>input_sequence_42640
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-----------------------------------------------------GCAGCACGCGCGCGCGCCCAGCCAGTG
AGCCAGACCAGACACGACGACGGCGACGCCGCCGCCGCCGCAGGCCGGGGCCGGTTGGAGACGGGCACGGCCGGCCGGCG
ATGGGGGACAGGGCGGAGTGCAGGTTCCGCACGGTGTGCGTCTTCTGCGGCAGCAGCGCCGGCCGCCGCAGGGTGTTCGG
CGACGCGGCCCTCGACCTTGGCCGCGAGCTGGTAGGCGAATCGGACTGGCTCGGCTTCGCCACCGTG-CGTCTTCTTGTC
AGGTTATAAGCTCTTGAGCTCACGCATGGGGTTGCTCATGC-ACTGGCACAGGTGACGAGGGGCGTCGACCTGGTCTACG
GCGGCGGCAGCATCGGTCTCATGGGCCTCGTCGCGCGGACGGTGCTCGACGGCGGCCGCCGTGTCGTCGGGTACGTCCCT
CCGTATACAACGC-------TTCCTC-TGCTTCTTGCAGAGTGCTCTGGTCTG-CCCGTCTAACACATGCACTGACTGTT
TCTTCGTTCGATCTCTTGGCAGGGTGATTCCCAGGGCTCTCATGCCTGTCGAGGTACGCAATCTCGATGCTTCAGATG--
TTATCTATGTGCTGTACGTAGCATTGTGTATGTCT--------AGTCTAACCAGAGTAAGAAAAGCCCTGCTCGCATGTT
CTGGTTCATGCCGAGACAGTGAAATTGCACTGTGAAAGAAACCATCCTCTCTGCTTCTCTAGGCATACAAGTTCTGGCGA
TTTCCCTGCAATAATAGTAAAAAAAAAACCCGACAGTCTATGTGAATTTGGTCAAGTTTTTGTTTTGTTTTGTTTTGTCA
TCTGAA--------------------------------------------------------------------------
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-----------------------------------------------------TTTAGCCGTACACCTGAAAG-TTCACT
TGGCACGTGTGGTTATCTCAGCTGAATTTGAAGTGTGTGGCAAAACATTCAAATTAATTTCATCTTACTGAAATGACGAC
CATGCAATTTTGGGGGGCAACAGATTGACACAGGTCTGATTTTGTATGTAC------AACAT--TATATCCAGCTTCCGT
TTCTCTGAAAGTTCCACTTTAACTTGTACCAACAGATA------------------------------------------
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-------------------------------------------TTAGGTGAGAGCGTGGGGGAAGTAAAGGTTGTATCTG
ACATGCACGAGAGGAAAGCAGAGATGGCTCGACGATCTGAAGCATTCATCGCTCTTCCAGGTGCCAGACGCTTAACGATC
TTCCTAGTCATTCTACCATCATCGACCGATCGTGGCGCCGATGAGTTAGTATAGCTTGCTTACAATTTTCT-----GTTC
ATCAGGGGGGTACGGAACCATGGAGGAGCTGTTGGAGATGATAACATGGTCCCAACTCGGAATTCACAATAAACCCGTAA
GCAACTGAGCATAACAGATAGATTGTACTGGA-GGACAAATTGGCCATAGTTTTTGCCCCAA------ACGAATC-----
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------GAGCTTTCCGTCGTTAACAAAAATCATACCAATATAGGTTGGGCTGCTCAATGTGGATGGTTACTATGATACCC
TGCTTGCACTGTTTGACAAAGGCGCGAGAGAGGGCTTCATCAACCCAGACTGTACACACATACTTGTCTCAGCGCCAACC
GCCGCGGAATTGCTGACAAAGATGGAGGTGATATGACAATTTTATTGTGAAATCCATCTTTATATTCACACACTACATTT
CCATTTTCCAACTGTGTTTACATGTCCTTTT--CTTCTCTATGTATCCAGCAATACACTCGGTCGCACCAGGAGGTGGCC
CCAGCGACGAGTTGGGAGATCTCAGAGCTTGGCTACACAACAGCACCACCGGCTGATGGATGAACTCTAACATTCATTCC
ACTGATATGATGATGTATTTGTTGTTTTTCTTTAATGTTTTTCCTATTAGCCAAAAGAAATTCAACGTCACGAT------
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>chr1A_1_TraesCS1A01G362500
CCAGCGCCGTCCGGCTAAAATAAACATCCATTCCAACCTGTGCGCGCTTGCGTTTCGCTTTGCCGTTGGCACGTAGCGAT
CGCCCTGCCCCTTGACCTGTGCATTCGGCCACGTTTGACTAACGATCTTGCTAAATGTTAATGATCTTCGATCGCGAGTG
CTAAGCTTTCACCTGCTCGATCGGGACCCGAAACCAAAACCCAAAAAGTGTGTTAGTACAGTACGAGCTG---TTACTGC
CGGTGCCGGACACTGATAGCAGCAGCACGTAAATTTCAGTGGTGAAATGCGC-AGCCCATGCATGCTCCTCGTGCCACAA
AGGAGGCATGCATGATTAGACAGACGATCCAGATTTGCATGGCGTACTGCTGTAGGGTGCGCGACAGAAAGGGATGATGG
TCCATGCCAG------GCGGCAGCGGCACCGGCCAGAACAGTGCGGCCCATGCCGTTATCCTGAGGCGGGGCAGCGGGCA
GTGTGACGGCCTGACGGGACAGGCAGGATTCTCGAGGACGGCAGGGATGGGGACGATTCAGGCCTCCTTTGGTTCATAGG
ATAGGAATAATATAGGAATAAGAAAATCATAGGAAGTGAGATGACATGCATCTCAAATCCTATAAAGAAAGAGATGTCAT
TTGATGTATAGGATAGGATTTTTTCCATTGCTAGGCTAATGTTTTTTCCCTTTAAAATGTGAAGGATTAATTCCTATCCT
ACGTAGGAATAGGAATCCATTCCTATAAACCAAAGGGCTTCAAAGGAATTTTTCTACGAAATTCCTATCCTTTGCAATTC
CTACAATATTCCTATGAACCAAATGAGGCCTCAGAGTTCACAGGCTTTCGTCAGACGACGGGGACCCGGGGACACGGTGA
TTGGTGTCAGTTGTCACGGCGTGGCGTGGTCACCGCGCGCCAAAGCGACAGCGACGGTGGAGTTAAATGGGGGCGGGCGA
TCATCAGCCAGCGTCACTGCCCCTTGCAGCTACCGCCACGCCACCATAA---CGCAGCACGCGCGCGCGCCCAGCCAGTG
AGCCAGACCAGACACGACGACGGCGACGCCGCCGCCGCCGCAGGCCGGGGCCGGTTGGAGACGGGCACGGCCGGCCGGCG
ATGGGGGACAGGGCGGAGTGCAGGTTCCGCACGGTGTGCGTCTTCTGCGGCAGCAGCGCCGGCCGCCGCAGGGTGTTCGG
CGACGCGGCCCTCGACCTTGGCCGCGAGCTGGTAGGCGAATCGGACTGGCTCGGCTTCGCCACCGTG-CGTCTTCTTGTC
AGGTTATAAGCTCTTGAGCTCACGCATGGGGTTGCTCATGC-ACTGGCACAGGTGACGAGGGGCGTCGACCTGGTCTACG
GCGGCGGCAGCATCGGTCTCATGGGCCTCGTCGCGCGGACGGTGCTCGACGGCGGCCGCCGTGTCGTCGGGTACGTCCCT
CCGTATACAACGC-------TTCCTC-TGCTTCTTGCAGAGTGCTCTGGTCTG-CCCGTCTAACACATGCACTGACTGTT
TCTTCGTTCGATCTCTTGGCAGGGTGATTCCCAGGGCTCTCATGCCTGTCGAGGTACGCAATCTCGATGCTTCAGATG--
TTATCTATGTGCTGTACGTAGCATTGTGTATGTCT--------AGTCTAACCAGAGTAAGAAAAGCCCTGCTCGCATGTT
CTGGTTCATGCCGAGACAGTGAAATTGCACTGTGAAAGAAACCATCCTCTCTGCTTCTCTAGGCATACAAGTTCTGGCGA
TTTCCCTGCAATAATAGTAAAAAAAAAACCCGACAGTCTATGTGAATTTGGTCAAGTTTTTGTTTTGTTTTGTTTTGTCA
TCTGAA--------------------------------------------------------------------------
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-----------------------------------------------------TTTAGCCGTACACCTGAAAG-TTCACT
TGGCACGTGTGGTTATCTCAGCTGAATTTGAAGTGTGTGGCAAAACATTCAAATTAATTTCATCTTACTGAAATGACGAC
CATGCAATTTTGGGGGGCAACAGATTGACACAGGTCTGATTTTGTATGTAC------AACAT--TATATCCAGCTTCCGT
TTCTCTGAAAGTTCCACTTTAACTTGTACCAACAGATA------------------------------------------
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-------------------------------------------TTAGGTGAGAGCGTGGGGGAAGTAAAGGTTGTATCTG
ACATGCACGAGAGGAAAGCAGAGATGGCTCGACGATCTGAAGCATTCATCGCTCTTCCAGGTGCCAGACGCTTAACGATC
TTCCTAGTCATTCTACCATCATCGACCGATCGTGGCGCCGATGAGTTAGTATAGCTTGCTTACAATTTTCT-----GTTC
ATCAGGGGGGTACGGAACCATGGAGGAGCTGTTGGAGATGATAACATGGTCCCAACTCGGAATTCACAATAAACCCGTAA
GCAACTGAGCATAACAGATAGATTGTACTGGA-GGACAAATTGGCCATAGTTTTTGCCCCAA------ACGAATC-----
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------GAGCTTTCCGTCGTTAACAAAAATCATACCAATATAGGTTGGGCTGCTCAATGTGGATGGTTACTATGATACCC
TGCTTGCACTGTTTGACAAAGGCGCGAGAGAGGGCTTCATCAACCCAGACTGTACACACATACTTGTCTCAGCGCCAACC
GCCGCGGAATTGCTGACAAAGATGGAGGTGATATGACAATTTTATTGTGAAATCCATCTTTATATTCACACACTACATTT
CCATTTTCCAACTGTGTTTACATGTCCTTTT--CTTCTCTATGTATCCAGCAATACACTCGGTCGCACCAGGAGGTGGCC
CCAGCGACGAGTTGGGAGATCTCAGAGCTTGGCTACACAACAGCACCACCGGCTGATGGATGAACTCTAACATTCATTCC
ACTGATATGATGATGTATTTGTTGTTTTTCTTTAATGTTTTTCCTATTAGCCAAAAGAAATTCAACGTCACGATTGAGAT
ATGATTTTC-TCTTGTGTTTAATTGTACGGTGTGCTGGTCGTTGCCATCTATTGGTTTTCAAGTTTGAATTGCATTACCA
AGTATGT-TTTGTTCTTCTTGCTGTCTACGGTGAATCCAATCCGGCCATTGTTGTACATGTAGAAGCAGCTGGGATATGT
TATAGGTGACTTATACCTTTTTTGTTTTCTTCACAATTTGCAAGCATTCCAAA---------------------------
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----AATCCATAAATAAGTTACAATAGCTATTACGAGTTAAGTAATTAACTCGCTAAAATCCATCTTGTGATCTTGTGCA
CAACTCCACAATGGTCATATTTTTACACCCAAATTTACATAAATATGTTTG-----------TAGAGGGATAGTTCTATA
G-TTTCCATAATTGAGAAGACATGATCTAATATCTATG-------------------------------------TTTAT
--CCAATATAAGGAGTGAATTCCACTCTTTACTTCTTAGTTGGCCATCTGAAAGCTATTATCTCACTACATCAGAATTCT
ACCCGTTTACTCATTTAGTGGCAATATATCTATATTTTATCGTATATAAGTTTCAGACCCATTACAACAGCTCAAGATCA
CATGTTGGCAGCCATTGCATGCCACAACAAATAGGCCACAAGTG-CCC-CACAATACAATGAAAGCTATCGTGGAGTAGT
CTAAAGGAAATGGGGCACTCTTGTCAAGCAACCTCCATGATGACCTTCCTACGCTTTGTTGGCG--ACCGCTGTATGCCG
CCTCTCCCACACCATCATCCGCGCACCACACAAAATCTTTC---------------------------------------
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-------------------------------------------------------------------------TCCAACT
ATACACC-------------------------------------------------------------------------
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----AATGTGGTACTGTGAGTATCA-------------------------------------------------------
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-------------------------------TGCCCTTCAGCTTAGCACACACGTCTTTGATAGATGCACCCAGGCGCGT
GGTAATGGTTCCCGTGTTAGAGACCAGACACTTTATGCTAAGACCAGACTCAACCATGGCTC------------------
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----------------------------------------------GGGGACCTCCGTGTTGTAGTGTCCGGGAGATATA
GGAACCAGCGATCATCGGACCCACAACAACAGGCTCGGGACGTTGCCTACATGTGGTGAGC-------------------
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-------------------------------------------------------------------
>chr1B_1
CCAGCGCCGTCCGGGTAAAATAAACATCCATTCCATCCTGTGCGTGCTTGCGTTTTGCTTTGCCGTTGGCACGTACCGAT
CGCCCTGCCCCTTGACCTGTCCGTTCGGCCACGTTTGACTAGCGATCTTGTTAAATGTTAATGATCTTCGATCGCGAGTG
CTAAGCTTTCACCTGCTCGATCGGGACCCGGAACCAAAA--------GTGTGCTAGTACAGTACCAGCTG---TTACTGC
CGGTGCCGGACACTGAT---AGCAGTACGCAATTTTCAGTGGTGAAATGCGC-AGCCCATGCATGCTCCTCGTGCCACAA
AGGAGGCATGCATGATTC----GACGATCCAGATTTGCATGGTGCACTGTAGTGCCGGT---GACAGAAAGGGATGATGG
TCCATGCGAGGTGGCAGCGGCAGCGGCACCGGCCAGAACAGTGCGGCCCATGCCGTTATCCTGAGGCGGGGCAGCGGGCA
GTGTGACGG--------GACAGGCAGGATTCTCGAGGACGGCGGGGACGGGGACGAT-----------------------
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------------------------------TCAGAGTTTACAGGCTTTCGTCAGAAGACGGGGACACGGGGCCACGGTGA
TTGGTGTCAGTTGTCACGGCGTGGCGTGGTCACCGCGCGCCAAAGTGACAGCGACGGTGGAGTTAAATGGA----GGCGA
TCATCAGCCAGCGTCACTGCCCTGTGCAGCTACCGCCACGCCACCATAATAACGCAGCAAGCGCAAGCGCGCAGCCAGG-
-------CCAGACACGACGACGGCGACGCCGCCGCCGCAA---GCCGAGGCCGGTTGGAGGCGGGCACGGCCGGCCGGCG
ATGGGGGACAGGGCGTCGTGCAGGTTCCGCACGGTGTGCGTCTTCTGCGGCAGCAGCGCCGGCAAACGCAGGGTGTTCGG
CGATGCGGCCCTCGACCTTGGCCGCGAGCTGGTAGGCGGATCGGACTGACTCGGCTTTGACACCGTG-CGTCCTCTTGTC
AAGT--TAAGCTCTTGAGCTCACGCATGGGGTTGCTCATGCCACTGGTGCAGGTGACGAGGGGCGTCGACCTGGTCTACG
GCGGCGGCAGCATCGGGCTCATGGGCCTTGTCGCGCGGACGGTGCTCGACGGCGGCCGCCGTGTCGTCGGGTACGTCCCT
TTCTATACAACGC-------TTCCTC-TGCTTCTTGCAGAGTGCTCTGCTCTG-CCTGTTTAACACATGCACTGAATGTT
TCTTCGTTCCATTTCTTGGCAGGGTGATTCCCAGGGCTCTCATGCCTGTCGAGGTA-----------TGCTTCAGATTTT
TTATCTCTGTCCTGCACGTAGCATTGTGTAAGTCT--------AGCCT-ACCAGAGTAAGGAAAGCTCTGCTCTCATGTT
CTCATCCATGCTGAGATAGTGAAATTGCACTATGAAAGAAACCATCCTCTCTACTTCTCTAGGCATACAGGTTCTG-CAA
TTTCCCTGCAATAATAATATTAGGA-----CGACAATTTATGTGAATATGGTCAAGTTTT-----TGTTTTGTTTTGTCA
TCTGAA--------------------------------------------------------------------------
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-----------------------------------------------------TTTAGCCGTGCACCTGAAAAATTCACT
TGCCACATGAGGTTATCTCAGCTGAATTTGAAGTGTGTGGCAAAACATTCAAATTAAGTTCATCTTACTGAAATGACGAC
--------------------------GACGCAGGTCTGATTTTGTACTTAC------AACATATTATATCCAGCTGATGT
TTCTCTGAAAGTTTCACTTCAATTTGTACTGACAGATA------------------------------------------
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-------------------------------------------TTAGGTGAGAGTGTGGGGGAAGTAAAGGTTGTGTCTG
ACATGCACGAGAGGAAAGCAGAGATGGCTCGACGATCTGAAGCATTCATCGCTCTTCCAGGTGCCACACGCTTAACGATC
TTCCTAGTCATTCTACCATCATCGACCGGTCGTCGCGCTGATGAGTTAGTATAGCTTCCTTACAATTTTCT-----GTTC
ATAAGGGGGGTATGGAACCATGGAGGAGCTGTTGGAGATGATAACATGGTCCCAACTCGGAATTCACAACAAACCTGTAA
GCAACCGAGCGTAACAGATAGTTTGTACTGCG-TGACAAATTGGCCGCAGTTTTTGCCCCAA------AAGAGTC-----
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------AAGCTTTCCATCGCTAATCAAAATTATACCAATATAGGTTGGGTTGCTGAATGTGGATGGTTACTATGATACCC
TGCTTGCCCTATTTGACAAAGGCGCGCGAGAGGGCTTCATCAACCCAGACTGTACACACATACTTGTCTCAGCGCCGACC
GCCACGGAATTGCTGACAAAGATGGAGGTGATTTGATAATTTCGTTGTGACATCCATCTTTATATTCCCGCACAATATTT
T-------CAAATGTGTTTACATGTCCTTTT--CTTCTCCATGTGTCCAGGAATACACTAGGTCGCACCAAGAGGTGGCC
CCAACGACGAGTTGGGAGATCTCAGATCTTGGCTACACAAAAGCACCACCGGCTGACGGATGAACTCTAACATTCATTCC
ACTGATATGATGATGCATTTGTTGTTTTTCTTTAATGTTTTTCCTATTAGCCAAAAGAAATTCAACGTTACGATTGAGAT
ATGATTTTC-TCTTGTGTTTAATTGTACGGTGTGCTTGTTGTTGCCATATA-TGGTTTTCACGTTTGAATTGCATTACCA
AGTATGT-TT-GTTCTTCTTGTTGTCTACGATGAATCTGATCAGGCCATCATTGTACACGTAGAAGCAGTTGTGATATGT
TATTGGTGACTTATACTTTTTTCGTTTTCTTTGCAATTTGCAAGCATTGCAAAATAT-----------------------
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--------CATAAATAAGTAACAATAGCTATTACAAGTTAAGTAATTGACCGGCCAAAATCAATCTTGTGATCTTGTGCA
CAACTCCATAGTGGTCATATTTTTACAGCCAAATTTACAGAAATACGTTTTTATAGCTTCTCTAGAGGGATAGTTGTATT
GTTTCCCATACCTGAGAAGACGTGATATATTATCTATAGTTTTTTGACTATATACTGTGAGGGATCTATTATCTATGTTT
ATCCAATATAACGAGTGAATTCCAATTTTTACTTCTTAGTTGGCCATCCGAAAGCTATTATCTCATTTTACGAGAATTCT
ACCAATTTACTCATTTAGTTGAAATATATCTATATTTTATGGTATATAAGTTTTGGACCCATTACAACAGCTCAAGATCA
CATGTTTGCAGCCATGGCATGCCACAACGAATAGGCCACGAGTG-CCCCCACAATACAATGAAAGCCGTCGTGGAGTAGT
TTAAAGCAAATGGGGCACTCTTGCCAAGCAACCTCCATGATGACCTTCCTATGCTTTGTTGGCG--ACCGATGTATGCCG
CCTCTTCCACACCATCATCCGCGCACCACACAAAATCTTGC---------------------------------------
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-------------------------------------------------------------------------TCCAGCT
ATAAACC-------------------------------------------------------------------------
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----AATGTGGTACTATGAGTATC--------------------------------------------------------
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----------------------------------CCTTCAGCTCAGTGCGCACGTCCTCGATAGATGCACCCAGGCGTG-
-----TGGTTCCCGTGTTAGAGACCATCCACTTTATGCTGAGACCAGGCTCAACCATGGCTC------------------
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----------------------------------------------GAGGACCTCCATGTTGTAGCGTCGGGGAGATATA
GGAACCAACGATCATTCGATCCACAACAACAGGCTCGGGACGTTGTCGAAATGTGGAGAGC-------------------
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>chr1D_1
CCAGCGCCATCCGGGTAAAATAAACATCCATTCCATCCTGTGCGCGCTTGCGTTCCGCTTTGCCGTTGGCACGCAGCGAT
CGCCCTGCCCCTTGACCTGTC------GCCACGTTTGACTAACGATCTTGTTAAATGTTAATGATTTTCGATCGCGAGTG
CTAAGCTTTCACCTGCTCGATCGGGACCCGGAACCAAAA--------GTGTGCTAGTACAGTACTAGCTGTTATTACTGC
CGGTGCCGGACACTGAT---AGCAGTACGTAAATTTCAGTGGTGAAATGCGCCAGCCCATGCATGCTCCTCGTGCCACAA
AGGAGGCATGCATGATTA----CACGATCCAGATTTGCATGGCGTACTGCTGTAGGGTGCGCGACAGAAAGGGATGATGG
TCCATGCCAGGCGGCAGCGGCAGCGGCACCGGCCAGAACAGTGCGGCCCATGCCGTTATCCTGAGGCGGGGCAGCGGGCA
GTGTGACGGCCTGACGGGACAGGCAGGATTCTCGAGGACGGCGGGGACGGGGACGAT-----------------------
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------------------------------TCAGAGTTTACAGGCTTTCGTCAGACGGCGGGGACACGGGGCCACGGTGA
TTGGTGTCAGTTGTCACGGCGTGGCGTGGTCACCGCGCGCCAAAGCGACAGCGACGGTGGAGTTAAATGGGGGCGGGCGA
TCATCAGCCAGCGTCACTGCTCTTTGCAGCTACTGCCACACCACCATAA---CGCAGCAAGCAAGCGCGCGCGACAAGG-
-------CCAGACACGACGACGGCGACGCCGCCGCCGCAA---GCCGTGGCCGGTTGGAGGCGGGCACGACCGGCCGGCG
ATGGGGGACAGGGCGGAGTGCAGGTTCCGCACGGTGTGCGTCTTCTGCGGCAGCAGCGCTGGCCGACGCAGGGTGTTCGG
CGACGCGGCCCTCGACCTTGGCCACGAGCTGGTAGGCGAATCGGACTGGCTCGGCTTTGCCACCGTGCCGTCTTCTTGTC
AAGT--TAAGCTCTTGAGCTCACGCATGGGGTTGCTCATG-CACTGGCGCAGGTGAGGAGGGGCGTCGACCTGGTCTACG
GCGGCGGCAGCATCGGCCTCATGGGCCTCGTCGCGCGGACGGTGCTCGACGGTGGCCGCCGTGTCGTCGGGTACGTCCCT
CCGTACACAACGC-------TTCCTC-TGCTTCTTGGAGAGTGCTCTGCTCTG-CTTGTCTTG-------ACTGAGTGTT
TCTCCGTTCCATCTGTTGACAGGGTGATTCCCAGGGCTCTCATGCCTGTCGAGGTACGCAATCTCGATGCTTCAGA-TTT
TTATCTATGTGCTGTACGTAGCATTGTGTATGTCT--------AGTGTAACCAGAGTATAATAG----------------
------------------------------------------------------------------------------AA
TTTCCCGGCGATAATAATAACAAAA-----CGACAATTTATGTGAATTTGGTCAAGTTTT-----TGTTTTGTTTTGTCA
TCTGAA--------------------------------------------------------------------------
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-----------------------------------------------------TTTAGCCGTACACCTGAAAAATTCATT
GGCCACATGAGGTTATCTCAGCTGAATTTGAAGTGTGTGGCAAAACATTCAAATTAAGTTCATCTTACTCAAATGACGAC
CATGCAAATTTGGGGGGCGAGGGATTGAGGCAGGTCTGATTTTGTATGTACTCGTACAACAT--TATATTTTGTAGTCGT
TTCTCTGAAAGTTTCATTTTTATTTGTACAAACAGATA------------------------------------------
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-------------------------------------------TTAGGTGAGAGTGTGGGAGAAGTAAAGGTTGTATCTG
ACATGCATGGGAGGAAAGCAGAGATGGCTCGACGATCCGAGGCATTCATCGCTCTTCCTGGTACCACATGCTTAACGATC
TTCTTAATCAGTCTACCATTATCGACCGA---TCGTGCTCATACGTTAGAAGAGCTTGCTTACAATTTTCTTTTATGTTC
ATCAGGGGGGTACGGAACCATGGAGGAGCTGTTGGAGATGATAACATGGTCTCAATTGGGAATTCACAACAAACCTGTAA
GCAACAAAGCATAACAGATAGATAT---TGCA-TGGCAAATTGGCCGCAGTTTTTCCCCCAAACCCAAACGAATA-----
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------GAGCTTTCTGTTGCTAACAAACATCATACCAATATAGGTTGGGTTGCTAAATGTGGATGGTTACTATGATACCC
TGCTTGCACTGTTTGACAAAGGTGCGAGAGAGGGCTTCATCAACGCAGACTGTACACACATACTTGTCTCAGCGCCAACT
GCTGCGGAATTGCTGACAAAGATGGAGGTGATTTGACAATTTTGTTGTGAAATCCATCTTTATATTCACACACTACATTT
CCATTTTCCAAATGTGTTTACATGTCCTTTT--CTTCTCTATGTATCTAGCAATACACTCGGTCGCACCAGGAGGTGGCC
CCAGCGACGAGTTGGGAGATCTCAGAGCTTGGCTACGCAAAAGCACCACCGGCTGATGGATGAACTCTAACATTCATTCC
ACTGATATGATGATGTATTTGTTGTTTTTCTTTAATGTTTTTCCTATTAGTCAAAAGAAATTCAGCGTCACGGTTGAGAT
ATGATTTTC-TCTTGTGTTTAATTGTACGGTGTGCTGGTCGTTGCCATCTA-TAGTTTTCAAGTTTGAATTGCATTACCA
AGTATGT-TTTGTTATTCTTGCTGTCTACGGTGAATCCAATCAGGCCATCGTTGTACACGTAGAAGCAGCTGGGATATGT
TATAGGTGAATTGTACCTTTTTCGTTTTCTTCGCAATTTGCAAGGATTCCAAT---------------------------
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----AATCCATAAATAAGTTACAATAGCTATTACGAGTTAAGTAATTGACTGGCCAAAATCCATCTTGTGATCTTGTGCA
CAATTCCATAGTGGTCATATTTTTACACCCAAATTTACATAAATATGTTTGTATAGCTTCTCTACAGGGATTGTTCTATA
GTTTTCCATAATTGAGAAGACATGAACTATTATCTATG-------------------------------------TTTAT
AGCCAATATAACGAGTGAATTCCACTTTTTACTTCTTAGTTGGCCATCTGAAAGTTGTTATCTCACTTTACGAGAATTCT
ACCAGTTTACTCATTTAGTGGCAATATATCTATATTTTATCGTATATAAGTTTCGGACCCATTACAACAACTCAAGATCA
CATGTTGGCAGCCATGGCATGCCACAACGAATAGGCCATGAGTG-CCC-CACAATACAATGAAAGCTGTCGTGGAATAGT
TTAAAGCAATTGGGGCACTCTTGTCGAGCAACCTCCATGATGACCTTCCTACGCTTTGTTCGCG--ACCGCTGTATGCCG
CTTCTTCTACACCATCATCTGCGCACCACACAAAATCTTTC---------------------------------------
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-------------------------------------------------------------------------TCCAGCT
ATACACC-------------------------------------------------------------------------
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----AATGTGGTACTGTGAGTATCA-------------------------------------------------------
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-------------------------------TGCCCTTCAGCTCAGCGTGCACGTCGTTGATAGATGCACCCAAGCGTG-
-----TGGTTCCCGCGTTAGAGACTAGCCACATTATGCTGAGACCACACTCAACCATGGCTC------------------
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----------------------------------------------GGGGACCTCCCTGTTGTAGCGTCCGGGAGATATA
GGAACCGATCGTC---CGACCCACAACAACAGGCTCGGGGCGTTGCCGACATGTGGTGAGC-------------------
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>chr1A_1315
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-------------------------------------------------CAGGTGAGTAGGGACGTTGACCTGGCCCACG
GCGGCGGCAGCATCGGCCTCATAGGCCTCATCGCGCAGACGGTGCTCGACGGCGGCCGCATTGTCGTCGGGTATACAACG
CTTCCTCTGCACGACAAGTTTTCCTC-TGCTTCTTGCAGACTGCTCTGCTCTG-CC-GTCTAACACATGCACTGACTGTT
TCT-CGTTCGATCTCTTGGCAGGGTGATTCTCAGGGCTCTCATGCCTATCGAGGTA------------------------
---------TGCTGTACGTAGCATTGTGTATGTCCACTTGTCCAGCCT-AGCAGAGTAAGAAAAGTTCTGCTCCCATGTT
CTGATTCATAC--------TGAAATTGTACTGCGAAAGAAGCCATCCTGTCTACTTCTCTAGCCATTGTGTAA--GGCAA
CTTTCCTGCAATAATAGTAATAAAA-----AGATAATTTAGGTGAATTTGGTCAAGGTTT-----TGTTTTGTTTTGTCA
TCTGAGTTCAGCGAGTATTTAACCAAAAACTACCACATTTCACGGAAACGTAACAGAAAACTACCACTTTACGATTTCGT
GCGGAAAACTACCACTTTTGTCCTAATACGTGGCAAAAAACTACGAAGTCTCGAAACCGGTCGCTTCATCCGCACTAAGC
ATCAAACTGACCAGTCGGTCCCACGTTTCAGGTGCCACGGTGGCCAACCGACTCCCGCCGCGCGTTAACCCGTTAACGGC
GCGTCCGCGGTCGGAAACGGCGGCTGTCGGTTTGCGTTCAATGCAAGGTTTTGGTGCATTGAACGCAAACCGACTTAACG
CACGGCGGGCATCGGTTGACCACCGTGGCACCTGAAACGTGGGACGGGCTAGTCAGTTTGGTGCTTAGCACGGGCGAAGC
GACCAGTTTCGAGACTTGGTAGTTTTTTGCCACGGATTAGGATAAAAGTGGTAGTTTTCCGCATAAAATCGTAAAGTGAT
AGTTTTCTGTCACGTATCCGTGAAATGTGGTAGTTTTTGGTTAAATACTCGAGTTCAGCCGTACACCTGAAAA-GTCACT
TGGCGCAT------------------------------------------------------------------------
------------------GAGGGATTGACGCAGGTCTGATTTTGTACGTAC------AACAT--TATATCCAGCCGCTGT
TTCCCTGAAAGTTTCACTTCAATTTGTACTAACAGATA------------------------------------------
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-------------------------------------------TTAGGTGAGAGTGTGGGAGAAGTGAAGGTTGTATCTG
ACATGCAAGGGAGGAAAGCAGAGATGGCCCGATGATCTGAAGCATTCATCGCTCTTCCAGGTGCCACAGGCATAGTGATC
TTTCTAATCATTATATCATTATCAATCAA---TCGCATTCATAAGTTAGTAGAGCTTGCTTACAATTTTCTGTTCATCA-
-----GGTGGTACGGAACCATGGAGGAGCTGTTGGAGATGATGACATGGTCCCAACTCAGAATTCACAAGAAACCTGTAA
GCAACCGAGCATAATAGATAGATTGTACTTCATGGAAAATTTGGCCGCAGTTTTTACGCCAA------GAGTAACTTCAA
CATGCTCCTTCTTACCCTCCCTTTTCACATGTGATGTAAAAAAAATAAGAGTTAATTAGACCACTACTTAACCAAATCAA
TGACTCAGATATGTTATGTACTTTTACCTCTCGTGTGAAGAGGTGGGGGGGGGGGGGATTTGCCTTACGCCAAACCTAAA
TAAACTGAGATTTCCTTTGCTTATAAAAATCATATCAATATAGGACTTCCTGCTAAATGATGATGGTTAGTATGATCCCC
TGCTTGCATTGTTTGACAAAGGGGTCGGAGAGGGCTTCATCAACCCAGATTGTACAGACATACTTGTCTCGGCGCCAACC
GCCACTGAATTGTTGACAAAGATGGAGGTGATTTGATAATTTTGTTGTGACATCTATCTTTATATTCCTGTACTATGTTC
T-------CAAATGTGTTTACATGTCCTTTTTTCTTCTCTGTGTGTCCAGTAATACACTTGGTCGCACCAGGAGGTTTCC
CGAGCAAAGAGTTGGGAGATCTCAGAGTTTGGTTACACAAAAGCACCACTGACAAATGGATGAACTTTACCATTCATTCC
ACTGATATGATGATGCACTTGTTGTTTTTCTTTGATATTTTTCCTACGTGCCAAAAGAAATTCAACATCACGATTGGGGT
ATTATTTTTGTCTTGTGTTTAACTGTACGGTGTGCTTGTCATTGCAATGTATGG--TTTCAAGTTTGAATTGCATTGCGA
AGTGTATGTTTGTTCTTCTTGCTCTCTACGGTGAACTCGATCCAGTCATAGGTGTACATATAGAAGCAGCCGAGACATAT
TTTACGTGATGTATACCTT-----TTTTTTTCACAATTTACAAGCATTGCAAAAAACCGTAGCCCTGTCTGGTGCGACTC
GGCGGCGTCTACCCATCGAGTCTGTGGCACATGGGCTCGCAGCACATGCAAGAATGTTTGGAGATCATATCACACTTAGA
GATGTGCCTAGCCGATTGCGGAATATTGCTTGTAATGAACATGTGACAATGAAAATGTAATGGGTGTCTTACCCCTAAAA
ACAAAATCTGTAAATAAGTCAAAGTAGCTATTATAAATTAAGTAATTGACTGGCCAAAATCCATCTTGTGATCTGGTGGA
CAACTCCATCATGGTCATATTTTCGTACCCACATTTACATAAATATCTTTGTATACCTTCTCTAGAGGGATAGTTTCATA
GTTTTCAATAACTGAGAAAACATGATCTATTATCTA-G-------------------------------------AGTTT
AACCAATATAA-GAGTGTATTCCACTTTTTAGTTCTTAGTTGGCCATCTGAAAGCTATTATCCCATTTTACGAGAATTCT
ACCAAATTACTCATTTAGTTGAAATATATAGACATTTTATCATGTATAAATTTTGTACCCACTATGACAGCTCGAGATCA
TATGTTGGCAGCCATGACATGCCACATCAAATAGGCCACGACTGCCGC-CACAATACAATGAAAGCTGTTGTGGAGTAAT
TCAA--------------------------------------------------------------------------CG
TAAATGTTCCTCTAGCACACGGTGCCCACGAAGTTCGCAGTATGCACACACAAGCCACACAACAAAGTGGATGTTGTTGC
CTCAACTAAAGCCGTACATAGTATACAGTAACAAATGCAATTAATCAAAATGTAGGTGCCATATCAAATTCTCACTCGTT
CTCTCCCAAGAGAAGGTAATATAAGTCAGCCGATGAAGCATCGATCCCATGCTATGCTCAATACTAGAGGATTTCCAACT
ATACTTTTCCAAAACCATTTTGTTGTTATCTACGTCTCCATGTACATAGC----------AAAAAAACAAAGGCATGCTA
GGATTTAGAGGCATTAGGAGTGACACTTCCACGGAAATCTCAAGACACTGTATGCTTCACGTGTCTACTATAATCTGAAT
TTACTATCCAGAACTTCTGTCCGTGTACGTGTGTGTCTATTATTATCCTGCTCGTGTTGCCGGTCTGCTTATGACCCAAT
TTTCTAATCATGCTTATTTCACTGAAAATTGAGCGTTAGTAAAATAGAGTTGCTCACAGTGTAGCTAGTATTGACTGATC
TGATGGTAATACCGCTTGTTGGTTGCGCTGAGTGCCAGACAATGTTACTCATTTTGTAGCAGCTGACTACAATTCTTTCC
AAGGAATAAAACCCACATTATCTGGCAAAGGAAG-GAAAATATCACGTAATGTCTTTTTACGAAAAAGATAAGATCTATT
ATAAAGATTTATCAGAAGTACAAAACACTTCAAACATAACAAAAATTACATCCACATCTATGAACCACCGAGCGATCACT
GCTGCCGCCAGAGCAAGCCGCCGACGCGCAGCTGTCGCCGCTCCCATATCAGAGCCGGTTTGACCTTGTCAATGATAGCC
GGGAAGTCTTCATGCACGAGCCCGTAAGGACCAGCGTCCCGGAGCCGCAGTCGTGGCTACCGAATCCTTGAATCGATCTG
AAGAATCTGACACCAAATATCGTTGTTGCGTAGCACGACGAGAAACCTCAACCTCGTCGCCTCGAAGTGCTGGCAGGAAT
CTACGTCAGAGCTTCGTCTAATCCGTCACAACAGACGAATTTGAGGAGGATCAGAGCCTGGAAGATTGACTCGAAGAAGA
AGTGTCGCCATCCGTGCAAATACCGCCCCTGCGAGGACTAAAACCCTACCTATTTGCTAGTTGGATCCGAGGCACCAAAA
ATCCCCTCCCCGCCACCGGCCATCGGAGCAGCGCGCGAAAAGGGGAGGGGGGAAAATCCACGGGCTTGTCGGTGAAGATC
ATGGAGAAAAAGACTTTTCCTAGTCGCCTTACGAGAGGGGAAAGAAAAGCTCTCATGTCGAGGGATTCTAATATCACGTA
CTAACCCATGAAATCGTTGAGCTGGTATACCTCCGAATTATGTCATTTAGTATTCAATCTGCTTAGAAACTAAACATAGT
ACAACTAGTATCATCTGTGTATAAATGGATTTGGACATTGAACTGGTCGTTCCTTTTTTTCTTTTGCATTTCCAGGTGAG
GAGGGACGTCGACCTGGTCTACGGCGGCGGCAGCATCGGCCTCATCATAGGCCTTATCGCGCGGACGGTGCTCGACAGCG
GCCGCGTTGTCGTTGAGTGTACAACGCTTCCTGTGCATTACTCCGCAGAGTGCTCTGCTCTGCTCATCATGTACAAGTTT
TCCTCTGCTTCTTGCAGAGTGCTCTGCTCTTCCCGTGTAACACATGCACCGACTGTTTCTTCGTTCGATCTCTTGGCAGG
GTGATTTTCAGGGCTCTCATGCTGTACGTAGCATTGTTTATGTCCAGTTCATCAGAGTAAGAGCATCTACAGCTGGACTT
GACAAATCCGGTCCTTTATATATCCACGGACGCGTCCAGACAAGCTCGTGGACACATCCGGACGAGCCCCTATATCTCGC
TCCCGGCATTCTCATATCTTAATCTAAACTCTTAAATTTATGCAAATCTATGCATGTCGATCATACATGTTAATGTCACA
CGTGAATAAAAAATGTTGGTTTTGAAAATTAATAGTGTTTACATAAACTTTTTTTTAAGTGCACAACTCAAACATCAGCT
CTTTGGTTTCCACTGTGGATCCACATATGCTTCACAAGATCGTTGAGTAGCTGCGTGTGCACTTGATGATCTGGAAGATT
CTGATGCATCCGTAGAAATTCATAAGTTGAGCTTCATTTTGATCTTTCGGGATTTGAACTTTTTCTCTAGGCGCTTCAAA
TTATTGGTTTGGGCGACATCAGACCCTCATCCTCGATATCATACTGTGCAAAATAACAGAACATGTCATGAACTGACACA
AACTTTCTGATTCTCACATCATTGCGGTCTCACGAACAATTCCCCAACGAGCTTGAAGCACTCCGAATGCCCTCTCCACA
TCCTTTCTAACTGTTGCCTACATTGTTTCAAAGTGGCTTTGTTTCCTGCCCTGTGGTTCGGGTATGGTCTTCACAAACAC
TGACCACTGAGGATAGATGCCATCGGCAAGATAGTACCCTATGTTGTAATCACAGTCGTTGACGGTGTAGTTGCACGACA
ATGATTCCCCATTGCAAAGCATCCTGAACACCGGAGATCGTTGAAGCACGACGACATCGTTGTGAGAATCCATCATTCCA
AAGAAAGCATGTCAAATCCATAAGTCATGTGATGCCACCGCTTTTAGTATGATGGTGGCCCCTTTGGTGTGATCTTGATA
CATTCCCCACATAACCTTGGGACAGTTCTTCCATTATCAATCCATGCAATCAATTGATCTGAGCATTCCGAGAAACCCTC
TAGCCTCTCCAATTGCCAACAACTTCTCCGTGTCCTACGCAATTGGTTCTCTCAGATACTCTGCTCCAAACACCCGCACC
ATGGCGCGGGCAAACTTGACAGTAGTCTTGAGGCATGTGCTCTCCCCCATCCTGACCATCTCACCGATGGCATCTGCGGC
AGTACCAAGTGAGGCATCCTCACAGCAGCCGTGCACTTCTGCTTAGCACAGAAAGAAAGTTGACCGCTACAATTCCTTGT
GAGCTTGAAGTAATCATCGTGTGCCTCCACTCCCTCCACAGTGTACAAAAATAGTGGTTTTCCGCATGCGAAAACCGTGA
CAAAACCATGAATCACTTGGGAAAGTTGGGTTCGGAGTAAAGTAGTCCTTCTGTAGTAGCCGTGCTCCGAGCACCCTATC
CCGATTGATCATTCTTCTTCCTTTGATTGAGCCCTTGAAAATAAGAATATTCTCCACTTGCCGGTCCATTTCCTCTTGCA
TGCTCATGAGCATGATCATATCCACTTCTTCGTCCGAAGCCGAGGAATCAAAGAACTCATCTTGAATCATTTGATCAAAC
TCCATTGGTCCATACTCCTCATCGGACAAAGCATCGAAATTCATCATTTTCCGTAAAAAAAAACAAGGTCGGACAATGTA
CCGAACACATAGAATGCAAGGGGGAGCTCGGAGTTGCCGAACGTACCGCGGTGGCGTATGGGCGAGCGACAACGTCCCCA
ACGGCGAGGACGGGAGACAAGAGTGATGTGCCGGTGCTGACAGCGCAGACGCTCGGAATGACTATGCAGCGTGCGTGGTG
GCGGAGCTGTGAGACGGATGTCATGGAGGAGGAAGAAGATAGGAAAGAGCAAATGGATCTGGTAGGGCCGGGGAGGGGGT
GGATTTGGTGCAATTTACGGCGGGGTCGGGCTGTCAGGTCCGACGTGCGGACGCGCCCGGGCGCCCCCGTATCCGCCCCA
TATTTAGGCTACATATGAGGGGTGCCGCTGCTTGCTGTTTTCTTTGATGTTTTTCTATGTGCCAAAAGAAATTCAACATC
ACGATTGTGATATTATTTTCTCTTGTGTTTAACTGTACGTCGTGCTTGTCATTGCAATGTATGATTTCAAGTTTGAATTG
CATTGCGAAGTGCATGTTTGTTCTTCTTGTTGTCTACGGTGAATCCGATCCAGTCATGGTTGTACATGTAGAAGCAGCTG
AGACATATTATAGGTGACGTATACCTTTCTTTTTTACAATTTACAAGCATTGCAAAAGACCGTAGCCCTGTCTGATGCGA
CTCAGCAGCGGCTACCCATTGGGTCTGCGGCACATGGGCTTGCAGCTCATGCAAGAATGTTTGGAGATCATATCACACTC
AGATATGTGCCTTTGAAAATAGGGAGGCGAACTGTGAGGCTCATGTCTTGACAAAAGCAGCCTCGACATTCCCTATTGGT
CAACATGTGTGACTAGGAAACACAGCAGACATCATTTATATCCCGTCAGTTTTGGTCGATAAATAAAACCCCAGTTACAC
CTAAAAAAAAGATATGTGCCTAATCGATTGCCGAATATTGCTTGTAATTAACATATGTGACAATGGAAATGTAATGGGTG
TCTTACCCCTAAAAGCAAAATCTGTAAATAAGTCAAAGTAGCTATTATAAATTAAGTAATTGACCGGGGAAAATCCATCT
TGTGATCTTGTGCACAACTCCATAGTGGTCATATCTTCATACCCACATTTACATAGATATGTTTGTA
>chr1D_1315
AAAAT---------------------------------------------------------------------------
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-------CCGTAAATAAGTCAAAGTAGCTATTATAAATTAAGTAATTGACTGGCCAAAATCCATCTTGTGATCTTGTGGA
CAACTCCATTGTGGTCATATTTTCGTACCCACATTTACATAAATATGTTTGTATACCTTCTCTAGAGGGATAGTTTCATA
GTTTTCAATAACTGAGAAAACGTGATCTATTATCTA-G-------------------------------------AGTTT
AACCAATATAACGAGTGTATTCCACTTTTTAGTTCTTAGTTGGCCATCTGAAAGCTATTATCCCATTTCATGAGAATTCT
ACCAAATTACTCATTTAGTTGAAATATATCTACATTTTATCATATATAAATTCTGTACCCACTATGACAGCTCGAGATCG
CATGTTGGCAGCCATGACATGCCACATCGAATAGGCCACGACTGCCCC-CACAATACAATGAAAGCTGTTGTGGAGTAAT
TTAATT---------------------------------------------------------------------TAACG
TAAATGTCCCTCTAACACACGGCGCCCACGAATTCCACGGTATGCACACACAAGCCACACAACAGAGTGGATGTTGTTGC
CTCGACTAAAGCCGTACATAGTATACAGTAACAAATGCAATTAATCAAAATGTAGGTGCCATATCAAATTCTCACTCGTT
CTCTCCCAAGAGAAGGTAATATAAGTCAGCCGAAGAAGCATCGATCCCATGCTATGCTCAATACTAGAGGATTTCCAACT
ATACTTTTTCAAAACCATTTTGTTGTTATCTACGTCTCCATGTACATAGCAAAAAAAAAAAAAAAAACAAAGGCATGCTA
GGATTTAGAGGCATTAGGAGTGACACTTCCACGGAAATCTCA-GACACTGTATGCTCCACGTGTCTACTATAATCTGAAT
TTACTATCCAGAACTTCTGTCCCTGTACGTGTGTGTCTATTATTATCCTGCTCGTGTTGCCGGTCTGCTTATGACCCAAT
TTTCTAATCATGCTTATTCCATTGAAAATTGAGCATTAGTAAAATAGAGTTGCTCACAGTGTAGCTAGTATTAACTGATC
TGGTGGTAGTACCGCTTGTTGGTTGCGCTGAGTGCCAGACAATGTTACTCATTTTGAAGCAGCTGACTGCAATTCTTTCT
GAGGAATAAAATCCACATTATCTGGCAAAAAGAAAGAAAATATCACGTAATGTCTTTTTACGAAAAAGATAAGATCTATT
ATAAAGATTCATTAGAAGTACAAAACACTTCAAACATAATAAAAATTACATCCACATCTATGAACCACCGAGCGACCACT
GCTGCCGCCAGAGCAAGCCGCCGACGTGCAGCT----CCGCTCTCATATCAGAGCAGGTTTGACCTTGTCAATGATAGCC
GGGAAGTCTTCATGCACGAGCCCGTAAGGACCAGCGCCCCGGAGCCGCAGTCGTGGCTGTCGAATCCTTGAATCGATCTG
AAGAATCTGACACCAAATATCGTTGTTGCGTAGCACGACGAGAAACCCTAACCTCGCCGCCTCGAAGCGCTGGCAGGAAT
CTACGCCGGAGCTTCGTCTAATCCGTCCCAACGGACGAATTTGAGGAGGATCAGAGCCCGAAAGATTGACTCGAAGAAGA
AGCGTCGCCGTCCGTGCAAATACCGCCCCTGCGAGGACTATAACCCTACCTATTTGCTAGTTGGATCCGAGGCACCAAAA
ATCCCCTGCCCGCCACCGGCCGTCGGAGCAGCGGGCGAAAGCGGGAGG-GGGGAAATCCATGGGCTCGTCGGTGGAGATT
ATGGAGAAGAAGGCTTTTCCTAGTCGCCTTGCGAGAGGGGAAAGAAAAGCTCTCATGTCGAGGGATTCTAATATCACGTA
CTAACCCATCAAATCATTGAGCTGGTATACCTCCGAATTATGTCATTTAGTATTCGACCTGCTTAGAAACTAAACATAGT
ACAACTAGTATCATCTGTGTATAAATGGATTTGGACATTGAACTGGTCGTTCCTTCTCTTTTTTTGCATTTCCAGGTGCG
GAGGGACGTCGACCTGGTCTACGGCGGCGGCAGCATCGGCCTCATCATAGGCCTCATCGCGCGGACAGTGCTCGACAGCG
GCCGCGTTGTCGTCGAGTGTACAACGCTTCCTCTGCACTACTCCGCAGAGTGCTCTGCTCTGCTCATCATGTACAAGTTT
TCCTCTGCTTCTTGCAGAGTGCTCTGCTCTGCCCGTCTAACACATGCACCGACTGTTTCTTCGTTCGATCTCTTGGCAGG
GTGATTTTCAGGGCTCTCATGC----------------------------------------------------------
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>chr1D_1376
--------------------------------------------------------------------------------
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------------------------------TCGCGCGGACGGTGCTCGACGGCGGCCGCCTTGTCATCGGGTATACAACG
CTTCCTCTGCACTACAAGTTTTCCTCTTGCTTCTTGCAGAGTGCTCTGCTCTGCCC-GTCTAACACATGCACTGACTGTT
TCTTCGTTCGATCTCTTGGCAGGGTGATTCTCATGGCTCTCATGCCTATCGAGGTA------------------------
---------TGCTGCACGTAGCATTGTGTATGTCCAGT--------CT-AGCAGAGTAAGAAAAGTTCTGCTCCCATATT
CTGATTCATACG--------GAAATTGCACTGCAAAAGAAGCCATCCTGTCTACTTCTCTAGTCATACAAGTTCTGGCAA
CTTTCCTGCAATAATAGTAATAAAA-----AGATAATTTAGATGAATTTGATCAAGCTTT-----TGTTTTGTTTTGTCA
TCTGAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------TTCAGCCGTACACCTGAAAA-GTCACT
TGGCGCAT------------------------------------------------------------------------
------------------GAGGGATTGACGCATGTCTGATTTTGTACGTCC------AACAT--TATATCCAGCCGCTGT
TTCTCTGAAAGTTTCACTTCAATTAGTACTCACAGACATTAGAGCATCTCCAGCCGTGCCCCAAAGAGCCCCCCTCCTCA
GGCGTTTTTTTACCGCCGGCGGGCGAAAATTGGCCCAGTCGCGCCCCCATGAGTCCGTTTTTCGCCGGGTTGGGTCGAAA
TAACAGCCGGCGCACCCGAGCCGAACCCGGCGCGCTGGGGAGCGCTGGCACAATCGAAAAGGGGCGTGGGGCCGCTCTGT
CGGCGATTTGAGAGCCTTTTCCCGCCGTTTCTTCCCGCTTTTCCCCCCGGATTCCCTCTCATTCGCTCCATTCCTCCCGC
CAATCTCCCTCCTCCTCCCCTCCCAGCCGGCCGCCATGCCGCCGAAGAAGTACGTGCTCCCCCGTGCCGCTACGGCTTCG
ACCGCCGCCGTCGCCCAGCCGAAGCAGAGGAAGCCGAGGGCGCCGCCGTCCAAGCCACCGGGCATGTCCAACGCCGACTG
GAGGGCGGAAGTTCAACGTCGGGAGGCTGTCACCACCGACCGGCAGAACAGGGCCAACGCCAAGAAGGCCCGGGATAGCG
CGGCGCTCGCGGCTGCGGCTGCGGCGGATCAAGCGGAGCGCTCGGCCGAACAACCCGAGGCGGCCCGCGTGGGGATGATG
AATCCACCCGGCGGCCACGCCCAGTACGCGCCCTGGAGCCAGCAAAGTGTCGGTTCACTGGCCGGCCTCTCATCGTCGCC
GCAACCCTGCGGATGCGCGCCTTCGCCGGGCTACGCCGACGGGGATGCACACGGTGGGTTCAACCCCAACATCACCTTCC
CCCATGGTCAGCCGGCCCAGCGCACGCCCTCGTCCGCCTTCGCCGGCGTGCAGTACCCGCCATACAACTACTCACCGCCA
ACCTACGGGTCCTCCCCGATGCCCCCTCTCCGCCGTGGCGCGCTGCCCTTCTCACAAGCATCCACGTCGCACCTCGGCGA
CACCGACGCGAGCGAAGCCGACATGGACGCCATCATCACGGCAGGCTCGGCCGCCGCCGCCGTGTCCCCCGGGTTCGCTA
CCCAGGACGAGACGGTGGACCTCGACGGCGACATGGCCGGCGAGCTCGAGTACGGCGAGGAGGAGCCGGACGAGCAGGAG
GAGGAGGAGGACGGGGAGGAGGAGGAGGAGGAGCCGGCGCCAGTTCCGGCGAGGAGACGCAAGAAGAAGAAGAAGGGGGC
GGCCAAGACCGGCGAGCCGCGCATCAAGTGGGCGTCCAAGGAGCAGGAATGTCTCGCCGAAGCGTGGAAAGTCGTCTACC
TCAACCCGATCACGGCACAAACCAGAGCATTGAGACGTATTGGGAGCGCATCAAGGCCGAGTTCGACGTGCGCAAGCTCG
TCGACCCCTACTTCAGAGGTGTGTACATGCAGCCCAGGTCGAAGGCAATGGCGAACCATTAGGGGCTCATCCAGTCGGCG
TGCAACAAATGGCATGGGATCTTCGAGGAGATCGCGGCTCGCCCGGAGAGCGGCGCTAGCATTAAGGATTAGGTATGGCA
CGCCAGTCTCCCTCTCCTTTTCATCGCGCGCACTCGCCAACTGTTTGTTCCTCGGCGCAGCTGCTGCGGATGTTCGCCAT
GTATCGCCAGGACAACAGTGACCAAGAATTTAAGTATCTCCATGTCTTCAAGCGGATCGAGAAGTGCGAGAAGTGGGCGG
ATGTCCGGCGCACCCTCGCCAAGGCCAAGAAGACATACAAGCCGGACGCGCCGATGCCGGGCGCGGGCGACGGGCTCCCT
GAAGGCAACAAAGGGGTCAAGAAGGGGAAATACGCCGACTCGGCTACCGCGCGCGTGCAGGAGTCCATCGAGCATTGCCT
CGCCGACGCACAGGCCCGGGCTGCCCTGCTTGAAGAGAAGACCGAGGCGCGGTGGTCGGCGTTGATGACGAGCAGCGCCG
TCAAGCTCGACCTACTCCGGACCAACGTCGCCGCAAAGAAGAGGACCACCGACCTGGCTTTACTGCTGGGCGGGGCGGAC
ATGCTTCAGAGCAACGACGAGCAGGTCAAGGCGTGGTACATGACGGAGCGCGGCCTCATCCTGAACCACCTGCCCTCGAC
GGCGCCGCCAACTCCCACGCCCACGCCGATGACGCCGCCAAGCCCGAGCGATGATGCCTCCACGACGCCCAGTAGCACAG
AAGCCGCGCCGACACCGCCCAACACAGAAGAAGCTCCGACACCACCAAGCCCGCACACGCCGACTCCGCCGACGCCGGAG
GCCGACCCCGCCGTGTGATGTGTTGCACGCTCGTCCTTTCTTTTTTGTACGCCGAACTATGGCGAGGTGATGATCGCCGA
ACTGGGCCGCTGTGATCACCGGACTTGTGGCGTTATTTTGTGAGCGGGAATGACTATGTTTGAATTTGCCCCGGCTTGGG
GGGGGGGGGCGGCGCCTGGGGGCGTGGCTAGGAGTTAGGTCGCTCCGAGGGGCCAATCTAGTGCCGGTTTGCCCCAGGCC
GCTCTTTTTCAGTGCCCTGGGGGCCGAACGGCTGGAGATGCTCTTAGGTGAGAGTGTGGGAGAAGTGAAGGTTGTATCTG
ACATGCTTGGGAGGAAAGCAGAGATGGCCCAAAGATCTGAAGCATTCATCGCTCTTCCAGGTGCCACGGGCTTAGCGATC
TTTCTAATCATTATATCATTATCAATCGA---TCACGTTCATAAGTTAGTAGAGCTTGCTTACAATTTTCTGTTCATCA-
-----GGGGGTACGGAACCA------------TGGAGATGATGACATGGTCCCAACTCAGAATTCACAAGAAACCTGTAA
GCAACCGAGCATAATAGATAGATTGTACTTCATGGAA-AATTTGGCACTGTTTTTACGCCAA------------------
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>chr1D_3050
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--AAAATCTGTAAGTAAGTCAACGTTGCTATTATAAATTAAGTAATTGATT-GCCAAAATCCATCTTGTGATTTTGTGCA
CAACTCCATAGTGGTCATATTTTCATACCCACATTTACATAAATATGTTTGTATACCTTCTCTAGAGGGATAATTTCATA
GTTTTCAATAACTGAAAAGACATGATCAATTATCTA-G-------------------------------------TGTTT
ATCCAATATAACGAGTGTACTTCTCTTTTTATTTCTTAGTTGGCCATCTGAAAGCTATTATCTCATTTTACGAGAATTCT
ACCAAATTACTCATTTAGTTGAAATATATCTAAATTTTATGGTATATAAGTTTTGGACCCACTATGACAGCTCGAGATCA
CATGTTGGCAGCCATGACATGCCACATCGAATAGGCCACGACTG-CCC-CACAATACAATGAAAGCTATTGTGGAGTAGC
TTAGAGCAAATGGAGAACTCTTGTGAAGCAACCTCCATGATGACTTTCCTATGCTTTGTTTGGCCAACCGCTGTATACCG
CAAATGTCCAGGAGGTGTTTGATGCTTT----------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------TTTGTGTAAGATGGGCTCATGACCATGTTGCGAGACTGGCATATATTGATC
TTAATGACCA----------------------------------------------------------------------
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----------------------------------------AACAAGTCTCTCCTAATTTTCTCTTGATTTTAAAAGTAAT
AAATATTTTTCCTTAATTAAAT----------------------------------------------------------
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------------------------AACATTTTTGGCATTTACTTAAAGTATTTTTAAAGATGGCTTAAATACTTTTAAAT
TATTTATCATTTTTTGATGGAGATAGTGGTCTTATATATATTATACCTCATTAATAATTTTTAATGAACTATTGTTTTCT
AAAAATAAATACTTTTAGTTCAAGCCTCTAATTTAGGGTTTTGGATAATAAAATGAGTTTAGACTCTTTTACGCCAAAAT
AATTCATAATCAAAATATCGTTATGTCCTTGACATATGGCATGACCATTGGGCGTAAATTGGGGTAGGGGATTGGAAGGG
ATTGAATGTGGTACTGTGAGTATCA-------------------------------------------------------
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-------------------------------TGCCCTTCAGCT-------------------------------------
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-------------------------------------------------------------------
>SNPs
--------------S--------------------S--------------------------------------------
--------------------S-S---------------------------S-----------------------------
------------------------------S--------SSSSSSSS-----S-----------S---------------
-----------------SSS-----S------------------------------------------------------
------------------SSSS----------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S----S---------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S--------------------------S-----S--------
--------------------------------------------------------------------------------
----------------------S------------------------------------S----------S-------SS
SSSSSSS-------------------------------SSSSS----S------------S-------------------
-----------------------------------------------------------------S--------------
---------------------------------------------------------S----------------------
-S--SS------------------------------------------S-------------------------------
----------------S---------------------------------------------------------------
------------------------------------------------S-------S-----------------------
-----------------------------------------------------------------------------S--
------------------------------------------------------------------S------S------
---S-------S----S-----------------------------------S-------------------------S-
--------------------S----SSSSS-----S-S----------------------SSSSS---------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------S-------
------S--S-----------------------------------------------S----------------------
-------S----------S-SS-------S---------------------------------------------S----
-------------S--------S------S--------------------------------------------------
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------------------------------------------------------S-------------------------
------------------------------------------------------------------S-------------
---------------------------------S----S-----------------------------------------
---------------------------------------------------------------------S-----S----
-----S------------------------S----------------S--------------------------------
--------------------------------------------------------------------------------
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-------------------S----------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------S----------S------------------------------------
-----------S--------------------------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------S------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S---S--S-------------------------
--------S-----------------------------------------------------------------------
-----------------------------S--------------------------------------------------
-----------S--------------S----------------------------------------S---S--------
---S--------------------------------------------------S-------------------------
---------------S-----------------------S----------------------------------------
S-----S-------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
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--------------------------------------------------------S--------------------S--
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--------------------------------------------------------S--------S--------------
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>forward_552
--------------------------------------------------------------------------------
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----------------------------------------------------ACGATTCAGGCCTCCTTTGG--------
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>reverse_1667
--------------------------------------------------------------------------------
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------------------------------------------------------------------CCTGCTCGCATGTT
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--------------------------------------------------------------ACCGTGCGTCTTCTTGTC
AG------------------------------------------------------------------------------
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>reverse_5350
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------------------------------------------------------------------CCTGAAAGTTCACT
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--------------------------------------------------------GTGTTGTAGTGTCCGGGAGA----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------
