>input_sequence_42364
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------------------------------------------GATTAAATTGTAGAGCTTATGTGGTTATCCACTTCGCT
ACCTGCCATTTTTTTTCCAGTTAACGTAGATCGCATGTTGGATGGATTTAATTATTTCAGCGTTCAAGTAAAGTGACTGT
GCAGCTACTGGAATAGGTTGACATACGTTGTCGTATTCCATTGAATGCCTCGCTTT------------------------
--------------------------------------------------------------------------------
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------------------------------------------------TTTTTTCCATGCAAAATCTGAAGTCAAGACT-
-----------------CCATCACTTACAT-CACTCTGACCGTTTCTTACACTTGGTAGCTTCTGTATTCCGCAGGTGAA
CTGAGTACCCAACTTTTGTCAAGATGTCTGATAGTCATGAAACCGACAAGAATATTGAGATGTGGAAGATCAAGAAGCTG
ATCAAGGGACTCGAGTCTGCTAGAGGCAATGGCACAAGCATGATCTCTCTGATTATGCCTCCACGTGATCAAGTCTCGCG
TGTGACAAAGATGTTGGGTGATGAATATGGTACTGCTTCAAACATAAAGAGTAGAGTCAATCGTCAATCTGTTTTGGGAG
CCATCACCTCAGCGCAGCAGAGGCTGAAGCTGTATAACAGGGTTCCCCCAAATGGACTAGTTCTTTACACTGGAACAATT
GTTACTGACGATGGCAAGGAAAAGAAGGTTACAATCGATTTTGAGCCATTCAAGCCCATCAATGCGTCCTTGTACCTTTG
TGACAATAAATTCCACACTGAAGCATTGAGTGAGCTCTTGGAATCCGATGACAAGTTTGGCTTCATCATTATGGATGGTA
ATGGAACTCTTTTTGGCACACTTAGTGGCAATACTCGTGAAGTGCTTCACAAGTTCAGTGTGGATCTCCCCAAGAAGCAT
GGAAGAGGAGGGCAATCTGCTCTGCGTTTTGCTCGCCTTCGGATGGAGAAGCGCCACAATTATGTTCGGAAAACAGCTGA
ACTTGCTACTCAGTTCTTC-ATCAACCCAGCTACCAGCCAGCCTAATGTTGCAGGACTAATATTGGCTGGTTCTGCTGAT
TTTAAAACAGAACTGAGCCAATCTGACATGTTTGATCAGCGCCTTCAGTGCAAGATACTTAATGTGGTTGATGTTTCATA
TGGTGGTGAGAGCGGTTTCAACCAGGCCATTGAGTTATCAGCTGAAATTCTAGCAAATGTGAAGTTCATACAAGAGAAGA
AGTTGATCGGGAAGTACTTTGAAGAGATTAGTCAAGATACTGGGAAGTATGTCTTTGGAGTTGATGACACCCTGAAGGCT
CTTGAAATGGGTGCTGTTGAAACTTTGATGGTGTGGGAAAACCTTGATGTCAATCGGTTTGTGCTTAAGCACAGTGCAAC
TGGAGAAATTATCATTAAGCATCTGAACAAAGAAGGTGAAGCCGACCAGAGCAACTTCCGTGATCCATCTACCAATGCTG
AGTTAGAAGTCCAGGAGAAGACCTCACTTCTGGAATGGTTTGCTAATGAATACAAAAAGTTTGGGTGCACCCTTGAGTTT
GTTACCAATAAATCTCAAGAGGGCTCGCAGTTCTGTAGAGGGTTTGGTGGCATTGGCGGCATCCTCCGCTATCAGCTGGA
CATTCGCTCCTTTGATGATCTTGATGACGACGAGGGTGTCTATGAAGACTCTGATTAGCAACCAATCAATCACATGCCTG
AGGCAGTCGCGGTTAAATCTGAATTTGGCGCGACTATTTGCTCCGGAGCACCTCAAAGAAGCTGTGAGTTTCGTCTCAAT
ATGCAATTAGCTTGTAATTCTATTGTCTGCTC---CATGATTTCTGAAGCTCTCCTGTTCTATTTTCAGATCCATTGGAT
GATGGGCGCGGGTCAGCTACATA---CTATGCTTTGGAAGTCTGAGACGATACAATCGCAATTCCTCTA-----------
--------------------------------------------------------------------------------
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--------------------------------------
>chr4B_1_TraesCS4B01G040900
TTGGACTTAGATTTGGGGCGTGG-------CGCGCGCCGCCACGCCGTATAGAACCCTAGATCCGTCCCCCTGCAGCCGG
CTCCGGGCTTAGATTCGGCCAGGCTTCCGTTTTGC-------TGCGGCGTTGTTCTTAGCTCTACCACGCTTAGAGATCT
GGCCGGATTAGTTGCTTATTAGGGTTTTTGTTCTTCGCGTTTCTGCCTCTGCGGATTGGTAGCGACCGTCATCTTGTA--
CCCCATCCCCTTTGCATACGCATGTTCTCATCGGTTTGTGTCTCATCGGTCCT-ATATTTACATCGCTTAAGTATTATCT
TGCCTGGACGCTGGCTAGATTTGAGGCTATGTTCGATGAGAAGCACC--TTCTAGATTAGAATTGACTCACAGTGGTACA
GTTCTATGTGTATGT-----------------------------------------------------------------
--------------------------------------------------------------------------TGGTGG
AGGCTTGGTCTATCGTATTCCCTGTTCTCGAGCACACGCTATTCGTTATTGCTGTGTAGTAGTAAGAAGTAGCCTGCAGT
TCTAGATCTTCTGGATCTTGAGCTTTTTGGAGGTTTTTCGAAGCCGGACGTTGCATGGCGGTGCGCACGTAACTGCCACG
TAGCGTGTGTTTAGAATCGATCTTGAGGACCTTGAAGGCCACACGCTTTCTGCTTTTTGTAAG-TTGTAACGTTTCTCAC
TTGATATGATACACAGAGCTCGCTTTGTTTTTTTCGTTCAAAAAGAATTG-TCACGTGATTCCTGGGTTATTTCCGAATC
GGTCGACTCAT--ATATGGTATTTTTACTGTTGCTGGCATTTTTGATTAAATTGTGGAGCTTATGTGGTTATCCACTTCG
CTACCTGCCATTTTTTTCAGGTAACGTAGATCGCATGTTGGATTTAATTCTTTCAGTGTTTAACTAAAGTGACCGTGCGG
CTACTGGAATAGGTTGACATTCGTTGTCGTATTGCATTGAATGGCTCGCTTTCACGTGATTCCTGGGTTATTTCCGAATT
GGTCGACTCATATATGGTATTTTTACCGTTGCTGGCATTTTCGATTAAATTGTAGAGCTTATGTGGTTATCCACTTCGCT
ACCTGCCATTTTTTTTCCAGTTAACGTAGATCGCATGTTGGATGGATTTAATTATTTCAGCGTTCAAGTAAAGTGACTGT
GCAGCTACTGGAATAGGTTGACATACGTTGTCGTATTCCATTGAATGCCTCGCTTT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TTTTTTCCATGCAAAATCTGAAGTCAAGACT-
-----------------CCATCACTTACAT-CACTCTGACCGTTTCTTACACTTGGTAGCTTCTGTATTCCGCAGGTGAA
CTGAGTACCCAACTTTTGTCAAGATGTCTGATAGTCATGAAACCGACAAGAATATTGAGATGTGGAAGATCAAGAAGCTG
ATCAAGGGACTCGAGTCTGCTAGAGGCAATGGCACAAGCATGATCTCTCTGATTATGCCTCCACGTGATCAAGTCTCGCG
TGTGACAAAGATGTTGGGTGATGAATATGGTACTGCTTCAAACATAAAGAGTAGAGTCAATCGTCAATCTGTTTTGGGAG
CCATCACCTCAGCGCAGCAGAGGCTGAAGCTGTATAACAGGGTTCCCCCAAATGGACTAGTTCTTTACACTGGAACAATT
GTTACTGACGATGGCAAGGAAAAGAAGGTTACAATCGATTTTGAGCCATTCAAGCCCATCAATGCGTCCTTGTACCTTTG
TGACAATAAATTCCACACTGAAGCATTGAGTGAGCTCTTGGAATCCGATGACAAGTTTGGCTTCATCATTATGGATGGTA
ATGGAACTCTTTTTGGCACACTTAGTGGCAATACTCGTGAAGTGCTTCACAAGTTCAGTGTGGATCTCCCCAAGAAGCAT
GGAAGAGGAGGGCAATCTGCTCTGCGTTTTGCTCGCCTTCGGATGGAGAAGCGCCACAATTATGTTCGGAAAACAGCTGA
ACTTGCTACTCAGTTCTTC-ATCAACCCAGCTACCAGCCAGCCTAATGTTGCAGGACTAATATTGGCTGGTTCTGCTGAT
TTTAAAACAGAACTGAGCCAATCTGACATGTTTGATCAGCGCCTTCAGTGCAAGATACTTAATGTGGTTGATGTTTCATA
TGGTGGTGAGAGCGGTTTCAACCAGGCCATTGAGTTATCAGCTGAAATTCTAGCAAATGTGAAGTTCATACAAGAGAAGA
AGTTGATCGGGAAGTACTTTGAAGAGATTAGTCAAGATACTGGGAAGTATGTCTTTGGAGTTGATGACACCCTGAAGGCT
CTTGAAATGGGTGCTGTTGAAACTTTGATGGTGTGGGAAAACCTTGATGTCAATCGGTTTGTGCTTAAGCACAGTGCAAC
TGGAGAAATTATCATTAAGCATCTGAACAAAGAAGGTGAAGCCGACCAGAGCAACTTCCGTGATCCATCTACCAATGCTG
AGTTAGAAGTCCAGGAGAAGACCTCACTTCTGGAATGGTTTGCTAATGAATACAAAAAGTTTGGGTGCACCCTTGAGTTT
GTTACCAATAAATCTCAAGAGGGCTCGCAGTTCTGTAGAGGGTTTGGTGGCATTGGCGGCATCCTCCGCTATCAGCTGGA
CATTCGCTCCTTTGATGATCTTGATGACGACGAGGGTGTCTATGAAGACTCTGATTAGCAACCAATCAATCACATGCCTG
AGGCAGTCGCGGTTAAATCTGAATTTGGCGCGACTATTTGCTCCGGAGCACCTCAAAGAAGCTGTGAGTTTCGTCTCAAT
ATGCAATTAGCTTGTAATTCTATTGTCTGCTC---CATGATTTCTGAAGCTCTCCTGTTCTATTTTCAGATCCATTGGAT
GATGGGCGCGGGTCAGCTACATA---CTATGCTTTGGAAGTCTGAGACGATACAATCGCAATTCCTCTATTAAACAACGT
CGAGATGTTATCCTAAATCACAATGATGACTC-ATGTACTGAACCTTGGTTGTTACCTCCTGTTTTGCCCATGTTTTTTC
CCCAGGAACTCCTGCTTGGCTGTTGGCTGAACTGACTCTGTCTGTCTCTATGGTTCAATTTAGCAACTTGTCTGCCCTAG
TGGTAGAACATGGCAAATGTCTGCC-TGAATTTGAGTTGTTGTAAGCTACCTATTGTTGTTGTCATGCGGGAAAGGTTGA
ATTGGGATTCATTCTAGTGTGTCTTTTAACTTCCGATCTATTATCTCCGTTCTAAATTATTTGTTTTAGATTTATCTAGA
TACGGAGGTATATGTGTC--------------------------------------------------------------
TGGACAAATCTAAGTCAACTCATTTGAGATGGAGGGAGTATTTTATCATCTGCACCTGCGGTATAAAGAGCACCAA----
-----------------------AAGCAGCTGACCGGCTGAAACTTCGGCCGG----CCGCGTGAGACTAGTGCGATC--
------------CTGAAGCGCATCGTCTCCACCTTTGGAAGTGCT-----------GCCCCATAGTGCTTTTTTTCTTTC
TTTTCAACCATGCCAATGAGTTTCTC-------------------------------------------------CATGG
ATAATCATGGCGAAGGTTGCAACACCGGCGAGTGGACGACGATGTTGGAGGCAGTAATTTCTTTTTGCTACAACCGGCCG
AAGCAAGAGCTAGAACCACAGTTGATTTTTGCTGCATATAAGCAAGTTGGAACCACAGTTGGTTTTTGCTATGACCACAT
CACCTTCTTTGCTACAAGTGGGCGGCAACGACAAACGATTGTAACCGAGAGACCAGAGAGCTGCAAACCACGCTCTGAAA
AGGCTACGACTAACAACAAAAGCGACCAAGCCTGTTGGAAAAAAGCTTCAACCGGTGTGCACAAAAGTTTCAACCGGCGT
GAGAAAAAACTTCAACCTGGTGTGGAGCGATGATGCTGAGAGCTGCAGCCAGAGGCACGGTGGTGTTGCGATGGACGTCC
TGCGACGGCGGCGGCTAGGTGTTGCGTGCTACAAGATG
>chr4A_4
---GACTTAGATTTGGGGCGTGGCGGCGCGCGCCCGGCGCCATGCCGCCTAGAACCCTAGATCCGCCTCCCTGCAGCCGG
GTTCGGGCTTAGATTTGGCCAGGCTTCTTTTTTCTGCGTTTTTGCGGCGTTGTTCTTAGCTCTACTATGCTCAGAGATCT
GGTCGGATTAGTTGCTTATTAGGGTTTTTGTTTTTT-CGTCTTTGCTGCTGCGGATTGGTGGCTCCCGTAATTTTGTGCG
CCCCTTTCCCTTGGTATAGGCATGTTCTAATCGGTTTGTGCCT-ATCGGTCCT-AT-TTTACATTGTTTAAGTATGTTTT
CCCCTGGT-GCTGGCTAGATTTGATGCTATGTTCGATGAGAAGCACCACTTCTAGATTAAAATTGACTCACAATTGTACA
GTTCTATGTCTTAGGGGTGCCAGAGCGGCGTCCGATCCGCCCAGCTTTGTAGTATAAACAGATCACGTTAGCTATAATTT
CCTCATCCAAATTTAGCTTAGTTTGCACTATTTCCCTACTTATGCGGGATATGCGGGATGCCCACTTGCATCTATGTTGG
AGGCTTGGTCTATCATATTTCCTATTCTTGAGCACATGCTATTTGTTAGTGCTCGTAC-TAGTAAGAAGTAGCCTGCAGT
TCTAGATCTTCTGGATCTTGAGCTTTTTGGAGGTTTTTCGAAGCCGAACGTTGCATGGCGGTGTGCATGTAACCGCCACG
TAGCGTATGTTTAGATTCAATTTTGAGGACCTCGAACGCCACACGCTTTCTGCCTTTTGTAAGGTTATAACATTTCTTGC
TTGATATGATACGCAGAGCTCGCTTTGTTTTTTTTGTTTGAAAAGAATC-ATCACGTGATTCCTGGGCTATTTCCGAATC
GGCCGACTCATATATATGGTATTTTTACCGTTGCTGGCATTTTCAATTAAATTGTAGAGCTTAGGTGGTTATCCACTTCG
CTACCTGCCATTTTTTTCAGGTAACGTAGATCACGTGTTGGATTTAATTCTTTTAGTGTTTT------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------AAGTAAAGTGACCGT
GCAGCTACTGGAATAGGTTGACATACGTTGTCGTGTTGCATTGAATGTCTCGCTC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TTTTTCCCATGCAAAATCTAAAATCAATTTTC
TTGCAGCTCTTAGACTCCCATCACTTATCAGCACTCTGCTCATTTCTTACACTTGATAGTTTCTGTATTCTGCAGGTGAA
CTGAGCACCCAACTTTTGTCAAGATGTCTGATAGTCATGAAACCGACAAGAACATTGAGATGTGGAAGATTAAGAAGCTG
ATCAAGGGACTTGAGTCTGCTAGAGGCAATGGCACAAGCATGATCTCTCTGATTATGCCTCCACGCGATCAAGTCTCGCG
TGTGACCAAGATGTTGGGTGATGAATATGGTACTGCTTCAAACATAAAGAGTAGAGTCAATCGTCAATCTGTTTTGGGAG
CCATCACCTCAGCTCAGCAGAGGCTGAAGCTGTATAACAGGGTTCCCCCAAATGGATTAGTTCTCTACACTGGAACAATT
GTTACTGATGATGGCAAGGAAAAGAAGGTTACAATTGATTTCGAGCCATTCAAGCCCATCAATGCGTCCTTGTACCTTTG
TGACAACAAATTCCACACTGAAGCCTTGAGTGAGCTCTTGGAATCCGATGACAAGTTTGGCTTCATCATTATGGATGGTA
ATGGAACTCTTTTTGGCACACTTAGTGGCAATACTCGTGAAGTGCTTCACAAATTCAGCGTGGATCTCCCCAAGAAGCAT
GGAAGAGGAGGGCAATCTGCTCTGCGTTTTGCTCGCCTTCGGATGGAGAAGCGTCACAATTATGTTCGGAAAACAGCTGA
ACTTGCTACTCAGTTCTTC-ATCAACCCAGCTACCAGCCAGCCTAATGTTGCGGGACTAATATTGGCTGGTTCTGCTGAT
TTTAAAACAGAACTGAGCCAATCTGACATGTTTGATCAGCGCCTTCAGTGCAAAATACTTAATGTGGTTGATGTTTCTTA
TGGTGGTGAGAGCGGTTTCAACCAGGCCATTGAGTTATCAGCTGAAATTCTAGCAAATGTGAAGTTCATCCAAGAGAAGA
AGTTGATCGGGAAGTACTTTGAAGAGATTAGTCAAGATACTGGGAAGTATGTCTTTGGAGTTGATGACACCCTGAAGGCT
CTTGAAATGGGTGCTGTTGAAACTTTGATGGTGTGGGAAAACCTTGATGTCAATCGGTTTGTGCTTAAGCACAGTGCAAC
TGGAGAAATTATCATAAAGCATCTGAACAAAGAAGGTGAAGCCGACCAGAGCAACTTCCGTGATCAATCTACCAATGCTG
AGTTAGAAGTCCAGGAGAAGACCTCACTTTTGGAATGGTTTGCTAATGAATACAAAAAGTTTGGGTGCACCCTTGAGTTT
GTTACCAATAAATCTCAAGAGGGCTCACAGTTCTGTAGAGGATTTGGTGGCATTGGCGGTATCCTCCGCTATCAGCTGGA
CATTCGCTCCTTTGATGATCTTGATGACGACGAGGGTGTCTATGAAGACTCTGATTAGCAACCAATCAATCACATGCCTG
ATGTGGTCGCGGTTAAATCTGAATTTGACGTGACTATTTGCTCCGGAGCACCTCAAAGAAGCTGTGAGTTTCC--TC-AT
ATGCAATTAGCCC---GTAATTCCTTTGTCATTTGCATGATTTCTGATGCTCTCCTGTTCTATTTTCAGATCCATTGAAT
GATGGGCGCGGGTCAGCTACATATTATTATGCTTTAGAAGTCTGAGAC-ATACAACCGCAATTCCTCTATTAAAAGACGT
CAAGATGTTATCCTAAATCGCAATGATGACTCTGTGTACCGAACCTTGGTTGTTACCTCCTGTTTTGCCCATCTTTTTTC
-CCAGGAACTCATGCGTCGCTGTTGTCTGAACTGACTCTGTG----TCTATGGTTCAATTTAGCAACTTGTCTGCCCTGA
TGGTAGAACATGGCAAATGTCTGCCCTGAATTTGAGTTGCTGTAAGCTACTTATTGTTGTTGTCATGCGGGAAAGGTTGA
ATTGGGATTCATTCAAGTGTGTCTTTTAACTTCCGGTCTGTTACCTCCGTCCCAAATTATTTGTCTTAGATTTATCTAGG
TATGGATGTATATCTGTCTGGACAAATCTAAGTC----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------
>chr4D_17
GGCGTGCGC---------------------CGCTCGCCGCCACGCCGCCTAGAACCCTAGATCCGCTCCCCTGCAGCCGG
GTCCGGGCTTAGATTCGGCCAGGCTTCCGTTTCGC-------CGCGGCGTTGTTCTTAGCTCTACCGCGCTTAGAGATCT
GGTCGGATTAGTTGCTTATTAGGGTTTTTGTTTCTTGCGTTTCTGCCGCTGCGGATTGGCGGCGACCGTCATCTTGTGCC
TCGTC-TCCCTTTGCATACGCATATTCTCATCGGTTTGTGCCTCATCGGTTCAAATATTTACATTGCTGAAGTATTATTT
TTCCCGGACGCTGGCTAGATTTGAGGCTATGTTCGATGAGAAGCACCACTTCTAGATTAAAATTGACTCACAGTGGTACA
GCTCTATGTCTATGTTGCTATATTTACATTGCTTAAGTATTATTTTGCCTGGATGCTGGCTAGATTTGAGGCTATGTTCG
ATGAGAAGCACCACTTCTAGATTAGAATTGACTCACAGTGGTATAGTTCCATG-----------------TCTATGTTGG
AGGCTTGGTCTATCGTATTTCCTATGCTTGAGCACACACTATTCGTTAGTGCTGTGTAGTAGTAAGAAGTAGCCTGCAGT
TCTAGATCTTCTGGATCTTGAGCTGTTTGGAGGTTTTTCGAAGCCGAACGTTGCATGGTGGTGTGCATGTGATTGCCACG
TAGCGTATGTTTAGAATCAATTCTGAGGACCTTGAAGGCCATGCGCTTCCTGCTTTTTGTAAG-TTGTAACGTTTCTCAC
TTGA---GATACGCAGAGCTCGCTTTGTTTTTTTTTGTTCGAAAGAAATTATCACGTGATTCCTGGGTTATTTCCGAATC
GGTCAACTCAT--ACATGGTATTTTTACCGTTGCTGGCATTGGCTATTAAATTGTAGAGCTTATGTGGTTATCCACTTCG
CTACCTGCCATTTTTTTCAGGTAACGTAGATCGCATGTTGGATTTAATTCTTTCAGTG-TTT------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------AAGTAAAGTGACTGT
GCAGCTACTGGAATAGGTTGACATACGTTGTCGTATTGCATTGAATGCCTCGCTTTCACGTGATTCCTGGGTTATTTCCG
AATCGGTCGACTCATACATGGTATTTTTACCGTTGCTGGCATTTTCGATTAAATTGTAGAGCTTATGTGGTTATCCACTT
CGCTACCTGCCATTTTTTTTCAGTTAATGCAGATCGCATGTTTTCTTTCAGTGTTTAAGTAAAGTGACTGTGCAGCTACT
GGAATAGGTTGACTTACATTGTCGTATTCCATTGAATGCCTCGCTTTTTTTTTTCCATGCAAAATCTGAAGTCAAGACT-
-----------------CCATCACTTACAT-CACTCTGTTCGTTTCTTACACTTGGTAGCTTCTGTATTCTGCAGGTGAA
CTGAGCACCCAACTTTTGTCAAGATGTCTGATAGTCATGAAACCGACAAGAATATTGAGATGTGGAAGATCAAGAAGCTG
ATCAAGGGACTCGAGTCTGCTAGAGGCAATGGCACAAGCATGATCTCTCTGATTATGCCTCCACGTGATCAAGTCTCGCG
TGTGACAAAGATGTTGGGTGATGAATATGGTACTGCTTCAAACATAAAGAGTAGAGTCAATCGTCAATCTGTTTTGGGAG
CCATCACCTCAGCTCAGCAGAGGCTGAAGCTGTATAACAGGGTTCCCCCAAATGGACTAGTTCTTTACACTGGAACAATT
GTTACTGACGATGGCAAGGAAAAGAAGGTCACAATTGATTTTGAGCCATTCAAGCCCATCAATGCGTCCTTGTACCTTTG
TGACAACAAATTCCACACTGAAGCCTTGAGTGAGCTCTTGGAATCCGATGACAAGTTTGGCTTCATCATTATGGATGGTA
ATGGAACTCTTTTTGGCACACTTAGTGGCAATACTCGTGAAGTGCTTCACAAATTCAGTGTGGATCTCCCCAAGAAGCAT
GGAAGAGGAGGGCAATCTGCTCTGCGTTTTGCTCGCCTTCGGATGGAGAAGCGTCACAATTATGTTCGGAAAACAGCTGA
ACTTGCTACTCAGTTCTTC-ATCAACCCAGCTACCAGCCAGCCTAATGTTGCGGGACTAATATTGGCTGGTTCTGCTGAT
TTTAAAACAGAACTGAGCCAATCTGACATGTTTGATCAGCGCCTTCAGTGCAAAATACTTAATGTGGTTGATGTTTCTTA
TGGTGGCGAGAGCGGTTTCAACCAGGCCATTGAGTTATCAGCTGAAATTCTAGCAAATGTGAAGTTCATACAAGAGAAGA
AGTTGATCGGGAAGTACTTTGAAGAGATTAGTCAGGATACTGGGAAGTATGTCTTTGGAGTTGATGACACCCTGAAGGCT
CTTGAAATGGGTGCTGTTGAAACTTTGATGGTGTGGGAAAACCTTGATGTCAATCGGTTTGTGCTTAAGCACAGTGCAAC
TGGAGAAATTATCATAAAGCATCTGAACAAAGAAGGTGAAGCCGACCAGAGCAACTTCCGTGATCCATCTACCAATGCTG
AGTTAGAAGTCCAGGAGAAGACCTCACTTTTGGAATGGTTTGCTAATGAATACAAAAAGTTTGGCTGCACCCTTGAATTT
GTTACCAATAAGTCTCAAGAGGGCTCACAGTTCTGTAGAGGATTTGGTGGCATTGGCGGTATCCTCCGCTATCAGCTGGA
CATTCGCTCCTTTGATGATCTTGATGACGACGAGGGTGTCTATGAAGACTCTGATTAGCAACCAATCAATCACATGCCTG
AGGCAGTCGCGGTTAAATCTGAATTTGGCGTGACTATTTGCTCCGGGGCACCTCAAAGAAGCTGTGAGTTTCGTATC-AT
ATGCAATTAGCTTGTAGTAATTCCATTGTCATTTGCATGATTTCTGAAGCTCTCCTGTTCTATTTTCAGATCCATTGAAT
GATGGGCGCGGGTCAGCTACATA---TTATGCTTTAGAAGTCTGAGACGATACAACCGCAATTCCTCTATCAAACGACGT
CGAGATGTTATCCTAAATCGCAATGATGACTC-GTGTACTGAACCTTGT------------------------TTTTTCC
-CCAGGAACTCCTGCGTCGCTGTTGTCTGAACTGACTCTGTG----TCTATGGTTCAATTTAGCAACTTGTCTGCCCTAA
TGGTAGAACATGGCAAATGTCTGCC-TGAATTTGAGTTGTTGTAAGCTACCTATTGTTGTTGTCATGCGGGAAAGGTTGA
ATTGGGATTCATTCAAGTGTGTCTTTTAACTTCCGGTCTGTTACCTCCGCCCCAAATTA---------GATTTATCTAGG
TATGGATGTATATCTGTCTGGACAAATCTAAGTCATCTCATTCGAGACGCTAAGTTATTTGTCTTAGATTTATCTAGGTA
TGGACAAATCTAAGTCATCTCATTCGAGACGGAGGGAGTA-TTTATCATCTGCATCTGCAGTATAAAGAGCACCAAAAGC
TTCATCTGCATCTGCAGCACCAGAAGCAGCTGACCGGCTGAAACTTCGGCCGGGCGGCCGCGTGAGACTCGTTCGATCGT
ATCACTTGTTTGCTAAAGCGCATCGTCTCCTACCTTTGAAAGCGCTCCTGCAAGACGCCCCATTGCGCTTTTTTTTTCTC
CTTTCGATCTCCACACCGTGGTGCACAGATGCTCCTGCAACAGAGGTGCCGGGACTTTGTGCCGACAAGTCTCTGCATGG
ATGACCACGGCGAAGGTTGCAACACCGGCGAGTGGAC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr2A_1286
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------TCAAGATGTCTGAGAGCCAGGAAACTGATAGGAACATTGAAATCTGGAAGATTAAAAAGCTA
ATCAAGGCACTGGAGTCTGCTAGAGGCAATGGCACAAGCATGATCTCTCTTATTATGCCTCCACGTGATCAGGTTTCTCG
AGTGGCGAAGATGTTAGGCGACGAGTATGGTACTGCTTCAAACATCAAGAGTAGAGTCAATCGTCAATCAGTTTTGGGTG
CCATCACCTCAGCTCAGCAGAGGCTGAAGCTTTACAACAGAGTTCCTCCCAATGGTTTGGTTCTCTACACTGGAACCATT
GTTACTGATGATGGAAAGGAAAAGAAAGTTACTATTGATTTTGAGCCATTCAAGCCTATAAATGTCTCACTTTACCTTTG
TGATAACAAGTTCCACACTGAGGCTTTAAATGAGCTGTTGGAATCTGATGACAAGTTCGGCTTCATTGTTATGGATGGTA
ATGGTACACTTTTTGGCACACTAAGTGGAAATACACGTGAAGTGCTTCACAAATTTACTGTTGATCTCCCAAAGAAGCAT
GGTAGAGGAGGGCAGTCAGCTCTACGTTTTGCTCGTCTTCGGATGGAAAAACGTCATAACTATGTCCGAAAAACTGCTGA
GCTTGCTACTCAGTTTTT-TATCAATCCAGCTACAAGTCAGCCTAATGTTTCTGGACTGATTCTTGCTGGTTCTGCTGAT
TTCAAGACAGAGCTGAGCCAATCTGATATGTTTGACCAGAGACTTCAAGCCAAGATACTTAATGTGGTTGATGTTTCTTA
TGGCGGCGAGAATGGGTTCAACCAAGCTATTGAGTTGTCAGCTGAGATTCTAGCAAATGTGAAGTTCATACAGGAGAAGA
AGTTAATTGGCAAGTACTTTGAAGAGATCAGTCAAGATACTGGGAAGTATGTCTTTGGTGTTGATGACACTCTAAAGGCT
CTTGAAATGGGTGCTGTTGAGACTCTGATAGTGTGGGAGAATCTTGACATCAACAGATATTCGCTGAAGCACAGTGTCTC
TGGGGAAATTATTGTCAAACATTTGAACAAGGAGCAGGAAGCGGATCAGAGCAATTTCCGCGATAGTGAGACCAATGCCG
AGTTGGAAGTTCAGGAAAAAATATCTCTGTTGGAGTGGTTTGCTAATGAATACAAGAAGTTCGGCTGTGCGCTTGAGTTT
GTCACTAACAAGTCACAAGAGGGATCGCAGTTCTGCAGAGGATTCGGTGGCATTGGTGGTCTGCTGCGCTATCAGCTAGA
TATGCGGTCTTTTGACGAGGTTTCAGACGATGAAGGTTTGTATGAAGACTCTGATTAGCAATCAGCTAATCAAATG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr2B_1286
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------TCAAGATGTCTGAGAGCCAGGAAACTGATAGGAACATTGAAATCTGGAAGATTAAAAAGCTG
ATCAAGGCACTGGAGTCTGCTAGAGGCAATGGTACAAGCATGATCTCCCTTATTATGCCTCCACGCGATCAGGTTTCTCG
AGTGGCGAAGATGTTAGGCGACGAGTATGGTACCGCTTCAAACATCAAGAGTAGAGTCAATCGTCAATCAGTTTTGGGTG
CCATTACCTCAGCTCAGCAGAGGCTGAAGCTTTACAACAGAGTTCCTCCCAATGGTTTGGTTCTCTACACTGGAACCATT
GTTACTGATGATGGAAAAGAAAAGAAGGTTACTATTGATTTTGAGCCATTCAAGCCTATAAATGTCTCACTTTACCTTTG
TGATAACAAGTTCCACACTGAGGCTTTAAATGAGCTGTTGGAATCTGATGACAAGTTCGGCTTCATTGTTATGGATGGTA
ATGGTACACTTTTTGGCACACTAAGTGGAAATACACGTGAGGTGCTTCACAAATTTACTGTTGATCTCCCAAAGAAGCAT
GGTAGAGGAGGGCAGTCTGCTCTACGTTTTGCTCGTCTTCGGATGGAAAAACGTCATAACTATGTCCGAAAAACTGCTGA
GCTTGCTACTCAGTTTTT-TATTAACCCAGCTACAAGTCAGCCTAATGTTTCTGGACTAATTCTTGCTGGTTCTGCTGAT
TTCAAGACAGAGCTGAGCCAGTCTGATATGTTTGACCAGAGACTTCAAGCCAAGATACTTAATGTGGTTGATGTTTCCTA
TGGTGGTGAGAATGGTTTCAACCAAGCAATTGAGTTGTCAGCTGAGATTCTAGCAAATGTGAAGTTCATACAAGAGAAGA
AGTTAATTGGCAAGTACTTTGAAGAGATCAGTCAAGATACTGGGAAATATGTTTTCGGTGTTGATGACACTCTGAAGGCT
CTTGAAATGGGTGCTGTTGAGACTCTGATAGTGTGGGAGAATCTTGATATCAACAGATATTCGCTGAAGCACAGTGTCTC
TGGGGAGGTCATTGTCAAACATTTGAACAAGGAGCAGGAAGCGGATCAGAGCAATTTCCGTGATAGTGAGACTAATGCCG
AGTTGGAGGTTCAGGAAAAGATCTCTTTGTTGGAGTGGTTTGCTAATGAATACAAGAAGTTTGGCTGCGCGCTCGAGTTT
GTCACTAACAAGTCGCAAGAGGGATCACAGTTCTGTAGAGGATTTGGTGGTATTGGTGGTCTGCTACGCTATCAGCTAGA
TATGCGGTCTTTTGACGAGGTTTCAGACGATGAAGGTTTGTATGAAGACTCTGATTAGCAATCAGCTAATCAAATG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr2D_1286
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------TCAAGATGTCTGAGAGCCAGGAAACTGATAGGAACATTGAAATCTGGAAGATTAAAAAGCTA
ATCAAGGCACTGGAGTCTGCTAGAGGCAATGGCACAAGCATGATCTCCCTTATTATGCCTCCACGTGATCAGGTTTCTCG
AGTGGCGAAGATGTTAGGCGACGAGTATGGTACTGCTTCAAACATCAAGAGTAGAGTCAATCGTCAATCAGTTTTGGGTG
CCATCACCTCAGCTCAACAGAGGCTGAAGCTTTACAACAGAGTTCCTCCCAATGGTTTGGTTCTCTACACTGGAACCATT
GTTACTGATGATGGAAAGGAAAAGAAAGTTACTATTGATTTTGAGCCATTCAAGCCTATAAATGTCTCACTTTACCTTTG
TGATAACAAGTTCCACACTGAGGCTTTAAATGAGTTGTTGGAATCTGATGACAAGTTTGGCTTCATTGTTATGGATGGTA
ATGGTACACTTTTTGGCACACTAAGTGGAAATACACGTGAGGTGCTTCACAAATTTACTGTTGATCTCCCAAAGAAGCAT
GGTAGAGGAGGGCATTCGGCTCTACGTTTTGCTCGTCTTCGGATGGAAAAACGTCATAACTATGTCCGAAAAACTGCTGA
GCTTGCTACTCAGTTTTTTTATCAATCCAGCTACAAGTCAGCCTAACGTTTCTGGACTGATTCTTGCTGGTTCTGCTGAT
TTCAAGACAGAGCTGAGCCAATCTGATATGTTTGACCAGAGACTTCAAGCCAAGATACTTAATGTGGTTGATGTTTCTTA
TGGCGGTGAGAATGGTTTCAACCAAGCTGTTGAGTTGTCAGCTGAGATTCTAGCAAATGTGAAGTTCATATAGGAGAAGA
AGTTAATTGGCAAGTACTTTGAAGAGATCAGTCAAGATACTGGGAAATATGTCTTTGGTGTTGATGACACTCTAAAGGCT
CTTGAGATGGGTGCTGTTGAGACTCTGATAGTATGGGAGAATCTTGATATCAACAGATATTCGCTGAAGCACAGTGTCTC
TGGGGAAGTCATTGTCAAACATTTGAACAAGGAGCAGGAAGCGGATCAGAGCAATTTCCGCGATAGTGAGACCAATGCCG
AGTTGGAAGTTCAGGAAAAAATATCTTTGTTGGAGTGGTTTGCTAATGAATACAAGAAGTTCGGCTGCGCGCTCGAGTTC
GTCACTAACAAGTCGCAAGAGGGATCACAATTCTGCAGAGGATTCGGTGGCATTGGTGGTCTGCTGCGCTATCAGCTAGA
TATGCGGTCTTTTGACGAGGTCTCAGACGATGAAGGTTTGTATGAAGACTCTGATTAGCAA-------------------
--------------------------------------------------------------------------------
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--------------------------------------
>SNPs
SSS------------------------------S-------------SS----------------S--------------
S-------------------------------------------------------------------------------
--S-----------------------------S--S-----------S------------S----------------S--
----S-S---------------------------------S-----------------------S-------------S-
-S---------------------------------------------------------S--------------------
---------S----------------------------------------------------------------------
----------------------------------------------------------------------------S---
-------------------S---S----S-------------------S-------------------------------
----------------------------------------------S----------------S---S------------
------S-----------S--S----------------------------------------------------------
------------S---------------------S---SS---------S------------------------------
----------------------------S--------------SS----------S------------------------
-------------------------------------------------------------SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------SS------------------------------S---------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-----------------------------------S--------------------------------------------
------S-----------------S-------------------------------------------------------
----------------------------------------------------S---------------------------
-----------------------------------------------------S--------------------------
----------------------------------------------------S---------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
-----------------------------S--------------------------------------------------
-----------------------------------------S-----------------S--------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------S--S--
----------------S-SS-SSSS-SSS-SS---------------------------------------------S--
--------------------------S--------S-------------------S-------------------S----
-------------------S-------------S--------------------------------------S-------
S--------------S-S-------S---------------SSSSS---------------------------------S
--------------------------------------------------------------------------------
--------------S--------------------S---S---S------S-S-----------S--------------S
--S---S------S------------------------------------------------------------------
-----------------S------S----S----------S-------------S----S--------------------
---------------------------------------------------------------------S--S-------
--------------S---------------SS-S--S---SSSSS------------------S-S---------S-S--
S----S-S-SSSS--SS-S-S-S-S-------------------------------------------------------
--S-S--S-----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1102
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------------------------------------------GGCTCGCTTTCACGTGATTC------------------
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--------------------------------------
>reverse_2213
--------------------------------------------------------------------------------
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----------------------------------------------------GTTCAGTGTGGATCTCCCCA--------
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--------------------------------------
>forward_1103
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GCTCGCTTTCACGTGATTCC-----------------
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--------------------------------------
>reverse_2478
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------ATA
TGGTGGTGAGAGCGGTT---------------------------------------------------------------
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--------------------------------------
>forward_1165
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CCGTTGCTGGCATTTTCGAT-----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------
>reverse_3376
--------------------------------------------------------------------------------
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---------------TTGGCTGTTGGCTGAACTGA---------------------------------------------
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--------------------------------------
