>input_sequence_42607
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------------------ATGGCGGCCGCCGGCTCGGAGGCTGAGCGGAGCGGCGAGAAGCCGCCGGCGAATGCGCCCGC
CTTGGAGGCCGCCAGGACGATGTCGCCGGAGCGCGGCATCCAGTCGCCCGTGAACGGAGGCCCAGGGAAGGAGCCGTCGG
GGGAGGCCAAGGTCGTCGAAGAGCGGCGGGAGGATGGGGTCCAAGCGGCCGACGCGGAGCGCAGCGACGAATCGACCAAG
GCGGACGAGGGGGCCTTCGTCGACTCGACCAAGGCGGAGAACATCAAGAAGCTGCAGTCGGAGGCGCCCACCGACGACCC
GGACGCCGAGCCTGCAGATGTCAAGAGCAACGGCAAGAACGTCGACGCGGCCACGAGCGCCGCCAAGGAGGACGGGAACC
CGGTGGAGGAGGACCCCACCAACGTCCCGGAGGCGGAGGACCCGAGCAGTACCAATCCAGCTGGTACGGCCTGTCTTGTT
CCCCACTCGTTATGCTCTAGTTCTTGCCAATCGATAGCTCGGATTTAGGATGTTATGAGATTGGATTTCCCCAAATCGCA
TTTCACATTTTGATAGCATGTCAGCCCTACATAATAGTAATATCTAGGGTTTAAGACGCAATGGGGGGAAATCCACCCAG
CCTTTAGTTGCAGTGGGGAAAGCCAAGAACACCATTAGTTAGTTGTTGTGGGTGTTGTGGGTTGCTTTGCTGAGCGCAGG
TGCTTAGGAGGAGGGACGGTTCTGTCATGTTCCCCACTCAATGTACTCGTTCTTGCCAGTCTAGCTCGGATTCAGTATCT
CAACTCAATCCGATTGGATTTCCCTAAATCAGATATCAATCTTGATAGCTCGATTCAAGAATTTGGGGAAATGGGAGCTT
GAATTGAGGATGTAATCTTGTAGTACACAATATATACGGTATAAGATTTCCTTTAGGAAAATATAATAAAGAACACCTTC
AGTTGTTGTGGGTTGGATGGTAATTGAAGTAATTTATTAGCTGATTAAATTAACGATGAGGAGTTCGGGACTCGTCGATT
TTTTGGTTCCAATAATAACTCTGCTAATGTGCCTATTATTTTAGCCTCTGAGGTTTTCCATGGCCGTTAACTGCTCTGTC
AAAAAAATATAAAATCAACTCAATAGCATGTTAAGAGTACGGAATTCATCAAGTAAGGTTTTTGCTTCTGTTCAGGTACC
TCAAGGTCTTGGTCAAGCACGGTATTCAAGGCTGGGAAAGCCATCGAGGAATCTAGTCGCTATGTTGGTAGCTGGCACGC
GCCGCTGCAACACAGCAGCGATTTCCTGCGACAGGTTGCGCGCTACGCCCCAGCCACAGGACTCCAGCAGGGTTGTCCTG
CTGCATTCATCTGGCTGTCTTGGGCCTGCGACAAGGTCAGTGCTTTCCTCGCCGAGGTGGCAACAACCGTGCAGGGTGCA
TCGGCCCTTGGGCGAATGGTAGGCCGCTGCACGAGTATGATCGGCAACAACCTTAAGGCGGAGCCGGGGGAAGAACCAGA
GCCAGGCAAGAAAGATGGCACCGCTGCCAAGGTGCTAATCACATCATGTGACCAGGTAACTTGCAGCGCAGTTCGTAGTT
GGGTAACTTGCAGCTGATCGGTCTGAGATACTGATGTCATCATACTGACCGTAAGCTGCATTTCTTGATGTTTGAAGCTT
GAGGAAGTATTGAGGTTCTGGGAGGCAGGAGCGAGGGTCCAGCTGGATATAGGCCCGGACGTGAGCGCCGCGCTGGCCAA
TCTCTTGTATGACATGCTCAAACAGCGAGGGCCTGCTGCCCTTGATCTTATCAAGAATGGCTCCAACATGGCGGCAAAGC
GCTCAGGGGCATAG------------------------------------------------------------------
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---------------------------------------------------
>chr6D_1_TraesCS6D01G039500
ATGACACCACTAGAGAAACAACAACATAACACATCA-TCATAACATTGAACAAAAACCA---ACTTCACATGATTACTTA
TAACAAGACATCTCCCATGTCCTCAAGAACTAA----TGGGACTACTCACAAAGCATGTTTATGTTCATGATCAGAGAAG
AATAAT-ATATGATTAACAATCTGAACATATAATGTTTCACCAAATAAACCAACTAGCATCAACTACATGATGTAATCAA
CACTACTAGCAA-ACCACAAGTACCAATCTGAGGTTTTGAGACAAAAGATTGAATACAAGAGATGAACAAGGGTTTGGAG
ATGAGATGATGCTGGTGAAGGTGTTGATGGAGATGACTCCTCCCATGATGAGAGGAGCGTTGGTGATAATGATGGC-TTT
GATTT-CCTCCTCCCGGAGGAAAGTATCCCCGTTGGAATCACTCCGTCGGAGTGCAAAAGTGCTCATGCTCAGGTTCCGC
CTTGAGTTGGCATCGCTTCGTCCCGAAAGTT-TTCTCAT--TAT-TTTCTA---GG-GTAATGACTTCATATAGAGGAAG
ATGGGCATCGG-TGGACCTCT--------------------GTGGGCCCCACAAGGCACCTAGGCGTGCCCACC------
----------GAGGGTCTTCTTCGGTACTTCTTTCTTCCGGTATGTTTTTTTTATATATTTGAAAATAATGCTCCGTAAA
TTTTTCAAGTCGCTTGGAGCTATGGAGAATAGCTATCTCTGTTGTGGCCA-TTTCAGGCTCAGAATTCTAGTTGCCGGCA
ATCTCCCTCTTCAAATGTATCTTGCATTTTAAGATAGAAAATACATTAGAATTACATCATAAAATAAAATATAAATCTAA
AACATTGTAAAATATTAGTAGGAAAACATGATGTAAAATAGGCGTATCAAGCATGTCAGTCCTTGAAATAGGAACCCGGG
CGGGCAGGCGACACGTCTCCCTTCCCGATCGGAACAAACAACCAGCCGGTCGAACCGAACCGAACCGAACCCAACCCAAC
CCAACCAAGAGGAAGCTCATGGCGGCCGCCGGCTCGGAGGCTGAGCGGAGCGGCGAGAAGCCGCCGGCGAATGCGCCCGC
CTTGGAGGCCGCCAGGACGATGTCGCCGGAGCGCGGCATCCAGTCGCCCGTGAACGGAGGCCCAGGGAAGGAGCCGTCGG
GGGAGGCCAAGGTCGTCGAAGAGCGGCGGGAGGATGGGGTCCAAGCGGCCGACGCGGAGCGCAGCGACGAATCGACCAAG
GCGGACGAGGGGGCCTTCGTCGACTCGACCAAGGCGGAGAACATCAAGAAGCTGCAGTCGGAGGCGCCCACCGACGACCC
GGACGCCGAGCCTGCAGATGTCAAGAGCAACGGCAAGAACGTCGACGCGGCCACGAGCGCCGCCAAGGAGGACGGGAACC
CGGTGGAGGAGGACCCCACCAACGTCCCGGAGGCGGAGGACCCGAGCAGTACCAATCCAGCTGGTACGGCCTGTCTTGTT
CCCCACTCGTTATGCTCTAGTTCTTGCCAATCGATAGCTCGGATTTAGGATGTTATGAGATTGGATTTCCCCAAATCGCA
TTTCACATTTTGATAGCATGTCAGCCCTACATAATAGTAATATCTAGGGTTTAAGACGCAATGGGGGGAAATCCACCCAG
CCTTTAGTTGCAGTGGGGAAAGCCAAGAACACCATTAGTTAGTTGTTGTGGGTGTTGTGGGTTGCTTTGCTGAGCGCAGG
TGCTTAGGAGGAGGGACGGTTCTGTCATGTTCCCCACTCAATGTACTCGTTCTTGCCAGTCTAGCTCGGATTCAGTATCT
CAACTCAATCCGATTGGATTTCCCTAAATCAGATATCAATCTTGATAGCTCGATTCAAGAATTTGGGGAAATGGGAGCTT
GAATTGAGGATGTAATCTTGTAGTACACAATATATACGGTATAAGATTTCCTTTAGGAAAATATAATAAAGAACACCTTC
AGTTGTTGTGGGTTGGATGGTAATTGAAGTAATTTATTAGCTGATTAAATTAACGATGAGGAGTTCGGGACTCGTCGATT
TTTTGGTTCCAATAATAACTCTGCTAATGTGCCTATTATTTTAGCCTCTGAGGTTTTCCATGGCCGTTAACTGCTCTGTC
AAAAAAATATAAAATCAACTCAATAGCATGTTAAGAGTACGGAATTCATCAAGTAAGGTTTTTGCTTCTGTTCAGGTACC
TCAAGGTCTTGGTCAAGCACGGTATTCAAGGCTGGGAAAGCCATCGAGGAATCTAGTCGCTATGTTGGTAGCTGGCACGC
GCCGCTGCAACACAGCAGCGATTTCCTGCGACAGGTTGCGCGCTACGCCCCAGCCACAGGACTCCAGCAGGGTTGTCCTG
CTGCATTCATCTGGCTGTCTTGGGCCTGCGACAAGGTCAGTGCTTTCCTCGCCGAGGTGGCAACAACCGTGCAGGGTGCA
TCGGCCCTTGGGCGAATGGTAGGCCGCTGCACGAGTATGATCGGCAACAACCTTAAGGCGGAGCCGGGGGAAGAACCAGA
GCCAGGCAAGAAAGATGGCACCGCTGCCAAGGTGCTAATCACATCATGTGACCAGGTAACTTGCAGCGCAGTTCGTAGTT
GGGTAACTTGCAGCTGATCGGTCTGAGATACTGATGTCATCATACTGACCGTAAGCTGCATTTCTTGATGTTTGAAGCTT
GAGGAAGTATTGAGGTTCTGGGAGGCAGGAGCGAGGGTCCAGCTGGATATAGGCCCGGACGTGAGCGCCGCGCTGGCCAA
TCTCTTGTATGACATGCTCAAACAGCGAGGGCCTGCTGCCCTTGATCTTATCAAGAATGGCTCCAACATGGCGGCAAAGC
GCTCAGGGGCATAGGGATCAACATTTTCTTGCTGTTAAACATGCATACAGATGTATACTATTCTTGGGGTGATACTTCCT
CCTTCCCATAATATAAGATCGTTTTGCAAGCTGTTTTAGCTCGCAAAACGATCTCATATTATGGGATGGATGGAGATACA
ATGTAATCTGATGGCATTCCAGTTAGTGGATGCACAGCCTGGCAAACCTAGGAGCCAATGCTAGTGATATACCACTGCCT
TTACTAACGTGTGGAGTTGGCTGTGGTGATCAAAAACTGTGAGATATGTGTGTAGTTGTTGGTTCTTCAGAAATTTTGTG
CAAGCAAAAT-ATTATCAGGTCTTAATTCTGGATGTATAAACTTGCCTGCAGCAAAAGATTTTTT---------------
-------------------------------------------------GGTTATATAAGCTTGTTAGTCAAAACCACCT
GATCCTTGTT----------------CGGTTCTTTGCTTCCTTGAGTTTTTGTGTAC------CCTGGAGTTGGTTCTTC
CCCAAGGAAGAATTTCTTCTCGGACAAAATGCGTGTTTGGAATACAACAAATCTTATTTTTTTCTCAACAATTCGTCCGC
AAACACAACAATAAATTTCACAACTGATGTATATTAACACGTTTCAATCACTCACACACACTTGGCAAATTTGTCCCCAA
ATTGGCAATTCAAACACTTGAAAAGGTGTACAAAAGAACAACATTAAATCCGCTACTTGTACAGCACAGGGACA------
---CAATACAAACGTTATCGTGCTATAAACGAACCAAC----TGCACCTACATCATCATATAGAGCAACTCATCTAACAA
CATCCACCCGCTCGATGACCGAAATTAGGCCTGTGCGGGTT---------------------------------------
--------------------------------------------------------------------------------
------------------TTTGGAGCTCCACCAGCCTGTCAAGAAGCCCATTCGCCCTAAGTCACCGAAACGATTCTGCA
AGAACTTCACCGGTCCAGCAAGGAATCGCTCCCCCTAGGCACACCAATTAATTCTGCCCCTAGCCTCAAGCAGGTGGTCG
ATGGCTTCGCCCCTGTTGATCTGTTGCTGCCTTAAGAGAGAAGAAGCTTTG
>chr3D_1
ATGACACCACTAGAGGAAGAATAACATA-CATATCA-TCAAAATATTGAACGAATACCA---ACTTCACATGATTACTTA
TAAAAATACTTCTCCCATGTGCTCAAGAACAAAC----AGAACTACTCACAAATCATGTTCATGTTCAAGATCATAGGAG
TATAAT-ATATGATTAAGTATCTAAACATGCGATCTTCCACCAAATAAACCAACTAGCATCAACTACAAGATGTAATCAA
CACTACTAGCAA-CCCACACGTACCAATCTGAGGTTTTGGGAC-AAAGATTGAATACAAGAGATGAACTAGGGTTTG-AG
ATGAGATGTTGCTGGTGAAGATGTTGATGGAGATGAGTCCTCCCACGATGATAGGATCGTTGGTGATGACGATGGTTT-C
GATTT-CCCACTCCCGGAGGGAAGTATCCCTGGTGGAATCGCTTCATCGGAGAGCAAAAGTGCTCCTGCCCAGGTTCCAC
CTCGAGATGGCGACGCTTCATGCCAAAAGTG-TTCTTCT--ATT-TTTTTCTAGAT-AAAATGGCATGATATAGCAGAAG
GAGGGCACTGG-AGGGCCTCT--------------------GTGAGCACCA-----------------------------
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---------------------------------------------------
>chr4D_3
--GACACCACTACAGGAAGAACAACATAGCACATCA-TCAAAATATTGAACAAAAACTA---ACTTCACATGATTACTTA
TAATAAGACTTCTCCCATGTCCTCAAGAACAAA----TGAAACTACTCACAAATAATATTGATGTTCATGATCAGAGGAG
AATAAT-ATATGATTAACAATCTGAACATATGATCTTCCACCAAATAAACCAACTAGCATCAACTACAAGATGTAATCAA
CACTATTAGCGA-ACCCCAGGTACCAATCTGAGGTTTTGGG-C-AAAGATTGAATACAAGAGATGAACTAGGGTTTAGAT
ATGAGATGGTGCTGGTGAAGATGTTGATGGAGATGAGTCCTCCCACGATGAGAGGAACGTTGGTGGTGACGATGGC-T-C
GATTT-CCCCCTCCCGGAGGGAAGTATCCTTGGCAGAATCGCTCCACCGGAGAGCAAAAGTGCTCCTGCCCAGGTTTCAC
CTCAAGACGGCGGAGCTTCGTCCCGAAAGTC-TTCCTCTTATTTATTTTTCTATGG-CAATTGGCTTCATATAGGAGAAG
ATGAGCCTCGG-AGG-CTTGCTGGTGGTCGCACAAGCTCAAGTGACGCACCCTAGGCTCGCTGGTGGGCCCCCT------
----------CAGGGATCCT-----------TTTCTTCCAGTAT--TTTTTATATATTCCAAAAATAAATCTCCCATAAA
AGTTTAGGT-CATCTGGAGCTCCGGAGAATAGCTATCTCTGTTGTAGCTCTTTTCAGGTCCAGAATTCCATCTGCCGGCA
ATCTCCCTCTTGTGATAGAACTTGCAATTTAAGAGAGAAAGCGCATTAGAATAGCACTTAAAAGTGAAATATAACTTAAA
ATAT-----AAATAACAATAGAAAAACATGATGCAAAATGGATGTATCA-------------------------------
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---------------------------------------------------
>chr4D_3
--GACACTACTAGAGGAAGAACAACATAACACATCA-TTATAACATTGAACGAATACCA---AGTTCACATGATTACTTA
TAACAAGACCTCTCCCATGTCCTAAAAAATAAA----TGAAACTACTCATAAAGCATGTTTATGTTCATGATCAGAGGAG
ATAAAT-ATGTAAATGACAATCAGAATAGATGATCTTCCACCAAGTAAACTAACTAGCATCAGCTACAAGATGTAATAAA
CATTACCAGCAC-CCT-TATGTACCAATCTGGGGTTT-GATAC-AAAGATTGAAAGCAAGGGAAGAACTAGGGTTTGGAG
ATGAGATGGTGCTAGTGAAGATGTTGATGGAGATGAGTCCTCCCATGATGAGAG-AGTGTTGGTGATGATGACGAC-TTT
GATTT-CCCCCTCCCGGAGGGAAATTTCCTTGACGAAATCGCTTTGCTGGAGAGCGAAAGTGCTCCTGCCCAGGTTCCGC
CTCGAGACGGCAGCGCTTCATCCCGAAAGTC-TTCTCTT--ATT-TTTTTCTAGGG-AAAATGGTTTCATATAGAGGAAG
ATGGGCATCGG-TGGACCTCT--------------------ATGGGCCCCACAAGGCACCTGGGCGTGCCCCCTACCTTA
TGAGCCCAAAGAGGCTCTTCTTCGGCATGTCTTTCTTCCAGTAT--TTTTTTTATATATTCCGAAATAGTTCTCCATAAA
TTTTCAGGC-CATTTGGAGCTCCAGAGAATAGTTATCTCTGTTGTG----------------------------------
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---------------------------------------------------
>chr5D_3
--GACACCACTAGAGGAAAAACAACATAACACAACG-TCAAAACATTGAACGAAAACCA---AGTTCACATGGTTACTTA
TAACAAGACTCCTCCCATGTCCTCAAGAACGAAC----AAAACTACTCACAAATCATATTCATGTTCATGATCAAAGGAG
AAAAAT-ATATGATTAACAATCTGAACATATAATCTTC-ACGAAGTAAACCAACTAGCATCAACTACAAGATGTAATCAA
CACTACTAGCAATCCCACATGTACCAATATGAGGTTT-TAGAC-AAAGGTTGAATACAAGAGATGAACAAGGGTTTGGAG
ATGAGATGGTGTCGGTGAAGATGTTGACGGAGATGAGTCTTCCCACGATGAGAGGAATGTTCTTGATGATGATGGC-TTT
GATTT-CCCCCTCCCGGAGGGAAGTATCCCTAGCGGAATCGCTCCATCGAAGAGCAAAAGCGCTCCTGCCCAGGTTCCGC
CTTGAGACGGCGGCACTTCATCCCAAAAGTC-TTTCTCCTATTT-TTTCTA---GG-CAAATGGCTTCATATAGTAGAAG
ATGGGCATCGG-TGGACCTCT--------------------ATTGGCCCCACAAGGCACCTGGGCGTG------------
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---------------------------------------------------
>chr2D_3
--GACACCACTAGAGGCAGAACAACATAACATATCA-TCAAAAGATTGAATGAAAACCA---ACTGCACATGATTACTAA
TAACAAGACTTCCCCCATGTCCTCAAGAACAAACTAATAGAACTACTCAGAAAGCATAATTGTGTTCATGATCAGAGGAA
AGAAAT-ATGTGATTAACAATCTAAACATA----CTTCCACCAAGTAAACCAAATAGTATCAACTACTAGATGTAATCAA
CACTACTAG-GA-CCCCCATGTACCAATCTGAGGTTT-GATAT-AAAGATTGAATATAAGAGATGAACTAGGGTTTAGAG
ATGAGATGGTGCTGGTGAAGATGTTGACGGACATGAGTCCTCCCATGATGAGAGGAGCGTTGGTGATGACGATGGC-TTC
TATTT-CCCCTTCGCAAAGGGAAGTATCCCCGGCAGTATCGCTTCACCGAAGAGAAAAAGTGCTCCACCTCTAGTTCCAC
CTCGAGACGGTGGCGGCTGGTCCCGAAAATC-TTCTCTC--TAT-TTTTTTCTAGGCTAAACGGCTTCATATAGGAGAAG
GTGGGTATCAGGAAG-CCTCG--------------------GTGGAGCCCACAAGTCACCGGGGCGCGCCCCACT-----
----------GAAGGTCTTCTCTAGTACTTCTTTCTTCCGGTAT--TTTTTATGTATTCCAAAATAATTTTTTGTAG---
TTTTTCACATCATTTTGAGCTCCGCACAATAGCTATATCCATTGTAGCTTTTTTAGG--TCAGAGTTCTAGCTGCCGACA
ATCTCCCTCTTTTGGTGTATCTTGCATTTTAAGAGAGAAAAGGCATTAGAGTTGCATCATAAAGTGGAATATAGTTTCAA
AA------AAAATAATAGTAGGAAAATATGATGCAAAATGGATGTATCAA------------------------------
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---------------------------------------------------
>chr1B_3
--GACAACACTAAAGGAAGAACAACACAACACATCA-TCAAAACATTGAACAAAAACCAACGACTTCACTTGATTACTTA
TAACAAGATTTCTCC-ATGTCCTCAAGAACTAA----TGGAACTACTCACAAATCATATTCATGTTCATGATCAGAGGAG
AATAAT-ATATAATTAACAATCTGAACATATAATATTCCTCCAAGTAAATCAACTAGCATCAACTACAAGATATAATCAA
CACTACTAGTAA-CCCACAGGTACCAATTTCAGGTTT-GAGAC-AACGGTTGGATACAAGAGATGAACTAGGTTTG-GAG
AGGAGATGGTGCTGGTG-AGATGTTGATGGAGATGAGTTCTCCCATGATGAGAGGAACGTTAGTGATGACGATAGC-TTC
GATTT-CCCCCTCCTGGAGGGAAGTATCCCCGACGAAATTGCTCTGTCAGAGAGCAAAAATGCTCTTGTCCTGGTCCCGC
CTCAAGATGGCGGCGCTCCGTCCTGAAAGTC-TTCTCTTGAATT-TTTTTTCTAGAGGAAATGACTTCATATGGCGGAAG
ATGGACATCGG-TGGACCTCT--------------------GTGGGCCCCACAAG-------------------------
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---------------------------------------------------
>chr1B_3
--GACACCACTAGAGGAAGAACAACATA-CACATCA-TCAAAATATTGAACGAATACCA---ACTTCACATGATTAATTA
TAAGAATACTTCTCCCATGTCCTCAAGAACAAA----TGGAACTACTCAAAAATCATATTCATGTTCAAGATTATAGGAG
TATGAT-ATATGATTAAGGATATGAACATATGATCTTCCACCAAATAAACCAACTAGCATCAACTACAAGATGTAATCAA
CACTACTAGCAA-CCCACAGGTACCAATCTGAGGTTTTGAGAC-AAAGATTAAATACAACAGATGAACTAGGGTTT-GAG
ATGAGATGGTGCTAGTGAAGGTGTTGATGGAGATGAGTCCTCACGCGATGACAGGAGCGTTGGTGATGACGATGGC-TTT
GATTT-CCTCCTCCTGGAGGGAAGTATCCCCGACAGGATCGCTACGCCGGAGAGCAAGAGTGCTCCTTCCCAGGTTCCTC
CTCGATATGGTGGCGCTTCATCCCAAAAGTA-TTCTTCT--ATT-TTTTTCTAGGGAAAAATGGCCTCATATAGCAGAAG
GAGGGCACCAG-AGG-CCTTT--------------------GTGGGCCCCATAAGACATCAGGGCGTGCCCA--------
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---------------------------------------------------
>chr3D_4
---ACACCACTAGAGGAAGAACAACATAACACA-CA-TCAAAATATTGAACGAAAACCA---ACTTCACATGATTACTTA
TAATAAGACTTCTCCCATGTCCTCAAGAACAAA----TAGAAATACTCACAAATCATATTCATGTTCATAATTAGAGGAG
AATAATAATATGATTAACAATCTGAACATATGATCTTCCACCAAATAAACCAACTAGCATCAACTACAAGGTGTAATCAA
CACTACTAGCAA-CCCACATGTACTAATCTGGGG-TTCGAGAC-AAAGATTGAATACAAGAGATGTACTACGGTTTTGAG
ATGAGATGGTGCTAGTGAAGATGTTGATGGAGATGAGCCCTCCCATGATGAGAGGAGCATTGGTGATGATGATGGA-TTT
GATTTTCCCCCTCTTGGAGGGAAGTATCCCCGGCGGAATCACTCCACCGGAGAGAAAA-GTGCTCCTGCGTAGGTTCTGC
CTCAAGACGGCGGCGCTTCACCCCGAAAGTC-TTCTCTT--ATT-GTTTTTCTAGGGAAAATTGCCTCATATAGAAGAAT
ATGGGCACCAG-AGGGCATCT--------------------GTGGGCCC-------------------------------
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---------------------------------------------------
>chr3A_14
-------------AGGAAGAATAACATAACACATCATTCAAAACATTGAACAAAAGCTA---ACTTCACATGATTACTTA
TAA-AAGACTTCTCACATGTCCTCAAGAACAACGT-----AACTACTCACAAAGCATATTCATGTTCATGGTCAGAGGAG
AATAAT-ATTTGATTAACAATCTGAACATATGATCTTCCACCAAATAAACCAACTAGCATCAACTACAAGATGTAATCAA
CACTACTAGCAA-CCCATAGGTACCAATATGAGGTTTTGATAC-TAAGATTGAATACAAGAGATTAACTAGGGTTTGGAG
ATGAGATGGTGCTAGTGAATATGTTGATGGAGATGAGTCATCCCATGATGAGAGGAGCATTGGTGATGACGATGGC-TTC
GACTT-GCCCCTCTA-GAGGGAAGTA-CCCCGGCAGAATCGCTCCACCGGAGAGCAAACGTGATCCTGCCCTGGTTCCAC
CTCAAGGCAGTGGCGCTTCATCCCGGAAGTCTTTCTCTT--ATT-TATTTTCTAGGGAAAATGGCTTCTTATAGCAGAAG
ATGGGAATCGG-TGGACCTCT--------------------ATGGGCCCCACT-GGCACCTGGGCATGCCC---------
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---------------------------------------------------
>chr6A_2750
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-------TATGACATCCTCAAACAGCGAGGGCCTGCTGCCCTTGATCTTATCAAGAATGGACCCAACATGGCGGCAAAGC
GTTCAGGAGCATAGGCAGC------TTCTTGCTGTTAACCATGCGTACAGATGTATAATAGTCCTGTGGAGATACTTCCT
CCATCCCATAATATAAGATCGTTTTGCAAGCTGTTTTAGCTCGCAAAAAGATCTCATATTATGGGACGGAGGGAGATACA
ATGTAATCTGATGGCGTTCCAGTTAGTGGATGCACAACCTGGAAAACCTAAGAGCCAATGCTAGTGATATACCACTGCCT
TTGCTAACGTGTGGAGTTGGCTGTGGTGATC-AAAACTGTGAGATATGTGTATAGTTGTTGGTTCTTCAGAAATTTTGTG
CAAGCAAAAAGATTATCAGGTCTTAATTTTGGATGTATATACTTGCCTGCAGCAAAAGATTTTTCGGGTCAAAACCACCT
GATCTTTGTCGGTCAGGCTTCAGTTGCGGTTCTTTGCTAAAGATTTTTCGGTTATATAAGCTTGTTAGTCAAAACCAGCT
GATCCTTGTCGGTCAGGCTTCAGTTGCGGTTCTTTGCTTCCTTGAGTTTTTTTGTACCCTGGACCTGGAGTTGGTTCTTC
CCCAAGGAAGAATTTCTTCTCAGACAAAATGCTTGTTTGGAATACAACAAATCTT-TTTTTTTCTCAACAATTTGTCCCC
GAACACAACTTTTTTTTTCACAACTGATGTATATTAACTCGTTCCAATCACTCACACACACTTGGCAAATTTGTTCCCAA
ATTGCCAATTCAAACCCTTGAAAAGATGTACAAAAGGACAAGATTTAATTTGCTATTTGTACAGCACAGGGACACAAATC
CTCCAATACAAACGTTATCATGCTATATAAACGCACCAACAGTGCACCTACATCATCATATATAACTTCCTATCTAACAA
CATCCACCTGCTCGATGACTGAAAGAAGGCCTCGAGATCGATACGAAGAAGCCCAGCATCCGCTCCGAAGAACACGACCA
TGGACCGATCTCTCCAAGGACGATGCTGCCTGGTTGAAGACCATGTCCTTCCATAGCTCCCAAAACACCGGAGCAAGTAA
CGAACCGTGAGGCGCTGGTTTGGAGCTCCACCAGCCTGGCAAGAAGCC-ATTCGCCCTAGC-CACCGAAACGATTTTGCA
AGAACTCCACCAGTCTAGCAAAGAATCGTTCCCCCTAGGCACCCCAATTAATTCTGCCCCTAGC----------------
---------------------------------------------------
>SNPs
---------------S--S-------------------------------------------------------------
---------S------------------------------S------------------------------------S--
----------------------------------S--S------------------------------S-----------
-------------------S-----------------------S------------------------------------
--------S---------------------------S------------------------------S------------
--------------------S-----------S-------------------S------------S--------------
------S-----S-----------------S------S--------------------S---------------------
-------------------------------------------------------------S------------------
--------------------------------------------SS--------------SS--------S----S----
-------SS--SS--------SS-------------------------SS--------S------------S--------
-----------SSS--------------------S------SS----------S---------S-S--------S-SS--
--SSSSSS------S------------------S-----S-SS-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS--------S--------------------------------------------SS------------------
-S-----S-------S-S-SSSSSS-------------S-----S------------S--S--S--S--S----------
--S---------------------------------------------S-----------------S---S---------
---------------S--------------------S-----S-------S-----------------------------
--S----------------------------S-------------------S----------------------------
---------S------------------S----------S------------------------S---------------
-----------------------------------------------------------------------------S--
---------S-----------------------------------------S----------------------------
---------------------S----------S----------------------S-----------------S----S-
S--------SS-SSS-----------------------S----S------------------------------S-----
----S----------S---------S----------S----S---S---SS----S------------------------
-------------------S-------S-SSSS-SSSS------------------------S-S-SS-SS---------
--------S----------S----SS------SSSSSSSSS---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S---------S----------SSS-------------S----
------S----S---S-----S------S-------------S---------------------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_998
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CCCTTCCCGATCGGAACAAA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_2245
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GGTCTTGGTCAAGCACGGTA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>forward_1784
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TAGGAGGAGGGACGGTTCTG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_2647
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CTTGCAGCTGATCGGTCTGA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>forward_2264
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GGTCTTGGTCAAGCACGGTA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_4085
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CTTCGCCCCTGTTGATCTGT---------------------------
