTTGCACTGACAATATGGTTGTGTGC----------GCTGAGGCCGGGGGTTGCTCCACTTTTCCGAATAAAAAACAGA
AAGAAAAAAACAGT---------------AAGATTGATCGACTGTTCCCTAAAAAAAAGTTTGATCGACCGAGCCGTCCC
ATCTTTCTAACTTGGCGGGCTCGAAGCTCACTAGCCACGGAGGCTCATTCTCTCCGACCCC-ACCCCACCGCTCGCAAAC
ATGCGGAGAGCCCTCCGCCACCGCCCGCGCCTCCAGCCCCCCGCTCAAACACCGCCGGCGCCGACCTCCCCTCTCCCATG
GTACGCCGCACCGCGGGCGCCGCCATCGCATTCGCCGTCCACGACCGAGGCCGACCCCCTGATCGTCGCCGCCTCCGAAG
TCGCGCTCACTTTGCCAGTCCACCCCGCCCCGCTCCCGGCCACGGCGCCGGCGCCGCTCCTGCGCCTCCTCCCCGCCTTC
ACCTCCGCCCACTTCCTCTCAATCCTCCGCTCCAACCCCCTCTCCCTCCCGCCGCTCCCGCTCCTCTCCCTCTTCCGCCT
ACTTCTTCTCGCTTCCCCTCCCGGCCTCTTCCGCCACACGCCCTCCTCCTTCCTCTCCATGTCCCACCTCCTCCTCCTCC
ACCGCCTCCCGGACCTCGCTCGCCCGCTCCTCCGCCTCCTAGTCTCCCGACTCGGCCGCTCCTCTCCGCCGCGCCTCCTC
CCACTCCTCGTCCCCGCTGCCTCCCCCGGAGACCCCGCCCCTCTCGTCTCCGAACTCGCTGCGGCGTACGCCGACGAGGG
CCTCCTCGCCGACGCCTGCTCCCTCGTCCTCCTCGCCCTCCGCGGCGGCACCCGCCTACCGCCGCCCGTGTGTTTCGGCC
TCATGAGCCGGCTCCCCACTACCCCCGAAGCATACGCTTTCTACCTGCAGCTGCTTGACGCCGGCATGACCCCGGAGGTC
AGGCAGTTCAACGTGCTGATGCGAGATTTTGTGAGACTTGGAGACCTTGCGAGTGCGCGCAAGGTGTTCGACGAAATGCG
AACCAGGGGCGTGCAGCCGACTGTGGTCAGCTTCAACACCTTGATTTCAGGCATGTGCCGAGCGCGCGATCTGGACGGTG
TAGACGGGCTGTACAAGGGAATGGCGCAGATGGGTATCACACCTGATGCCTACACTTACAGTGCTCTGATAAAGGGTTTG
TCCAGTTCAGGGAGGATGGAGGATGCAACAATGATGTTTGGTGAAATGCGCGAGAGAGGCGTGAAACCCAATGCCATTGT
GTTCACAACATTGATCGATGCGCATTGCAAGGATGGGAATGTGAAGGCTGGAATGGACTTGTACCAGGACATGAGGGCAA
GGGGTGTGATGCCAGATTTGGTGGCATACAATGCACTGGTGAATGGGCTTTGTCGGGCGAGAAATTTTGAGGCTGCCGAA
TGCATTGTGGAAGAGATGAGGGGTACAGGTCTGAAGCCAGATAAGATGACTTACACCACACTCATCGATGGTTCCTGCAA
GGACGGCAAGCTAGACACAGCGATGGATATTAAGCAGAAAATGGCGGAAGAAGAGGTTGCGTTGGATGAGGTGACATATA
CGGCACTCATCTCCGGGCTGAGCAAGGCAGGACGGCCAGTCGATGCCGAGAGGGTCCTTGTTGAGATGATGGAAGCTGGT
TTGGAGCCTGACAACACGACCTACACAATGGTGATTGACGCCTTCTGTAGGAAAGGCGACGTGAAGACAGGCTTTAAACT
ACTGAAGGAGATGCAGAACAAGGGTCGAAAACCAGGAGTTGTGACATACAACGTGATTATGAGTGGCCTCTGCAAGCTGG
GGCAGCTGAAGAATGCCGACATGCTTCTGAATGCAATGCTCAATATAGGGGTGTCCCCAGATGATATCACATACAACATT
CTCTTGGATGGGCAGTGCAAGCATGGAAAAGTTACTGATTCTGAAGAGCTGAAAAGTGCAACCGGAATGGTGCCAGATTT
TGGCGTTTATACTTCACTGATCAGCGAACTTGTCAAGAAGAAACCAGCCAAGAGCTACCACGATAGATAAGGTTTCTGGG
TAAAGACATCTTATGAGTACTTCCTTACCAGTAGAGAACCATCGGTCTCCGAGAACCGAGATAGAAAAATGCAATATGAT
TAGGCTCTGCAAGTTTAGGCAGACAAATATTGCTA-TCCACTCCTCGATGGGGGATG-CTACTTCGCAGCGTAGCATGGG
GAAAGCCTACATGCTAGATGGTCTTTTGGTTTTGTAATTTTACTTATCTGATTAGTAAATAAATAAGATGGTGACAGTTG
TTTACTTGAAAATTGAATTCTGAGACGCCTTGAGCAATTT-TTTTAGCAGTATTGGTTGCTTATAGGGTTCAAATGATTC
TCCTTGCTCAGGCAACTCTACTCTCTCAGGC--TGGGTTGATAGTTGAAAAACCTGAAATCATCGTAAGGCATATTCTAT
GAATTTTTTTTTATCAATA------TTCTATGATTATGTTCTAGCTCATGGCTTCTTCTATTTAAACCTAGTTGTGGTAG
AACAGTAACTTCCATAAGTTTACCCAT------------------------------------------AGAGTCCCAGT
CTGCATAAAAACGTGTGCTTGATATGGTCAGTTATGTTGGTTTCAGTCCAAGATGGACTTTTGCGCTAATTTCACTTTAC
TTGACATCT--CATCTCAGTTCAGCTTACATGGAGCTAGTACGCAAGTATTTTATCCTCGCAACAATTATTCATGACTAC
ATGTAAGGTAAGAGCTCTACTCCATTTTTAGATAAAGGAGGAACAGACTAGCTTCATCTGCAACTGATTGCAATGTAATA
CTGTATAATGCTTTGTTCAAAGAAGCAAATTCACATCTGTTCTGAATTCATTGCAGGCTAGTGAAAAGTTTGGATACAAG
TGCACCCCATAAGATTATCTAGCTTGCACAGCCTTCGCCATCCCGTATGCCGCAGCAGAAGCAACAGCACCGATAATAGT
AGTCTGGACAGCGCTAAGGAACGGGCGGTTCCCAGTAAACCGACCCTTGATGTAGCCAAAGAAAAGGAGCGCGAGCAGCG
TTACT
>chrUn_1
AAATATTGAACACATATTTTAAAGATGTTGAACAAATATTTGAAAACTGTTGAATAGGTATTTGAAAAATATTAAAGAAG
CCCTTAAAAAAATGTTGATCATGTATATAAAAATGTTAATCAAGCATTTGCAAAAAA-GTTGAACAAGTATTTGAAAAAA
TATTAATCATTTATATAAAAATGTTGAACAAGTATTTATAAAAATGTTGATCATGTATATAAAAATATTGAACAAGTATT
TGAAAAAATGTTTAACATCTGGAAGCTGGTGGGGTAGTTATTAGCTGCGTTGGGATCGAAGCCTGGTCTCCATGGCAATC
ACCAATGCAGCTAACCACCCCATTAATTTCCAGTTACTGGTTAGAAAAGGGACCGTGACCAACTAGAGGTGACTGAGCCG
GTCTTCTCCGTTATTTCTTTCTTTTTTTATTTTCTTTCTATATTATTTTTTCAAATACTTGTTCAAAAAAAATTAAACAC
TTGTTCATATTTTTTCAAATACTTGTTTAACATTTTTTTCAAATACTTGTTCAATATTTTTTCAAATACTTCTTCATCAT
TTTTCAAATACTTCTTCAACATTTTTCAAATAC-----------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CTATT
CAACAGATAGATGGGTGCATGCACCTGTCGGTCTAGAGAAAGTAGACTGGGTGCCAATCGGCCAGTAGTGGGCCGACTGG
GGCCAATCGGCCAGCAGTGGGCCGACTGGGGGCCAATCGGCCAGCAGTAGGCCGACCACTCGG--TCAGCAATAGGCCAA
CTGGATAGTATTTTAAAAAATATATAATTACGGTATAATATTTCTGAAATTTAATATAAAAAATGTATTATTTAAAAAAA
ATTAGC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----
>chr2B_736
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------GTGGTGACGCCAGGTATTCGGCTTCAGGTGTGTTTGCTTTGTACCTTTAAA
CTTTGCACTAATAATACGTTTGCGTGGATCACTCTATGCAGAGGCCGGGGCTTGCTCCACTT-----AAAAAAAAACAAA
AACAAAAAACCAGTAAAGATGACCTTGTAAAGATTGATCGACCGTTCCCTAAAAAC-AGATTGATCGACCGAGCCGTCTC
ATCTTTC-AACTTGGCGGGCTCGAAGCTCACT--CCACGGAGTCTCATTCTCTCCGTCCCC-ACCCCACCGCTCGCAAAC
ATGCGGAGAGCCCTCCGCCACCGCCCGCGCATCCAGCCGCCCACTGAAACACCGCCGGCGCCGTCCTCCCCTCTCCCCTG
GTACGCCGCACCGCGGGCGCCGCCATCGCATTCGCCGTCCACGACCGAGGCCGACCCCCTGATCGTTGCCGCCTCCGAAG
TCGCGCTCACTCTGCCAGTCCACCCCGCCCCGCTCCCGGCCACGGCGCCGGCGCCGCTCCTGCGACTCCTCCCCGCCTTC
ACATCCGCCCACTTCCTCTCCCTCCTACGCTCCAACCCCCTCTCCCTCCCGCCGCTCCCGCTCCTCTCCCTCTTCCGCCT
ACTTCTTCTCGCTTCCCCTCCCGGCCTCTTCCGCCACACGCCCTCCTCCTTCCTCTCCATGTCCCACCACCTCCTCCTCC
ACCGCCTCCCGGACCTCGCTCGCCCGCTCCTCCGCCTCCTAGTCTCCCGACTCGGCCGCTCCTCTCCGCCACGCCTCCTC
CCTCTCCTCCTCCCCGCTGCCTCCCCCGGAGACCCCGCCCCTCTCGTCTCCGAACTCGCTGCGGCCTACGCCGACGAGGG
CCTCCTCGCCGACGCCTGCTCCCTCGTCCTCCTCGCCCTCCGCGGCGGCACCCGCCTACCGGCGCCCGTGTGTTTCGGCC
TCATGAGCCGGCTCCCCACTACCCCCGAAGCATACACTTTCTACCTGCAGCTGCTTGACGCCGGCATGCCCCCGGAGGTC
AGGCAGTTCAACGTGCTGATGCGAGATTTTGTTAGATTTGGGGACCTTGCAGGTGCACGCAAAGTGTTCGACGAAATGCG
AACGAGGAGCGTGCAGCCGACTGTGGTCAGCTTCAACACCTTGATTTCAGGCATGTGTAGAGCGCGCGATCTGGACGGTG
TAGACGAGCTGTACAAGGGAATGACGCAGATGGGTATCAAACCTGATGTCTACACTTACAGTGCTCTGATAAAGGGTTTG
TCCAGTTCAGGGAGGATGGATGATGCAACAATGATGTTTGGTGAAATGCGCGAGAGAGGCGTGAAACCCAATACCATTGT
GTTCACAACATTGATTGATGCACATTGCAAGGATGGGGATGTGAAGGCTGGAATGGACTTGTACCAGGATATGAGGGCAA
GGGGTGTGATGCCAGATTTGGTGGCATACAATGCACTGTTGAATGGGCTCTGTCGGGCGAGAAATTTTAAGGCTGCCGAA
TGCATTGTGGAAGAGATGAGGGGCACAGGTCTGAAGCCAGATAAGGTGACTTACACCACACTCATCGATGGTTGCTGCAA
GGATGGCAAGCTAGACATGGTGATGGATATCAAGCAGAAAATGGTGGACAAAGAGGTTGCGTTGGATGAGGTGACATATA
CAGCACTCATCTCCGGGTTGAGCAAGGCAGGACGGCCAGTCGATGCCGAGAGGGTCCTTGTTGAGATGATTGAAGCTGGT
TTGGAGCCTGACAACACGACCTACACGATGGTGATTGACGCCTTCTGTAGGAAAGGCGACGTGAAGACAGGCTTTAAACT
ACTGAAGGAGATGCAGAACAAGGGTCGAAAACCAGGAGTTGTGACATACAACGTGATTATGAGTGGCCTCTGCAAGCTGG
GGCAGCTGAAGAATGCCGACATGCTTCTGCATGCAATGCTCAATATAGGGGTGTCCCCAGATGATATCACATACAACATT
CTCTTGGATGGGCAGTGCAAGCATAGAAAAGTTACTGATTCTGAAGAGCTGAAAAGTGCAAAAGGAATGGTGCCAGATTT
TGGCGTTTATACTTCACTGATCAGCGAGCTTGTCAAGAAGAAACCAGCCAAGAGCTACCACGATAGATAAGGTTTCTGGG
TAAAGGCATCTTATGAGTACTTCCTCACCAGTAGAGAACCATCGGTCTCCGAGAACCGAGATAGAAAAATGCAATATGAT
TAGGCTCTGCAAGTTTAGGCAGACAAATATTGCTACTCCACTCCTCGATGGGGGGATACTACTTCGCAGCGTAGCATGGG
GAAAGCCTACATGGTAGATGGTCTTTTGGTTTTGTAATTTTACTTATCTGATTAGTAAATAAACAAGATGGTGACAGATG
TTTACTTGAAAATTGAATTCTGAGACGCCTTGAGCAAAAA-TTTTAGCAGTATTGGTTGCTTATAGGGTTCAAATGATTC
TCCTTGCTCAGGCAACTCTA--CTCTCAGGC--TGGGTTGATAGTTGAAAAACCTGAAATCATCATAAGGCATATTCTAT
GATTTTTTTA-TATTAATA------TTCTATGATTTTGTTCTAGCTCATGGCTTCT---ATTTAAACCTAGTTGTGGTGG
AACAGTAACTTTCATAAGTTTA-----------------------------------------CCCAATAGAGTCCGAGT
CTGCATAAAAACGTATGCTTGATATGGTCAGTTATGTTGGTTTCAGTCCAAGATGGACTTTTGCACTAATTTCACTTT--
-----ATCT--CATCTCAGTTCAGCTTACATGGAGCTAGTACGCAAGTATTTTATCCTCGCAACAATTATTCATGACTAC
ATGTAAGGTAAGAGCTCTACTCCATTTTTAGATAAAGGAGGAACAGGCTAGCTTCATCTGCAACTGATTGCAATGTAATA
CTGTATAATGCATTGTTCAAAGAAGCAAATTCACATCTGTTCTGAATTCATTGCAGGCTAGTGAAAAGTTTGGATACAAG
TGCACCCCATAAGATTATCTAGCTTGCACAGCCTTCGCCATCCCGTATGCCGCAGCAGAGGCAACAGCACCAATAATAGT
AGTCTGGACAGCGCTGAGGAACGGGCGGTTCCCAGTAAACCGACCCTTGATGTAGCCAAAGAAAAGGAGCGCGAGCAGCG
TGACT
>chr2A_871
--------------------------------------------------------------------------------
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-----------------------------AAGATTGATCGACCGTTCCCTAAAAAA-AGATTGATCGACAGAGCCGTCCC
ATCTTTC-AACTTGGCGGGCTCGAAGCTCACTAGCCACGGAGGCTCATTCTCTCAGACCCCCACCCCACCGCTCGCAAAC
ATGCGGAGAGCCCTCCGCCACCGCCCGCGCCTCCAGCCCCCCACTGAAACACCGCCGGCGCCGTCAGCCCCTCTCCCATG
GTACGCCGCGCCGCGGGCGCCGCCATCGCATTCGCCGTCCACGACCGAGGCCGACCCCCTGATCGTTGCCGCCTCCGAAG
TCGCGCTCACTCTGCCAATCCACCCCGCCCCGCTCCCGACCACGGCGCCGGCGCCGCTCCTGCGCCTCCTCCCCGCCTTC
ACCTCCGCCCACTTCCTCTCCCTCCTCCGCTCCAACCCCCTCTCCCTCCCGCCGCTCCCGCTCCTCTCCCTCTTCCGCCT
ACTCCTTCTCGCCTCCCCTCCCGGCCTCTTCCGCCACACGCCCTCCTCCTTCCTCTCCATGTCCCACCTCCTCCTCCTCC
ACCGCCTCCCGGACCTCGCTCGCCCGCTCCTCCGCCTCCTAGTCTCCCGACTCGGCCGCTCCTCTCCGCCGCGCCTCCTC
CCACTCCTCGTCCCCGCCGCCTCCCCCGGAGACCCCGCCCGTCTCGTCTCCGAACTCGCTGCGGCCTACGCCGACGAGGG
CCTCCTCGCCGACGCCTGCTCCCTCGTCCTCCTCGCCCTCCGCGGCGGCACCCGCCTACCGGCGCCCGTGTGCTTCGGCC
TCATGAGCCGGCTCCCCACCACTCCCGAAGCATACGCTTTCTACCTGCAGCTGCTTGACGCCGGCATGCCCCCTGAGGTC
AGGCAGTTCAACGTGCTGATGCGAGATTTTGTTAGATTTGGAGACCTTGCGAGTGCGCGCAAGGTGTTCGACGAAATGCG
AACCAGGAGCGTGCAGCCGACTGTGGTCAGCTTCAACACCTTGATTTCAGGCATGTGTAGAGCGCGCGATCTGGACGGTG
CAGACGAGCTGTACAAGGGAATGGCGCAGATGGGTATCACACCTGATGTCTACACTTACAGTGCTCTGATAAAGGGTTTG
TCCAGTTCAGGGAGGATCGAGGATGCAACAAAGATGTTTGATGAAATGCGCGAGAGGGGCGTGAAACCGAATGCCATCGT
GTTCACAACATTGATCGATGCACATTGCAAGGCTGGGGATGTGAAGGCTGGAATGGAATTGTACCAGGACATGAGGGCAA
GGGGTGTGATGCCAGATTTAGTGGCATACAATGCACTATTGAATGGGCTTTGTCGGGCGAGAAATTTTGAGGCTGCCGAA
TGCATTGTGGAAGAGATGAGGGGCACAGGTCTGAAGCCAGATAAGGTGACTTACACCACACTCATTGATGGTTGCTGCAA
GGACGGCAAGCTAGACACGGCGATGGATATTAAGCAGAAAATGGCGGACGAAGAGGTTGCGTTGGATGAGGTGACATATA
CAGCACTCATCTCCGGGTTGAGCAAGGCACAACGGCCAGTCGATGCCGAGAGGATCCTTGTTGAGATGATGGAAGCTGGT
TTGGAGCCCGACAACACGACCTACACCATGGTGATTGACGCCTTCTGTAGGAAAGGCGACGTGAAGACAGGCTTTAAACT
ACTGAAGGAGATGCAGAACAAGGGTCGAAAACCAGGAGTTGTGACATACAACGTGATTATGAGTGGCCTCTGCAAGCTGG
GGCAGCTGAAGAATGCCGACATGCTTCTGAATGCAATGCTCAATATAGGGGTGCCCCCAGATGATATCACATACAACATT
CTCTTGGATGGGCAGTGCAAGCATGGAAAAGTTACTGATTCTGAAGAGCTGAAAAGTGCAAAAGGAATGGTGCCAGATTT
GGGCGTTTATACTTCACTGATCAGCGAACTTGTCAAGAAGAAACCAGCTAAGAGCTACCACGATAGATAAGGTTTCTGGG
TAAAGACATCTTATGAGTACTTCCTCACCGGTAGAGAACCATCGATCT-------CCGAGATAGAAAAATGCAATATAAT
TAGGCTCTTCAAGTTTAGGCAGACAAATATTGCTACTCCACTCCTCGATGGGGGATACATACTTCGCAGCGCGGCATGGG
GAAAGCCTACATGCTA-------------TTCTGTAATTTTACTTCTCTGATTAGTAAATAAATAAGATAGTGGCAGATG
TTTACTTGAAAATTGAATTCTGAGGCGCCTTGAGCTTTTTCTTTTAGCAGTATTGGTTGCTTATAGTGTTCAAATGATTC
TCCTTGCTCAGGCAACTCTA--CTCTCTCAGCTTGGGTTGATAGTTCAAAAACCTGCAATCGTCGTAAGGCATATTCTAT
GATTTTGTTC-TAACTCATGGCTTCTTCTATGATTTTGTTCTAACTCATGGCTTCTTCTATCTAAATCTAGTTGTGGTAG
AACAGTAACTTTCATAAGTTTACCCCGCAAAAAAATAAGTAACTTCCATAGACCATAAGTTTACCCATAAGAGTCCCAGT
CTGCAGCAAAACGTGTGCTTGATATGGTCAGTTATGTTGGTTTCAGTCCAAGATGGACTTTTGTGCTAATTTCACTTT--
-----ACTTGACATCTCAGTTCAGCTTACATAGAGCTAGTTCGCAAGTATTTTATCCTCGCAACAATTATTCATGACTAC
ATGTAAGGTAAGAGCTCTACTCCATTTTTAGATAAAGGAGGAACAGACTAGCTTCATCTACAACTGATTGCAATGTAA--
---TATAATGCATTGTTCAAAGAAGCAAATTCACATCTGTTCTGAATTCATTGCAGGCTAGTGAAAAGTTTGGATACAAG
TGCACCCCATAAGATTATCTAGCTTGCACAGCCTTCGCCATCCTGTACGCCGCAGCAGAAGCAACAGCACCAATAATAGT
AGTCTGGACAGCGCTAAGGAACGGGCGGTTCCCAGTAAATCGACCCTTGATGTAGCCAAAGAAAAGGAGCGCGAGCAGCG
TGACT
>SNPs
------------SS-----------------------------------------------------------------S
-SS------------------------------------------------------S----------------------
------SSS--SS-S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S-----S----S-SSSSSSSS---S-SSSSS-S-SSS-S-SSS-S-SSSSS-SS--SSS
-S-SSS-SSS-SS-SSSSSS--SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
--S----------------------------S---------S--------------------S-------------S---
------------S---S-------------------------S-----S-------SSSSS-SSS------S--------
----S--S----SS------S-------------S---------------------------------------S----S
------SSSSSSSSSSSSSSSSSSSSSSS---S------S-------------------------------------S--
---------S-S----S-S---S---S------------S----------S-----------SSSSS--S--------S-
--S------S--------------------------------S-------------S--S--------------------
-------S------------------------------------------------------------------------
------------------------------------------S--S-----------------S----------------
------------------------------------------------------------------S-------------
-----------S--------------------------------------------------------------------
--------------------SS----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------S-----------
--------------------------------S---S-------------------------------------------
-------S-------------------------------------------------SS---------------------
------S-----------------------------------------S-------------------------------
--------------------------------------------------------------------------------
---------------------S---------------S------------------------------------------
--------------------------------------S-----------------------------------------
-----------------------S---------------------S---------------------------S------
------------------S-----------------------------S-------------------------------
-S---------------S--------------------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------SS-----------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------S-----------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------SS----------------------------------------------------------
--S------SS------------------------S--------------------------------------------
-----------S-------------SS-----------------------------------------------------
------------------------------------------------------------------------------SS
SSSSS---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
-S---
>forward_584
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ATATGGCGGCGCATGTATCA--------------------------------------------------------
--------------------------------------------------------------------------------
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-----
>reverse_2113
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------GAGACTTGGAGACCTTGCGA----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>forward_1062
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--TAGCTGGGTTAACGGCAGTC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----
>reverse_2117
--------------------------------------------------------------------------------
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------------------------------------CTTGGAGACCTTGCGAGTGC------------------------
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>forward_1069
--------------------------------------------------------------------------------
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---------GTTAACGGCAGTCTCGGGAG---------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2689
--------------------------------------------------------------------------------
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------------------------------------------------AGAAGAGGTTGCGTTGGATGA-----------
--------------------------------------------------------------------------------
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>forward_2247
--------------------------------------------------------------------------------
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-------------------------------------------------------------------GATCTGGACGGTG
TAGACGG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>reverse_3102
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CCGGAATGGTGCCAGATTT
TG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>forward_2827
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CCTGACAACACGACCTACACA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>reverse_3842
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TGACATCTCATCTCAGTTCAGCT--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
