>input_sequence_42604
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------------------ATGGCGGCAACGACGACGGCGACGTCGAGGCGGGCGCCGGCCGTCCTCGT------CCTCGT
CCTCCTCCTCCTCCCCGGGGCGGCG------TCCGCCAGGGGCGACGGCAACGGCGTGTACGAGCCGTGCGCGGACGCGA
CGGTGAGCCGCGGCGACGGGTTCACCTTCGGGGTGGCCTTCGCGGGGCGCGACGCCTTCTTCTCCGGCGGCGTGCAGCTC
TCCCCCTGCGACAGCCGCCTCAACCTGGCGAACGCCGGCCCGCTGCTCGCGCTCTTCCGCCCCACCGTCGACGAGATTTC
GCTCCTCACCGTCAACGCCTCCGACCCCAAAGCCCTGGTGAGTC-AGTAGCCCTCCGCCGAGCTCTGCACCTCCTCAAGC
CTTTCCTCCGG-TTTTGTTGTTCGATCGAAGCTTTTTGCGCGAGGAATATGCTCCTTATGACGAACCCTAATCGATTTTC
CCATTTGCACCCAGGGCCAGGGGAACCAACTGTTTGGCACAAAGAATTGTCTTGTAGCTAGCTCC-----TTTTTACTTG
T----------TCTATAAATAGTAAATAAATCACAGTGCTTTGCAACCAAGAATTTAGGATGA----CAATTATGCAGTA
CTCCCTCGTTGTCTTTTGTTGTGAGA------------GAAGAAATTCAAATCGG-TGGGGCACCTCACAAATCCATTGA
TGATCGCCTACTGCTTGGCGAGGTTTAAGCCAAAAAAACGTTGAGCTGGACACTGCCCCACAGGCAACGAGTCCAGACAA
AGCGCCAGCTGCGTGCTTGGGCTCATTGGCCGTAGGAGGGAGGGTAGATCCGTCGATGGCGCTCTCGACATGCCTCCGTG
-TTCTCTGTGGCCCAACCTAAGTGCTGGGTTTGTTCTTATTACTTGGTCGGTGCAATCTCGTCTGAGGATTTATTGAATG
TGCTGTCCCCTCACTCTGGAGAAATTTCCCCTTCCACTAATTGATTGGGCTCAGCCGTTTGGTTTTAAGATAAGAGTACT
AGATGGCCGACTGTCATGATGAGGACCCTCATTTATTTCTCAT----TACCTGATTCATTCACTGGCATTCTGTTTTTT-
---CTTGCAAATACTGTACTCCTACTCAAGATGCTGCA-----CAAGAATGATTTCAGAAATACTGAAAACTTCAGCACA
CTGTAATTAATTGCCGAGACAACCTGCAGTAGATACAGCCTGCTGAGAAGAACTGCACAATAGCTT-GCATAGTTCTATC
ATGATACGTACAATTGTTACTTTCTTGTACTAGTACATA----------AGATAGGTCTACTTATCAAATGTCTTGTTGG
ACA--GTTCTGACATAAAAGATGATGGGTTCATCATTAGTCTTAATACGCCGTTCTTCCACTCTGTTCCAGACATCTGCT
GGTGGGTACATGGTGGCCTTTGCCGGGAGGAAGTTCGCGGCAAGGTCGCCGCCCGTGTTCGTCGGCAACAGCTCGTACAC
AGTCACCGGCTTCACCCTGGTGCGCCCATAA---ACCCATAACCTGGACCAAATCGCCGGTGATCGTTT---------GC
TCATCCCTGACGCG-CTCTGTTTCCCAGGTGTTCGAGTTCCACAAGGGCACGCTGCAGAACCTCTTCTGGAAGGCGGACG
GCTGCTCATCGTGCTCCGGGAACCCTAACTTCGGGTGCGTCGAGAACAGCTGCGCGATCAAGACGTCGAGCTGCAGGGGA
A---ACGGCGGCGGGCAGGTGGACTGCAGCCCTGGGATCCAGCTCGCCTTCTCCGGCACCGACAAGCACGAGGCGGTGCT
CAACTCGTGGTACGAGGTGTCCAAGCTGAAGCAGTACTCCCTCTTCGGCCTCTTCTCCAACCTCAAGGACTCGCTGGCGG
GCCAGTTCAGCAACTTCTTCTAG---------------------------------------------------------
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---------------------------------------------------
>chr5B_1_TraesCS5B01G427700
TCCAGTAACTTTTCTTCTTTGAAAAATTCATCATTTTTTCGATGAATGTCCTTGTCTAGCATAAGTTTTTCTCATGTGCG
CGCGCTATAACTACTCAGCAGTTCAGAAGTAACCTCCATAC---AAGTTGTTTGTTTCCCCTTTTTCCCCGCAAAAAAGA
TAAAAGCTGTTTGTTTCCTGTTCCAACTTGTGCCTCGGTGTATTACGGTTGCTTAAAGCGTCCAGATAGACTCACTTGCT
ACTGAAAATGTGTAGGCCCAGAAGCTGGCAAACGGCAAGTGAATAAACCCGCGGTGAACCGATCGCCCAAGGCTGCCGAA
GACTCCCCAGCGCTGGAAGGGAAGCATCGCCGTGCCGGTTCCGTTGATCTGCTGCTCAAGAGAGTTGAGCTGCAGGCCTG
ACAAGCCATCTGAAGCCCCCATCTACCGTCGTCAAGGTTCGAAGTCAGCATGCTGCGCTCTGTTACATGCGCGGCCTTGG
ATTCTGGAAGGTCCATTGGAACAATGTGCATCTATTTCTTAGCCATAT---AGGTATGCAGCC-AAATGCTCATCTCATG
AGATGAGGTCTAGCTAGTGCTTGGATATGTATGTGCTGGTCAGCTGGTGCCTCTAGACCTGGGGGTTACCATAGCTTGTA
CTGTTGTATTTGTAGCTAAGAGCAAGCATGGACTCACATTTTCTGGAACTATTTTTTGTACAATAAAAAA--ATTCTGAA
ACTTTATGTTATTTTTAAGGGTAACCCTGTGCTTTTCACTGGTGTGTGCTCTGTA-------------------------
---------------------------------------GTCTCTACCTTGCTGAGCTGC--------------------
------------------------------------TGAGTTGCTTGTTAAATCTTGGGCCCGTCAGAACAAATGGGCTT
CGGCCCAGCAAGAAAGCCAGCTCATTCTAC-----CCCTTTATTCCTTGCCCCGACGCGACGCGTTTCGTTTGGTTCCGT
TTCCTTGGCGTGAGCCGTAGCGAAACCGTCATCCATCGACGACTTCCGTCGCGCCCGAGGCAC----AGCGAGGCGCCCG
AAACAATTAATTGTCTCCATGGCGGCAACGACGACGGCGACGTCGAGGCGGGCGCCGGCCGTCCTCGT------CCTCGT
CCTCCTCCTCCTCCCCGGGGCGGCG------TCCGCCAGGGGCGACGGCAACGGCGTGTACGAGCCGTGCGCGGACGCGA
CGGTGAGCCGCGGCGACGGGTTCACCTTCGGGGTGGCCTTCGCGGGGCGCGACGCCTTCTTCTCCGGCGGCGTGCAGCTC
TCCCCCTGCGACAGCCGCCTCAACCTGGCGAACGCCGGCCCGCTGCTCGCGCTCTTCCGCCCCACCGTCGACGAGATTTC
GCTCCTCACCGTCAACGCCTCCGACCCCAAAGCCCTGGTGAGTC-AGTAGCCCTCCGCCGAGCTCTGCACCTCCTCAAGC
CTTTCCTCCGG-TTTTGTTGTTCGATCGAAGCTTTTTGCGCGAGGAATATGCTCCTTATGACGAACCCTAATCGATTTTC
CCATTTGCACCCAGGGCCAGGGGAACCAACTGTTTGGCACAAAGAATTGTCTTGTAGCTAGCTCC-----TTTTTACTTG
T----------TCTATAAATAGTAAATAAATCACAGTGCTTTGCAACCAAGAATTTAGGATGA----CAATTATGCAGTA
CTCCCTCGTTGTCTTTTGTTGTGAGA------------GAAGAAATTCAAATCGG-TGGGGCACCTCACAAATCCATTGA
TGATCGCCTACTGCTTGGCGAGGTTTAAGCCAAAAAAACGTTGAGCTGGACACTGCCCCACAGGCAACGAGTCCAGACAA
AGCGCCAGCTGCGTGCTTGGGCTCATTGGCCGTAGGAGGGAGGGTAGATCCGTCGATGGCGCTCTCGACATGCCTCCGTG
-TTCTCTGTGGCCCAACCTAAGTGCTGGGTTTGTTCTTATTACTTGGTCGGTGCAATCTCGTCTGAGGATTTATTGAATG
TGCTGTCCCCTCACTCTGGAGAAATTTCCCCTTCCACTAATTGATTGGGCTCAGCCGTTTGGTTTTAAGATAAGAGTACT
AGATGGCCGACTGTCATGATGAGGACCCTCATTTATTTCTCAT----TACCTGATTCATTCACTGGCATTCTGTTTTTT-
---CTTGCAAATACTGTACTCCTACTCAAGATGCTGCA-----CAAGAATGATTTCAGAAATACTGAAAACTTCAGCACA
CTGTAATTAATTGCCGAGACAACCTGCAGTAGATACAGCCTGCTGAGAAGAACTGCACAATAGCTT-GCATAGTTCTATC
ATGATACGTACAATTGTTACTTTCTTGTACTAGTACATA----------AGATAGGTCTACTTATCAAATGTCTTGTTGG
ACA--GTTCTGACATAAAAGATGATGGGTTCATCATTAGTCTTAATACGCCGTTCTTCCACTCTGTTCCAGACATCTGCT
GGTGGGTACATGGTGGCCTTTGCCGGGAGGAAGTTCGCGGCAAGGTCGCCGCCCGTGTTCGTCGGCAACAGCTCGTACAC
AGTCACCGGCTTCACCCTGGTGCGCCCATAA---ACCCATAACCTGGACCAAATCGCCGGTGATCGTTT---------GC
TCATCCCTGACGCG-CTCTGTTTCCCAGGTGTTCGAGTTCCACAAGGGCACGCTGCAGAACCTCTTCTGGAAGGCGGACG
GCTGCTCATCGTGCTCCGGGAACCCTAACTTCGGGTGCGTCGAGAACAGCTGCGCGATCAAGACGTCGAGCTGCAGGGGA
A---ACGGCGGCGGGCAGGTGGACTGCAGCCCTGGGATCCAGCTCGCCTTCTCCGGCACCGACAAGCACGAGGCGGTGCT
CAACTCGTGGTACGAGGTGTCCAAGCTGAAGCAGTACTCCCTCTTCGGCCTCTTCTCCAACCTCAAGGACTCGCTGGCGG
GCCAGTTCAGCAACTTCTTCTAGCGC---GTCGTGTGTGCTCGGTTAGTCCCCCTCGTCTCGAGCAGCTTCCGGAGGCAG
TCACACACGTCGTACCATAGCGTCGTCACC----CCCGTGTGCTGTTTGTTCAAGGTATCGTGGTATCGTCGTGTCACTT
GTGTAAC--------------CAAAATGCTTTGTATATCGATTATCCAGCTGCTATGTACACTCGTTAATTGTTAGGTGT
AGTCGTATAGAGACGATGTAAGCTACGCTACGT---ACGAAACTAGTGTATTTTTTGTAATGTGTGTATAAAAATGGGAT
TTGTGTATTTTTGTGGT--GTCGGTATGGACGAGATCGTAGTTTGAAACTAGCACATGGTTTGACTGTAACTATCTCTAG
TAATCTCTATATAATAATTAAAAAAATGTAATGTTCGCATTTCAGCTTCCTTCCCACCACCCCTTCGTCCAACCTTTCAT
GTATATGACAATCAACCACATTAATTTACTTACCTTCTGAACCAATTGCACTTTAATTTACTTACCAAACTTCTAATTAA
AATAGGGTTTTTATCAGTTTTGCCATCGCTTGTACTACACTACTCAGTTTTGCCATTAAAAAAATTCACTGCTCAAAAAT
GCCACTGTTTCGTTGGACGTGTGTCCAAAAAAGTCA-TTTTTCATCATTACCGTCATGTCAAAGGCCGTTGACCGAAGGC
AGATGACAAAAATACCCCTATCCCG-TTTGTCAACTATCCTCTCTTTGTTTGAGCTGTGGGTCGGGGCCAC---------
--------------------------------------------------------------------------------
----------------GCCACGGGATTTCGAACCCACGACCACGACCTGGACAGGCTCTCGTGCTAACCAGCTGAGCTAA
GGGAAAGTTATGAAATAGAAGGAAATATATGTCTCATATCCTTTAGGTAAATA--ATATTCAAACC-------------T
ATCATTTCTTGTTGCTCGCTACTCCATTTCTCCAGCTAGCTAATTCATGCATCACACACTAATTGAGAGCAACAACAAAT
ATGATAGCAGGACGCACATGATTTTCTAAATTTCTCTGAAAATTTAAGCAT
>chrUn_3
--CAGTAACTTTTCTTCTTCGGAAAAGGCATCATTTTTTTGATAAATGTCCTTGTCTAGCATAAGTTCTTCTCATGTGCG
CGCGCTATAACTACTCATCAGTTCAGAAGTAATCTCCATACTACAAGCTGTTTGTTT--CCTTTTTCCCCACAAAAAA-A
CAAAAGCTGTTTGTTTCCTGCTCCAACTTGTGCCTCGGTTTA-TACGGTTGCTTAAAGCTTCCAGATAGACTCACTTGCT
ACTGAAAAGATGCAGGCACAGAAGTTGGCAAACGGCAAGTGAATAAACCTGCGGTGAACCGATCCCCCAAGGCTACCGAA
GACTCCCCAGCGCTGGAAGGGAAGCATCGCCGTGCCGGTTCCGTTGGTCTGCTGCTCAAGAGAGTTGAGCTGCAGGCTTG
ACAAGCCATCTGAAGCCC-CATCTACCGTCGTCAAGGTTCGAAGTCAGCATGCTGCGCTCTGATACATGGGCGGCCTTAG
ATTCTGGAAGGTCCATTGGAGCAATGTGCATTTATTTCTTAGCCATATTATAGGTATGCAGTCAAAATGCTCATCTCAGG
AGATGAGATCTAGCTAGTGCTTGGATATGTATGTGCTGGTCAGCTGGTGCCTCTAGTCCTGGAGGTTACCATAGCTTGTA
CTGTTGTATTTGTAGCTAAGAGCAAGTATGGGCTCACATTTTCTGGAACTATTTTTTGTACAATAAAAAACAATTCTGAA
ACTTTATGTTTTTATCAAGGGTAACCCCGTGCTTTTCACTGGTGTGTGCTCTGTA-------------------------
---------------------------------------GTCTCTACCTTGCTGAGCTGCTGGGCCATGGTGCCTGAAGT
AGTAGTTTTTTTTTTAGAAGAATCTGAAGTAGTAGTTGAGTTGCTTGTTAAATCTCGGGCCTATCAGACCAAATGGGCTT
CGGCCCAGCAAGAAAGCCAGCTCATTCTAC-----CT-TTTATTCCTTGCCCCGACGCGACGCGTTTCGTTTGGTTCCGT
TTGCTTGGCGTGAACCGTAGCGGAACCGTCATCCATCGACGACTTCCGTCGCGCCCGAGGCACCCACAGCGAGGCGCCCG
AAACAATTGTCTGTCTCCATGGCGGCAACGACGACGGCGACGTCGAGGCGGGCGCCGGCCGTCCTCC------------T
CCTCCTCCTCCTCGCGGCGGCGTCCGCGGCTTCGGCCAGGGGCGACGGCAACGGCGTGTACGAGCCGTGCGCGGACGCGA
CGGTGAGCCGCGGCGACGGGTTCACCTTCGGGGTGGCCTTCGCGGGCCGCGACGCCTTCTTCTCCGGCGGCGTGCAGCTC
TCGCCCTGCGACAGCCGCCTCAACCTTGCCGGCGCCGGCCCGCAGCTCGCGCTCTTCCGCCCCACCGTCGACGAGATTTC
GCTCCTCACCGTCAACGCTTCCGACCCCAAAGCCCTGGTGAGTCGAGTCGTCCTCCGCCGAG--CTGCACCTCCTCAAGC
CTTTCCTCCGAATTTTGTTGTTCGATCGAAGCTTTTTGCGCGAGGAATATGCTCCGTATGACGAACCCTAATTGATTT-C
CCATTTGCACC-----CCAGGGGAACCAATTGTTTGGCACAAAGAATTGTCTTCTAG----CTAGCTCCTTTTTTACTTC
T----------TCTATAAATAGTAAATAAATCATAGTGCTTTGCAAGCAAGAATTTGGGATGGCCATCAATCATGCGGTA
CGCCCTCCTTGCCTTTTGTCAATTAGTGTGTGAGGGATGAAGAAATTCAAATCGTTTGGGACACCTCACAAATCCATTGA
TGATCGCCTCTTGATTGGGGAGGTTTAAGCCAAACAAACGGAGAGCTGGAGACTGCCCCACAGGCAACACGTCCAGACAA
C-CGACAGCTACGTTTTTGGGCTCATTGGA--------GGAGGGTAGATCCGTTAATGGCGCTCTCAACATGCCTCCGTG
-TTCTCTGTGGCCCAACCTAAGTGCTAGGTTGGAG--TATTACTTGGTCGGTGCAATCTCGTCTGAGGATTTATTGAATG
TGCTGTCCCCTCACTCTGGGGAAATTTCCCCTTCAACTAATTGATTGGGCTCAGCCGTTTGTTTTTAAGATAGTATCAT-
-GATGACCGATTATTATGATGAGGACGCTCATTTATTTCTCATCTAGTACCTGATTCATTGACTGGCATTCTGTTTTTT-
---CTTGCAAATATGGGTTAATAAGAC----TGCTGCA-----TAAGAACGATTTCAGTAATACTGAAAACTTCAGCACA
CTGTAATTT-TTTCCGAGACAACCTGGAGTAGATACGGCCTGCTGAGAAGAACTGCACAATAGCTT-GCATCGTTCTATC
ATGA----TACAATTGTTACTTTCTTGTAGTAG---ATA----------AGATAGGTGTACTCATCAAATGTCTTGTTGG
ACAGTGTTCTGACATAAAAGATGATGGGTTCATCATTAGTCCTAACATGCCGTTCTTTCGCTCTGTTCCAGACATCTGCT
GGTGGGTACATGGTGGCCTTTGCCGGGAGGAAATTCGCGGCAAGGTCGCCGCCCGTGTTCGTCGGCAACAGCTCGTACAC
AGTCACCGGCTTCACCCTGGTGCGCCCATAA---ACCCATAGGCTGGAGGATACTACTCTAGATCTTACGCCCACAAAGC
TCATCACTGACTCC-CTCTGTCTCCCAGGTGTTCGAGTTCCACAAGGGCACGCTCCAGAACCTCTTCTGGAAGGCGGACG
GCTGCTCGTCGTGCTCCGGGCAAGCCAACTTTGGGTGCGTCGAAAACAGCTGCGCGATCAAGACGTCGAGCTGCAAGGGC
A---GCGGCGGCGGGCAGGTGGACTGCAGCCCCGGGATCCAGCTCGCCTTCTCCGGCACCGACAAGCACGAGGCAGTGCT
CAACTCGTGGTACGAGGTGTCCAAGCTGAAGCAGTACTCCCTCTTCGGGCTCTTCTCCAACCTCAAGGACTCACTTGCGG
GGCAGTTCAGCAACTTCTTCTAGCAT---GTCGTGCGTGCTCGGTCACGGTCAGTCCCCCCGGCCGTCTTCCTCCTCCTC
GTGCA----------GCTTCATATTGCGTCGTCGCCCGTGTACTGTTTGTTGTCCCG-----------------------
--TGCCGTGTAACGTTTGTGACCAACTGCTTTGTGTATCGATTAT-CAGCTGCTACGTACACTCGTTAACTGTTAGG---
-----TATAGAGACAATGTAAGT-----TACGT---ACGAAACTAGTGTATTTTTGTAATGTA------T--AATGGAAT
TTGTGTAGTTTTGTGGT--G---GTATGGACGAGAAAGTAGTTTGAAACTAGCGCATTGTTTGACTGT------------
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---------------------------------------------------
>chr5A_3
--CAGTAACTTTTCTTCTTCGGAAAAGGCATCATTTTTTCGATAAATGTCCTTGTCTAGCATAAGTTTTTCTCATGTGTG
TGCGCTATAACTACTCAGCAGTTCAGAAATAATCTCCATACTACAAGCTGTTTGTTT--CCTTTTTCCCCAGAAAAAA-A
TAAAAGCTGTTTGTTTCCTGTTCCAACTTGTGCCTCGGTTTATTACGGTTGCTTAAAGCTTCCAGATAGACTCACTTGCT
ACTGAAAATGTGCAGGCACAGAAACTGGCAAACGGCAAGTGAATAAACCTGCGGTGAGCCGATCCCCCAAGGCTACCGAA
GACTCCCCAGCGCTGGAAGGGAAGCATCGCCGTGCCGGTTCCGTTGATCTGTTGTTCAAGAGAGTTGAGCTGCAGGCTTG
ACAAGCCATCTGAAGCCC-TATCTACCGTCGTCAAGGTTTGAAGCATGCGACGA-----------------CGGCCTTAG
ATTCTGGAAGGTCCATTGGAGCAATTTGCATTTATTTCTTAGCCATAT---AGGTATGCAGTC-AAATGCTCATCTCATG
AGATGAGATCTAGCTAGTGCTTGGATATGTATGTGCTGGTCAGCTGGTGCCTCTAGTCCTGGAGGTTACCATAGCTTGTA
CTGTTGTATTTGTAGCTAAGAGCAAGTATGGACTCACATTTTCTGGGACTATTTTTTGTACAATAAA----AATTCTGAA
ATGTTATGTTTCAAG---GGGTAACCCTGTGTTTTTCACTGGTGTGTGCTCTGTAATCTGTACCTTGCTTTTTTTTTTTG
AGCAATTGTAGTCTGTACCTTGCTTTTTTTGAGGGGTTAGTCTGTACCTTGCTGAGTTGCTGGGCCATGGTGTCTGAAGT
ATAAGCT----------------------TAGTAGTAGACTTGCTTGTTAAGGCTGCGGCCCATCAGACGAAATGGGCTC
CGGCCCAGCAAGAAAGCCAGCTCATTCTACCCATTCCCTTTATTCCTTGCCCCGACGCGACGCGTTTTGTTTTGTTCCGT
TTCCTTGGCGTGAACCGTAGCGGAACCGTCATCCATCGACGACTTCCGTCGCGCCCGAGGCA----CAGCGAGGCGCCCG
AAACAATTGTCTGTCTCCATGGCGGCAACGACGACGGCGACGTCGAGGCGGGCGCCGGCCGTCCTCGCCCTCGCCCTCGC
CCTCCTCCTCCTCGCGGCGGCGCCCTCGGCCTCCGCCAGGGGCGACGGCAACGGCGTGTACGAGCCGTGCGCGGACGCGA
CGGTGAGCCGCGGCGACGGGTTCACCTTCGGGGTGGCCTTCGCGGGGCGCGACGCCTTCTTCTCCGGCGGCGTGCAGCTC
TCCCCCTGCGACAGCCGCCTCAACCTGGCCGGCGCCGGCCCGCTGCTCGCGCTCTTCCGCCCCACCGTCGACGAGATTTC
GCTCCTCACCGTCAACGCCTCCGGCGCCGGCGACCTGGTTAGTC-----GCCCTCCGCCGAG--CTGCACCTCCTCAAGC
CTTCCCTCCTGATTTTGCTGTTCGATCGAAGCTTTTTGTGCGAGGAATATAATCCGTAGGACGAACCCTAATTGATTTAC
CCATTTGCACC-----CCAGGGGAACTAATTGTTTGGCACAAAGAATTGTCTGCTAG----CTCC-----TTTTTACTTC
TTCTATTCTACTCTATAAATAGTAAATAAATCATGGTACTTTGCAAGCAAGAATTTGGGATGGCCATCAATCATGCAGTA
CTCCCTCCTTGCCTTTTGTCAATTAGTGTGTGAGGGATGAAGAAATTCAAATCGTTGGGGAGACCTCGCAAATCCATCGA
TGATGGCCTCTTGATTGGGGAGGTTTAAGCCAAAAAAACGGAGAGCTGGACAGTGTCCCACAAGCAACACGTCCAGACAA
C-CGACAGCTACATTTTTGGGCTCATTGGA--------GGAGGGTGGATCCGTTAATGGCGCTCTCGACATGCCTCCGTG
TTTCTCTGTGGCCCAACCTAGG------------------TACTTGGTCGTTGCAATCTCGTCTGAGGATTTATTGAATG
TGCTGTCCCCTCACTTTGGAGAAATTTCCCCTTCAACTGATTGATTGGGCTCAGCCGTTTGTTTTTAAGATAGTA-----
--ATGGCAGACTGTCATGATGAGGACCCTCATTTATTTCTCATC---TTCCTGATCCATTGACGGCATTTTGTTTTTTTT
CCCCTTGCAAATATGGGTCAAG-ACTCAAGATGCTGCATACAGTAAGAACGATTTCAGTAGTACTGAAAATTTCAGCACA
CTGTAATTAGTTGCCGAGACAA----------------CCTGCTGAGAAGAACTGCACAATAGCTTTGCATAGTTCAATC
ATGA----TACAATTGTTACTTTCTTGTACTCGAGTAGATAAGATAGCCAGATAGGTGTACTTATGAAATGTCTTGTTGG
ACA--GTTCTGACATAAAAGATGATGGGTTCATCATTAGTTCTAACATGCCGTTCTTTCACTCTGTTCCAGACATCCGCT
GGTGGGTACATGGTGGCATTTGCCGGGAGGAAATTCGCGGCAAGGTCGCCGCCCGTGTTCGTCGGCAACAGCTCGTACAC
AGTCACCGGCTTCACCCTGGTGCGCCCATAATTAACCCGTAACCTGGGCCAAATCACCGGCGACCATCT---------GC
TCAACTGACGCCTATCTCTGTTTCCCAGGTGTTCGAGTTCCACAAGGGCACGCTCCAGAACCTCTTCTGGAAGTCCGACG
GCTGCTCGTCGTGCTCCGGGCAGGCCAACTTCGGGTGCGTCGAGAACAGTTGCGCGATCAAGACGTCGAGCTGCAGGGGC
AACGGCGGCGGCGGGCAGGTGGACTGCAGCCCCGGGATCCAGCTGGCCTTCTCCGGCACGGACAAGCACGAGGCGGTGCT
CAACTCGTGGTACGAGGTGTCCAAGCTGAAGCAGTACTCCCTCTTCGGCCTCTTCTCCGGCCTCAAGGACTCCCTGGCCG
GCCAGTTCAGCAACTTCTTCTAGCATCGTGTCGTGTGTGCTCGGTCCGTCCACATCGT-----GCAGCTTCTGAAGGCAG
TCACACACACCCGTTGCCTCATATTGCGTCGTCACCCGTGTAGTGTTTGTTCAAGCTGTCGCGATATACTGTCACCCGTG
CATGCCGTGTGACGTTTGTAACAAAATGCTCTGTATATCGATTAT-CAGCTGCTACGTACGCTCGTTAACTGATAGGTAT
A----TATAGAGACAGTGTAAGC-----TACGTACGACGAAACTAGTGTATTTTTTGTAATGTATAATGT--AATGGTAT
TTGTGTATTTTTGTGGTACG---GTATGGAAGAGATGGTGGTTTGAAACGAGTACATTGATTGACTGT------------
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---------------------------------------------------
>chr3D_3342
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--------------------------------------------------------------------------AAATAA
AATTAGGTTTTTATCAGTTTTGCCATCGGTTGTACTACACTACTCAGTTATGCCACTAATTTTTTTCACTGCTCAGAAAT
GCCACTGTTTCGTTAGGCGCGTGCTCAAAAAAGCCA-TTTTTCACCGTTACCGTCAGGTCAATGGGCGTTGACCGAAGAT
AGATGACAAAAATACCCCTATCCCGTTTTGTCAACTATCCTCTCTTTGTTTGAGCAT-----------------------
------------------------------------------------------------------------TGAAAATA
GAAGACAAAAATTGGAGCCAGGGGATTTCGAACCCAAGACCATGACCAGGAAAGGCGCGCGTGCTAACTAGTTGAGCTAA
GGGAAAGTTTTAGTATAGAAGGAAACGTACGTCCTATATCCTTTAGGTAAATA--ATAATCAAACCGAACAGTATGTAAT
ATCGTTTCTTGTTGCTCACTACTCCATTTCTCCATCTAGTGAATTCATGCATCACACAGTAATTGACAGCAACAACAAAT
ATGATAGCAGGA-GCACATGATTTTCTAAATTTCTCTGAAAATTTCAGCAT
>chr1B_3350
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--TAGGGTTTTTATCAGTTTTGCCATCGGTCGTACTACACTACTCAGTTCTGCCACTAAAATTTTTCACTGCTCAGAAAT
GCCACTATTCCGTTAGGCGCGTGTTCAAAAA-GCCATTTTTTCGCCGTTACCGTCAGGACGGTGGACGTTGACCAAAGGT
AGATGACGAAAATATCCCTATCCCG-TTTGTCAACTATCCTCTCTTTGTTTGAGCTATGGGC------------------
------------------------------------------------------TCAC----------------AAAATA
GAAGACAAAAATTGGAGCCAGGAGATTTCGAACTCAAGACCACGTCCTGGACAGGTGCGCGTGCTAACCAGTTGAGCTAA
GGGAAAGTTTTGATATACAAGGAAACATATATCCTATATCCTTTAGGTAAATATAATATTCAAACTGAACAGTATATAAT
ATCCTTTCTTGTTGCTCACTACTCCATTTCTCCAGCTAGATAATTCATGCATCACACGCTAATTGACAGCAACAACAAAT
ATGATAGCAGGA-GGACATGATTTTCTAAATTCCTCTGAAAATTTCAGCAT
>chr6D_3351
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---AGGGTTTTTATCAGTTTTGCCATCGGTCGTACTACACTACTCAGTTCTGCCACTAAATTTTTTCACTGCTCAGAAAT
GCCACTGTTTCGTTAGGCGCGTGCTCAAAAAAGCCATTTTTTCACCGTTACCGCCAGGTCAATGGACGTTGACCAAAGGT
AGATGACGAAAATACCCCTATCCCA-TTTGTCAACTATCCTCTCTTTGTTTGAGCTATGGGC------------------
------------------------------------------------------CCACCTGTAAGGCGAGCATGAAAATA
GAAGAGAAAAATTGGAGCCAGGAGATTTCGAACTCAAGACCACGTCCTAGACAGGTGCGCGTGCTAACCAGTTGAGCTAA
GGGAAAGTTTTGATACAAAAGGAAACGTATATCCTATATCCTTTAGTTAAATATAATATTCAAACCAAACAGTATATAAT
ATCCTTTCTTGTTGCTCACTACTCCATTTCTCCAGCTAGCTAATTCATGCATCACACGCTAATTGACAGCAACAACAAAT
ATGATAGCAGGA-GCACATGATTTTCTAAATTCCTCTGAATATTTCAGCAT
>chr7D_3352
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----GGGTTTTTATCAGTTTTACCATCGGTCATACTACACTACTCAGTTCTGCCACTAAATTTTTTCACTGCTCAGAAAT
ACCACTGTTCCGTTAGGCGCGTGCTCAAAAAAACTATTTTTTCGCCGTTACCGTCAGGTCAATGGACGTTGACCAAAGGT
AGATGACGAAAATACCCCTATCCCG-TTTGTCAACTATCCTCCCTTTGTTTGAGCTGTGGGCCCACCTGTAAGGCGAGCA
TGAAAATAAAAGACAAAAATTGGAGTCAAGAGATTTCGAACCCAAGACCACAACCCACCTGTAAGGCGAGCATGAAAATA
AAAGACAAAAATTGGAGCCAAGAGATTTCGAACCCAAGACCACAACCCAAACAAGCGCGCATGCTAACCAGTTGAGCTAA
GGGAAAGTTTTGATATATAAGGAAACGTATATCCTATATCCTTTAGGTAAATATAATATTCAAA------AGTATATAAT
ATCGTTTCTTGTTGCTCACTACTCCATTTATCCAGCTAGCTAATTCATGCATCACACACTAATTGACAGCAACAACAAAT
ATGATAGCAGGA-GCACATGATTTTCTAAATTTCTCTGAAAATTTCAGCAT
>SNPs
SS-----------------S-S----SS---------------S------------------------------------
--------------------------------S--------------S---------SS-----------S-------S-
---------------------------------------S-------------------S--------------------
------------S----S-------------------------------S--------------S---------S-----
-----------------------------------------------------------------------------S--
------------------S-------------------------------------------S------S--------S-
--------------------S----------S-----------------------------S------------------
-------S------------------------------------------------S-----S-----------------
--------------------------S-----------------------------------------------------
----------S--S-S----------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------S-----S-----------
--------------------------------------------------------------------------------
-------------S--------S---------------------------------------------------------
--------SSS--------------------------------------------------------S------------
-------------S-S-S----S-S-------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------SSS------------------------------------------------
------------------------------------------------S-------------SS----------------
-------------------------------------------------------S----------------S-----S-
-----------SSSSS-------------S-----------------------S---SSSS------------------S
---------------------------------S------------S---------S-----S--------S--------
-------S---S-------SSSSSSS----------------------------S-----S-------------------
---------SS--S----S---------------------SS--------------------------SS----------
SS--S-----S---SS-------------SSSSSSSSS---------------SS-------------------------
--------------------------S----S-SSSS-------------------------------------------
----------------------------------S--------------------------S----------SS-SS-SS
S-----------------------------------------------------------S-------------------
-------------SS-SS-SSSS--------------------S-----S--------S---------------------
---------S----------------S---------S-------------------------------------------
----SSSS-------------------------SSS---------------------S----------------------
-----------------------------------------S---S-S---------S----------------------
--------------------------------S-----------------------------------------------
-------------------------------------------------------S----S----S-S------------
-----S-----S-S----------------------------------------S-------------------------
-------S------------S-SS-S-----------------------------------------------------S
----S---------------------------S-----------------------------------------------
------------------------------------------------------------------------S-------
------------------------SS-------------------S-------S-----S--S----------S------
--------SS-SSSSSS-SSSSSSSS-SS------------S-------------S-S---S-S---SS-SSSSS-SS-S
SSSSSSS--------------------------------------S---------S-------------S--------S-
-SSSS---------S--------SSSSS-----------------------------------S-SSSSSSS-----S--
--------------------SSS-------------S--------------------S----------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S---
----------------------------S--------------------S-----S-----SSS-----------S----
--------------S-S--S----S--------S----------S-S---------S-----S--S-------------S
-------------------------------------------------------------S-SSSSSSSS---------
--------------------------------------------------------------------------------
--------------------S---------------S-------------------S-S------------S--------
---------S---S-----------S-------SS---------------------------------------------
---S-------------S------------------------------------------------S-------------
------------S--------------------------------S-----
>forward_949
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------AAATCTTGGGCCCGTCAGAA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_1851
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CTGCTTGGCGAGGTTTAAGC--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>forward_1130
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GAGGCGCCCG
AAACAATTAA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_2526
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TACGCCGTTCTTCCACTCTG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>forward_1921
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AGGCAACGAGTCCAGACAA
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_3500
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CCCCTTCGTCCAACCTTTCA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
