>input_sequence_42641
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-------------------ATGTGCACTGCAACTCCGCAGTCTGCAAGTAATTGCCACTTTATT-TTAGCTCAAGATTAG
TTCATATATATGGTGCTATTTGTTGTCCGATTTCCGCATGCATTTGATTTTCTGTCAAAATCGAGTTACTCAAAGCATTT
CTTTCTATGCTCATCAGTTTTTATACTCTGTTGATTTGGTTTGAAGGTGCCAGGTGCTGTTTGGTCAATATGATTGTTGG
GGGTGGCTATTTTGAAGGTTCCCATGATCATAATCTCATGCCGGGATCTTTAATAAAACCTGACTTTGCAAATGAGAGGC
AGAGGAGGGAATGGATGAATGTAGCGTTCTGGGCTTTAAGAATCCTCCTCCCCGATCCCAAGGTTTGTCTTGTTCATCA-
TTTTGCAAATTTAGGTGATTTAATGACTTTCATATGTACTTCAAAACTGCGACACTTATTTTGGATCGGATGGAGTACAT
AATACTCAACTACTAGAAGATAATATAATTTCTGTATAATTTCACCCATTCTTCTGGA----------------------
-----TGCCATCTTCAGAATACTATGCAGTTTTCACTGTCTTCTTAATTAATGAAAATGGCAATTCTTTTGCCTCGTTTC
CAAATAAGAAAAATAATATTGCAGCCTAATAGACCCATGTTTTGTATTAGATCAACAAAAACCCCTTTTCAAAACTGTCT
TTTATGTAAAGTAGGTTCAAGAAACATGAGTTAAATAATATGCTTCTGCTAGCCTTTTGTAAGAATACTCTCGTTCGATC
TCTGT-------TTACATTCGGTCTGATACCAACATCCTGTTAAAAGTATTTGCCATGAAGTAGATCGTCACTCTGCTGG
TGCTATACTATTTAACCCATATATCCTGATTGAGTATGTCAGTTAACCTCTATTTAATCATGGAGAGCAATAAAAAAAAT
TGATATATCAATATTATTTTGATTTTTAGTGACTGTATTTACTTTGATTTTTTCATAAGATAATGTCATCATCTTCATTG
CATTACTCTTCAAAAACAGTACCCACATCTCTAGTGATGTAATCTTAACCAATTAGATAGGACTTTCTGATTTACTCAAA
GAAAAACTAAACAGCATGACAGAACAATGAAAATCTTCCTTGTACTCCCTCCATTTTATAGGGTGCTCATATAAGTTCAT
ATAAGTTCGATATTGCATTAATGCGCTACAGAACTTTTTACTAGGACGACAGGGTCTCAAATGTAGAGGATGCCATTGAA
TACATACATGAGCTGAACCGGACAGTGAAGGAACTGAAGATCCTAGTAGAACAGAAGAGGCATGGGACTAATAGGAAAAA
GATGATAAAGATGGACGAAGAGGCAGCTTCCGATGGCGAGAACTCATCGACGATGCCAGTGAGGGATGAGCAAGACAATG
AGCTCGATTGGGCCATAAGGAGCTCCTGGGTGCAGAGGAGGTCCCAGGAATGCCGTGTTGATGTCCACATAGTGGAAAAT
GCAGTAAACGTCCAGCTCACTGAATGGAAGAACGCCAACTCCCTGCCTCATGCCGCGAAGGTTCTCGACGAGTTCCATCT
TGAGATCATCAGCGTGGTCGGACAGATTGTTGGCGATCACCGCATATTCATCTTCAACACTAAGGTACTGAGAGGATATT
CTTTAATTTAAGCAGCATCAGGAACCTCTTTCCTGACATCACCGATTATCATTGACAGTAAATGCTACATGTCCATGTTG
ACGCAGGTATCTGAAGGCTGCTCGGTGTATGCCCTTGCAGTGGCCGAGAGGCTCTTTCAAGCAGTTGATGCACAGCACCA
GGCCCTCAACATACTCGGCCAGGCTCTAGCAACCAAACTGACTATCTGA-------------------------------
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-----------------------------------------------------------------
>chr2A_1_TraesCS2A01G442500
GTGCTCATAGGGGTAGGGTGTGCGTGTGTGCGTTCATAGGGGTGAGTGTATGCGCGTATATATGAGCGCTTGTGTCTGTA
CTGATGCTCAAAAAAAAAGAATAAAAGGGAGGAGCCCTACACTCCAACTCTTCTGCACCGAATAAATCTGTGAATGCATT
CGCCGTGCCTCAGTCCAGTACCGAAAATCAATCCAGCCGAAGGAAGTGGATGGCATGCTTTAGACGTCTGTAGCGCTCTA
GTTTCTCATAAAACATGGTAAGCAGGCAGAAGGCATGACCTACATTTCTCAACTTCCTATGGGTGAATGACATCAGAGAT
GCCAAATTCAAAGGGCGTGAGCTTTCCGCATTTCTCGGCTGTGTCTCTAAACAGTAACAGAAACAATGACAAATCATACG
ATGACCGTTCGCATTGACCTTTAGCACCGCCACATTCTGTTATATTCTGGCCCATCAATTTTGTGTGACTTGCCACTATG
ATATTCTTGGCAGTTGGCACAGCATATAAATTAGGTCCCATGAGACCTTGAGTTTCAACTTCATGAACAAAGTTCAGGTA
TGCTCTCTTCTAGTGCTAC----------------ATGTAACTCACGATCACAACACTTTTCTGCTTTCTTTAGGAAGAT
T-------------------AAAATCATAACACTGAGCCAGCATGGATTTCTTGTGCTCCATTTTACTGATCATCTTGCG
CTTACTGAGGTGTATTTATCATTACAAATTTGTTTCGGGATACTCAATAGTTTGCCGGTTGGCTAATGCGCTTGCGGTAG
TTGAAGCACGAAAAAGATGCTAAGGGGTCTGTTAGGTGTGGGACAAGCAGAGTTCCTTCATGTTCCATCTTCCATGAATC
ATGCATGCCGCGTACAAC------------------------GCCAAATTGCATAGCTTAAAACTCCACGGCACCACCTC
TTCTGCAACGACCGAAGCAACCAAGCCAGCTGCAATTTCTGTTTCTAACCGAATTCTATCTGCTGCTGCGTTCTTGTCGA
GTCATCTTTTCCCCTTAGTATGTGCACTGCAACTCCGCAGTCTGCAAGTAATTGCCACTTTATT-TTAGCTCAAGATTAG
TTCATATATATGGTGCTATTTGTTGTCCGATTTCCGCATGCATTTGATTTTCTGTCAAAATCGAGTTACTCAAAGCATTT
CTTTCTATGCTCATCAGTTTTTATACTCTGTTGATTTGGTTTGAAGGTGCCAGGTGCTGTTTGGTCAATATGATTGTTGG
GGGTGGCTATTTTGAAGGTTCCCATGATCATAATCTCATGCCGGGATCTTTAATAAAACCTGACTTTGCAAATGAGAGGC
AGAGGAGGGAATGGATGAATGTAGCGTTCTGGGCTTTAAGAATCCTCCTCCCCGATCCCAAGGTTTGTCTTGTTCATCA-
TTTTGCAAATTTAGGTGATTTAATGACTTTCATATGTACTTCAAAACTGCGACACTTATTTTGGATCGGATGGAGTACAT
AATACTCAACTACTAGAAGATAATATAATTTCTGTATAATTTCACCCATTCTTCTGGA----------------------
-----TGCCATCTTCAGAATACTATGCAGTTTTCACTGTCTTCTTAATTAATGAAAATGGCAATTCTTTTGCCTCGTTTC
CAAATAAGAAAAATAATATTGCAGCCTAATAGACCCATGTTTTGTATTAGATCAACAAAAACCCCTTTTCAAAACTGTCT
TTTATGTAAAGTAGGTTCAAGAAACATGAGTTAAATAATATGCTTCTGCTAGCCTTTTGTAAGAATACTCTCGTTCGATC
TCTGT-------TTACATTCGGTCTGATACCAACATCCTGTTAAAAGTATTTGCCATGAAGTAGATCGTCACTCTGCTGG
TGCTATACTATTTAACCCATATATCCTGATTGAGTATGTCAGTTAACCTCTATTTAATCATGGAGAGCAATAAAAAAAAT
TGATATATCAATATTATTTTGATTTTTAGTGACTGTATTTACTTTGATTTTTTCATAAGATAATGTCATCATCTTCATTG
CATTACTCTTCAAAAACAGTACCCACATCTCTAGTGATGTAATCTTAACCAATTAGATAGGACTTTCTGATTTACTCAAA
GAAAAACTAAACAGCATGACAGAACAATGAAAATCTTCCTTGTACTCCCTCCATTTTATAGGGTGCTCATATAAGTTCAT
ATAAGTTCGATATTGCATTAATGCGCTACAGAACTTTTTACTAGGACGACAGGGTCTCAAATGTAGAGGATGCCATTGAA
TACATACATGAGCTGAACCGGACAGTGAAGGAACTGAAGATCCTAGTAGAACAGAAGAGGCATGGGACTAATAGGAAAAA
GATGATAAAGATGGACGAAGAGGCAGCTTCCGATGGCGAGAACTCATCGACGATGCCAGTGAGGGATGAGCAAGACAATG
AGCTCGATTGGGCCATAAGGAGCTCCTGGGTGCAGAGGAGGTCCCAGGAATGCCGTGTTGATGTCCACATAGTGGAAAAT
GCAGTAAACGTCCAGCTCACTGAATGGAAGAACGCCAACTCCCTGCCTCATGCCGCGAAGGTTCTCGACGAGTTCCATCT
TGAGATCATCAGCGTGGTCGGACAGATTGTTGGCGATCACCGCATATTCATCTTCAACACTAAGGTACTGAGAGGATATT
CTTTAATTTAAGCAGCATCAGGAACCTCTTTCCTGACATCACCGATTATCATTGACAGTAAATGCTACATGTCCATGTTG
ACGCAGGTATCTGAAGGCTGCTCGGTGTATGCCCTTGCAGTGGCCGAGAGGCTCTTTCAAGCAGTTGATGCACAGCACCA
GGCCCTCAACATACTCGGCCAGGCTCTAGCAACCAAACTGACTATCTGAAGAAGTTCATAGTCTGCAACTGTCTTGGAGT
AGCAATTTCATGTCTGTTCTCTCAGTGACAAAAGTTGTTAAATCGGGC--------------------------------
-----------------TTGATAATCTGGCCATGCGAAAGTCATAAATTGCGTTGGCTGTTCATTTCATCTGTAGTTGGT
TTGAAAACATAA-----TAGCAGAACAACATGATTCACTCATGTTTGGATAGTTTACTGTGCTCTTCGTACCTTCGCGGC
CGCCGCTGGCTAACCCATTGGATCATCTGACGTGGCAGCTGCTGGTCCTCGCCGCCGCCCTACGGGACGCCGCGGCCTGT
GCGAGCAGCACGGGAAGCCACCTCGTCCGGTCGGGTGCAGGGGCTCGGAGCCACCACTACGGCGAGGTCCGCCCCCGCCC
CACGGCCAGCTCCC-TAGGAGAATCGTCCCGGGCCGGGAGGAAGAAGGCCGACGGATCGGAACAGCACGCGATAAGATAT
TTTGGTTGTTTTGTCTTCCGCCTGATAATTATCTTCTGTATTCATATTTAAATTTGAAATTTAACGTGTTATGATTTTGG
AATGTAACTACGCAGTATGCA--TTTTTTGTTTTTTATAGC-TTGATAAATCAATATGAACTTGAATGATCGGTCGTGTT
T-------------------------------------------------------------------------------
-------------------------------------------------------------------CGACGGAGCTGCG
AGCGACGATGACCTCGGCTTCATGTGGGAGGACGAGAGACGCAGGGGTGGGG-TTGACCTTTTCTGCAGTGCGACGAAGG
GAATACTTCAATCGAAAGGCTATTCATAGGCAGATCGGACGGCAGCACGTCGACCGGCCAGACTCTGCCGCTGGTCGACC
TGCACAGAGTACTACCCATTAATATGTCA-----------CTCATTTGCTATCTTTTTTTCAAACAACCCTAATTTGTAT
ACATTGTAGCATATGTTTGTGTTTGCATTTGAATACAATGTGTATGTTTTGTGACCACTATTAGCGAGAAAAACTGGACC
CAATCCAGCGGACGCAGCTCCTCTGACGTACTACGCACACACTGACGTATGGACCCGGACCCACA
>chr2D_472
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------GCCACTATG
ATATTCTTGGCAGTTGGCACAGCATATAAATTAGGTCCCATGCGACCTTGATTTTCATCTTCATGAACAAAGTTGAGGTA
TGCTCTCTTCTAGTGCTTATACTACTGTTCGCTAGATGTAACTCACGATCA--ATACTCCTCTGCTTCTTTAAGTCATAT
TCTACTATTTAGTAAGATTAAAAATCATAACACTGAGCTCCCATGGATTTCTTGTGCTCCATTTTACTGATCATCTTGA-
---------------------------------------------------------------------------GGTAG
TTGAAGCACGAAAAAGATGCCAA-GGGTCTGTTGGGTGTGGAACAAGCAAAGTTGCTTCATG-------TTCCATGAATC
ATGCATGCTGCATACAACTTCTCCGCAAAGGAAGAGCAGACAGCCACATTTCATAGCTTAAAACTCCACGGCTCCACCTC
TTTTGCAACGACCAAAACAACAAAGGCAACTGCAATATCTGTTTCTAATAGAATTCTATCTGCTGTTGCGTTCCTGTTGA
GTCGTCTTTTCCCCTTAGTATGTGCACTGCAACTCTGCACTCTGCAAGTAATTGCCATTTCTATATTAGCTCAAGATTAC
CTCGCATATAAGGTGCTATTTGTTATTCGATTTCTGCATGCATTTGATATTCTGTCAAAATCGAGCTACTCGAAGAATTT
CTTTCTATGCTCATCAGTTTTCATATTCTGTTGATTTGGTTTGAAGGTGCCAGGTGCTGTTTGGTCAATATGATTGTTGG
TGGTGGCTATTTTGAAGGTTCCCATGATCATAATCCCATGGCAGAACCTTCAAGAAAAGCTGACTTTGCAAGTGAGAGAC
AGAGGAGGGAATGGCTGAATGAAGCGTTCTGGGCTTTAAGAATGCTCCTCCCCAATCCTAAGGTTTGTCTTTTTCATCAT
TTTTGCAAATTTAGGTGATTTAGTGACTTTTCAGAT--------------------------------------GTACAG
AATACTCAACTACTAGAAGATAATGGAATTTTAAATAACTTTATCCATTTCTTCTCGATGTGTTAAGAGTTAAGACGCTC
AAAAGTGCCAATATCAGAATACTA--------------------------------------------------------
-------------------TGCAGCCTAATTGACCCGTGTTGTGTAAAAGATCAAT-AAAACCCCTTTTGAAAACTGTCA
TCTGTCTAAAGTAGATTCAAGAAACATGAGTTAGATAATATGCTTCTGCTGATTTTTTTTACTGAGTA-CTCGTCCGATC
TCTGATGCTACATTACATTCAATCTGATACTAATATCCTATTAAAAGTGATTGCCACGAAATAGATCCATGCTGTGCTGT
TTCAATAATACTTGCCCCACATATCTTGATCGAGCGTGTCAA-TACCTTCTATTTAATTATGAGAGATTAATGCGCTTAT
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TAAGTTCGATATGGCATAAATGAGCTACAGAACTTTTTACTAGTGTGACAGGGTCTCAAATGTAGAGGATGCCATTGAG
TACATACATGAGCTGAACCGGACAGTGAAGGAACTGAAGATCCTAGTAGAACAGAAGTGGCATGGGACTAATAGGAAAAA
GATGATAAAGATGGACGGAGAGGCAGCTTCCGATGGCGAAAGCTCATCGACGAGGCCAGTGAGCGATGAGCAA--CAATG
AGCTCGATGGGGCCATAAGGAGCTCCTGGGTGCAGAGGAGGTCCAAGGAGTGCCATGTTGATGTCCACATAGTGGAAAAT
GCAGTAAACGTCCAGCTCACTGAATGGAAGAACGCCAACTCCCTTCCTCATGCTGCGAAGGTTCTCGACGAGTTCCATCT
TGAGATCATCAGCGTGGTTGGACAGATTGTTGACGATCACCGCATATTCGTCTTCAACACTAAGGTACTGAGAGGATATT
GTTTCATTTAAGCAGCATCAGGAACCCCTTTCCTGACATCACCGATTATCATTGATAGTAATGGTAAATCGTCCATGGTG
ACGCAGGTGTCCGAAGGCTGCTCGGTGTATGCCCTTGCAGTGGCCGAGAGGCTCCTTCAAGCAGTGGATGCACAGCACCA
GGCCCTCAACATACTCGGCCAGGCTCTAGCAGCCAAAGTGACTATCTGAAGAAGTTCATAGTCTGCAACTGTCTTTGAGT
AGCAATTTCATGTCTGTTCTCTCAGTGAGAAATGTGGTTAAATCGGGCCTTGA---------------------------
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>chr2B_2142
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----------------------------------------------------------------------------TCAT
ATAAGTTTGATATGGCATTAATGCGCTACAGAACTTTTTACTAGAACGACAGGGTCTCAAATGTAGAGGAGGCCATTGAA
TACATACATGAGCTGAACCGGACGGTGAAGGAACTGAAGATCCTAGTAGAACGGAAGTGGCATGGGACTAATAGGAAAAA
GATGATAAAGATGGACGGAGAGGCAGCTTCCGATGGCGAAAGCTCATCGACGAGGCCAGTGAGGGATGAGCAAGACAATC
AGCTCGATTGGGCCATAAGGAGCTCCTGGGTGCAGAGGGGGTCCAAGGAGTGCCATGTTGATGTCCACGTAGTGGAAAAT
GCAGTAAACGTCCAGCTCACTGAATGGAAGAACGCCAATTCCCTGCCTCATGCCGCGAAGGTCCTCGACGAGCTCCATCT
TGAGATCGTCAGCGTGGTTGGAAAGATTGTTGACGATCACCGCATATTCGTCTTCAACACTAAGGTACTGAGAGGATATT
CTTTAATTTAAGCAGCATCAGGAACCCCTTTCCTGACATCACCGATTATCATTGATTGTAATGGTACATCGTCCATGGTG
ACGCAGGTGTCTGAAGGCTGCTCGGTGTGTGCCCTTGCAGTGGCCGAGAGGCTCCTTCAAGCAGTGGATGCGCAGCACCA
GGCCCTCGACATACTCGGCCAGGCTCTAGCAGCCAAAGTGACTATCTGAAGAAGTTCAGAGTCTGCAACTGTCTTTGAGT
AGCAATTCCATGTCTGTTCTCTCAGTAAGAAATGTTGTTAA-TCGGGCCTTGGAGTGGAGATGACTTTGTCTTGAGCAAC
TTGATAGCTCGCAGAAATTGATAATCTTGCACAAATCATATACTCC--TGCATTGGCCGTTCATTTCATCTGTAACTGGT
TTGTAAACAAAAAACTGTAACAGAACAAGATGATTCACTCATGTTTGGATAGCTTAGTGTGCTCTTCCTACCTTCGCGGC
CGCCGCTGGCGAATCCATTGGATCATCTGGCGTGGCAGCTACTGG-----------------------------GCCTGG
GAGAGCGGCACGGGTATCCACCTCATTTGGTCGGGTGCACGGGCTCGGAGCCACCACTACGGCGAGGTCTGCCCCCGCCC
CACGGCCAGCTCCCCTAGGAGAATCATCGTC--CCGGGAGGGAGAAGGCTGACGGATTGGAACAGCACGCGATAAGATAT
TTTGATTGTTTTGTCTTCCGCCTGATAATTATCTTCTGTATTCATATTTAAATCTGAA-TTTAACGTGTTATGATTTTGG
AATGTAACTATGCAGTATGCATTTTTTTTGTTTTTTTATAGTTTGATAAATCATTATGAACTAGAAGGATCGGTCGTGTT
TTGGTGCGCGGTTGGTGTTGTTGGGATTTCAAAAAAAAAAAAGAAAAATTGGTGTGCGTGGGCGTTGTGACCGTGGCCGA
ACCGGGCTGCTACGAGCGACAAGGAAACGCGGCAGAGCCTAATGCGTGGTGGCGCTGTGACACCGCGCGACGGAGCTGCG
AGCGACGATGACCTCGGCTTGG----------CGAGAGACGCAGGGGTGGGGGTTGACTTTTTCTCCCGTGCTACGAAGG
GAATACTTCAATCGAACGGCTATTCATAGGCAGATCGGACAGCAGCACGGCGACCGGCCAGACTCCGGCGCCGGTCGACT
GACGCGGAGTACTGCCCATTAATATGTCATCAAATTTATTCTCATTTGCTATCTCTTTTTCAAACAACCC-AATTTGTAT
ACATTGTAGCATATGTTCGTGTCTGCATTTGAATACAATGTGTATGTTTTGTGACCACTATTAGCGAGAAAAAATGGACC
CAATCCAGC--------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
------------------------------------------S--------S-----S----------------S-----
-----------------SS--------------------------------SS-S---SS-------SS--S--SS-S--
--------------------------------------SSS-------------------------------------SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
--------------------S--S---------S-------S-------S----S-------SSSSSSS-----------
--------S--S----------------------------------S---S---------------------S-------
--S----------S--S----S---S--S-------S-----------SS---------------S-------S---S--
---S-------------------------------S---S-----------------S--SSS----------------S
S--SS-----S-------------S-S-------S-------------S----------------S-----S---S----
---------------------S---S------------------------------------------------------
S----------------------------------S----S-S-S-S---S--S----S------------S------S-
--------------S------S---------------------S---------S----S------------S--------
----------------------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S
------------------------SS-----SSSSSS-S---SS--SS-------S------------------------
----------SSS-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS-----------S-----S----S----SS-------SS------------S---------S
-S-S-S--------S------------------S----------------SSSS----S--SSS-SSSS-----S-----
----S---------------SS--------S--S-----S--------SS------S---S------SSSS--S-----S
-S-S---S--S--SS----S-----S----S---SS-----SS--S-S----------S---SSSSSSS-SSSSSSSS--
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
-------------S------------------------------S-----------------------------------
---------------------------------------------------------S----------------------
-----------------S---------------------S-S-----------S--------------------------
--------------------------------------------S----S----S-------------------------
--------------------------------------------------------------------------------
------------------S-------------S----------------S------------------------------
--------------------------S----------------------------S-----SS-SS-SSS-------S--
--------S---------------------------------------------S----------S--------------
-------------------------------S-----S-------------------------------------S----
----------------------------S---S-----------------------------------------------
---------------------------S--SSSSSSS-SS-SS-SSSS---S-----S----------------SS----
---S-----S---------S--------S-----------------------S---S----------S------------
----------S--S---------------S----------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S
-S----S-------S-S-------S-SS-----------S-----------------------------S----------
-------------------------S--SSSSS--------S-------S-------S----------------------
----S------------------------------------------------S----S---------------------
----------S-------------------------SSSSS------------S--------S---S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------SSSSSSSSSSSS--------------------------S------S-S----S-------
----------------S-----------------------S--------S---------------S-S---S-------S
SS-S-S-------S----------------------------------------S---------------S---------
-----------------S----S--------------------------------------------------S------
---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_418
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------CG
ATGACCGTTCGCATTGAC--------------------------------------------------------------
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>reverse_2442
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-----------------------------------------ACTCATCGACGATGCCAGTG-------------------
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-----------------------------------------------------------------
>forward_997
--------------------------------------------------------------------------------
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-----------------CAACCAAGCCAGCTGCAATT-------------------------------------------
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-----------------------------------------------------------------
>reverse_2789
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--------------------------------------------------------------------ATGTCCATGTTG
ACGCAGGT------------------------------------------------------------------------
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-----------------------------------------------------------------
>forward_2454
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----------------------------------GGCGAGAACTCATCGACGAT--------------------------
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>reverse_4097
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----------------GCTCCTCTGACGTACTACGC-----------------------------
