>input_sequence_42498
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----ATGGGCATCTTGTGTTGCTTCCAGTCCGGCGCCGACAAGCTCCTGGATCATGGTCATGGTGGTGGTGGTGGTGGTG
GT---------CCGGCGGCCGTACCTGCTTCCACAACCAAGAAGCCGCCTCCCCGAGACGCTCCAACCGTCACCGTCCGT
CCCCCTAATCTTCTGCGACGAGATGATGATCATCAAGAGGAGGGGGGCGCCCGCAGCAGCAGCAACAACAACAACCTTGC
CACCCTCGTCGATGAGATTGTTGCAGAATCAGGTACCTAGTTACACAAATCTTCATCTATCCATCCATGTACATACATAA
ATAAATGCCTGCCCTTAAGAAACATATCACAATATTTGTATGATATTACATTTTGTTTTCTTATTAAGGCAAACCTCTGA
CCAACAAGTAATAATCCTTTAAATTTGTGATGATGTGATCACCTCCTTTTTTTTGTCTACCTTTGATGAGACCAACAAAA
TATGAGTTATACTATGCCACAAAGAGTATGTATATATACCATTTGATTTGCACTTTTAAAGAAATTTGCACTGATGTACA
ACCTCTGTACCAAAATATAAGATGTTTTTTTGGTTTTGGAGAGGGTATAAAAAACTGACTTGCATTTTGTTACGGAGAGA
GTATACTTTTTTATGCCCTGTTGTATTGGTAAAATTGATGGTCAAAGTGAGATTCAAAATACAAGATGACCTTGTTGTTT
GTATAAATGGATGAGTGACTGAAATGAATTTGCAATGTGGTATTGAATTGCAGCGACGCACCAGCACAACCGGCGGGTGG
CTGACGAGATCCTGGGGATGAACAAGGAGGAGGCGGCGGTGACGGCGCGCGCATTCACATTCGCCGAGCTCTCGGAGGCC
AGCGGCGGGTTCCTGGTGGAGTCGATGCTGGGCGAGGGCGGGTTCGGGCCCGTGTACCGCGGGCGGCTGAGGGACGGCAC
GGAGGTGGCGGTGAAGCAGCTGGACCGCAACGGGCTGCAGGGCACGCGCGAGTTCCTGGTGGAGGTGCTCATGCTCAGCC
TCCTCAAGCACCCCCACCTCGTCACCCTCATCGGCTACTGCGCCGACGCCAGCCACCGCATGCTCGTCTACGAGTTCATG
CCCCAAGGCTCCCTCGAGGACCACCTCCTGGACCTGC------------------------------CGCCCTCCTCCCC
GGGCCTCGACTGGGCCATGCGCATGCGCATCGCGCAGGGCGCCGCCCGGGGCCTCGAGTACCTCCACGACGCCTCCCGCC
GCCCCGGCCCGCCCGTCATCTACCGCGACTTCAAGGCCTCCAACATCCTCCTCGACGGCTGCTTCCGCGCGCACCTCTCC
GACTTTGGCCTCGCCAAG------------------------GTCGGCCCCGTCGGCGACAAGACCCATGTGTCCACCAG
GGTCATGGGCACCTACGGCTACTGCGCCCCCGAGTACGCGCTCACCGGGAAGCTCACCACCATGTCCGACGTCTATAGCT
TCGGCGTCGTCTTCCTCGAGATCATCACGGGGCGGCGCGTCATCGACACGTCCAGGCCCCGTGATGAGCACAACCTTGTG
CAGTGGGCGGCGCCGCGCTTCAAGAGCAAGAAGCGCTTCAGGGAGATGGCCGACCCGCTCCTCCGCGGCGCATACCCCAC
CAAGGGGCTCTACCAGGCGCTCGCCATCTCCGCCATGTGCCTCCAGGAGGATGCCACCATGCGCCCCTCCATCGCCGACG
TTGTCATGGCGCTCGACTACCTCACCGGCGTCGCCAAGCCTTCCCCTACCCCTACC------------------------
------------CCTCAACAACAGTCGCCTTCCCCTAGCCCTAGCCCTACCCCTACCCCTCAACAACAGTCGCCGCCCAA
GGAGGAGGA---TGATGCCACTGACTAG----------------------------------------------------
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>chr4D_1_TraesCS4D01G000300
ATGCATCTGTCGTTTTGGGTCATCGGCGGCGATCCGTGTCATGCACGTTCCCTGTCACCGGCCCACGGGGTTCAGGAGTG
TTTCAGATCGAGGCCATCCGGAACGGAGGTTAGTCAACAGCTACTTGCTCGTGTCTTTCTTTCTTGACACTCATACATAG
ATAGATATAT--GGCTGCCTCCTGGATTTCCTTCAGTATATATATATCCTGTTGATGTCTGCTTTATCTTGTCTTGCGTT
ACTTGTGCATAAAGAGGATGGTGTGCTTTCCTTTCTGCGCCACCACGACTGGGAGATACTGGCCATGGATGCTCGCCTGG
AACTGCAGCTGGA---------ACTACCTTCAGATGATGGCGGTCAGGGTCAGCAACCAGTCGTGATGAACCTAAACCTG
ATGAGCAGCACTGCTGCTGCTGATGACGACGACAACTGTAAGATTAGTGGTACTGGTGGTGGTGAGGAAATCAGTTGAGG
GTTGAGCCTTTTTCC---------------TTTCTTTTCTTGTCGTTGCGACAAGAGGAGGAGAG---AGTTGACAAGAA
AGAATATTCATAGAGATTTGGTTTGATGGAGATGGCAATAATTG------------------------------------
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-------------------------------------------AATTGAATTGAGCATCACTTCACTCACTTGCTTTGAT
GTATGAATCCTATCCTATCCTTTCCTATGTGCATCTTATCCTGAAACAAGAAGCAAGCTAGCTAGGGATAGATAGATAGA
TAGAAAGAAATGTAG-TAGTAACTAAAATTAGGAGGGGGGCATGCATGCATGCACTTGGTGCTTAGGCCTGCCAGCCGGG
CAAACCATCAACCCTACGTTTGTTTAGCTTAGCATGTGGGTGGCATGGCATGGCAT---------------GGATTCCGG
CGGGCCGGTCAATGACCTTGCTCGTCGTGTCGATTGGGATTGGATCGAAGAATCGAATCAAAATGGATTGGATTGAATGC
TTGGGCAAATTCTTTCTATGTATCGTTAGGTAGTAGAATAGAATTTGCTCAAGCATTCACCACCTAGCAAGGAAGGAAGG
AAGGATGGGCATCTTGTGTTGCTTCCAGTCCGGCGCCGACAAGCTCCTGGATCATGGTCATGGTGGTGGTGGTGGTGGTG
GT---------CCGGCGGCCGTACCTGCTTCCACAACCAAGAAGCCGCCTCCCCGAGACGCTCCAACCGTCACCGTCCGT
CCCCCTAATCTTCTGCGACGAGATGATGATCATCAAGAGGAGGGGGGCGCCCGCAGCAGCAGCAACAACAACAACCTTGC
CACCCTCGTCGATGAGATTGTTGCAGAATCAGGTACCTAGTTACACAAATCTTCATCTATCCATCCATGTACATACATAA
ATAAATGCCTGCCCTTAAGAAACATATCACAATATTTGTATGATATTACATTTTGTTTTCTTATTAAGGCAAACCTCTGA
CCAACAAGTAATAATCCTTTAAATTTGTGATGATGTGATCACCTCCTTTTTTTTGTCTACCTTTGATGAGACCAACAAAA
TATGAGTTATACTATGCCACAAAGAGTATGTATATATACCATTTGATTTGCACTTTTAAAGAAATTTGCACTGATGTACA
ACCTCTGTACCAAAATATAAGATGTTTTTTTGGTTTTGGAGAGGGTATAAAAAACTGACTTGCATTTTGTTACGGAGAGA
GTATACTTTTTTATGCCCTGTTGTATTGGTAAAATTGATGGTCAAAGTGAGATTCAAAATACAAGATGACCTTGTTGTTT
GTATAAATGGATGAGTGACTGAAATGAATTTGCAATGTGGTATTGAATTGCAGCGACGCACCAGCACAACCGGCGGGTGG
CTGACGAGATCCTGGGGATGAACAAGGAGGAGGCGGCGGTGACGGCGCGCGCATTCACATTCGCCGAGCTCTCGGAGGCC
AGCGGCGGGTTCCTGGTGGAGTCGATGCTGGGCGAGGGCGGGTTCGGGCCCGTGTACCGCGGGCGGCTGAGGGACGGCAC
GGAGGTGGCGGTGAAGCAGCTGGACCGCAACGGGCTGCAGGGCACGCGCGAGTTCCTGGTGGAGGTGCTCATGCTCAGCC
TCCTCAAGCACCCCCACCTCGTCACCCTCATCGGCTACTGCGCCGACGCCAGCCACCGCATGCTCGTCTACGAGTTCATG
CCCCAAGGCTCCCTCGAGGACCACCTCCTGGACCTGC------------------------------CGCCCTCCTCCCC
GGGCCTCGACTGGGCCATGCGCATGCGCATCGCGCAGGGCGCCGCCCGGGGCCTCGAGTACCTCCACGACGCCTCCCGCC
GCCCCGGCCCGCCCGTCATCTACCGCGACTTCAAGGCCTCCAACATCCTCCTCGACGGCTGCTTCCGCGCGCACCTCTCC
GACTTTGGCCTCGCCAAG------------------------GTCGGCCCCGTCGGCGACAAGACCCATGTGTCCACCAG
GGTCATGGGCACCTACGGCTACTGCGCCCCCGAGTACGCGCTCACCGGGAAGCTCACCACCATGTCCGACGTCTATAGCT
TCGGCGTCGTCTTCCTCGAGATCATCACGGGGCGGCGCGTCATCGACACGTCCAGGCCCCGTGATGAGCACAACCTTGTG
CAGTGGGCGGCGCCGCGCTTCAAGAGCAAGAAGCGCTTCAGGGAGATGGCCGACCCGCTCCTCCGCGGCGCATACCCCAC
CAAGGGGCTCTACCAGGCGCTCGCCATCTCCGCCATGTGCCTCCAGGAGGATGCCACCATGCGCCCCTCCATCGCCGACG
TTGTCATGGCGCTCGACTACCTCACCGGCGTCGCCAAGCCTTCCCCTACCCCTACC------------------------
------------CCTCAACAACAGTCGCCTTCCCCTAGCCCTAGCCCTACCCCTACCCCTCAACAACAGTCGCCGCCCAA
GGAGGAGGA---TGATGCCACTGACTAGTTATAAGTTATAACAACAAACATGCATATCTGTCTGTGCAACATGTATATAT
ATATATGCCAAGCAAGTCTTCCTGTTATCTCATGGATTA-TTTCTCTGCAAGTAACCTAACCTGGTTTGTGCATGCCCGT
CCGTCCATATTAGGATAATAAGATTTATTTATTTATTTCCTGCTGCTAGAACAACAATTGACACCAAATCTACAACTTGC
CATGGGCACAAAG--CAACAAACAAAAGAGCTAGCACAACAATC-----------AACTTAGGCAGCATT------CTTT
TGTAGTAAACACTATCAGATTTCATGCC--------AAAAAAACTG--------ACCCAACAAAAACTTGACAAGAAAAG
CTGAAAACAGTGTTTCAGT---------------TAAACTAAAAAATCTAAAGGTTCACCACTCA---------------
---------------ATTCATATAGACAGATAAAAAGCTTTCTCTCAAAGCTGC--------------------------
TCCTAACCAACAGGAACAGAGTATTGTGTTTTATCCAACCGACCGACCGACCTAATCAGTAAATCTTCACTCGTGACAAA
GTTGCGCTGCCTCCCTAGCAATCTATCTATCCAGTCTAGCTATTCATTCCTCTCCTCCCTAACAGAAGAGAAAAAGAAA-
-AAAAGAGAAGATTCCCCACTCAATAGTCAATACTCTACTTGTGGTGCTCAAAGGTGCCGAGGTCGCTCACGGATGGCAT
CCCAAGGGACAAATCAGCCTC---TTCTGCCCGCTT------------GCTGGGGCCGGGGCT------TCCCAGCGTCA
GTTTCTGCTTGTACGTGTGGTTGTATATCTGGAGCGCCTGAGCAATCATTGTCCCCGGATTGCCTGCGTCGCTGGGAAGA
AGCATCGTGTTCGTCTGCAGTTTGGCAAAAAGACACATGC-ATCACTAAGTACAATGAAATTTCATATCAGCTAAGCTAG
CAATCGCCAAGAGTCGTGTATATACTATAATTATTAAGATTCAACAACTCACACTTCTAGCCAGTTCACTGAATGCTCTG
ATGTAC--------------------------------------------------------------------------
---------TGTTCAGCAATCCTCAAGCTGGCAGCCTGCACA
>chr4B_1
ATGCATCTGTCGTTTTGGGTCATCGGCGCCGATCCGTGTCGTGCACGTTCCCGGTCACAGGGCCACGGGGTTCGGGAGTC
TTTCAGATCGAGGCCGTCCGGAATGGAGGTTTGTCGACAGCTAC------------TTCTTTCTTGACACTCATACATAG
ATAGATATATATGGCTGCCTCCTGGATTTCCTTCAGTACGTAGTTTTCTTATA-ATGTCTGCTTTATCTTGTCTTGTGTT
ACTTGTGCGCAAAGAGGATGGTGTGTTTTCATTTCTGCGCCACCACGACTGGGAGATATTGGCCATGGATGCTCGCCTGG
AACTGCAGGTGGAAGCTGCAGCATTACCTTCAGATGATGGCGGTCAGGGTCAGCAACCAGTTGTGATGAACCTAAACCTG
ATGAGCAGCGCTG---CTGCTGATGACGACGACAACTGTAAGATTAGTGGTACTGGCGGTGGTGAGGAAATCAGTTGAGA
GTTGAGCCTTTTTCTTTTCTGTTCTTTTCTTTTCTTTTCTTGTCGTCGCGACAA---GAGGAGAG---AGTTGACAAGAA
AGAATAT----AGAATTTTGGTTTGATGGAGATGGCAATAATC-------------------------------------
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-------------------------------------------AATTGAATTGAGCATCACTTCACTCACTTGCTTTGAT
GTATGA-----ATCCTATCCTATCCTATGTGCATCTTATCCTGAAACAAGA----AGCAAGCTAGGGATAGATAGATAGA
TAGAAAGAAATGC----AGTAACTAAAATTAGGAGGGGGGCATGC---------------------------CAGCCGGG
CAAACCATCAACCCTCCGTTTGTTTAGCTTAGCATGTGGGTGGCATGGCATGGCATGGCACGGCATGGCATGGATTCCGG
TGGGCCGGCCAATGACCTTGCCCGTCGTGTCGATTGGGATTGGATCGAAGAATCGAATCAAATTGGATTGGATTGAATGC
TTGGGCAAATTCTTTCTATGTATCGTTAGGTAGTAGAATAGAATTTGCTCAAGCATTCACCACCTAGCAAGCAAGCAAGG
AAGGATGGGCATCTTGTGTTGCTTCCAGTCCGGCGCCGACAAGCTCCTGGATCATGGTCATGGTGGTGGTGGTGGT----
-----------CCGGCGGCCGTACCTTCTTCCACAACCAAGAAGCCGCCTCCCCGAGACGCTCCAGCCGTCACCGTCCGC
CCCCCTAATCTGCTGCGACGAGATGACGATCATCAAGAGGAGGAGGGCGCCCGCAGCAGCAGCAACAACAACAACCTTGC
CACCCTCGTCGATGAGATTGTTGCAGAATCAGGTACCTACAT---------------------------TACATACATAA
TGATATATAGATAGGTGAGGTGAAATAAGAGACACTGAG-----------------------------------------
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---------------------------ATTTGCAATGTGG---------GCAGCGACGCACCAGCACAACCGGCGGGTGG
CTGACGAGATCCTGGGGATGAACAAGGAGGAGGCGGCGGTGACGGCGCGCGCATTCACATTCGCCGAGCTCTCGGAGGCC
AGCGGCGGGTTCCGGGTGGACTCGATGCTGGGCGAGGGCGGGTTCGGGCCGGTGTACCGTGGGCGGCTGCGGGACGGCAC
GGAGGTGGCGGTGAAGCAGCTGGACCGCAACGGGCTGCAGGGCACGCGCGAGTTCCTGGTGGAGGTGCTCATGCTCAGCC
TCCTCAAGCACCCCCACCTCGTCACCCTCATCGGCTACTGCGCCGACGCCAACCACCGCATGCTCGTCTACGAGTTCATG
CCCCAGGGCTCCCTCGAGGACCACCTCCTGGACCTGC------------------------------CGCCGTCGTCCCG
GGGGCTCGACTGGGCCATGCGCATGCGCATCGCGCAGGGCGCCGCCCGGGGCCTCGAGTACCTCCACGACGCCTCCCGCC
GCCCCGGCCCGCCCGTCATCTACCGCGACTTCAAGGCCTCCAACATCCTCCTCGACGGCTGCTTCCGCGCGCACCTCTCC
GACTTTGGCCTTGCCAAG------------------------GTCGGCCCCGTCGGCGACAAGACCCATGTCTCCACCAG
GGTCATGGGCACCTACGGCTACTGCGCCCCCGAGTACGCGCTCACGGGCAAGCTCACCACCATGTCCGACGTCTATAGCT
TCGGCGTCGTCTTCCTCGAGATCATCACGGGGCGGCGCGTCATCGACACGTCCAGGCCCCGTGATGAGCACAACCTTGTG
CAGTGGGCGGCACCGCGCTTCAAGAGCAAGAAGCGCTTCAGGGAGATGGCCGACCCGCTCCTCCGCGGCGCATACCCAAC
CAAGGGGCTCTACCAGGCGCTCGCCATCTCCGCCATGTGTCTGCAGGAGGATGCCACCATGCGCCCCTCCATCGCCGACG
TTGTCACGGCGCTCGACTACCTCACCGGCGTCGCCAAGCCTTCCCCTCCCTCTCAACAACAGTCGCCTTCCCCTAGCCCT
AGCCCTACCCATCCTCAACAACAGTCGCCTTCCCCTAGCCCTAGCCCTACCCAT---CGTCAACAACAGTCGCCGCCCAA
GGAGGAGGA---TGATGCCACTGACTAGCTAT------TAACAACAAACATGCATATCTGTCCGTGCAACATGTATAC--
ATATATGCAAAGCAAGTCTTGTTGTTATCTGAGGGATTATTTTCTCTACAAGTAACCTAACCTGGTTTGTGCATGCCCGC
CCGTCCG---TAGGATAATAAGATTTATTTATTT----CCTGCTGCTACAACAACAATTGACAACAAACAAAAGAGCCAG
CACAACAACAATTGACAACAAACAAAAGAGCCAGCACAACATTAACAATCAACTTAACTTAGGCAGCATT------CTTT
TGTAGTAAAATCTATCAGATTTCATGCCCCCCCAAAAAAAAAACTGTA--------GCAACAAAAACTTGACAAGAAAAG
CTGAAAACATCGTTGCACCAAAAC-------TAATAAAATAAAATATCTCATGCAACATATT-CAAAGGTTGTGCGTGTA
ACACCACTCAACTCAATTCATATAGAGAGACAAAAAGCTTGCTCTCAAAGCTGC--------------------------
TCCTA---------------------------------------------GCAAATCAGTAAATCTTCTCTCGTGACAAA
GTTGCACTTCCTCCCTAGCAATCTATCTACCCAGTCTAGCTATTCATTCCTCTCCTTCCTAACAGAAAAGAAAAGAAAA-
-GAAAAGAAAAGAAAAAAGAAGATACTCT----CTCTACTTGTGGTGCTCAAAGGTGCCGAGGTCGCTCACGGATGGCAT
CCCAAGGGACAAATCAGCCTCCTCTTCTGCCCGCTT------------GCTGGGGCTGGGGCTGGGGCTTCCCAGCGTCA
GTTTCTGCTTGTACGTGTGGTTGTATATCTGGAGCGCCTGGGCAATCATTGTCCCCGGGTTGCCTGCGTCGCTGGGAAGA
AGCATCGTGTTCGTCTGCAGTTTGGCAAAAC-ACACACGC-ATCAGTAAGTACAATGAAATTTCATATCAGC-----TAG
CAAACGCCAAGAGTCGTGTATATACTATAATTATTAAGATTCAACAACTCACACTTCTAGCCAGTTCACTGAATGCTCTG
ATGTAC--------------------------------------------------------------------------
---------TGTTCAGCAATCCTCAAGCTGGCAGCCTGCA--
>chr4A_1
ATGCATCTGTCGTTTTGGGTCATCGGCGCCGATCCGTGGCGTGCACGTTCCCGGTCACAGGGCCACGGGGTTCGGGAGTG
TTTCAGATCGAGGCCGTCCGGAATGGAGGTTTGTCAACAGCTAC------------TTCTTTCTTGACACTCATACATAG
ATAGATA-----------CTCGTGGATTTCCTTCAGTACCTAGTTTTCTTATA-ATGTCTGCTTTATCTTGTCTTGTGTT
ACTTGTGCATAAAGAGGATGGTGTGCTTTCGTTTCTGCGCCACCACGACTGGGAGATACTGGCCATGGATGCTCGCCTGG
AACTGCAGCTAGA------AGCACTACCTTCAGATGATGGCAGTCAGGGTCAGCAACCAGTCGTGATGAACCTAAACCTG
ATGAGCAGCACTT---CTGCTGATGACGACGACAATTGTAAGATTAGTGATACTGCTGGTGGTGGGGAAATCAGTTGAGA
GTTGAGCCTTTC--------------TTCTTTTCTTTTCTTGTCGTTGCGACAA---GAGGAGGAGATAGTTGACAAGAA
AGAATATTCATAGAAATTTGGTTTGATGGAGATGGCAATAATTGAAAGGGTTTAGGCTTAGTAGAACTAAAACCGAGTAC
ATGATGTGCGGTTTCAGTACTACTAGCTGTGAGGAGGAGGAGGTTAGCCTTGATGGCCAGGTGGTACCTCGGAAGGACAC
CTTTCGGTATTTGGGGTCAATGTTGCAGGAGGATGGGGGTATTGATGAAGATGTGAACCATCGAATTAAAGCCGGATGGA
TGAAGTGGCGCCAAGCTTCTGGCATTCTCTGTGACAAGAGAGTGCCACAAAAGCTAAAAGGCAAGTTCTACAGGACGGCG
GTTCGACCCGCAATGTTGTATGGCGCGGAGTGTTGGCCGACTAAAAGGCGACATGTTCACAGTTAGGTGTGGCGGAGATG
CGTATGTTGAGATGGATGTGTGGCCACACGAGGAAGGATCGAGTCCGGAATGATGATATACGAGATAGAGTTGGGGTAGC
ACCAATTGAGGAGAAGCTTGTCCAACATCGTTTGAGATGGTTTGGGCATATTCAGCGCAGGCCTCCAGAAGCTCCAGTGC
ATAGCGGACGGCTAAAGCGTGCGGAGAATGTTAAGAGAGGGCGGGGTCGACCGATTTTGACATGGGAGGAGTCCGTTAAG
AGAGACCTGAAGGATTGGAGTATCGACAAAGAGCTAGCTATGGACAGGGGTGCGTGGAAGCTTGCTATCCATGTGCCAGA
GCCATGAGTTGGTTGCGAGATCTTATGGGTTTCACCTCTAGCCTATCCCAACTTGTTTGGGATTAAAGGCTTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTTGGAGATGGCAATAATTGAATTGAATTGAGTTGAGCATCACTTCACTCACTTGCTTTGAT
GTCTGAATCCTATCCTATCCTATCCTATGTGC--------CTGAAACAAGA----AGCAAGCTAGGGATAGATAGATAGA
TAGAAAGAAATGTACCTAGTAACTAAAATTAGGAGGGGGGCATGCATGCATGCACTTGGTGCTTAGGCCTGCCAGCCGGG
CAAACCATCAACCCTACGTTTGTTTAGCTTAGCATGTGGGTGGCATGGCATGGCAT---------------GGATTCCGG
CGGGCC-GCCAATGACCTTGCTCATCGTGTCGATTGGGATTGGATCGAAGAATCGAAACAAAATGGATTGGATTGAATGC
TTGGGCAAATTCTTTCTATGTATCGTTAGGTAGTAGAATAGAATTTGCTCAAGCATTCACCACCTAGCAAGG----AAGG
AAGGATGGGCATCTTGTGTTGCTTCCAGTCCGGCGCCGACAAGCTCCTGGATCATGGTCATGGTGGTGGTGGTGGTGGTG
GTGGTGGTGGTCCGGCGGCCGTACCTTCTTCCACAACCAAGAAGCCGCCTCCCCGAGACGCTCCAGCCGTCACCGTCCGC
CCCCCTAATCTGCTGCGACGAGATGACGATCATCAAGAGGAGGAGGGCGCCCGCAGCAGCAGCAACAACAACAACCTTGC
CACCCTCGTCGATGAGATTGTTGCAGAATCAGGTACCTACAT---------------------------TACATACATAA
TGATATATAGATAGGTGAGGTGAAATAAGAGACACTGAG-----------------------------------------
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---------------------------ATTTGCAATGTGG---------GCAGCGACGCACCAGCACAACCGGCGGGTGG
CTGACGAGATCCTGGGGATGAACAAGGAGGAGGCGGCGGTGACGGCGCGCGCATTCACATTCGCCGAGCTCTCGGAGGCC
AGCGGCGGGTTCCGGGTGGACTCGATGCTGGGCGAGGGCGGGTTCGGGCCGGTGTACCGTGGGCGGCTGCGGGACGGCAC
GGAGGTGGCGGTGAAGCAGCTGGACCGCAACGGGCTGCAGGGCACGCGCGAGTTCCTGGTGGAGGTGCTCATGCTCAGCC
TCCTCAAGCACCCCCAACTCGTCACCCTCATCGGCTACTGCGCCGACGCCAACCACCGCATGCTCGTCTACGAGTTCATG
CCCCAGGGCTCCCTCGAGGACCACCTCCTGGACCTGC------------------------------CGCCGTCGTCCCG
GGGGCTCGACTGGGCCATGCGCATGCGCATCGCGCAGGGCGCCGCCCGGGGCCTTGAGTACCTCCACGACGCCTCCCGCC
GCCCCGGCCCGCCCGTCATCTACCGCGACTTCAAGGCCTCCAACATCCTCCTCGACGGCTGCTTCCGCGCGCACCTCTCC
GACTTTGGCCTCGCCAAG------------------------GTCGGCCCCGTCGGCGACAAGACCCATGTCTCCACCAG
GGTCATGGGCACCTACGGCTACTGCGCCCCCGAGTACGCGCTCACGGGCAAGCTCACCACCATGTCCGACGTCTATAGCT
TCGGCGTCGTCTTCCTCGAGATCATCACGGGGCGGCGCGTCATCGACACGTCCAGGCCCCGTGATGAGCACAACCTTGTG
CAGTGGGCGGCACCGCGCTTCAAGAGCAAGAAGCGCTTCAGGGAGATGGCCGACCCGCTCCTCCGCGGCGCATACCCAAC
CAAGGGGCTCTACCAGGCGCTCGCCATCTCCGCCATGTGTCTGCAGGAGGATGCCACCATGCGCCCCTCCATCGCCGACG
TTGTCACGGCGCTCGACTACCTCACCGGCGTCGCCAAGCCTTCCCCTCCCTCTCAACAACAGTCGCCTTCCCCTAGCCCT
AGCCCTACCCATCCTCAACAACAGTCGCCTTCCCCTAGCCCTAGCCCTACCCAT---CCTCAACAACAGTCGCCGCCCAA
GGAGGAGGAGGATGATGCCACTGACTAGCTAT------TAACAACAAACATGCATATCTGTCCGTGCAACATGTATAC--
ATATATGCAAAGCAAGTCTTGTTGTTATCTGAGGGATTATTTTCTCTACAAGTAACCTAACCTGGTTTGTGCATGCCCGC
CCGTCCG---TAGGATAATAAGATTTATTTATTT----CCTGCTGCTACAACAACAATTGACAACAAACAAAAGAGCCAG
CACAACAACAATTGACAACAAACAAAAGAGCCAGCACAACATTAACAATCAACTTAACTTAGGCAGCATT------CTTT
TGTAGTAAAATCTATCAGATTTCATGCCCCCCC--AAAAAAAACTGTA--------GCAACAAAAACTTGACAAGAAAAG
CTGAAAACATCGTTGCACCAAAAC-------TAATAAAATA-----TCTCATGCAACATATT-CAAAGGTTGTGCGTGTA
ACACCACTCAACTCAATTCATATAGAGAGACAAAAAGCTTGCTCTCAAAGCTGC--------------------------
TCCTA---------------------------------------------GCAAATCAGTAAATCTTCTCTCGTGACAAA
GTTGCACTTCCTCCCTAGCAATCTATCTATCCAGTCTAGCTATTCATTCCTCTCCTTCCTAACAGAAAAGAAAAGAAA--
----------AGAAAAAAGAAGATACTCT----CTCTACTTGTGGTGCTCAAAGGTGCCGAGGTCGCTCACGGATGGCAT
CCCAAGGGACAAATCAGCCTCCTCTTCTGCCCGCTT------------GCTGGGGCTGGGGCTGGGGCTTCCCAGCGTCA
GTTTCTGCTTGTACGTGTGGTTGTATATCTGGAGCGCCTGGGCAATCATTGTCCCCGGGTTGCCTGCGTCGCTGGGAAGA
AGCATCGTGTTCGTCTGCAGTTTGGCAAAAC-ACACACGC-ATCAGTAAGTACAATGAAATTTCATATCAGC-----TAG
CAAACGCCAAGAGTCGTGTATATACTATAATTATTAAGATTCAACAACTCACACTTCTAGCCAGTTCACTGAATGCTCTG
ATGTAC--------------------------------------------------------------------------
---------TGTTCAGCAATCCTCAAGCTGGCAGCCTGCA--
>chr3D_1893
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-------------------------TGCTGGGCGAGGGCGGCTTCGGCCGCGTCTACCGGGGGCGCCTGGACGACGGCCA
GCTGGTGGCGGTGAAGCAGCTGGACCTGGAGGGCCTGCAGGGCGACCGCGAGTTCGTGGTGGAGGTGCTCATGCTCAGCC
TCCTCCACCACGACAACCTCGTCAGCCTCGTCGGCTACTGCTCCCACGGCCACCAGCGCTTGCTCGTCTACGAGTACATG
GCCCTCGGCTCCCTCGCCGACCACCTCCTCCTCCTCGACGACCGCCTCGCCACC------CCGAGGGCGACGGCCAGGGC
GGCGCTCAGCTGGGAGACGCGGATGCGGGTGGCGCTGGGCGCCGCGAGGGGGCTCGAGTACCTCCACGAGACGGCCAACC
CGG---------CCGTCATCTACCGCGACCTCAAGTCCTCCAACGTCCTCCTCGACGACGCCTTCTGCCCCAAGCTCTCC
GACTTCGGCCTCGCCCGCCTCTGCAGCACCTCCTCCTCCGCCGCCGGCCCCGGCCCCGCCGAGCGCTCCCCGCGC-----
-GTCATGGGCACCTACGGCTACTGCGCGCCCGAGTACATCCGCACCGGCCGCCTCAGCGTCAAGTCCGACGTCTACAGCT
TCGGCGTGCTCCTCCTCGAGCTCATCACGGGCCGCCGGGCGGTGGACTCGGCGCGCCCGGCGCCGGAGCAGGTGCTCGTC
ACATGGGCCGCGCCCATGTTCAAGGACAGCAAGCGCTACCGCGAGCTGGCCGACCCGCTGCTCCGCGGCGACTTCCCCGA
GCGCGACCTCAACCAGGCCGTCGCCGTGGCCGCCATGTGCCTGCAGGA--------------------------------
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>chr3A_1893
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-------------------------TGCTGGGCGAGGGCGGCTTCGGCCGCGTCTACCGGGGGCGCCTGGACGGCGGCCA
GCTGGTGGCGGTGAAGCAGCTGGACCTGGAGGGCCTGCAGGGCGACCGCGAGTTCGTGGTGGAGGTGCTCATGCTCAGCC
TCCTCCACCACCACAACCTCGTCAGCCTCGTCGGCTACTGCTCCCACGGCCACCAGCGGCTGCTCGTCTACGAGTACATG
GCCCTCGGCTCCCTCGCCGACCACCTCCTCCTCCTCGACGACCGCCTCGCCACCGCCACTCCCAGGGCGACGGCGAGGGC
GGCGCTGAGCTGGGAGACGCGGATGCGGGTGGCGCTGGGCGCCGCGAGGGGGCTCGAGTACCTCCACGAGACGGCCAACC
CGG---------CCGTCATCTACCGCGACCTCAAGTCCTCCAACGTCCTCCTCGACGACGCCTTCTGCCCCAAGCTCTCC
GACTTCGGCCTCGCCCGCCTCTGCAGCACCTCCTCCTCCGCCGCCGGCCCCGGCCCCGCCGAGCGCTCCCCGCGC-----
-GTCATGGGCACCTACGGCTACTGCGCGCCCGAGTACATCCGCACCGGCCGCCTCAGCGTCAAGTCCGACGTCTACAGCT
TCGGCGTCCTCCTGCTCGAGCTCATCACGGGCCGCAGGGCTGTGGACTCGGCCAGGCCGGCGCCGGAGCAGGTGCTCGTC
ACATGGGCCGCGCCCATGTTCAAGGACAGCAAGCGCTACCGGGAGCTGGCCGACCCGCTGCTCCGGGGCGACTTCCCCGA
GCGCGACCTCAACCAGGCCGTGGCCGTGGCCGCCATGTGCCTGCAGGA--------------------------------
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>chr5D_3053
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-------------------------------------------------------------------------------C
CATGGGCTCAAAG--CAACAAACAAAAGAGCTTGCACAAC------------------TTAGGCAGCAGATTTCACCTTC
TTTTGTAAAATCTGTCAGATTTCATTT-------AAAAAAAAACTGTACGGTTTACGCAACAAAAACTTGAGAAGAAAAG
CTGAAAGCATTGTTGCACTAAACCCGGTTGATATAAAACTAAAAAATCGCATGTAATAACACCCACCC------------
---------------ATTCATATAGACAGACAAAAAGTTTGCTCTCAAGCTGCTCCTAACCAACCAAGTATTGTGTTTTA
TCCGA---------------------------------------------CCGAATCAGCAAAACTTCACTCGTGA----
--------TCCTTCCTACCAATCTATCTATCCAGTCTAGCTACTCATTCCTC-----CCTCACAG------AAAAGGAA-
-AAAAAAGAAGATTCCCCACTCAATA-------CTTTACTTCTGGTGCTGAAAGGTGCCGAGGTCGCTCACGGATGGCAT
CCCAAGGGACAAATCAG---CCTCTTCTGCCCGCTT------------GCTGGGGCTGGGGCT------TCCCAGAGTCA
GTTTCTGCTTGTACGTGTGGTTGTATATCTGGAGGGCCTGAGCAATCATTGTCCCCGGATTGCCTGCGTCGCTGGGAAGA
AGCATCGTGTTCGTCTGCAGTTTGGCAAAAC-ACACATGC-ATC----AGTACAATGAAAATTCATATCAGC-----TAG
CAAACGCCAAGAGTCGTGTATATA-----ATTATTAAGATTCAACAACTCACTGTTCTAGCTAGTTCACTGAATGCTCTG
ATGTAC--------------------------------------------------------------------------
---------TGTTCAGCAATCCTCAAGCTGGCAGCCT-----
>chr4A_3067
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---------------CAACAAACAAAAGAGCTTGCACAAC------------------TTAGGCAGCAGATTTCACCTTC
TTTTGTAAAATCTGTCAGATTTCATGCC--------AAAAAAACTGTACAGTTTACGCAACAAAAACTTGAAAAGAAAAG
CTGAAAATATTGTTGCACCAAAACCGGTTGATATAAACCTAAAAAATCTCATGTAATAACAT-CACCC------------
---------------GTTCATATAGACAGACAAAAAGCTTGCTCTCAAGCTGCTCCTAACCGACCATGTATTGTGTTCTA
TCTGA---------------------------------------------CCGAATCAGAAAAACTTCACTCGCGA----
--------TCCTTCCTAGCAATCTATCTATCCAGTCTAGCTATTCATCCCTC-----CCTAACAG------AATAGAAAA
AAA-----AAGATTCCCCACTCAATA-------CTTTACTTCTGGTGCTGAAAGGTGCCGAGGTCGCTCACGGATGGCAT
CCCAAGGGACAAATCAG---CCTCTTCTGCCCGCCTGCTGGGGCTGGGGCTGGGGCTGGGGCT------TCCCAGAGTCA
GTTTCTGCTTGTACGTGTGGTTGTATATCTGGAGAGCCTGAGCAATCATTGTTCCCGGATTGCCTGCGTCGCTGGGAAGA
AGCATTGTGTTTGTCTGCAGTTTGGCAAAAC-ACACATGCAATC----AGTACAATGAAAATTCATATCAGC-----TAG
CAAACGCCAAGAGTCGTGTATATA-----ATTATTAAGATTCAACCACTCACAGTTCTAGCCAGTTCACTGAATGCTCTG
ATGTACTCCCTCCGTAAATTAATATAAGAGCGTTTAGATCACTATTTTAGTGTTCTAAATGCTCTTATATTAGTTTACAG
AGGGAGTACTGTTCAGCAATCCTCAAGCTGGCAGCCT-----
>chr5B_3229
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---------------ATTCATATAGACAGACCAAAAGCTTGCTCTCAAGCTGCTCCTAACCGACCAAGTATTGTGTTTTA
TCCGA---------------------------------------------CCGAATCAGCAAAACTTCACTCGTGA----
--------TCCTTCCTACCAATCTATCTATCCAGTCTAGCTATTCATTCCTC-----CCTAACAG------AAAAGGAAA
AAAAAAAGAAGAATCCCCACTCAATA-------CTTTACTTCTGGTGCTGAAAGGTGCCGAGGTCGCTCACGGATGGCAT
CCCAAGGGACAAATCAG---CCTCTTCTGCCCGCTT------------GCTGGGGCTGGGGCTGGGGCTTCCTAGAGTCA
GTTTCTGCTTGTACGTGTGGTTGTATATCTGGAGGGCCTGAGCAATCATTGTCCCCGGATTGCCTGCGTCGCTGGGAAGA
AGCATCGTGTTCGTCTGCAGTTTGGCAAAAC-ACACATGC-ATC----AGTACAACGAAAATTCATATCAGC-----TAG
CAAACGCCAAGAGTCGTGTATATA-----ATTATTAAGATTCAACAACTCACAGTTCTAGCCAGTTCACTGAATGCTCTG
ATGTAC--------------------------------------------------------------------------
---------TGTTCAGCAATCCTCAAGCTGGCAGCCT-----
>SNPs
----------------------------S-----------S-----------S-----S--S-----------S------
---------------S-------S-------S------------SSSSSSSSSSSS------------------------
--------------------------------------SS--SS-S--S-S-SS----------------------S---
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
-------------SSS---------------------------------------------------------------S
--------------S---------------------------------------SSS-----------------------
--------------S-----------------------------------------------------------------
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---------------------S-----------------------------SSSS---S---------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------S--------------------------------------S-------------S
-----------S--------------S----------------S------------------------------------
---------------------------------------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
SS-S--SSSSSSSSS-S--SSSS-SSSSSSS-S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-------------SSSSSSSSS-------------------------------
--------------------------------------------------------------------------------
-------------S------S--------------------------------------S---------S----------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
-----S-----------------------------------------------------------------S--------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
------S----------------------------------------S--S--SSS------------------------
----------------------------------------------------S-SSS-----------------------
----------------------------S---SSSSSS------------------------S--------------SSS
--------S-----------SS--------S-S--------------S-------------------------------S
------SSSS------------------------SSSS----------S--------------S----SSS-SS-SSSS-
-----------------------------------------S-S------------------------------------
---------SS---------------------------------------------S-----------------------
---------S----S--S-------------------------------S-S-SSS--S---S-----------------
------------------------------S---------S---------------------------------------
-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S---------------------------
-----S--S-----------------------------------------------S----------S------------
-----S--------------------SSSSSSS-----------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
------------------------------SS-------------S--------------------------SSSSS---
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------SS
>forward_96
----------------------------------------------------------------------------AGTG
TTTCAGATCGAGGCCA----------------------------------------------------------------
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>reverse_2601
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----------------------------------------TATTGAATTGCAGCGACGCA--------------------
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>forward_2246
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------------------------------------------------------------------AGGCAAACCTCTGA
CCAACA--------------------------------------------------------------------------
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>reverse_4360
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---------------------------------------CGACCGACCGACCTAATCAG---------------------
--------------------------------------------------------------------------------
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------------------------------------------
