>input_sequence_42428
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------ATGGCGATGCCGGGTCCGGGTAATCTCCTCACGGTCGACCAATCCGGCAAAGGCGATTACAGGAAGATCCACGA
GGCGATCGCCGCCGCCCCGGTGAACAGCTCCGCCCGCACTGTCATCCTCATCAAGCCCGGAGTCTACAAGTAAGTTT---
-------------CCTTCTGAATTCTGATACGGGAGTACTAGTAGACAGTACGTGGTGTGGTGCATGCCTGATCGCCTGT
AATCTTTCGTTGCAGGGAGAAGATCGTCGTCCCCGTGGACAAGCCCAACATAACACTTTTCGGCACCAGCGCCAACACGA
CCGTCATCACCTGGAACGAGCCCTGGCTCTCGACCGACACTTCCCCTACCGTGACCGTTCGGGCCTCCGACTTCGTCGCC
AGCCGCTTAACGTTCCGGGTAAGTCTGCCATCCATGGTTCGTGCTTGCACACAGAGAGCGAGGTGCGCGTGTTGACAGTT
TCTTGCTGATTTTCTCGGGGTTTTAGAACACGTTCGGGACCAGCAAGCAGGCCATCGCGGTGAGAGTCGCCGGAGACAGG
GCGGCGTTCTACGGGTGCAGCTTCTCGTCGTTCCAAGACACGCTCCTCGACGACAACGGGCGCCATTACTACTGCGGGTG
CTACATCGAAGGTGGCACCGACTTCATATGCGGGAACGGCCGGGCTCTCTTTGAAGTAAGT---ACTACATGTTCACCGT
TCTCACCAGCAAACCCGTGCGCATAGAT---A------------------------------------------------
---------------------------------------------------GATCATACGTACTTACTCCGTACGCACGA
GAGAGGTTTGAATGGCGGTCATGTAATAGGATAGACATGTAGTGTTCCTATTGTGTTTGCCAGCCGGTTGTGGCTTTGAG
TTTTAGCTCTTTCGAGCTTATTGTTTATTTTCGCACCTCGATACTTGACGACTTTGTTACTGGATTATAATTTTAAAAAT
ATGAGCCATATGCATCTTTCTGATGCAGGGTAAACCCCCTTTTCAAAAAAAAAAAAAAACGAAAAGAAAAACGCACAAGA
GGTTGCTTTGC--TGCCAAGATCAACTAACAATATATAGTTCGTGTGCAGAAATGCCACCTGCACTCCACCTCGCTCACG
GGCGGCGCCTTCACAGCGCAGAAGCGGGCGTCCGAGTCGAACTACACGGGATACAGCTTCGTCCGGTGCAAGCTAACCGG
CGTCGGGGTCAGCACCTCCATCCTGGGGCGTCCATGGGAGCCCTACTCCCGCGTCGTGTTCGCTCTCACCTACATGTCCG
CAACGGTGAGCCCTCGAGGCTGGAATGACTGGAACCACACCGCCAACCAGAGGTAAACTTAGGGCCTCTTTGATTCACAG
GATTTTCAAAATGAAAGAATAGGAAAAGTGCAGGAATAGGGTGACATGTCCCATAGTATCCTACAGGATTTGAAAGAATG
TTTGATAGCATTAGAAAAACAAAGGAATTCTATAAAGAGGTTTGAGTGGATGGAAATTTTCCTTCAAAATGTAGTACAAA
TGGATCATATGGAAAAATTTCTAAGGATGCCAATCCTATGAATCAAACGAGTATCACAGGAAAAATTCCTAAGAGTTTAA
ATCCTTCAAAAATCCTATGCAATTCTTTTGAATCAAAGGAACCCTTAGTCTTGCTCCGCTGCCATTTTCCCGCCAAAGGA
AGACCAATATATAACGCGCTTTGGCCTGGGTTTGCAACTTTGCATTGCATGCAGGACGGCGTTCTACGGGCAGTACCAAT
GCTACGGCCAAGGGGCGAAAACTGATGGCAGGGTTAAGTGGGCTCGCAACCTCTCGCCAACCGAAGCAGCCCCCTTCATG
ACCAAGGCCTGGATCGATGGACAGCAGTGGCTTCCGAAGCAGCCCGCTTCATGA--------------------------
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>chr3A_1_TraesCS3A01G226400
CTTCGCTTATGGTGATGAACAATAATTAAGAGTAAATTATGTGGCCTCTCAGCAGTCATTTTGTCAGGGGAAGCACGGTG
ACAGCCGATCGTCGACGAGCAGTCAGGCATC-------AACTTGTAAGCAGCCTAGCGTAGTAACCGAGAGTGTTTGTTC
TCTGTGTGAGACGTTG-----GATCTCTATTGGTTGGACCCTCAAAAA---AATGAAGAAGAAAACTAAATTCGAAACCT
GGCAAAGTGGCAAATAAAAGGCGAATCTCACCGACCATCTCCCGTCCCGTTCAATCTAACAGTGCAGTGCAGCATATAAC
AAGATTACTAAGATCATCAAGCATGAGATATCCAAAGTTCAATCCATCGTCAAATTTATTTCCCATACACCATGATCAGA
TGGAGTGCATGAACGATACACACCCTAGGGGCAGTTTGAAACTGGTCAGATAGTTTGTTAGCTTTCCTTGTATGGATTTC
TTGAGCTCTTGGAGCTGTCCTTCACATGTGTCGATGGTTATGGAAAACAATGTGCCATCTGAGCA----------ATGTA
TAGGAGAAAGCAAACACCCTTTTCTTCTCTTCCAGGTCAGCAATTAGCAATTATCTTACGTGATTTCTTTTCTGAAGATA
AGGTTAAAGCCACCAACCACATTATACACACCCTTTACATTTAGGACAACTGTTTATGTGCATGTCTACTTGTGAGACAT
TCACGAGCCAATTTCTCGTGATGGATGGGTTTTCTTTGTTCCAAAGTTACTGAAAGACCACAAAAAGGATCACATGAGAG
TGAGCTTGCACCGATCCGTTGACGCACCCTCCACTCCAC-TATATAAATCCCATC-CCGCCTGCACCGAATGGCGCGAAA
TCAATCGG--------GATGT-----TGAATCATCGGGAGATGTTAGATCGCGTCAACTCGGCGGCCAGGGTCGCCATAC
TGCTGGCTCTGCTCTGCTTTTGCTCTGCCACCTCTTCCTACTCTTTCCCCGACGACGCGGCCT------GTGCCGGTGCG
AGTGGCATGGCGATGCCGGGTCCGGGTAATCTCCTCACGGTCGACCAATCCGGCAAAGGCGATTACAGGAAGATCCACGA
GGCGATCGCCGCCGCCCCGGTGAACAGCTCCGCCCGCACTGTCATCCTCATCAAGCCCGGAGTCTACAAGTAAGTTT---
-------------CCTTCTGAATTCTGATACGGGAGTACTAGTAGACAGTACGTGGTGTGGTGCATGCCTGATCGCCTGT
AATCTTTCGTTGCAGGGAGAAGATCGTCGTCCCCGTGGACAAGCCCAACATAACACTTTTCGGCACCAGCGCCAACACGA
CCGTCATCACCTGGAACGAGCCCTGGCTCTCGACCGACACTTCCCCTACCGTGACCGTTCGGGCCTCCGACTTCGTCGCC
AGCCGCTTAACGTTCCGGGTAAGTCTGCCATCCATGGTTCGTGCTTGCACACAGAGAGCGAGGTGCGCGTGTTGACAGTT
TCTTGCTGATTTTCTCGGGGTTTTAGAACACGTTCGGGACCAGCAAGCAGGCCATCGCGGTGAGAGTCGCCGGAGACAGG
GCGGCGTTCTACGGGTGCAGCTTCTCGTCGTTCCAAGACACGCTCCTCGACGACAACGGGCGCCATTACTACTGCGGGTG
CTACATCGAAGGTGGCACCGACTTCATATGCGGGAACGGCCGGGCTCTCTTTGAAGTAAGT---ACTACATGTTCACCGT
TCTCACCAGCAAACCCGTGCGCATAGAT---A------------------------------------------------
---------------------------------------------------GATCATACGTACTTACTCCGTACGCACGA
GAGAGGTTTGAATGGCGGTCATGTAATAGGATAGACATGTAGTGTTCCTATTGTGTTTGCCAGCCGGTTGTGGCTTTGAG
TTTTAGCTCTTTCGAGCTTATTGTTTATTTTCGCACCTCGATACTTGACGACTTTGTTACTGGATTATAATTTTAAAAAT
ATGAGCCATATGCATCTTTCTGATGCAGGGTAAACCCCCTTTTCAAAAAAAAAAAAAAACGAAAAGAAAAACGCACAAGA
GGTTGCTTTGC--TGCCAAGATCAACTAACAATATATAGTTCGTGTGCAGAAATGCCACCTGCACTCCACCTCGCTCACG
GGCGGCGCCTTCACAGCGCAGAAGCGGGCGTCCGAGTCGAACTACACGGGATACAGCTTCGTCCGGTGCAAGCTAACCGG
CGTCGGGGTCAGCACCTCCATCCTGGGGCGTCCATGGGAGCCCTACTCCCGCGTCGTGTTCGCTCTCACCTACATGTCCG
CAACGGTGAGCCCTCGAGGCTGGAATGACTGGAACCACACCGCCAACCAGAGGTAAACTTAGGGCCTCTTTGATTCACAG
GATTTTCAAAATGAAAGAATAGGAAAAGTGCAGGAATAGGGTGACATGTCCCATAGTATCCTACAGGATTTGAAAGAATG
TTTGATAGCATTAGAAAAACAAAGGAATTCTATAAAGAGGTTTGAGTGGATGGAAATTTTCCTTCAAAATGTAGTACAAA
TGGATCATATGGAAAAATTTCTAAGGATGCCAATCCTATGAATCAAACGAGTATCACAGGAAAAATTCCTAAGAGTTTAA
ATCCTTCAAAAATCCTATGCAATTCTTTTGAATCAAAGGAACCCTTAGTCTTGCTCCGCTGCCATTTTCCCGCCAAAGGA
AGACCAATATATAACGCGCTTTGGCCTGGGTTTGCAACTTTGCATTGCATGCAGGACGGCGTTCTACGGGCAGTACCAAT
GCTACGGCCAAGGGGCGAAAACTGATGGCAGGGTTAAGTGGGCTCGCAACCTCTCGCCAACCGAAGCAGCCCCCTTCATG
ACCAAGGCCTGGATCGATGGACAGCAGTGGCTTCCGAAGCAGCCCGCTTCATGACCA--AGCCTTGGATCGGTGGACAGC
AGTGGCTTCGGTAGAAAACTGTCGGTGGTGTGGGTTGTCATATATACCTGACACATATCTGTGTT------------ATT
TGAAGGATACAAGTTAAAGGAAAATACATGGATGAATCCAGAAACATATGAACCCACTTAAAAAAACACATTTCTAAACA
-CAAAAAATTCTAAAAAAAAGTTGCGCACGTACATTTTCATGTTCTATGTACGGTCAGAAAGTTTCGCGAAAAAACAACT
TCTCGTTTGGCCTGTGCAAAAAACATACAAAAAGAGTGTGTCGTTGAACTTTATTTAGAAGCACTAAAATTTATCTTTTT
TATAGAGGCAAAATAAAAAGATATTTTTCCGAAGAACGTTGTGCTGCACACATA---TTTTGTGAACATGCTCACGTGAA
ATTTTATTTTGAC-TTTTTTTTTACATTTTAAAACATGCTTAAAATGCATTTTT--AAACCGGATTCATATGTATCCGAG
TTCAGGGCGTGCCTTCTCAGAAGTTAACAGTTCTCTTTTAAAGGCCGAAAGTTTTTT--TCACGGGGAGGAAAATTTGTA
AGTTCATCAAAAGTCTGAACTGATGTAAAGAGACGAACAAAATCTTCTAAATCACTAAGCTCCCTAGGGGTAAAACTCCT
AGGAAGCGATTGAGGCTACTGATTCGTTTTGTCATTTCGATTTAGATCCCCTC--------ACATGTCCTTACCTAGGTG
TATACATGTCATTGACTCGCTTTCCCCATCTTTTTCCCTTGCCTCGCACTGTCTCGGCCA--------CTCTAGATATAC
CAAATGCTACACACCTGATAGCATTCCCCACAATTGCCAGGGTGTGGATCTTTGAACTCATGGAATCAACAATGTACATG
AGTGACACAGAGGAAGGGGGAGAGTTAGCTTGAGGAAGAAGCTCTATGTGAGGAGTATAAGAGTTTAGTGGATACAAATG
ATCTTGAATGCGCTGCACAAACACAGCTAATAACTACATAAGCTACGACGCTC
>chr3B_1
CTTCGCTGATGGTGACGAACAATAATTAAGAGTAAATTATGTGGCCTCTCAGCAGCCATTTTGTCAGGGGAAGCACGGTG
ACAGCCGGTCGTCGACGAGCAGTCATGCATGAGCTTGTAACTTGTAAGCAGCCTAGT---------GAGATTTTTTGTTC
TCTGTGTGAGCCGTTGCGTTCGATCTCTATTGGTTTGACCATCAAAAAATGAATGAAGAAGAAAACTAAATTTGGGACC-
-------TGGCAAATAAAAGGTGAATCTCGCTGACCATC-----TCCCGTTCAATCTAACAGTGCAGTGCAGCATATAAC
AAGATTACTAAGATCATCAACCATGAGATATCCAAAGTTCAATTCATCGTCAAATTTATTTCCCATACACCATGATTAGA
TGGAGTGCATGAACGATGCACACCCTAGGGGCAGTCTGAAACTGGTCAGATAGTTTGTTAGCTTTCCTTGAAAGGATTTC
TTCAGCTCTTGGAGCTGTCCTTCACATGTGTCGATGGTTATGGAAAACAATGTGCCATCTAAGCAAAACTAGTTCATGTA
TAGGAGAAAGCAAACACCCTTTTCTTCTCTTCCAGGTCAGCAATGAGCAATTATCTTACGTGATTTCTTTTCTGAAGATA
AGGCTAAAGTCACCAACCACA------------------TTTAGGACAACTGTTTATGTGCATCTCTACTTGTGAGACAT
TCACGAGCCGATTTCTCGTGATGGAGGGGTTTTCTTTGTTCCAAAGTTACTGAAAGACCACAAAAAGGATCACATGAGAG
TGAGCTTGCACCGATCCGCTGATGCACCCTCCACTCCACATATACTATAAAGCCATCCGCCTGCA---------ACGAAC
GCGATCAGCGTGCCTTGATGT-----TGAATCATCGGGGGATGTTAAATCGCGTCAACTCGGCGGCCAGGGTCGCCATAC
TGCTGGCTCTGCTCTGCTTTTGCTCTGCCACCTCTTCCTACTCTTTCCCCGACGACACGGCCTGTGCCCGTGCC------
AGTGGCATGGCGATGCCGGGTCCGGGTAATCTCCTCACGGTCGACCAATCCGGCAAAGGCGATTACAGGAAGATCCACGA
GGCGATCGCCGCCGCCCCCGCGAACAGCTCCGCCCGCACTGTCATCCTGATCAAGCCCGGAATCTACAGGCAAGT-ACCG
CAAATGACCATTACCTTCTGAATTCTGAATTCTGA--------------TACGTGGTGTGGTGCATGCCTGATCGCCTGG
AATCTGTCGTTGCAGGGAGAAGATCGTCGTCCCCGTGGACAAGCCCAACATAACACTTTTCGGCACGAGCGCCAACACGA
CCGTGATCACCTGGAACGAGCGCTGGGTATCCAGCGACACTTCCCCTACCGTGTCCGTTCTGGCCTCCGACTTCGTCGCC
AGCCGCTTAACGTTCCGGGTAAGTCTGCCATCCATAGTTCGTGATTGCAAAGAAAGAGCGAGACGCGGGTGCTGACAGTT
TCTTGCTAATTTTCTCGGGGTTTTAGAACACGTTGGGGACCAGCGCTCCGGCCATTGCGGCGAGAGTCATGGGAGACAGG
GCGGCGTTCTACGGGTGCAGCTTCTCGTCGTTCCAAGACACGCTCCTCGACGATAACGGGCGCCATTACTACTGCGGGTG
CTACATCGAAGGTGGCACCGACTTCATCTGCGGGAACGGCCGGGCTCTCTTTGAAGTAAGT---AC---ATGTTCACCCT
TCTCACCAGCAAACCCGTGCGCATAGATGATA------------------------------------------------
---------------------------------------------------GATCATACGTACTTACCCCGTACGTACGA
GAG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-GTTGCTGCCAAGTGCCAAGATCAACTAACAATG----GTTCGTGTGCAGAAATGCCACCTGCACTCCACCTCGCCCAAC
GGCGGCGCGTTCACGGCGCAGAAGCGGGCGTCCGAGTTGAACCACACCGGATACAGCTTCGTCAGGTGCAAGCTGACCGG
CGTCGGGGTCAGCACCTCCATCCTGGGGCGTCCATGGGAGCCCTACTCCCGCGTCGTGTTCGCTCTCACCTACATGTCCG
CAGCGGTGAGCCCTCGAGGCTGGGATGACTGGAACCACACCGCCAACCAGAGGTAAACTTAG------------------
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------------------------------------------------TCTTACTCCGCTGCCATTTTCCCGCCAAAGGA
AGACCAATATATGACGCGCTTTGGCCTGGGTTTGCAACTTTGCAT-----GCAGGACGGCGTTCTACGGGCAGTACCAAT
GCTACGGCCAAGGGGCGAAAACTGATGGTAGGGTTAAGTGGGCTCGCAACCTCTCGCCAATCGAAGCAGCCCCCTTCATG
ACCAAGGCCTGGATCGGTGGGCAGCAGTGGCTTCCGAAGCAGCCCCCTTCATGACCAAAAGGCTTGGATCGGTGGACAGC
AGTGGCTTCCACAGAAAACAGTCGGTGGTGCGGGTTGTCATATATACTTGACACATATCAGTGTTATTAGTGTTTTCATT
TGAAGGATACAAGTTAAAGGAAAATACGTGGATGAATCCGGGAACATATGACCTCACTTTCGAAAACACATTTCTAAATG
CCAAAAAATTCTGAAAAAATGTTGCACGCATATATTTTCATGTTCTATGTGCGCGCAGAAAGTTTCGTAAAAAAACTACT
TTTTATTTGGCCCGTGCAAAAAAAAACAGAAA---ATGTGTCATTGAACTTTATTTAGAAGCACTGGAATTTGTCTTCTC
TGCGGAGGCAAAATAAAAAGACATTTTTCCGCAAAATGTTGTGCTGCACACATATTTTTTTGTGAACATGTTCACGTGAA
ATTTCATTTTGA---TTTCTTTTACATTTTAAAACATGGTTAAA-TGCATTTTTTAAAAGCGATTTCATATGTACCCGAG
TTCAGGGCGTGCCTTCTCAGAAGTTAACAGTTCTGTTTTAAAGGCCGAAAGTTTTTTTTTCACGGGGAGGAAAATTAGTA
AGTTCATCAAAAGTCTGAATTGATGTAAATAGACGAACAATATCTTCTAAATCACTAAGCTTCCTAGGGGTAAAACTCCT
AGGAAGCGATTGAGGCTACTGATTCATTTTGTCATTTCCATTTCGATCCCCTC--------GCATGTCCTTACATAGGTG
TATATATGTCATTGACTCGCTTTTCCCATCTTTTACCCTCGCCTCGCACGGTCTCAAGCA--------CTCTAGATATAC
CAAATGCCACACACCTGATAGCATTCCCCACAATTGCCAGGGTGTAGATCGTTGAACTCATGGAATCAAGAGTGTACATG
AGTGATACAGAGGAAGGGGGAGAGTTAGCTTGAGGAAGAAGCTCTATAGGAGGAGTATAAGAGTTTAGTGGATACAAATG
ATCTTGAATGTGCTGCATAAACACATCTAATAACTATAAAAGCTACGACGCTC
>chr3D_428
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------------------------------------------TGGTCAGATAGTTTGTTAGCTTTCGTTGTATGGATTTC
TTCAGCTCTTGGAGCTGTCTTTCACATGTGTCGATGGTTATAGAAAACAATGTGCCATCTAAGCAAAACTAGTTCATGTA
TAGGAGAAAGCAAACACCCTTTTCTTCTCTTCCAGGTCAGCAATTAGCAATTATCTTACGTGATTTCTTTTCTGAAGATA
AGGTTAAAGCCACCAT----ATTATGCACACCCTTTACATTTTGGACAACAGTTTATGTGCATGTCTACTTGTGAGACAT
TCACGAGCCAGTTTCTCGTGATGGAGGGATTTTCTTTGTTCCAAAGTTACTAAAAGACTACAAAAAGGATCACATGAGAG
TGAGCTTGCACCGACCCGCTGACGCACCCTCCACTCCACATATATAAAGCCCATC-CCGCCTGCACCGAATGGCACGAAC
GCGATCAGCCTGCCTTGAGGTTGAAATGAATCATCGGGAGATGTTACATCGCGTCAACTCGGCGGCCAGGGTCGCCATAC
TGCTGCCTCTGCTCTGCTTTTGCTCTGCCACCTCTTCCTACTCTTTCCCCGACGACGCGGCCT------GTGCC------
AGTGGCATGGCGATGGCGGGTCCGGGTAATCTCCTCACGGTCGACCAATCCGGCAAAGGCGATTACAGGAAGATCCACGA
GGCGATCGCCGCCGCCCCCGCGAACAGCTCCGCCCGCACTGTCATCCTGATCAAGCCCGGAGTCTACAGGCAAGTAACCG
CAAATGACCATTACCTTCTGAATTCTGAATTCTGA--------------TACGTGGTGTGGTGCATGCCTGATCGCCTGG
AATCTTTCGTTGCAGGGAGAAGATCGTCGTCCCCGTGGACAAGCCCAACATAACACTTTTCGGCACGAGCGCCAACACGA
CCGTCATCACCTGGAACGAGCAGTGGGTGTCGAGCGACACTTCCCCTACCGTGTCCGTTCTGGCCTCCGACTTCGTTGCC
AGCCGCTTAACGTTCCGGGTAAGTTTGCCATCCATAGTTCGTGATTGCAAAGAGCGAGCGAGGCGTGCGTGTTGACAGTT
TCTTGCTAATTTTCTCGGGGTTTTAGAACACGTTGGGGACCAGCGCTCCGGCCATCGCGGTGAGAGTCATGGGAGACAGG
GCGGCGTTCTACGGCTGCAGCTTCTCGTCGTTCCAAGACACGCTCCTCGACGACAACGGGCGCCATTACTACTGCGGGTG
CTACATCGAAGGTGGCACCGATTTCATCTGCGGGAACGGCCGGGCTCTCTTTGAAGTAAGTTTTAC---ATGTTCACCGT
TCTCACCAGCAAACCCGTGCGCATTGAT---AGATACCCCCTCCGTTTCAAAATAGATGACCCAACTTTGTATTAACTTT
ATACTAAAGTTAGTATAAAGTTGGGTCATCTATTTTGAAACGGAGGGAGTGGATCATACGTAGTTACTCCGTACGTACGA
GAG-----------------------------------------------------------------------------
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-GTTGCTTTGC--TGCCAAGATCAGCTAACAATATATAGTTCGTGTGCAGAAATGTCACCTGCACTCCACCTCGCCCAAC
GGCGGCGCCTTCACGGCGCAGAAGCGGGCGTCCGAGTCGAACCACACGGGATACAGCTTCGTCGGGTGCAAGCTGACCGG
CGTCGGGGTCAGCACCTCCATCCTGGGGCGTCCATGGGAGCCCTACTCCCGCGTCGTGTTCGCTCTCACCTACATGTCCG
CAGCGGTGAGCCCTCGAGGATGGGATGACTGGAACCGCACCGCCAACCAGAGGTAAACTTAG------------------
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------------------------------------------------TCTTGCTCCGCTGCCATTTTCCCGCCAAAGGA
AGACCAATATATGACGCGCTTTGGCCTGGGTTGGCAACTC-----TGCATGCAGGACGGCGTTCTACGGGCAGTACCAAT
GCTACGGCCAAGGGGCGAAAACTGATGGCAGGGTTAAGTGGGCTCGCAACCTCTCACCAACCGAAGCAGCCCCCTTCATG
ACGAAGGCCTGGATCGATGGACAGCAGTGGCTTCCGAAGCAGCCCCCTTCATGACCAA--GCCTTGGATCGGTGGACAGC
AGTGGCTTCGGTAGAAAACAGTCGGTGGTGTGGGTTATCATATATACTTGACACATATCAGTGTTATTATTGTTTTCATT
TCAAGGATACAAGTTAACGGAAAATACGTGGATGAATCCACGAACATATGAACCCACTTAAAAAAACACATTTCTAAATG
CTAAAAAGTTCTGAAAAACAGTTGCGCTCGTACATTTTCATGCTCTATGTGCGCCAC-AAAGTTTCGCGAAAAAACAACT
TCTCATTTGGCCTGTGCAAAAAACATACAAAAAGTATGTGTCGTTGAACTTTATTTAGAAGCACTAAAATTTGTCTTATT
TACGGAGGCAAAACAAAAAGATA-TTTTCCACAGAATGTTGTGCCGCACACATA---TTTTGTGAACATGTTCACGTGAA
ATTTCATTTTGACTTTTTTTTTTACATTTTAAAACATGCTTAAAATGCATTTTTTTAAAGCGGTTTCATATGTATCCGAG
TTCAGGGCGTGCCTTCTCAGAAGTTAACAGTTCTCTTTTAAAGGCCGAAAGTTTTTT--TCACGGGGAGGAAAATTTGTA
AGTTCATCAAAAGTCTGAATTGATGTAAAGGGACGAATAAAATCTTCTAAATCACTAAACTCCCTAGGGGTAAAACTCCT
AGGAAGCGATTGAGGCTACTCATTCGTTTTGTCATTTCGATTTCGATCCCCTCACATAGTCACATGTCCTTACCTAGGTG
TATA-ATGTCATTGACTCGCTTTCCCCATCTTTTCCCCTCGCCTCGCACGGTCTCGGCCTGACGGCCTCTCTAGATATAC
CAAATGCTACACACCTGATAGCATTCCCCGCAATTGCCAGGGTGTGGATCTTTGAACTCATGTAATCAAGAGTGCACATG
AGTGATACAGAGGAAGGGGGAGAGTTAGCTTGAGGAAGAGGCTCTATGGGAGGAGTATAAGAGTTCAGTGGATACAAATG
ATCTTGAATGCGCTGCACAAACACAACTATTAACTATATAAGCTACGACGCTC
>SNPs
-------S-------S---------------------------------------S------------------------
-------S-----------------S----S-------------------------SSSSSSSSSS----S-S-------
----------S------------------------S----S-------------------------------S-SS---S
SSSSSSS--------------S-------S-S-------SSSSS------------------------------------
--------------------S----------------------S--------------------------------S---
-----------------S-----------------S--------------------------------------------
--S---------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
-------------------------S------------------------------------------------------
------------------S-----------------------------S-------------------------S----S
S-S---S---------------------------------------S---------------------------------
--------------------------------------------------------------------------SSSSSS
--------------------------------------------------------------------------------
------------------S-S---------------------------S-------------------S-S----SS---
----------------------------SSSSS--SSSSSSSSSSSSSS------------------------------S
------------------------------------------------------------------S-------------
---------------------S----S-S----S-------------------S------S-------------------
-----------------------------------S-------S-----S-S-----------S----------------
-------S--------------------------S---------SSS-S-------------------SSS---------
--------------------------------------------------------------------------------
---------------------------S--------------------------------------SSS-----------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S--------------------------------------------------------------------------S--SS
--------------S---------------------------S--------------------S----------S-----
--------------------------------------------------------------------------------
--S--------------------S--------------------------------------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
-------------------S---------------------------S-----------S--------------------
---------------------------S-------------S------------------------------------SS
------------S--------------S----------------------S--SS-------------------------
----S-----------------------------SS------------------------------------S----S--
--SS---------------------------S----S---------------------------------S---------
----S------------------------------------------------------S---S----------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
-------------------------------------------S------------------------------------
----S-----------------------------S----S---------S------------------------------
---------------------------------------------------------------------S-S--------
-----S------------------------------------------S-------------------------------
-------------------------S----------S----------------
>forward_280
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--------------------GCGAATCTCACCGACCATCT----------------------------------------
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>reverse_2032
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-------------------------------CGCACCTCGATACTTGACGA-----------------------------
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>forward_1986
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----------------------------------------------CCTATTGTGTTTGCCAGCCG--------------
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>reverse_3392
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-------------------------------AAGAACGTTGTGCTGCACAC-----------------------------
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