>input_sequence_42665
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-ATGAACATTTTCTCTTTGCTATTGCAGTTGTGTATAGCTCTATGTGTCGGCACAAACAGCAGTGCATGGTTGGGAACTG
CGGCGCTTGTGACCAACATGAGGAACTTCCCTCTGAGTCGAGGAACCGTTGCTGGTCTCATCAAAGGTTATGTTGCTGTT
AGTGCTGCTGTCTACACGGAAACGTTCAATGGAATGCTTAACAATTCACCCACAAACCTTTTGCTATTGCTTGCTTTGGG
GATCCCGGTAGCATGTGTTGTGGTGATGTATTTTGTTAGGCCCTGCACCCCATCACTGGATGAGGATAATGCAACCGAAC
ACAGCCACTTCGTGTTCACACAGGTCTCTAGTGTGGTTCTCGGCGTATATCTTATGGTGGCTACAATACTCGGCGATACT
TTGAACCTAAGCGCGACTATCACCTACCTTTTGTTTGGTATAATGATACTCCTGCTCCTTTCTCCACTTGCCATACCAAT
CAAAATGACACTTTATCCAAGCAAACTAAAGGAGGAGAAGGCCAGCACCCTGCTTGTTCCATCTTATTCAACGGATAGTT
TGTCCGGTGCGGATCAAGAGAATGGAGAACCGCTTCTGCGTGGCACTTCGGCGACGTTTGTTCCAGGCAACAATGATTCT
GATGAGACTGATCTGGATGTTCTGCTGGCTGAGGGTGAGGGAGCAGTGAATTTGAAGAAGAGGAAAGGACCAAGAAGAGG
GGACGATTTCACATTTGCTGAAGCCTTAGTAAAGGCAGATTTCTGGCTACTGTTCATTGTATACTTTTGTGGTGTTGGCA
CTGGTGTCACTGCTCTAAACAACCTAGCTCAGATTGGGACTTCTGTTGGTGCTAATGACACAACTGTTTTGTTGTGCCTC
TTCGGCTTCTGCAACTTTGTTGGCCGTATCCTTGGTGGATCTATCTCTGAATATTTTGTAAGGTAAGCTCTCTTTTAACT
AGTTTGCAGCAACTATTGTTTCTTCTAAGGATGCATCAGAAGGATTACGTTCGATGAGTTGGGTTATCTGTTCAGTGGAT
GCAGGGCAGAGATGTAAAGTCTTGTGTCTAAAAAATGTTCACAAGAATTAAGCAGCAGCTAATGCTA---TATACACAAT
CAGTAATATCACTCCATGTTAA------ATCACTAATGCTCATGCATTTCTGTTAACTATCGGTAACCCTTCAGACATAC
TAGCTGTTGGTCTCATTGTCTTGTATG-TTTGCATCTGTTTGAACACACATTTTTCCACAA---TTATTTGAATGATCTT
TTTTTTTCCTATTGAAACAT-ATGAAATAATTTGAGTTGCTACTTCTGAG-ATAGTTGAATAACAC-TTGACTTGATATA
TTGCAGAACAAGAATGCTTCCTCGTCCTTTCTGGATGATGTGCACACAAATAATCATGGTGGTAACCTTCCTCCTTTTCG
CGACCGGTCTCCACAGCCTGATCTACGTGTCAACGACGCTGCTGGGGATATGCTACGGGGTCCAGTTCGCGGTCATGATA
CCGACCGTGTCGGAGCTTTTCGGGCTCAAGGACTTTGGGTTGATGTACAACTTCATGCTCATGGTGAACCCGATCGGCGC
GTTCTTTTTCTCGGCCCTCCTTGCCGGTTACGTCTACGACAAGGAGGCGGAGAGGCAGAACCCGGGCGTGCTGGACCCTT
CAAACTGCTTTGGACCTGACTGTTTCAGGCTCACATTCTACGTCTGTGCCATGGTGTGTTGCTGCGGAACCCTGATCTGC
CTAGTTTTCATCGCGAGGATCAAGCCGGTTTATCAGATGCTATATGCTAGTGGGTCGTTCAGACACCCTCGA---CAGCA
GCAGCTGTACTGA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2D_1_TraesCS2D01G356200
GCAAGTAGGCCAGAATTGGTTTCGCCGTTGGACCGCGCAATAGATCTGGGTTTTCAATTCTGTTCAACCCGACAGCTCAC
ACTGGC-----GTATTATGACCCCAATAGCCTCCACGGATGGAAGCAGATCTTCCTACCTGATTTAGGTGATGTTGGATA
TGCGGGGAATATTTTTCAATGCCAGTTTGTAGAGAGAAATTTGGTGAAAAGGACTTCTTTTCTCATGAAAAGGTCAAGTT
GACTTTACTT--------AATATAGTTTTATAAGATCATCTGCAAATCATTTTTTTTT-CGGGAAATCTGCAAATC----
---------------ACTTCAGTACTGTAGGATTAACAGAATGTTTGTATTTACACTCACTGTGCCGGTAAAGGGATGAG
CATTTTAAATAGGGAAAAACGATGGCTGCTGCTAATTTGTTTGTCACCAACATAAAGAATGTCAGCACATATGTGATGAT
CTTGTCATAATGTAGGGTGATTTGTCA-----------------------------------------------------
--------------------------------------------------------------------------------
-------------------AACAAGAACTAAAGGACATAAGGTGCAT-ATGTGCATGATCGCCCTAAACAAATGTTGATA
GTATACACTATATAGACACTTCACCCTTTGCTTAACAGTGAGTGCTGATTTCTC--------ATAATCCATTTAAGGTTG
TTTCTCTCTGTACACTATTTGGCTTATTGTGAAAACCTCCCCCCATGGCCGAGTTACTTCAGGATAGAGGGCAAGAAACC
AGATTTGCCATACATTTTACTGAGCCATGATGGGCTGGTGGCTGATCCTTACGATACCCGTGGGGCCTCAAATCTGATTG
ATGCATCACCAGACAAATGAA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CTGCGCCAAATATAGCATTCATGATGCAGGAGGCGTGCGAATGCTCAATGCAT
GACCTGTTGATAAATTGTTTTTCCATGTGGC-AAATTTTTTAAAGCATCAAATTTACTTCTGATACAAGTTCTCTTCTGA
GTAATGTGGTACCTTGATGAATAAGCCGTATACAATTGCTTATACATCTTGTATCGAAAATTTCAGATAGTTTTATATAC
CATGAACATTTTCTCTTTGCTATTGCAGTTGTGTATAGCTCTATGTGTCGGCACAAACAGCAGTGCATGGTTGGGAACTG
CGGCGCTTGTGACCAACATGAGGAACTTCCCTCTGAGTCGAGGAACCGTTGCTGGTCTCATCAAAGGTTATGTTGCTGTT
AGTGCTGCTGTCTACACGGAAACGTTCAATGGAATGCTTAACAATTCACCCACAAACCTTTTGCTATTGCTTGCTTTGGG
GATCCCGGTAGCATGTGTTGTGGTGATGTATTTTGTTAGGCCCTGCACCCCATCACTGGATGAGGATAATGCAACCGAAC
ACAGCCACTTCGTGTTCACACAGGTCTCTAGTGTGGTTCTCGGCGTATATCTTATGGTGGCTACAATACTCGGCGATACT
TTGAACCTAAGCGCGACTATCACCTACCTTTTGTTTGGTATAATGATACTCCTGCTCCTTTCTCCACTTGCCATACCAAT
CAAAATGACACTTTATCCAAGCAAACTAAAGGAGGAGAAGGCCAGCACCCTGCTTGTTCCATCTTATTCAACGGATAGTT
TGTCCGGTGCGGATCAAGAGAATGGAGAACCGCTTCTGCGTGGCACTTCGGCGACGTTTGTTCCAGGCAACAATGATTCT
GATGAGACTGATCTGGATGTTCTGCTGGCTGAGGGTGAGGGAGCAGTGAATTTGAAGAAGAGGAAAGGACCAAGAAGAGG
GGACGATTTCACATTTGCTGAAGCCTTAGTAAAGGCAGATTTCTGGCTACTGTTCATTGTATACTTTTGTGGTGTTGGCA
CTGGTGTCACTGCTCTAAACAACCTAGCTCAGATTGGGACTTCTGTTGGTGCTAATGACACAACTGTTTTGTTGTGCCTC
TTCGGCTTCTGCAACTTTGTTGGCCGTATCCTTGGTGGATCTATCTCTGAATATTTTGTAAGGTAAGCTCTCTTTTAACT
AGTTTGCAGCAACTATTGTTTCTTCTAAGGATGCATCAGAAGGATTACGTTCGATGAGTTGGGTTATCTGTTCAGTGGAT
GCAGGGCAGAGATGTAAAGTCTTGTGTCTAAAAAATGTTCACAAGAATTAAGCAGCAGCTAATGCTA---TATACACAAT
CAGTAATATCACTCCATGTTAA------ATCACTAATGCTCATGCATTTCTGTTAACTATCGGTAACCCTTCAGACATAC
TAGCTGTTGGTCTCATTGTCTTGTATG-TTTGCATCTGTTTGAACACACATTTTTCCACAA---TTATTTGAATGATCTT
TTTTTTTCCTATTGAAACAT-ATGAAATAATTTGAGTTGCTACTTCTGAG-ATAGTTGAATAACAC-TTGACTTGATATA
TTGCAGAACAAGAATGCTTCCTCGTCCTTTCTGGATGATGTGCACACAAATAATCATGGTGGTAACCTTCCTCCTTTTCG
CGACCGGTCTCCACAGCCTGATCTACGTGTCAACGACGCTGCTGGGGATATGCTACGGGGTCCAGTTCGCGGTCATGATA
CCGACCGTGTCGGAGCTTTTCGGGCTCAAGGACTTTGGGTTGATGTACAACTTCATGCTCATGGTGAACCCGATCGGCGC
GTTCTTTTTCTCGGCCCTCCTTGCCGGTTACGTCTACGACAAGGAGGCGGAGAGGCAGAACCCGGGCGTGCTGGACCCTT
CAAACTGCTTTGGACCTGACTGTTTCAGGCTCACATTCTACGTCTGTGCCATGGTGTGTTGCTGCGGAACCCTGATCTGC
CTAGTTTTCATCGCGAGGATCAAGCCGGTTTATCAGATGCTATATGCTAGTGGGTCGTTCAGACACCCTCGA---CAGCA
GCAGCTGTACTGATGGAGTAAGTGGCATCAATAGA-AAAGCTTGCAAGTATGAGAAAAGAAAAGAACAGAGGAAGTTG-T
CAGCTGGTTGTCTGTAATTCTGCCTTCTTCTT---GCATCATATTGCAGCAGCGTATATTATCCCAC--------GGTTG
TTTGCTTGATTCATCCCTTGTTGGTATTGGAGCATATGAGAGAGTTCTCTTGATTCCATAATTTGTTCATGTTGTGTAAG
GTA---TATACAGCCGA-TCGTCGACGATAGCGCTGGACGGAAACTTGGGGGTGTGTATATATGAGCAGATCTTGTACTA
TTGTAAATCAGGAGACCAGGGAGGTTTCGGGCATGCTGTGCAGTGGGCAGTATCTTCTGCATTCCCCTTCGTGGTGCCAC
GAGTTTATTATGTATTATATATCAATCTCAGCAATAGCATCTTGTATTGTATCTGTGTATTGTGAACCCTGAAGGGGCAG
CTT-GCAGTTGCCAGCAGTACAATTCTTTTGCATATTTCAACACTC--GTGGTTGAGCCCATGGATATTTTTCCATCCAC
CCCTGTGCTAGTGTGGCCACAGAAGTGAGAGATATCTTAAGAACGAATTGCAGAGTTTGCACCTGGTATCC-GTTGTTTC
TTACAGTCTGAGAGTCGTCGTCTCCAAGCTTCGTTGCCCGGCCCGAACCCGGATC-TGCTCCGTCGGCGCAGCCGGCCGG
AGTGGAGATGCGAAGGCGCTCGGTGCTCTCTTGTTTTTAGTACCTACTGTACTTTGCAATCCAAAACAGAGTAACAGAGA
TCCAGAACGTAGTGCGTTGCAATCCAAAACCAAGAAGGGGAAACTGAAAGTTAAAAAGAGCGACTAGAACATGCTCTAGC
ACAGCTAAGATAGACAAGATCAAAGTTCCATCAAAGGGATGGTCTTGGCCTTCTTTGCAGGAGTTGCGCTCTGCGTCGGC
GACCAGCAGCTAGTCTCCAGTGTGGACGCTGGGCATAGGAACACATGCTTCTCATCAGTCTTGCCTCGGGGAGGA
>chr2B_1
GCAAGTAGGCCAGAGTTGGTTTCGGCGTTGGACCGCGCAATAAATCTGGGTTTTCAATTCTGTTCAACCCGACAGCTCAC
ACTGGTGTACAGTATTATGACCCCAATAGCCTCCACGGATGGAAGCAGATCTTCCTACCTGGTTTTGGTGATATTGGATA
TGCGAGGGATCTTTTTCAATGCCAGTTTGT--AGAGAAATTTGGTGAAAATGACTTCTTTTCTCATGAAAAGGTCAAGTT
GACTTTACTTTAGTTAATAATATAGTTTTATAAGATCATCTGCAAATAACTTCAGTACTGCAGTCACCCGCAAAAAAGAA
AAAAAGAACTTCAGTACTGCAGTACTGTAGGTTTAGTGGTTTACCAGAATAGGTGC------------------------
-----------------------------------------TGTCACCAAAATTTCCGTCCAAACACCAGCTGC------
---------------------TTTTTTTTGCGGGAAAGGAAGTGAACAAAATGAACCTT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CTATGAACAAAAGTGAGACCTTATTTCTGCATGTTCAATAACCCAGTCAACAAAA
TTTCCGTCCAAACACCAGCTGCTTTGACATCATTATTTCTGCACGTTCAATATCCCAGTCAACAAAATGAACCTTCTATG
AACAAAAGTGAAACCTTATTTGTTTGACCGTCAATTTGGCTTCCGGATGTGATCAATGATTTACTTGCATTCATGTTTTT
TTCGTAAGTCTTGTTAAGTTTCTCCCGCGAAAATGTAGTTAGCTCCCAAAAGAAGCACCGATAATGGTTCTTATATCTAG
TTTTATATTTGGGATTTGGCGTGTTTGGTTTGAGCCCAAGCTAACGCTACCAAAATTCGGCTAAGGTTTTGTTTGCCCGT
GTTTTCGCCAATGTTGGCAAGAAAAACGAACTGGAGTTGGCTAGAGGATATGAGCATGCCAAAATATTGGCAACCATCCA
GGCAAGAGCCAAAATTTTGGATATGGCCAAAAAATTGGTATGGTTGCAAATTTCGGTTTGAGTTGATCCGGAATTTCAGC
CTGTTCCAAACTTCTAGTATTTGGATTCTGTGCCAAAAAAATCGTTCATGATGAGCAT-------GAATGCTCAATGCGT
GACCAGTTGAACAAC-GTTTTTCCATTTGGCGAAAATTCTTAAAGCATCAATTTACTGTTGATATAGA-TTCTCTTCTGA
GTAATGTGGTAGCTTGATGAATAATGCGCATACGATTGTTTATAGCTCTTGTATCCAAAATTTCAGC-AGTCTTATATAC
CATGAACCTTTTCCCTTTGCTATTGCAGTTGTGTATAGCTCTATGTGTCGGCACAAACAGCAGTGCATGGTTGGGAACTG
CTGCGCTTGTGACCAACATGAGGAACTTCCCTCTGAGTCGAGGAACCGTTGCTGGCCTCATCAAAGGTTATGTTGCTGTT
AGTGCTGCTGTCTACACGGAAACATTCAATGGGATGCTTAATAATTCGCCCACAAACCTTTTGCTGTTGCTTGCTTTGGG
GATCCCGGTAGCATGTGTTGTGGTGATGTATTTTGTTAGGCCCTGCACCCCATCGCTGGATGAGGATAATGCAACAGAAC
ACAGCCACTTCGTGTTCACACAGGTCTCTAGTGTGGTTCTCGGCGTATATCTTATGGTGGCCACAATACTCGGCGACACT
TTGAAACTGAGCGCGACTATCACCTACCTTTTGTTTGGTATAATGATACTCCTGCTCCTTTCTCCACTTGCCATACCAAT
CAAAATGACACTTTATCCAAGCAAACCAAAGGAGGAGAAGGCCAGCACCCTGCTTGTTCCATCTTATTCAACGGATAGTT
TGTCCGGTGCGGATCAAGAGAATGGAGAACCGCTTCTGCGTGGCACTTCGGCGACGTTTGTTCCAGGCAGCAATGATTCT
GATGAGACTGATCTGGATGTTCTGCTGGCTGAGGGTGAGGGAGCAGTGAATTTGAAGAAGAGGAAAGGGCCAAGAAGAGG
GGACGATTTCACATTTGCTGAAGCCTTAGTTAAGGCAGATTTCTGGCTACTGTTCATTGTATACTTTTGTGGTGTTGGCA
CTGGTGTCACTGCTCTCAACAACCTAGCTCAGATTGGGACGTCTGTTGGTGCTAATGACACAACTGTTTTGTTGTGCCTC
TTTGGCTTCTGCAACTTTGTTGGCCGTATCCTCGGTGGATCAATCTCTGAATATTTCGTAAGGTTAGTTCTCTTTTAACC
AGTTTGCAGCAACTTTTT----TTCTAAGGATGCTTCACAAGGATTATGCTTGATGAGTTGGGGTATCTGTCCAATGAAC
ACACGTTTGCACAATTATTTGAAAGATCGTGGAAA------------------------------------------AAT
CAGTAATGACCGTGCACTTCTGCGGACTATCGATAG------------------------------CCATTCTTACATAC
TAGTTGTTGATCTCAATAGCTTTTATATCTTGCATCTGTTTGAACACATTTTTCCACA--A---TTATTTCAAAGAT--T
TTCTATTGAAA--GAAACATCATGAAATAATTTGAGTTGTTACTTCTGAAAATAGTTGAATAACAC-TTGGCTTGATACA
TTGCAGAACAAGAATGCTTCCTCGTCCTTTCTGGATGATGTGCACACAAATAATCATGGTGGTAACCTTCCTCCTCTTCG
CGACCGGCCTCCATAGCCTGATATACGTGTCAACGACGCTGCTGGGGATATGCTACGGGGTCCAGTTCGCGGTCATGATA
CCGACCGTGTCGGAGCTTTTCGGGCTCAAGGACTTTGGTCTGATGTACAACTTCATGCTCATGGTGAACCCGATCGGCGC
GTTCTTTTTCTCGGCCCTCCTCGCCGGTTACGTCTACGACAAGGAGGCGGAGAGGCAGAACCCGGGTGTGCTGGACCCTT
CAAACTGCTTTGGACCTGACTGTTTCAGGCTCACATTCTACGTCTGTGCCATGGTGTGCTGCTGCGGGACCCTGATCTGC
CTAGTTTTCATCGCGAGGATCAAGCCGGTTTATCAGATGCTCTACGCCAGCGGGTCGTTCAGACACCCTCGACAGCAGCA
GCAGCTGTACTGATGGAGTACAATGGCATCCATATGAAAACTTGCAAGTATGAGAAAAGAAAAGAACAGAGGAAAAATAT
CAGCTGGTTGTCTACAGTTCCACCTTCTTCTTATTGCATCACATTGCAGTTGCCGCGCTATATATTATCTCGGAGGGTTG
TTTGCTTGATTCATCCCTTATTGGTATTGGAGCGTATGAGAGAGTTCCTTTCATTTCATAATTTGTTCCTGTTGTGTAAG
GTA---TACAGCCGATCGTCGTCGACGATAGCGCTGGACGGAAACTTGGGGGTGTGTATATATGAGCAGATCTTGTACTG
TTGCAAATCAGGAGACCAGGGAGGTTTTGAGCATGCTGTGGAATGAGCAGTATCTTGTGCATTCCCCTCCGTGGTACCAC
GAGTTT---ATGTATTCTATATCAATGTCAGCATCCTGTAT------------TGTATATTCTGAACTCTGAGGGAGCAG
CTTTGCAGTTGCCAGCAGTACAATTCTTTTGCATATTTCAACACTC--GTGGTTGAGCCCATGGATATTTTTCCATTCTC
CCCTGTGCTAGTGTGGCCACAGAAGTGAGAGATATGTTAAGAACGAATTGCAG--TTTGCACCTGGTATCCTGTTGTTTG
TTACAGTTTAAATGTCGTTGTCTCCAAGCTTCGATGCCCGGCCCGAACCCGGATGTTGCGCCGTCGGCGCAGCCGGCCGG
AGTGGAGACGGGGAGGCGCTCGGTGCTCTCTTGTTTTTAGTACTACTT----TTTGCAATCCAAAACAGAGCAACAGAGA
TCCAGAACGTAGTGCGTTGCAATCCAAAACTAAGAC------------------AAAGAGCGACTAGAACATGCTCTAGC
ACAGCTAAGATGGACAAGACCAAAGTTCCATCAAGGGGATCGTCTTGGCCTTCTTTGCAGGAGTTGCGCTCTGCG-----
----------------------------------------------GCTTCTCATCAGTCTTGCCTCGGGGAGGA
>chr2A_3
--AAGTAGGCCAGAATTGGTTTCGGCGTTGGACCGCGCAATAAATCTGGGTTTTCAATTCTGTTCAACCCGACAGCTCAC
ACTGGCGC-----ATTATGACCCCAATAGCCTCCACGGATGGAAGCAGATCTTCCAGCCTGATTTTGGTGATGTTGGATA
TGCGGGGAATCTTTTTTATTGCCAGTTTGTAGAGAGAAATTTGGTGAAAATGACTTTTTTTCTCATGAAAAGGTCAAGTT
GACTTTACTT--------AATATAGTTTTATAAGATCATCTGCAAATCACTTTTTTTCCCGGGAAATCTGCAAATC----
---------------ACTTCAGTACTGTAGGTTTACCAGAATTTTTGTATTTACGCTCAGTGTGCCGGTAAAGGAATGAG
CATTTTAAATAGGGAAAAACAATGGCGGCTGCTAATTTGCTTG-CACCAACATAAAGAACGTCAGCACATATGTGATGAT
CTTGTCATAATGGAGGGTGATTTTTTTTTTTGAGAAATCACCGGGGGAGGAGTCCCTCCACCTGAATATTACTCAAAGTG
GCCATTATGCCAAGAGAGTGATCCAGTTTATAAGGGAAACCGGATCGAAAACCTAAACAACTTGACCCTGTTTATAAGGG
AAACAAGGCTGAAAACCAGAACAAGAACTAAAGGACATAAGGTGCATTATGTGCATGATCACCCTAAACAAATGTTGATA
GTAG--ACTATATAGACACTTCACACTTTGCTTAACAGTGAGTGCTGGTTTCTC--------GTAATCCATTTAAGGTTG
TTTCTCTCTGTACACTTTTTGGCTTATTGTGAAAACGTCCCCCCATGGCCGAGTTACTTAAGGATAGAGGGCAAGAAGCC
AGATTTGCCACACATTTTACTGAGCCATGATGGGCTGGTGGCTGATCCTTACGATACCCGTGGGGCTTCAAATCTGATTG
ATGCATCACCAGACAAATGAA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CTGTGCCAAATATAGCATTCATGATGCAGGAGGCGTGCGAATGCTCAATGCAT
GACCTGTTGATAAATTGTTTTTCCATGTGGC-AAATTTTTTAAAGCATCAAATTTACTTCTGATACAAGTTCTCTTCTGA
GTAACGTGGTAGCTTGATGAATAAGCCGTATACGATTGCTTATACATCTTGTATCAAAAATTTCAGATAGTCTTATATAC
CATGAACGTTTTCTCTTTGTTATTGCAGTTGTGTATAGCTCTATGTGTCGGCACAAACAGCAGTGCATGGTTGGGAACTG
CGGCGCTTGTGACCAACATGAGGAACTTTCCTCTCAGCCGAGGAACCGTTGCCGGTCTCATCAAAGGTTATGTTGCTGTT
AGTGCTGCTGTCTACACGGAAACGTTCAATGGAATGCTTAACAATTCGCCCACAAACCTTTTGCTGTTGCTTGCTTTGGG
GATCCCGGTAGCATGTGTTGTGGTGATGTATTTTGTCAGGCCCTGCACCCCATCACTGGATGAGGATAATGCAACAGAAC
ACAGCCACTTCGTGTTCACGCAGGTCTCTAGCGTGGTTCTCGGCGTGTACCTTATGGTGGCTACGATACTCGGCGACACT
TTGAACCTAAGTGCGACTATCACCTACCTTTTATTTGGTATAATGATACTCCTGCTCCTTTCTCCACTTGCCATACCAAT
CAAAATGACACTTTATCCAAGCAAGCCAAAGGAGGAGAAGGCCAGCGCCCTGCTTGTTCCGTCTTATTCAACGGATAGTT
TGTCCGGTGCGGATCAAGAGAATGGAGAACCGCTTCTGCGTGGCACGTCGGCGACGTTTGTTCCAGGCAACAATGATTCT
GATGAGACTGATCTGGATGTTCTGCTTGCTGAGGGTGAGGGAGCAGTGAATTTGAAGAAGAGGAAAGGGCCAAGAAGAGG
GGACGATTTCACATTTGCTGAAGCCTTAGTTAAGGCAGATTTCTGGCTACTGTTTATTGTATACTTTTGTGGTGTTGGCA
CTGGTGTCACTGCTCTGAACAACCTAGCTCAGATTGGGACTTCTGTTGGTGCTAATGACACAACTGTTTTGTTGTGCCTC
TTTGGCTTCTGCAACTTTGTTGGCCGTATCCTTGGTGGATCAATCTCTGAATATTTCGTAAGGTTAGTCCTCTTTTAACT
AGTTTGTAGCAACTTTTTCC----CTAAGTATGCATCACAAGGATTACGCTTGATGAGCTGGGTTATCTGTTCAGTGGAT
GCAGGGCAGAGATGTAAAGTCTTGTGTCTAAAAAATGTTCACAAGAATTAAGCAGCAGCTAACGTCATAGTATACACAAT
CAGTAATATCACTCCATGTTAA------ATCACTAA------------------------------CCCTTCAGACATAA
TAGTTGTTGATCTCATTGTCTTGTATGTTTTGCATCTGTTTAAACACACATTTTCCCACGTTTTTTATTTGAATGAA--T
TTTTTTGTCTATTGAAACATCATGAAATAATT------GCTACTTCTGAAAATAGTTGAGTAACACTTTGACTTGGTACA
TTGCAGAACAAGAATGCTTCCTCGTCCTTTCTGGATGATGTGCACACAAATAATCATGGTGGTAACCTTCCTCCTTTTTG
CGACCGGCCTCCACAGCCTGATCTATGTGTCAACGACGCTGCTGGGGATATGCTACGGGGTCCAGTTCGCAGTCATGATA
CCGACCGTGTCGGAGCTTTTCGGGCTCAAGGACTTCGGGCTGATGTACAACTTCATGCTCATGGTGAACCCGATCGGCGC
GTTCTTTTTCTCGGCCCTCCTCGCCGGTTACGTCTACGACAAGGAGGCGGAGAGGCAGAACCCTGGCGTGCTGGACCCTT
CAAACTGCTTTGGACCTGACTGTTTCAGGCTCACATTCTACGTCTGTGCCATGGTGTGTTGCTGTGGAACCCTGATCTGC
CTAGTTTTCATCGCGAGGATCAAGCCGGTTTATCAGATGCTCTACGCCAGCGGGTCGTTCAGACACCCTCGA---CAGCA
GCAGCTGTACTGATGGAGTAAGTGGCATCAATAG-GAAAACTTGAAAGTATGAGAACAGAAAAGAACAGAGGAAGTTG-T
CAGCTGGTTGTCTGTAATTCTGCCTTCTTCTT---GCATCATATTGCAGCGGCGTATATTATCCCAC--------CGTTG
TTTGCTTGATTCATCCCTTGTTGGTATTGGAGCATATGAGAGAGTTCCTTTCATTCCATAATTTGTTCCTGTTGTGTAAG
GTAAGGTATCCAGCTGC-TCATCGACGATACCGCTGGACGGAAACTTGGGGGTGTGTATATATGAGCAGATGTTGTACTG
TTGTAAATCAGGAGACCAGGGAGGTTTTGGGCATGCTGTGGAATGAGCAGTATCTTGTGCATTCCACTTCGTGGTACCAC
GAGTTT---ATGTATTCTATATCAATCTCAGCGTCC------TGTATTGTACTAGTATATTCTGAACTCTGAAGGGGCAG
CTT-GCAGTTGCCAGCAGTACAATTCTTTTGCATATTTCAACACCCCAGTGGTTGAGCCCATGGATATTT--CCATTCTT
CCCTGTGCTAGTGTGGGCACAGAAGTGAGAGATATCTTAAGAGCAAATTGCAGAGTTTGCACGTGGTATCCTGTTGTCTC
TTACAATTCGAGAGTCGTCGTCTCCAAGCTTCGTTGCCCGGCCCGAACCCGGATC-TGCTCCGTCGGCGCAGCCGGCCGG
AGTGGAGATGGGGAGGCGCTCGGTGCTCTCTTGTTTTTAGTACTACCT----TTTGCAATCCAAAACAGAGCAACAGAGA
TCCAAACGTAGTG-------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>SNPs
------------------------S-----------------S-------------------------------------
-----------------------------------------------------------------S--------------
----------S---------------------------------------S-----------------------------
-------------------------------------------------S-------S----------------------
-------------------------------S---S------S-----------S----S--------------S-----
--------------------S-----S------------S-------------------S--------------------
------------S----------S-SS-----------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
---SSS------------------S-------------------------------------------------------
------------------------------------S-------------------------------------------
----------S-------------------------------------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
-----------S---------------------S---------------------S---------------S--------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S-----------------S--------------
---------------------------------------------------------------------------S----
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
------------------------------S-------------------------------------------------
----------------S---------------------------------------------------------------
--S--------------------------------------S--------------S-------S--S------------
--------------S--SSSSS----------------S----------S-S----------------------------
--------------------------------------------------------------S-SS--------------
------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
---S-----S--------------------------------------------S----S-----------------SS-
-------S-----------------------------------------S----------------------------S-
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
---------------------------------------S----------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--S--S--S-----------------------------
----------------------------------S----S----------------------------------------
--------------------------------------------------S-----------------------------
-----------------------------------------------SS--S----------------S-----------
--------------S-S--------------------------------------------------------------S
---------------------------S------------S-S--S----------S------------------S----
------SSS-------S----------------SSSSSSSSS---------SS---S----S-----S------------
----------------------------------------------------------------------------S-S-
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
----------S-S------------------------------SSS--SSSS-------------------S--------
------------------------------S----SSSSSSSSSSSSSSSSSSS--------------------------
-----------S-------S--------------S-----S----------------------------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------
>forward_395
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CTCACTGTGCCGGTAAAGGG-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_2027
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TAAAGGAGGAGAAGGCCAGC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>forward_1917
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGGCTACAATACTCGGCGAT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_3325
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TGCTAGTGGGTCGTTCAGAC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>forward_2337
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GCA
CTGGTGTCACTGCTCTA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_4326
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----GCAGCTAGTCTCCAGTGTGG--------------------------------------------------
