>input_sequence_42619
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-ATGTACGCCTCTCACACTCGCAGGCTTCTTCGCCGCGACAGGGGAGCCCGTGCCCATGGCGGCGCCGCCAGGAGACGCG
CGTCGACGTCTCTGTTGTGCTTCATCGGCGCCATTATCCTCGTCGCGATCTCTCGCCACACCCTGCTCCCCAAGGTATTG
ATATTATCTCAGAAGCTTAATGCCTGAATAATCCCATTCCCAACTGGTAAC--------------------AGTCAACGG
GGCCAACGGTTC---TTTTTCTGTATGCCTCGATTGGCTCGGCTGTTGCTGTTGATCCTTCCCTAC-----CA-------
GTAGCATTGCAGATCCAGCTGCCGAAGAACTGTGCTGCAATGATTTAT---ATCATTAGCTAATTCATTGTCTTGTTTTC
GTTCTTACGAGAGAAGGTGCCATTTCTGGGTTCCTTTTGGAGAGATTTATTGGCACCCGATGCTTATATTGCCACACCCA
AATTTCATGGTGTGAAGTATGAGCTGCACACGCTCCCTGTAAGGCC-TCCCTGTCTTGGTGTCTCCTTTTGCATTGGCCA
CGAAGGTATATCACTCAGAGATTTGCATGCTAGCCTCTTAGGTGGATGCGAAGGCTGTGGCCGACGGTGACACAATCACG
GTGTATGTTGACGCGGCTGACCCTCGTGAGTCCGGCAATGTGCCCCGTGAAGTTTGGGAAGCTGTGTCAGAGCGAACCAA
GGCGCGGGCGGCCAAGAACTATGAGAAGGCTGACACGCTGCAGAATATCATAGTGGATGCCGGATATAGGTAACTTCAAA
A-TTAACATCAGGCAACTGCCTATTTCTGTGCGGTCTCACCTACTGAACG--------TTCTGAAACTTCTTCTAAGTGC
AGGCAAGTTCCTGACTTGACAGGGGAACAGGTTCTCGCGAAGAAGTACCGAATCAGGCTAAGGTTTGTC--ACATC----
----TTGGTCCCAATCCATGGTCAAGGGCTTTC----TTCTTATTGGACTGCAGTTGAGATATTATAGAACGAAACG-AT
GCAATGCAGAGGGATTGATGCACCAGAGAACTCGATGCCTTATGGTAAAGAGGCAAAAGAGGAGCTTGTGAGGCTTGTGC
AGGGAAGGACCTCAAAGATTCCCATATATGAAACTGACTGGTACGGTCGATTAGTTGGAGATGTTTACTGCAATGGGGTC
TTCGTGCAGGTAATATGTCATAT--TATTATCTCT----TTGGAGTCACC-TTTGGAGGTCTGTTATACTGAAAATAGCG
TATGCAAGTACTGG-ATCATCTATGGTACATGTGCTATCTGGCTTTCTTAAACACT----AATAGTCTTGAAATTGCACA
TTTACAGCAGAAGAAACTGAATGTGAATTACTTAAAGAAAAAAACTGAACGTGTATTCAAGATTTTGTAAGTTCTTAGAA
CTTTTACCAGAGCATAAATCGGAGCAACACGCTTAAAATAATACTATTAAACTCTGCAGGAATCATAACGTATCTCCTCA
GCTGAAGATAAATA--------CATGCTTTATGGGCTTGTTAACCACTTAGCGACTTTTCAATTAAGAAACAATCAAGTT
TTCATATCTTGCTTT---AACAGGAACACATGCTGAAGAAAGGCCTCACATGGCACTACTCTGCGTATGATCAACGGCCT
GAGCTTGCCGAGGTAAGCAGTATGACTCGCTTGACAGCTTCAATTCACATGACTGAAGAGCAGTATAACGCACTCTGAAC
ATTTCTTCAACCTACC---------ATATATACACTTGAAAAGACCTTGACAGACTAAAATTTTGTCAGTGGGAGAAGCA
GGCGCATGCGAGCGGGTTGGGTCTGTGGGCGCTGCTGAACCCTGAGAAGCCATGGGAATGGAGGAAGGAGAAGCGCACGA
GGAGATGGTGA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr3B_1_TraesCS3B01G113300
TTTGCAATAAAGTTTTCCAAAAAAAATACTATAGAAATGAGTTGTCATAATAGCCTTGTTTCATTTTTTTTCCTTTCTTT
CTTCCTCTCAGAGCTTGAAAATGCATACATACATACAGGCCTCGTGGGAGTAT-TTTTCTTTTACAAACCGCAATCTTCA
AGAC--TGGTGAAGGTCTCTTGTAATTCCACGGGTCTCGCGATGGAATTTTGATTACAAGTAATTAATCTGATTGCAAGT
AATTAGTCTGATGAGGATGAAGGCTACGATAATGAAAATGGCAATGGTCTCCTAAAAATGGCTATGGGATGTGTTCTTTT
TTCAACGGTGTATGAAGATGTCTTTTTTTTTACA------------------------AGGGTATGAAGATGTGATGTTG
ATGCCGGGCTGCGAGCCCTGCTACAGTCCGCTCTGTTCGACTGATAAGAGCATGTACAATGATGCTATCTTAGGAGTGCC
ACGTAGGATAAATGATGGGGTGGAGGAGAGAGAATTCATAAGAAAAGATTTGTCTTCTCTTATTTAAGATAAAACAAAAG
ATGACCTTTTAGCACAATTTATCTCACCATGTATTAAGAAATGACTAGTTATTGAAGATAAAATTAAGATATAATCCATT
ATAGGCATATTTTTTTGTCATCTTTAAAATTACATGCAAGACTTAAAGATAAGGTTGTCTTATCTACATGCCCTGATAAT
TCTTGCATGGCCCGGTCCTAATACGGCTTCAGAAAGCACGCAAGCCCACGCACACGACTATACGGCCCATGGGCTATGTC
A-TACGTCCCACCACCCCGGTTCG-------------GCTGCACTGAAAGAGAAAAAGCCCAGTTCGGCTCGAACGCCGC
GCCGCCGCGCCCGCACGCTGCTGGCTGACCGGTCCTTGCCCGGCGCCGGCGAGCCTCCCTTGCTGCCCCCCGCCCGGAGT
GGGCAGCCTCGGCGTCCCCCTGGCCCGGCTCCACGCGGCGCGGCGCCCGAGGGTGTTCCGCCAGTCCAAGTGCCCGGTGG
TATGTACGCCTCTCACACTCGCAGGCTTCTTCGCCGCGACAGGGGAGCCCGTGCCCATGGCGGCGCCGCCAGGAGACGCG
CGTCGACGTCTCTGTTGTGCTTCATCGGCGCCATTATCCTCGTCGCGATCTCTCGCCACACCCTGCTCCCCAAGGTATTG
ATATTATCTCAGAAGCTTAATGCCTGAATAATCCCATTCCCAACTGGTAAC--------------------AGTCAACGG
GGCCAACGGTTC---TTTTTCTGTATGCCTCGATTGGCTCGGCTGTTGCTGTTGATCCTTCCCTAC-----CA-------
GTAGCATTGCAGATCCAGCTGCCGAAGAACTGTGCTGCAATGATTTAT---ATCATTAGCTAATTCATTGTCTTGTTTTC
GTTCTTACGAGAGAAGGTGCCATTTCTGGGTTCCTTTTGGAGAGATTTATTGGCACCCGATGCTTATATTGCCACACCCA
AATTTCATGGTGTGAAGTATGAGCTGCACACGCTCCCTGTAAGGCC-TCCCTGTCTTGGTGTCTCCTTTTGCATTGGCCA
CGAAGGTATATCACTCAGAGATTTGCATGCTAGCCTCTTAGGTGGATGCGAAGGCTGTGGCCGACGGTGACACAATCACG
GTGTATGTTGACGCGGCTGACCCTCGTGAGTCCGGCAATGTGCCCCGTGAAGTTTGGGAAGCTGTGTCAGAGCGAACCAA
GGCGCGGGCGGCCAAGAACTATGAGAAGGCTGACACGCTGCAGAATATCATAGTGGATGCCGGATATAGGTAACTTCAAA
A-TTAACATCAGGCAACTGCCTATTTCTGTGCGGTCTCACCTACTGAACG--------TTCTGAAACTTCTTCTAAGTGC
AGGCAAGTTCCTGACTTGACAGGGGAACAGGTTCTCGCGAAGAAGTACCGAATCAGGCTAAGGTTTGTC--ACATC----
----TTGGTCCCAATCCATGGTCAAGGGCTTTC----TTCTTATTGGACTGCAGTTGAGATATTATAGAACGAAACG-AT
GCAATGCAGAGGGATTGATGCACCAGAGAACTCGATGCCTTATGGTAAAGAGGCAAAAGAGGAGCTTGTGAGGCTTGTGC
AGGGAAGGACCTCAAAGATTCCCATATATGAAACTGACTGGTACGGTCGATTAGTTGGAGATGTTTACTGCAATGGGGTC
TTCGTGCAGGTAATATGTCATAT--TATTATCTCT----TTGGAGTCACC-TTTGGAGGTCTGTTATACTGAAAATAGCG
TATGCAAGTACTGG-ATCATCTATGGTACATGTGCTATCTGGCTTTCTTAAACACT----AATAGTCTTGAAATTGCACA
TTTACAGCAGAAGAAACTGAATGTGAATTACTTAAAGAAAAAAACTGAACGTGTATTCAAGATTTTGTAAGTTCTTAGAA
CTTTTACCAGAGCATAAATCGGAGCAACACGCTTAAAATAATACTATTAAACTCTGCAGGAATCATAACGTATCTCCTCA
GCTGAAGATAAATA--------CATGCTTTATGGGCTTGTTAACCACTTAGCGACTTTTCAATTAAGAAACAATCAAGTT
TTCATATCTTGCTTT---AACAGGAACACATGCTGAAGAAAGGCCTCACATGGCACTACTCTGCGTATGATCAACGGCCT
GAGCTTGCCGAGGTAAGCAGTATGACTCGCTTGACAGCTTCAATTCACATGACTGAAGAGCAGTATAACGCACTCTGAAC
ATTTCTTCAACCTACC---------ATATATACACTTGAAAAGACCTTGACAGACTAAAATTTTGTCAGTGGGAGAAGCA
GGCGCATGCGAGCGGGTTGGGTCTGTGGGCGCTGCTGAACCCTGAGAAGCCATGGGAATGGAGGAAGGAGAAGCGCACGA
GGAGATGGTGAATCATCAGTGACTCGTGCCCAAAGATCTCTAGACGACTAGACCAGAACAATAGCTTCAAACACTGTATA
ATGTGTTCTCTGAACCTCAACACTTTCATGTTGTAACAACCTCTGTAGAATGAAGCAGGCAGCACCGATTGGTGTAAGCT
CCCATTAGGGACTCATTCTCTTTTCTGCATTAGACTGTTGTAAAACCTGCAATGATTTCTGTAAAACATGATCTGATGAT
CAATTGGTGGTAATGGATTGAATACTCCTAGCCAGTGGCAGACCTAGGAATTGAGGTTTGCCGGGACGAATATTTCCAGT
ATAAAAGTTTTTGAGTTACAAACAAAATTTGTACTCAAGAAACAAATGGTGGTTTGTATGCGATTGGAGCAGGTGGCTAT
GGAGGTTTTTTCCCAACATGGGAGACAACATAACCTTCGGATCGATCCACCACCTCCATCGAAATAGGCATAGTGTCGGT
CTATAGGGCTCTACTGTTGCCGATTTGTCGGGTTTTTTTCATCAATTTTTGTCAGACCTTCATATTGGGCCGTGTGCATC
TTAATTATGCAGAGGCTAGGTATTACTCATAATGCTTTGTATCCGCTTGATGCTACATTTTGAGATAATAAAATCATTCT
TTATCGAAAAAGAAACAAATGGTTAACATAAGACACAAAATTTCAAGCGAGAACAAAAAAAAAATTGTGCTATACATTGC
ACATGTGAACCCCAAAATTCCATTCTGCCTCCTCTTTGGAGTCCATCGTCGGCGCAGTGGCATAGCCAGGATTTTATGTC
AGGGTGGTCCAATTGGCACCAGAAGAATTACACCACAAATTTATCAAATCTAACATATGCACACAGAATATATCCAAAGC
ACATATCAATAAGGTCTATCAAAGCATATTAAAATTCATGTTCAAGCCTTACATTCGCTTAAAATATAAAACACCTTATT
TGTCGGATCCATATAAAAAAAGGGATGCAATGTCTCCTGTCCTCTTCATTT
>chr3A_32
-------------------------------TAGAAATGGGTCGTCATAATAGCTATGTTTTTGTTTT--------CTTT
CTTTCTCTCGGAGCTTGAGGATACATACATACATACATATGGGGCTAGTGGGACTTTTTTTTTACCAACCGCAATCTTCA
GGACGGTGGTGAAGGTCTATTGTAATTCCATGGGCCTCACGATGGAATTTTGATTACAAGTAATTAATCTA---------
----------ATGGGGATGGAGGCTATGATAATGAAAATGGCTATGGAAATGTGATTTCA--------------------
-------------------------TTTTTTACAGGGTATTTTTTAGGGGATTTTTACAGGGTATGAAGATGTGAAGTTG
ATGACGGCTGC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CACGGCCCGGTCCCAACATGGCTTTAGAACCGT-GCAAGCCCACGTACACGAATATACGGCCCATGGGTTATGTC
A-TACGTCCCACCACCCGCATCCG-------------CCTGCACTGAAAAA-AAAAAGCCCAGTTCGGCTCGAACGCCGC
GCCGCCGCACCCACACGCTGCTGGCTGACCGGTCCTTGCCCGGCGCCGGCTAGCCTCCCTTGCTGCCCCCCGCGCGGAGT
GGGCAGCCTCGGCGTCCCCCAGGCCCGGCTCCACGCGGCGCGGCGCCCGAGGGTGTTCCGCCAGTCCAAGCGCCTGGTGG
CATGTACGCCTCTCACACTCGCAGGCTTCTTCGCCGCGACAGGGGAGCCCGTGCCCATGGCGGCGCCGCCAGGAGGCGCG
CGTCGAAGCCTCTGTTGTGCTTCGTCGGCGCCATCCTCCTCGTCGCGGCCTCTCGCCACACCCTGCTCCCCAAGGTATTG
ATATAATCTCAGAAGCTGAATGCCTGAATCCCATCCC-------------------------------------CAGCGG
CGCCAAAGATTATTTTTTTTCTGTATGCCTCGATTGGCT-----------GTTGATCCTTCCCTAGGGTATCA-------
GTAGCATTGCAGATCCAGTTGCCGAAGAACTGTGCTGCAT----TGACTGAATCATTAGCTAATTCCATGTCTTGATTTC
CTTCTTGCGAGGGAAGGTGCCATTTCTGGGCTCCTTTTGGAGAGTTTCATTGGCATCTGGTGCTTACATTCCCATGCCCA
AATTTTACGGTGTAAAGTATGAGCTGCACACGCTCCCTGTAAGGCC-TCCCTGTCTTGGTGTCTCCTTCTGCATTGGCCC
CGAAGGCATATTGCTCACAGATTTGTGTGGTAGCTTCTTAGGTGGATGCGAAGGCGGTGGCCGACGGTGACACAATCACA
GTGTATGTTGACGCGGCTGACCCTCGTGAGTCCGCCAACGTGCCCCGTGAAGTTCAGCAAGCCGCCGCAGAGCGAACCAA
GGCGCGGACGGCCAAGAACTATGAGAAGGCTGATATGCTACATAAGATCATAGTGGATGCCGGATATAGGTAACTTCAAA
AATTAACATCAGGCAACTGTCTATTTCTGTGCGGTCTCACCTGCTGACAGTTCTGAAG--------CTTCTTCTAAGTGC
AGGCAAGTTCCTGACTTGACAGGGAAACATGTTCTCGCGAAGAAGTACCGGATCAGGCTAAGGTTTGTCCCACATC----
----TTGGTCCCAATCGATGGTCAAGGGCTTTGTTTGTTCTTATTGGACTGGAGTTGAGATATTATAGAACGAAACG-AT
GCAATGCAGAGGGATTGATGCACCAGAGAACTCGATGCCTTATGGTAAAGAGGCAAAAGAGGAGCTGGTGAGGCTGGTGA
AGGGAAGAACCTTAAAGGTTTCCATATGTGATACTGACCGGTACGGTCGATTAGTTGGAGATGTTGTCTGCAATGGTGTC
TTCGTGCAGGTAATATGTCATACTCTATTGTCACG----TCAGAGTCACCTTTTCGAGGTCTGTTATGCTGGAAATAACC
TATGCAAGTACTG-AATTATGTATGCTCCATGTGCTGTTTGGTTTTCTTATTAAAAGATCAATAATCATGAAACTGCACA
TTTACAGTACATGAAACTGTATGT------------------------------ATTTAAGATTTTGAAAATTCTCAGAA
CTTTCACCAGAACATAAATCGAATCAACAAGCCTCAAATATTACTATTAAATTCTGCACGAAACATGATGTATTTCCTCG
TATGAAGATACATGCATACATGCATAC-TTATGGGCCTGTTAACCATTTTGCGACTTTTCAACTAAGAAACAATCAAGTT
TTCATATCTTGCTTTTAAAACAGGAACACATGCTGAAGAAAGGCCTCACATGGCACTACTCTGCGTATGATCGACGGCCT
GAGCTCGCAGAGGTAAGCAATGTGACTTGCTTGGCAGCTTCGGTTCACATGACTGAAGAGCAGTATAGCGCACTCTGAGC
ATTTCTTCAACCTACCAACTACCATATATATACACTTGAAAAGACCTTGACAGACTGAAATTTGTTCAGTGGGAGAAGCA
GGCGTGGGTGAGCGGGTTGGGCCTGTGGGCGCTGCCGAACCCTGAGAAGCCATGGGAATGGAGGAAGGAGAAGCGCGCGA
GGAAATGGTGAATCATCCGTGACTCGTGCCCAAAGATCTCTAGACGACTAGACGAGAACAGTAGCTTCGGACACTGTATA
ATGTTTACTCTGTACCTCAACACTTGCATGCTGTAACAGCCTCTGTAGATTGCAGCAGGGAGCATCGATTTGTGTAAGCT
CCAATTGGGGACGCATTCTCTTGTTTGCATTAGACTGTTGTAAACTTAT-AATGATTTCTGTAAACCACGATGTGATGAT
CAGTTGGTATTAATGGATTGATACTGCTA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr3D_702
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GGCCCGGTCCCAATATGGCTTTAGAAAGCGCGCAAGCCAACGTACACGACTATACGGCCCATGGGCTATGTC
AGTACGTCCCACCACCCGCATCCGACACGCCAGTTCGGCTGCACTG--AAA-AAAGAGCCCAGTTCCGCTCGAACGCGGC
GCCGCCGCACTCGCACGCTGCTGAGCT-----------CCCGGCGCCGGCGAGCCTCTCTTGCTGCCCCCCGCGCGGAGT
GGGCGGCCTCGGCGTGCCGCAGGCCCGGCTCCACGCGGCGTGGCGCCCGAGGGTGTTCCGCCAGTCCAAGTGCCCGGTGG
TATGTACGCCTCTCACACTCGCAGGCTTCTTCGCCGCGACAGGGGAGCCCGTGCCCATGGCGGCGCCGCCAGGAGGCGCG
CGTCGACGCCTCTGTTGTGCCTCATCGGCGCCATTCTCCTCGTCGCGATCTCTCGCCACACCCTGCTCCCCAAGGT----
-----ATCTCAGAAGCTGAATGCCTGAATAATCCCATTCCCAACTGGTACTAGCCACTAGTGCGTGCAGGAAATCAGCGG
CGCCAATGATTTTTTTCTGTAA-TATGCCTCGATTGGCT-----------GTTGATCCTTCCCTAGGGTATCAATATTCA
GTAGCATTGCAGATCCAGGCGCCGAAGAACTGTGCTGCATTGGCTGACCGAACCATTCCCTAATTCCATGTCTTGATTTC
ATTCTTGCGAGAGAAGATGCCATTCCTGGGCTCCTTTTGGAGAGTTTCATTGGCACCTGGTGGTTACATTCCCACGCCCA
AATCTCACGGTGTGAAGTATGAGCTGCACACGCTCCCTGTAAGGCCCTCCCTGTTTTGGTGTCTCCT---GCATTGGCCA
CGAATGTATTATCACTCACAATTTGTATGGTAGTTTCTTAGGTGGATGCAAAGGCTGTGGCTGACGGTGACACGATCACA
GTGTATGTTGACACGGCTGACCCTCGTGAGTCCGGCAACGTGCCCTGTGAAGTTCAGGAAGCCGCTGCAGAGCGAACCAA
GGCGCGGGCGGCCAAGAACTATGAGAAGGCTGACACGCTGCAGAAGATTATAGTGGATGCTGGATATAGGTAACTTCACA
TTAGG--ATAAAGCAACAATCTCTTTGTGTGTGGTGTCGGCTACTGAAAGTCTGAAACTTCTGAAACATCTTCTGAATGC
AGGCAAGTTCCTGGCTTGACAGGGGAACAGGTTCTCGCGAAGAAGTACCGGGTCAGGCTAAGGTATGTCCCATATTTTGG
TTGGTTGGTCCCAATTGATGATTAAGGACTTTGTT----CTTGTTGGACCGCAGTTAAGATTTTATGGATTGAAATGAAT
GTAATACAGAGGGATTGATGCACCGGAGAACTCGATGCCTTATGGTAGAGAGGCGAAAGAGGAGCTAGTGAAGCTGGTGC
AGGGAAGAACGTTAAAGATTTCCATATATGATACTGACCGGTATGGTCGATTAGTTGGAGATGTTGACTGCAATGGTGTG
TTCGTGCAGGTAATATGTCATACTCTCTTATCATGCACATCAGAGTCACCTTTTGGAGGTCTGTTATGCTGGAAATAATC
TATGCGAGTACCAAAATTACATTTGCTCCATGTGCTGTTTGTCTTTC---TTAAAAGATCAGTAATCATGAAATTGCACA
TTTACAGTACATGAAACTGAATGT------------------------------ATTAAAGACTTTGAAAACCCTTACAA
CTTTTACCGGAACATAAATCAGAGCAACAAGCTTAAAATAGTACTATTAAATTCTGCAACAAACATGTTGTATTTCCTCG
TTTGAAGATACGTA--------CATAC-TTATGGGATTGTTAACCGCTTTGCGAACTTTTGACTAAGAAACAAATAAGTT
CTC--ATCTTGCTTTTGAAACAGGAACACATGCTAAAGAAAGGTCTCACATGGCACTACACTGCCTACGATCAACGTCCA
GAGCTTGCCGAGGTAAGCAGTGTCACAACTAACAGCCTCAGT-TTTACTTGACTGAAGGGCAGTATAGCGCACTCTGAAC
AATTGTTCAACCTACC-----------ATATGCACTTGAAAAGACCTTTACAGACTGAAACTTGTTCAGTGGGAGAAGCA
GGCACAAGCGGGCGGGTTGGGCCTGTGGGCGCTGCCTAACCCCGAGAAGCCATGGGAATGGAGGAAGGAGAAGCGCACGA
GGAAATGGTGAATCGTCCGTGAC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S--S-----------SS-----SSS----SSSSSSSS----
---S-----S--------SS--S--------------SSSSSS-SSS-S-SSS-----S------S--------------
S-----------------S-----------S---S---S-------------------------------SSSSSSSSSS
SSSSSSSSSS---S-----S------S---------------S----SSSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------------S----
---S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS--S----------S----S-----S-------S------------S-----------------------------
-----------------SSS-S---------------------------S-S----------------------------
--------S----------------------------------------------------------------S------
--------------------S-----------------------------------------------------------
---------------------------------------------------------------------------S----
--------S--------------------------S--------------------------------------------
----S------------S-------------------------------SS---------------------S---S---
S-----S-S--S---------------------------SSSSSSSSSSS---------------S--------------
------------------S--------------------S--SS-S-S------------------SS-------S----
S-----S-----------------------S-------------S--S---------S-S------S---S----S----
-------S------------------------------------------------------------S-----------
-----------SS----S-------S---S----S--------------------------------------------S
--------------------------------------S---------------SS------S-SSS-------------
---------------------------------------------S----------------------------------
-------------------S----------------------------S-------------------------------
--------------------------------------------------S-----------------------------
----------------S---------------S-----------------------------------------------
------------------------------------------------------------------S--------S----
-------S----S-------S----------S------S--------------------------S----------S---
----------------------S---------S-S-----SS-------------------------S---S-----S-S
-------------S---S--S----S-S--------S-S-----------SSS-SS--------S--S------------
-------S-S-S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---------S--S---------
-----------S-----------------S----------S----------S------S---S---S-S----S-----S
SS--------S--------------S-S---------------------S------------S-----------------
--------------------------------------------------------------------------------
---------------------S-----S-------------SS------------------------S------------
--------------------------------------------------------S------SS---------------
------S--------------S-------------S--------------------------------------------
---S-------------S-----------------------------------S------S-------SS----------
----S-S-----S------------S----S-------S----------S--S------S----S-----S---------
--S---S-----S---------S-S-------------------SSSSSS---------------S--S---S-------
--S-----SS-----------SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_512
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TGATGGGGTGGAGGAGAGAG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_1743
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TGTGTCAGAGCGAACCAA
GG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>forward_750
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CCCGGTCCTAATACGGCTTC--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_2226
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TACTGCAATGGGGTC
TTCGT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>forward_2173
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CTTGTGC
AGGGAAGGACCTC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_3349
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GCAGGTGGCTAT
GGAGGTTT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
