>input_sequence_42461
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----------------------------------------------------------ATGTACGCCTCTCACACTCGCA
GGCTTCTTCGCCGCGACAGGGGAGCCCGTGCCCATGGCGGCGCCGCCAGGAGGCGCGCGTCGACGCCTCTGTTGTGCCTC
ATCGGCGCCATTCTCCTCGTCGCGATCTCTCGCCACACCCTGCTCCCCAAGGT---------ATCTCAGAAGCTGAATGC
CTGAATAATCCCATTCCCAACTGGTACTAGCCACTAGTGCGTGCAGGAAATCAGCGGCGCCAATGATTTTTTTCTGTAA-
TATGCCTCGATTGGCT-----------GTTGATCCTTCCCTAGGGTATCAATATTCAGTAGCATTGCAGATCCAGGCGCC
GAAGAACTGTGCTGCATTGGCTGACCGAACCATTCCCTAATTCCATGTCTTGATTTCATTCTTGCGAGAGAAGATGCCAT
TCCTGGGCTCCTTTTGGAGAGTTTCATTGGCACCTGGTGGTTACATTCCCACGCCCAAATCTCACGGTGTGAAGTATGAG
CTGCACACGCTCCCTGTAAGGCCCTCCCTGTTTTGGTGTCTCCT---GCATTGGCCACGAATGTATTATCACTCACAATT
TGTATGGTAGTTTCTTAGGTGGATGCAAAGGCTGTGGCTGACGGTGACACGATCACAGTGTATGTTGACACGGCTGACCC
TCGTGAGTCCGGCAACGTGCCCTGTGAAGTTCAGGAAGCCGCTGCAGAGCGAACCAAGGCGCGGGCGGCCAAGAACTATG
AGAAGGCTGACACGCTGCAGAAGATTATAGTGGATGCTGGATATAGGTAACTTCACATTAGG--ATAAAGCAACAATCTC
TTTGTGTGTGGTGTCGGCTACTGAAAGTCTGAAACTTCTGAAACATCTTCTGAATGCAGGCAAGTTCCTGGCTTGACAGG
GGAACAGGTTCTCGCGAAGAAGTACCGGGTCAGGCTAAGGTATGTCCCATATTTTGGTTGGTTGGTCCCAATTGATGATT
AAGGACTTTGTT----CTTGTTGGACCGCAGTTAAGATTTTATGGATTGAAATGAATGTAATACAGAGGGATTGATGCAC
CGGAGAACTCGATGCCTTATGGTAGAGAGGCGAAAGAGGAGCTAGTGAAGCTGGTGCAGGGAAGAACGTTAAAGATTTCC
ATATATGATACTGACCGGTATGGTCGATTAGTTGGAGATGTTGACTGCAATGGTGTGTTCGTGCAGGTAATATGTCATAC
TCTCTTATCATGCACATCAGAGTCACCTTTTGGAGGTCTGTTATGCTGGAAATAATCTATGCGAGTACCAAAATTACATT
TGCTCCATGTGCTGTTTGTCTTTC---TTAAAAGATCAGTAATCATGAAATTGCACATTTACAGTACATGAAACTGAATG
T------------------------------ATTAAAGACTTTGAAAACCCTTACAACTTTTACCGGAACATAAATCAGA
GCAACAAGCTTAAAATAGTACTATTAAATTCTGCAACAAACATGTTGTATTTCCTCGTTTGAAGATACGTA--------C
ATAC-TTATGGGATTGTTAACCGCTTTGCGAACTTTTGACTAAGAAACAAATAAGTTCTC--ATCTTGCTTTTGAAACAG
GAACACATGCTAAAGAAAGGTCTCACATGGCACTACACTGCCTACGATCAACGTCCAGAGCTTGCCGAGGTAAGCAGTGT
CACAACTAACAGCCTCAGT-TTTACTTGACTGAAGGGCAGTATAGCGCACTCTGAACAATTGTTCAACCTACC-------
----ATATGCACTTGAAAAGACCTTTACAGACTGAAACTTGTTCAGTGGGAGAAGCAGGCACAAGCGGGCGGGTTGGGCC
TGTGGGCGCTGCCTAACCCCGAGAAGCCATGGGAATGGAGGAAGGAGAAGCGCACGAGGAAATGGTGA------------
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----------------------------
>chr3D_1_TraesCS3D01G098100
AGAGTGATACTTTGAACCCGGGCCAGCGACAACAACCTTTGTGTCGTCTACCTTCATACCAAGGCCAACTTACCATTTCA
GGAATTTTTCATGGTCTGTTTAAAAAGAATCTTATATTCCCTTGCTCACGTTGTTGTGATCAAGAGATACTGTGTACCGT
AAATAAGAGTTGATTACACTTTCGACTATGTAGTCTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATAGAAATGATTCGTCATAATAGCTA
CGGTTTTATC-TCTTTCTTTCTCTCAGAGCTTGAGGATACATACATGAAT------------------------------
------------------------------GTCTATTGTAATTCCATGGGCCTCGCGATGGAATTTTGATTATAAGTAAT
TAATCTAATTGCAAGTAATTAATCTAACGGGGATGGAGGCTATGATAGTGAAAATGGCTATGGAAATGTGATTTCAATT-
----------------------TTTTTACAGGGTATGAAGATGTGAGGTTGATGATGGCTGCGACGGCCCGGTCCCAATA
TGGCTTTAGAAAGCGCGCAAGCCAACGTACACGACTATACGGCCCATGGGCTATGTCAGTACGTCCCACCACCCGCATCC
GACACGCCAGTTCGGCTGCACTG--AAA-AAAGAGCCCAGTTCCGCTCGAACGCGGCGCCGCCGCACTCGCACGCTGCTG
AGCT-----------CCCGGCGCCGGCGAGCCTCTCTTGCTGCCCCCCGCGCGGAGTGGGCGGCCTCGGCGTGCCGCAGG
CCCGGCTCCACGCGGCGTGGCGCCCGAGGGTGTTCCGCCAGTCCAAGTGCCCGGTGGTATGTACGCCTCTCACACTCGCA
GGCTTCTTCGCCGCGACAGGGGAGCCCGTGCCCATGGCGGCGCCGCCAGGAGGCGCGCGTCGACGCCTCTGTTGTGCCTC
ATCGGCGCCATTCTCCTCGTCGCGATCTCTCGCCACACCCTGCTCCCCAAGGT---------ATCTCAGAAGCTGAATGC
CTGAATAATCCCATTCCCAACTGGTACTAGCCACTAGTGCGTGCAGGAAATCAGCGGCGCCAATGATTTTTTTCTGTAA-
TATGCCTCGATTGGCT-----------GTTGATCCTTCCCTAGGGTATCAATATTCAGTAGCATTGCAGATCCAGGCGCC
GAAGAACTGTGCTGCATTGGCTGACCGAACCATTCCCTAATTCCATGTCTTGATTTCATTCTTGCGAGAGAAGATGCCAT
TCCTGGGCTCCTTTTGGAGAGTTTCATTGGCACCTGGTGGTTACATTCCCACGCCCAAATCTCACGGTGTGAAGTATGAG
CTGCACACGCTCCCTGTAAGGCCCTCCCTGTTTTGGTGTCTCCT---GCATTGGCCACGAATGTATTATCACTCACAATT
TGTATGGTAGTTTCTTAGGTGGATGCAAAGGCTGTGGCTGACGGTGACACGATCACAGTGTATGTTGACACGGCTGACCC
TCGTGAGTCCGGCAACGTGCCCTGTGAAGTTCAGGAAGCCGCTGCAGAGCGAACCAAGGCGCGGGCGGCCAAGAACTATG
AGAAGGCTGACACGCTGCAGAAGATTATAGTGGATGCTGGATATAGGTAACTTCACATTAGG--ATAAAGCAACAATCTC
TTTGTGTGTGGTGTCGGCTACTGAAAGTCTGAAACTTCTGAAACATCTTCTGAATGCAGGCAAGTTCCTGGCTTGACAGG
GGAACAGGTTCTCGCGAAGAAGTACCGGGTCAGGCTAAGGTATGTCCCATATTTTGGTTGGTTGGTCCCAATTGATGATT
AAGGACTTTGTT----CTTGTTGGACCGCAGTTAAGATTTTATGGATTGAAATGAATGTAATACAGAGGGATTGATGCAC
CGGAGAACTCGATGCCTTATGGTAGAGAGGCGAAAGAGGAGCTAGTGAAGCTGGTGCAGGGAAGAACGTTAAAGATTTCC
ATATATGATACTGACCGGTATGGTCGATTAGTTGGAGATGTTGACTGCAATGGTGTGTTCGTGCAGGTAATATGTCATAC
TCTCTTATCATGCACATCAGAGTCACCTTTTGGAGGTCTGTTATGCTGGAAATAATCTATGCGAGTACCAAAATTACATT
TGCTCCATGTGCTGTTTGTCTTTC---TTAAAAGATCAGTAATCATGAAATTGCACATTTACAGTACATGAAACTGAATG
T------------------------------ATTAAAGACTTTGAAAACCCTTACAACTTTTACCGGAACATAAATCAGA
GCAACAAGCTTAAAATAGTACTATTAAATTCTGCAACAAACATGTTGTATTTCCTCGTTTGAAGATACGTA--------C
ATAC-TTATGGGATTGTTAACCGCTTTGCGAACTTTTGACTAAGAAACAAATAAGTTCTC--ATCTTGCTTTTGAAACAG
GAACACATGCTAAAGAAAGGTCTCACATGGCACTACACTGCCTACGATCAACGTCCAGAGCTTGCCGAGGTAAGCAGTGT
CACAACTAACAGCCTCAGT-TTTACTTGACTGAAGGGCAGTATAGCGCACTCTGAACAATTGTTCAACCTACC-------
----ATATGCACTTGAAAAGACCTTTACAGACTGAAACTTGTTCAGTGGGAGAAGCAGGCACAAGCGGGCGGGTTGGGCC
TGTGGGCGCTGCCTAACCCCGAGAAGCCATGGGAATGGAGGAAGGAGAAGCGCACGAGGAAATGGTGAATCGTCCGTGAC
CAGGAAGAGTTTGTTTGATTCGCTCTCCTGAGATTCTTAGAGAAAACTAGCTTCAAACACTATAATATGTACAATGTACC
TCAACCCTTTCATGTTGTATTGTACTGTAACAGCTTGTGTAGAGTGAAAGCTCAAAGCAGGAAGCATCGATTGGTGTGGC
CCAATTAGGGACGCAGTTTCTTCTTCTTCTTTGCATTATTACCGTTGTAAACTTGTAACGATTGCTTGCTGTAAACTATG
ATGGAGTGGTGTCAATGAATGGATAATGCTATTTGATGTGTTGAATTCATGCATACTGCTCGTGCTCGTAGCTAGTGGCA
GAACCATCCATCAAGAATTGAGATTTGCCACGCAATACGACCCCAAGATTTCAAGCCAGACCGTGTGTGAACCAAAAAAA
GATAGATGTGCTGAACAATCAACGTGTGACTGAACCAAAGTGTGGTCTGCTCAAGGCGGGGCAAGACAATCAGCAGAGTA
CGCAGAAGAAATAAAAAACCATTGCGAAATTCCATTTGTTTTTTTCATCAGCGAGCAGCTGCGAGAGCGACGACCAGCTG
AGGACACCGTGGAGGATCCTCTACTCCGCCGGGCGCCGGCGACCTTCTTCCACTCCTCCCTCCCGTGCAGGTACACCCGC
CTCCCCAAACCCTAAGTGCGTCGATTGGTTAGGGTTTCTTCGCCCCGGTCCCTCATTCCGCCGCTCCAAGTTTTAATTCC
ATGCTGATGGGGCGCTTGATTGCTTGTGAAAATCCATCCATCAACTGTCCCCAGATTTGTCTCCTATGTGCATCTTACGA
CGCAGAGGCCGGGAAATCATCTATCTATCCCCATATGTATCTCTCTCTTGCTTCGGCATCAGTGTGTCTGCATCAGATTT
GCTGATGCAGTTCATTACTACTAGTAGTGTTGGATGCGTAATTAATTGTTCCTTCAACATCACAGTGCGCTGCAAGAATG
TTTCACCCGTCAAGAGTTGAGATGAATT
>chr3A_4
---GTGAGACTTTGAACCCGGGCCAGCAAGAACAACCTTTGTGCTGTCTACCTTTGCACCAAGGCCAACTTACCATTTCA
GGAAATTTTCATGGTCTGTTTAAAAAGAATCATAAATTCCCTCGCTCATGTTGTTGTGATCAAGAGATACTGTGTACTGT
AAATAAGAGTTGATTACACTTTCGACTATGTAGTCTCACCATAGCGGTAATTTGCACCATACTTTTTTGGGGTGGAAAAA
TACTCCCTTTGTAAACAAATATAAGACCGAGTA-----------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TTTTAGAAATGGGTCGTCATAATAGCTA
TGTTTTTGTTTTCTTTCTTTCTCTCGGAGCTTGAGGATACATACATACATACATATGGGGCTAGTGGGACTTTTTTTTTA
CCAACCGCAATCTTCAGGACGGTGGTGAAGGTCTATTGTAATTCCATGGGCCTCACGATGGAATTTTGATTA--------
-----------CAAGTAATTAATCTAATGGGGATGGAGGCTATGATAATGAAAATGGCTATGGAAATGTGATTTCATTTT
TTACAGGGTATTTTTTAGGGGATTTTTACAGGGTATGAAGATGTGAAGTTGATGACGGCTGCCACGGCCCGGTCCCAACA
TGGCTTTAGAACCGT-GCAAGCCCACGTACACGAATATACGGCCCATGGGTTATGTCA-TACGTCCCACCACCCGCATCC
G-------------CCTGCACTGAAAAA-AAAAAGCCCAGTTCGGCTCGAACGCCGCGCCGCCGCACCCACACGCTGCTG
GCTGACCGGTCCTTGCCCGGCGCCGGCTAGCCTCCCTTGCTGCCCCCCGCGCGGAGTGGGCAGCCTCGGCGTCCCCCAGG
CCCGGCTCCACGCGGCGCGGCGCCCGAGGGTGTTCCGCCAGTCCAAGCGCCTGGTGGCATGTACGCCTCTCACACTCGCA
GGCTTCTTCGCCGCGACAGGGGAGCCCGTGCCCATGGCGGCGCCGCCAGGAGGCGCGCGTCGAAGCCTCTGTTGTGCTTC
GTCGGCGCCATCCTCCTCGTCGCGGCCTCTCGCCACACCCTGCTCCCCAAGGTATTGATATAATCTCAGAAGCTGAATGC
CTGAATCCCATCCC-------------------------------------CAGCGGCGCCAAAGATTATTTTTTTTCTG
TATGCCTCGATTGGCT-----------GTTGATCCTTCCCTAGGGTATCA-------GTAGCATTGCAGATCCAGTTGCC
GAAGAACTGTGCTGCAT----TGACTGAATCATTAGCTAATTCCATGTCTTGATTTCCTTCTTGCGAGGGAAGGTGCCAT
TTCTGGGCTCCTTTTGGAGAGTTTCATTGGCATCTGGTGCTTACATTCCCATGCCCAAATTTTACGGTGTAAAGTATGAG
CTGCACACGCTCCCTGTAAGGCC-TCCCTGTCTTGGTGTCTCCTTCTGCATTGGCCCCGAAGGCATATTGCTCACAGATT
TGTGTGGTAGCTTCTTAGGTGGATGCGAAGGCGGTGGCCGACGGTGACACAATCACAGTGTATGTTGACGCGGCTGACCC
TCGTGAGTCCGCCAACGTGCCCCGTGAAGTTCAGCAAGCCGCCGCAGAGCGAACCAAGGCGCGGACGGCCAAGAACTATG
AGAAGGCTGATATGCTACATAAGATCATAGTGGATGCCGGATATAGGTAACTTCAAAAATTAACATCAGGCAACTGTCTA
TTTCTGTGCGGTCTCACCTGCTGACAGTTCTGAAG--------CTTCTTCTAAGTGCAGGCAAGTTCCTGACTTGACAGG
GAAACATGTTCTCGCGAAGAAGTACCGGATCAGGCTAAGGTTTGTCCCACATC--------TTGGTCCCAATCGATGGTC
AAGGGCTTTGTTTGTTCTTATTGGACTGGAGTTGAGATATTATAGAACGAAACG-ATGCAATGCAGAGGGATTGATGCAC
CAGAGAACTCGATGCCTTATGGTAAAGAGGCAAAAGAGGAGCTGGTGAGGCTGGTGAAGGGAAGAACCTTAAAGGTTTCC
ATATGTGATACTGACCGGTACGGTCGATTAGTTGGAGATGTTGTCTGCAATGGTGTCTTCGTGCAGGTAATATGTCATAC
TCTATTGTCACG----TCAGAGTCACCTTTTCGAGGTCTGTTATGCTGGAAATAACCTATGCAAGTACTG-AATTATGTA
TGCTCCATGTGCTGTTTGGTTTTCTTATTAAAAGATCAATAATCATGAAACTGCACATTTACAGTACATGAAACTGTATG
T------------------------------ATTTAAGATTTTGAAAATTCTCAGAACTTTCACCAGAACATAAATCGAA
TCAACAAGCCTCAAATATTACTATTAAATTCTGCACGAAACATGATGTATTTCCTCGTATGAAGATACATGCATACATGC
ATAC-TTATGGGCCTGTTAACCATTTTGCGACTTTTCAACTAAGAAACAATCAAGTTTTCATATCTTGCTTTTAAAACAG
GAACACATGCTGAAGAAAGGCCTCACATGGCACTACTCTGCGTATGATCGACGGCCTGAGCTCGCAGAGGTAAGCAATGT
GACTTGCTTGGCAGCTTCGGTTCACATGACTGAAGAGCAGTATAGCGCACTCTGAGCATTTCTTCAACCTACCAACTACC
ATATATATACACTTGAAAAGACCTTGACAGACTGAAATTTGTTCAGTGGGAGAAGCAGGCGTGGGTGAGCGGGTTGGGCC
TGTGGGCGCTGCCGAACCCTGAGAAGCCATGGGAATGGAGGAAGGAGAAGCGCGCGAGGAAATGGTGAATCATCCGTGAC
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>chr3B_702
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-----------------------------------------------------------------GGCCCGGTCCTAATA
CGGCTTCAGAAAGCACGCAAGCCCACGCACACGACTATACGGCCCATGGGCTATGTCA-TACGTCCCACCACCCCGGTTC
G-------------GCTGCACTGAAAGAGAAAAAGCCCAGTTCGGCTCGAACGCCGCGCCGCCGCGCCCGCACGCTGCTG
GCTGACCGGTCCTTGCCCGGCGCCGGCGAGCCTCCCTTGCTGCCCCCCGCCCGGAGTGGGCAGCCTCGGCGTCCCCCTGG
CCCGGCTCCACGCGGCGCGGCGCCCGAGGGTGTTCCGCCAGTCCAAGTGCCCGGTGGTATGTACGCCTCTCACACTCGCA
GGCTTCTTCGCCGCGACAGGGGAGCCCGTGCCCATGGCGGCGCCGCCAGGAGACGCGCGTCGACGTCTCTGTTGTGCTTC
ATCGGCGCCATTATCCTCGTCGCGATCTCTCGCCACACCCTGCTCCCCAAGGTATTGATATTATCTCAGAAGCTTAATGC
CTGAATAATCCCATTCCCAACTGGTAAC--------------------AGTCAACGGGGCCAACGGTTC---TTTTTCTG
TATGCCTCGATTGGCTCGGCTGTTGCTGTTGATCCTTCCCTAC-----CA-------GTAGCATTGCAGATCCAGCTGCC
GAAGAACTGTGCTGCAATGATTTAT---ATCATTAGCTAATTCATTGTCTTGTTTTCGTTCTTACGAGAGAAGGTGCCAT
TTCTGGGTTCCTTTTGGAGAGATTTATTGGCACCCGATGCTTATATTGCCACACCCAAATTTCATGGTGTGAAGTATGAG
CTGCACACGCTCCCTGTAAGGCC-TCCCTGTCTTGGTGTCTCCTTTTGCATTGGCCACGAAGGTATATCACTCAGAGATT
TGCATGCTAGCCTCTTAGGTGGATGCGAAGGCTGTGGCCGACGGTGACACAATCACGGTGTATGTTGACGCGGCTGACCC
TCGTGAGTCCGGCAATGTGCCCCGTGAAGTTTGGGAAGCTGTGTCAGAGCGAACCAAGGCGCGGGCGGCCAAGAACTATG
AGAAGGCTGACACGCTGCAGAATATCATAGTGGATGCCGGATATAGGTAACTTCAAAA-TTAACATCAGGCAACTGCCTA
TTTCTGTGCGGTCTCACCTACTGAACG--------TTCTGAAACTTCTTCTAAGTGCAGGCAAGTTCCTGACTTGACAGG
GGAACAGGTTCTCGCGAAGAAGTACCGAATCAGGCTAAGGTTTGTC--ACATC--------TTGGTCCCAATCCATGGTC
AAGGGCTTTC----TTCTTATTGGACTGCAGTTGAGATATTATAGAACGAAACG-ATGCAATGCAGAGGGATTGATGCAC
CAGAGAACTCGATGCCTTATGGTAAAGAGGCAAAAGAGGAGCTTGTGAGGCTTGTGCAGGGAAGGACCTCAAAGATTCCC
ATATATGAAACTGACTGGTACGGTCGATTAGTTGGAGATGTTTACTGCAATGGGGTCTTCGTGCAGGTAATATGTCATAT
--TATTATCTCT----TTGGAGTCACC-TTTGGAGGTCTGTTATACTGAAAATAGCGTATGCAAGTACTGG-ATCATCTA
TGGTACATGTGCTATCTGGCTTTCTTAAACACT----AATAGTCTTGAAATTGCACATTTACAGCAGAAGAAACTGAATG
TGAATTACTTAAAGAAAAAAACTGAACGTGTATTCAAGATTTTGTAAGTTCTTAGAACTTTTACCAGAGCATAAATCGGA
GCAACACGCTTAAAATAATACTATTAAACTCTGCAGGAATCATAACGTATCTCCTCAGCTGAAGATAAATA--------C
ATGCTTTATGGGCTTGTTAACCACTTAGCGACTTTTCAATTAAGAAACAATCAAGTTTTCATATCTTGCTTT---AACAG
GAACACATGCTGAAGAAAGGCCTCACATGGCACTACTCTGCGTATGATCAACGGCCTGAGCTTGCCGAGGTAAGCAGTAT
GACTCGCTTGACAGCTTCAATTCACATGACTGAAGAGCAGTATAACGCACTCTGAACATTTCTTCAACCTACC-------
--ATATATACACTTGAAAAGACCTTGACAGACTAAAATTTTGTCAGTGGGAGAAGCAGGCGCATGCGAGCGGGTTGGGTC
TGTGGGCGCTGCTGAACCCTGAGAAGCCATGGGAATGGAGGAAGGAGAAGCGCACGAGGAGATGGTGAATCATCAGTGAC
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>SNPs
SSS----S-------------------S-S-------------SS---------SSS-----------------------
----S--------------------------S--S-------S-----S----------------------------S--
--------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S--------SS---------------
S-S----S-S---------------S--------------------SS--------------------------------
------------------------------------------------------S-----------------SSSSSSSS
SSSSSSSSSSS----------------S-------------------S----------------------------S---
----------------------------------------------S--------S------S-----------------
--------------S--------S----------------------------------S---------------------
-SSSSSSSSSSSSS------------------S----------S----------S------------S------------
SSSS------------------------------S--------------------------S----------S--S----
-----------------S--------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------SSSSSSSSSSSSSSSSSSSSSS-S-------------S----S----S-S-SS-
--------------------------------------------------SSSSSSS------------------SS---
-------------------SS----S---S----SS---------------------S---------------S------
-S-------------------------------------S--------------------S-------------------
-----------------------S-------S-----------------------------S----SS-SSSSSSSS---
----------S---------------S-----------S-----------S------------------S----------
----------------------S-------------------S-------------------------------------
-------------------------S-----------S-----------------S-SSSSS----S-S-----SS---S
---S----S---S--SS-----------SSSS--S---------S------S-S----------------S---------
----------------------------S------------S-------S--SSSSSSSSS-----------S----S-S
----S--------------S------S------S----S----S--SS----S-S---S---S-----------------
-S----------------------S------S-----------S----S------------------S------------
--------------------S-----------------------------------S-----------------------
---S------S-SSSS---------------------------------------S------S-----SSS-----SS-S
------------------S-------------------S-----------------------------------------
----------------------------------S----S--------SS----S----------S-----------S--
-----------------S-----------------SS-------S-------------S---------S-----------
------------S---------S--------SS---SS------------SS-----S---------------S------
-----------S--------S---------------S----S--S--------S--S-----------------------
S--SSSSSSS-SSSSSSSS---S--S---------S----------------------S--S------------------
--------S----------------S-----------S----------------------S--S---S------------
-------------S-----S---------------------------------------------------S--------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_783
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-------------------------------------------TGAGGTTGATGATGGCTGCG-----------------
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>reverse_2143
--------------------------------------------------------------------------------
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--------------------------------------------------------------ACAGAGGGATTGATGCAC
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1461
--------------------------------------------------------------------------------
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-AAGAACTGTGCTGCATTGGC-----------------------------------------------------------
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>reverse_3339
--------------------------------------------------------------------------------
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----------------------------------------------------------CTCGTGCTCGTAGCTAGTGG--
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----------------------------
