>input_sequence_42359
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--------------------------------------------------------ATGCCCCCGAACTCGACGCCGCAG
CGCCGCGCGCAGCAGCAG------CA---------CCGCCCCGTCA---CCGGCGGCGG---------CAGGAGCCAGGA
GGCGGCCAT---GGCGGC---GGCGTGCGACGAGGAGGCGTTCCAGGAGGTGGACCCGACGGGGCGGTTCGGGCGGTACG
CGGCCGTGCTGGGGCTCGGCTCCGTCAAGAAGGTGTACCGCGGGTTCGACCAGGAGGAGGGCATCGAGGTGGCGTGGAAC
CGGGTGCGCCTGCGCGCGCTGGCGGAGCGCGACCCCTCCATGGTCGACCGCCTCCACGCCGAGGTGCGCCTCCTCCGCTC
CCTCCACCACGACCACATCATCGGCTTCCACAAGGTCTGGCTCGACCGCGACGCCGGCGTGCTCAACTTCATCACCGAGG
TCTGCAACTCGGGCAGCCTCCGCGAGTACCGCGACCGGCACAAGCACGTCTCCCTCAAGGCGCTCAAGAAGTGGGCGCGC
CAGATCCTCGAGGGCCTCGACCACCTCCACACCCACGACCCCTGCATCATCCACCGCGACCTTAACTGCAGCAACGTCTT
CATCAACGGCAACACCGGCCAGGTAACAAACACCT-----CTATACCTGCGCCC----ATCAATC-------------TA
AT-----------------TGCCTTTCCTCGCACAGTTCTTCAATTGATTGAACAATTCAA---TATCTGCAATCTCCCA
AATTTTATATTTAGAACTGCGTATGCT---AGACTCTCGCCTTCCCGCGCACCACGCCGTTTCGCATAATTTAA-----T
TTAATCGTTTCTAAAAAGAATTTAATTTAATCTTGTTTTAATTAGATTGGAATACTCCTAGATACTGCATGTATTCGGTT
TTAATTAGATTCTGAATTGGGGATAAACATAATTCTTACTTACTACTTTCTCAATACTATCGTAGTTTTGTGCCTAAACA
GGCAATTTGGGGTAGGAAAGTAGCACACGATGTAGTTTAGTGCTAAACATAATTTTTACTTGT-----------------
-------------------------TACTATCTTAGTT------------TTTTTTATTTGCCTAAATGGGCAATTTGGG
GTAGGACAGTAGCACA-CGATGTAGTTTAATGC-----------------------------------------CTGTTG
ATCTGAACACCGACCCGTGCATTAGGCCGGCGATTAATCCGCGGACGGGCGCTTTTCCCACCTTTTGCGCTTCTTTTCTG
TGACGACCTAGCTGTAGTGTAGACCTCTGTAGCTCTCCGTGTCTCCAAAAGCATCGCGAGAACTGGACCTACTACTAGGA
TATATGCTTGCGTGAGCTGCACCTAGCTTTCGAGTAAAGGAGAAACACAACTGATGCACGTTGAGATGCACTTTGT-TTT
GCTTTCAAACATACATAGCTGAGTCGCACTCCGATCTGCTACGCTAACTTGTTCAGTTGCTTGCTTGCTTGCTGCACCTG
CATGCGTTTACGATCCTGCCCCGATCGAGCACTAGCTGTTAGCTGTTGCTTTCGGGAT--------CTGTTGGACTGACG
GCTCGCTCCGGGGATTGGTGGTGCAGGTGAAGATCGGCGACCTCGGGCTGGCGGCGATCGTGGACAAGGACCACACGGCG
CACACGATCCTGGGCACGCCCGAGTTCATGGCGCCGGAGCTCTACTCGGAGACGTACACGGAGTCGGTGGACATCTACTC
GTACGGGATGTGCGTGCTGGAGATGGTGACGCGGGAGATGCCCTACGGCGAGTGCGAGAGCGTGGTGCAGATCTACCACA
GCGTCACCAACGGCGTGCCGCCCGCCGCGCTCCGCCGCCTCAGGGACCCGGAGATGCGGGCCTTCATCCAGCGCTGCATC
GGCAAGCCGCGGAACCGCCCCTCCGCGGCCGACCTCCTGCGGGACCCTTTCTTCCACGGCATCGACGACGACACCACCGG
CACGCTCAGCTAG-------------------------------------------------------------------
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--------------------------------------------
>chr2D_1_TraesCS2D01G197600
ACTTCTCTCTAATAGCTACCTAATAACAACCTAAATTAACCCCCCAAAACCCCCAAACCCCCCCTAAAAAAAAACAAAAA
CCTCAGCTCCTGCCAGGTGCTGACGCGTGGATGCCTATTGGTCCCGGTTGGTGGCACGAACCGGGACCAAAGGCCCTCCT
GCCTGGGCTCCCCGCACCGGCCACGTGGACGGCCTTTAGTCCCGGTTCGTGTAAGAACCGGGACTAAAGGGCTAGGGCAT
TAGTAACGACCCTTTAGTCCCGGTTCCTGAACCGGGACTAAAGGCCCTTATGAACCGGGGTAAAAGCCTCTTTTCCTACT
AGTGGGAAGGAATTTTCTTTTTTTTTCCTTTATGAAGGGATTACAGTTGCCGGGCCGTTGGACCCGAAGTCTAACACGGC
AACACCGCATGGCCCGGTTACACCCACCTCGGTTGGACCTTCCAATCCAATTGGCTACATTTCTAAAAAAATAATCCAGT
CGGCTACAACCCTT---AAAAAAAGGCAATTGGCTACAAAGTAGCCAG------ATAAGTAAAAGAAAAGTCAAACGCTA
CTAAGAGGGTCAAACCGACGAACTACGTGGGCGCGTGACAATCGGTTTAACAAGTCCGGATCACCATCAGCGCAGAAACA
AACAAACAAATCCTCGAG---TAAACAAACAGAAACGAGCAAACGGGATTCCTCCACAGTCCACGCGGCGTCGTGAACCA
GACGAACCGCCCAGCCGACGGACGCGCCGACCTCCTCCGATCCACACGGCACGCCAACGTGGCCCAGCCCAACAGCCAGT
CGGCCCGCACAATCCGAGTCATACCGGCCCCCA----TACTGTCGTACGCGCGCACGTGTAGCAATACGCAACAACTACG
CCACCGAGCCCGTGCCGCTCTCGGCTGGCTCCTCCCGGTGAAGGCCGCTGCCGCGCGCACCGCACAACCACCTCCCCTAT
ATATAGCGTCCGCCCCGATCGGCCTCAGCTTCGCTCGCCTCCCGCCCGCTTTCCGCATGCCCCCGAACTCGACGCCGCAG
CGCCGCGCGCAGCAGCAG------CA---------CCGCCCCGTCA---CCGGCGGCGG---------CAGGAGCCAGGA
GGCGGCCAT---GGCGGC---GGCGTGCGACGAGGAGGCGTTCCAGGAGGTGGACCCGACGGGGCGGTTCGGGCGGTACG
CGGCCGTGCTGGGGCTCGGCTCCGTCAAGAAGGTGTACCGCGGGTTCGACCAGGAGGAGGGCATCGAGGTGGCGTGGAAC
CGGGTGCGCCTGCGCGCGCTGGCGGAGCGCGACCCCTCCATGGTCGACCGCCTCCACGCCGAGGTGCGCCTCCTCCGCTC
CCTCCACCACGACCACATCATCGGCTTCCACAAGGTCTGGCTCGACCGCGACGCCGGCGTGCTCAACTTCATCACCGAGG
TCTGCAACTCGGGCAGCCTCCGCGAGTACCGCGACCGGCACAAGCACGTCTCCCTCAAGGCGCTCAAGAAGTGGGCGCGC
CAGATCCTCGAGGGCCTCGACCACCTCCACACCCACGACCCCTGCATCATCCACCGCGACCTTAACTGCAGCAACGTCTT
CATCAACGGCAACACCGGCCAGGTAACAAACACCT-----CTATACCTGCGCCC----ATCAATC-------------TA
AT-----------------TGCCTTTCCTCGCACAGTTCTTCAATTGATTGAACAATTCAA---TATCTGCAATCTCCCA
AATTTTATATTTAGAACTGCGTATGCT---AGACTCTCGCCTTCCCGCGCACCACGCCGTTTCGCATAATTTAA-----T
TTAATCGTTTCTAAAAAGAATTTAATTTAATCTTGTTTTAATTAGATTGGAATACTCCTAGATACTGCATGTATTCGGTT
TTAATTAGATTCTGAATTGGGGATAAACATAATTCTTACTTACTACTTTCTCAATACTATCGTAGTTTTGTGCCTAAACA
GGCAATTTGGGGTAGGAAAGTAGCACACGATGTAGTTTAGTGCTAAACATAATTTTTACTTGT-----------------
-------------------------TACTATCTTAGTT------------TTTTTTATTTGCCTAAATGGGCAATTTGGG
GTAGGACAGTAGCACA-CGATGTAGTTTAATGC-----------------------------------------CTGTTG
ATCTGAACACCGACCCGTGCATTAGGCCGGCGATTAATCCGCGGACGGGCGCTTTTCCCACCTTTTGCGCTTCTTTTCTG
TGACGACCTAGCTGTAGTGTAGACCTCTGTAGCTCTCCGTGTCTCCAAAAGCATCGCGAGAACTGGACCTACTACTAGGA
TATATGCTTGCGTGAGCTGCACCTAGCTTTCGAGTAAAGGAGAAACACAACTGATGCACGTTGAGATGCACTTTGT-TTT
GCTTTCAAACATACATAGCTGAGTCGCACTCCGATCTGCTACGCTAACTTGTTCAGTTGCTTGCTTGCTTGCTGCACCTG
CATGCGTTTACGATCCTGCCCCGATCGAGCACTAGCTGTTAGCTGTTGCTTTCGGGAT--------CTGTTGGACTGACG
GCTCGCTCCGGGGATTGGTGGTGCAGGTGAAGATCGGCGACCTCGGGCTGGCGGCGATCGTGGACAAGGACCACACGGCG
CACACGATCCTGGGCACGCCCGAGTTCATGGCGCCGGAGCTCTACTCGGAGACGTACACGGAGTCGGTGGACATCTACTC
GTACGGGATGTGCGTGCTGGAGATGGTGACGCGGGAGATGCCCTACGGCGAGTGCGAGAGCGTGGTGCAGATCTACCACA
GCGTCACCAACGGCGTGCCGCCCGCCGCGCTCCGCCGCCTCAGGGACCCGGAGATGCGGGCCTTCATCCAGCGCTGCATC
GGCAAGCCGCGGAACCGCCCCTCCGCGGCCGACCTCCTGCGGGACCCTTTCTTCCACGGCATCGACGACGACACCACCGG
CACGCTCAGCTAGCAGCG----CCTTTGAC-----------CGGATAATGTAGCAGTGTTAACTTCTCCGTGTTGTTGTT
AATGGTTCGCTACTTAGCTAGTAGTAGAAGGGCGACGCTGAGTCCAAATGATTGTTTGATTTGTGCTCCAGCAAGCAAGC
GAGC----AAAATGTGTAAAGATCATGCATGGTCTCGACGGAATTCGTCTGGGCCAGTCTGTATTCTTATTGTTGCATTC
CAGTAGTACAGTATTCTTATTGAGAAGGCATCATGGGCTCATGGCAATTAATAACTGTTCACCTGAATACAAATGAGGAA
TGAGCCAGCGTGTTCTCTTCAGAACCTTGACGCATTTTGTTTCTATTTTTACCGAGAAGAAAGACGCCGACACAAAATGC
TACTT---------------------------------------------------------------------------
------------------------------------------------------GTACATATTTGCTATGAGGATCTCAA
CGAAG------------------CAACCGGGCCCTGTTTCTAC-------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------AAGTAGCATCCAACTCGCAGAAAGG
TTTCATTA-CGCAAGAAACAATCACGAATTAAGGCAGAGGAGACGGCTAGCC-------CCTGAGCCAAGGAGTACATGT
T-CTGAAATAAGAAATCAAATGCTTGCACCCAACT---------------CGTTTAAAAAGAACAACTTGTTCAGATTGC
ATCTATCCACTCCACCGTCCAACTTTTGCACTGGGACTTCACGCAAGATGAGGCGCTGCGCATGGGGCATGGCTACAAGT
GGAGTACAGTTATTGCGTAGACTCGTTGAAGAACCGGCTTCTGGGGAAAAAACCTGGAAGAGTACCA----AAATCAGCT
GGAGACATCTGGAAAGAAAATAAGCTGGACCTAGACGGGAGACCCAACTGATACACTGGATATGGGCACT--TTTTTTTG
TTCCTTGAGCGTGGGGAGCATGACG-ATCGATGGACAACTCACACCCTGCATTGCGCACAGACTGTCCGGCAACCTGACG
CGTCCAAGGCCACAGAAATTAAGATGGTGCTGTTGGTGCGTCCGTTGGGTGGTGGATGATGGGGCAT-------------
---------TTAGCCAAGCGCGGCCTTGCTGTTCGAACGACGTC
>chr2A_468
AAAAAAG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------CCATT
TGGCTACAATCCTTCGGAAAAAAGGGCAATTGGCTACAAACTGGTAGGCAGATTATAAGTAAAAGAAAAGTTAAACGCTA
AGAA---GGTCAAACCGACGAACTACGTGGGCGCGTGACAATCGGTTTAACAAGTCCGGATCATCACCAGTGCAGAAACA
AACAAACAACCCGTCGAC---TAAACAAACAGAAACGAGCAAACGGGATTCCTCCACAGTCCACGCGGCGTCGTGAACCG
GACGAACCGCCCAGCCGACGGACGCGCCGACCTCCTCCGATCCACACGGCACGCCAGCGTGGCCCAGCCCAACAGCCAGT
CGGCCCGCAAAATCCGGGTCATACCGGCCCCCATACGTACGTACGTACGCGCGCACGTGTAGCAATACGCAACAACTACG
CCACCGAGCCCGTGCCGCTCTCGGCTGGCTCCTCCCGGTGAAGGCCGCTGCCGCGCGCACCGCACAACCACCTCCCCCAT
ATATAGCGCCCGCCCCGATCGTCCTAAGCTTCGCCCGCCTCCCGCCCGCCTTCCGCATGCCCCCGAACCCGACGCCGCAG
CGCCGCGCGCAGCAGCAG------CAGCACCACCACCGCCCCGTCACCGCCGGCGGCGG---------CAGGAGCCAGGA
CGCGGCCAT---GTCGGCTTCGGCGTGCGACGAGGAGGCGTTCCAGGAGGTGGACCCGACGGGGCGGTTCGGGCGGTACG
CGGCCGTGCTGGGGCTGGGCTCCGTGAAGAAGGTGTACCGCGGGTTCGACCAGGAGGAGGGCATCGAGGTGGCGTGGAAC
CGGGTGCGCCTGCGCGCGCTGGCGGAGCGTGACCCCTCCATGGTCGACCGCCTCCACGCCGAGGTGCGCCTCCTCCGCTC
CCTCCACCACGACCACATCATCGGCTTCCACAAGGTCTGGCTCGACCGCGACGCCGGCGTGCTCAACTTCATCACCGAGG
TCTGCAACTCGGGCAGCCTCCGCGAGTACCGCGACCGCCACAAGCACGTCTCCCTCAAGGCGCTCAAGAAGTGGGCGCGC
CAGATCCTTGAGGGCCTCGACCACCTCCACACCCACGACCCCTGCATCATCCACCGCGACCTTAACTGCAGCAACGTCTT
CATCAACGGCAACACCGGCCAGGTAA--------------------CTGCGCCCATCAATCAATCAATCTCGATCGGTCG
CCTGGCT---GCTAATTGCTGCCTCTCCCCGCACAGTTCTTCAATTG-TTGAACGATTAAA---TATCTGCAATCTCCCA
AATTTTATATTTAGAACTGCGTTATGCTAGACTCTCTCGCCTTCTCGCGCACGACGCCGTTTCGCATAATTTAATTTAGT
TTAATCGTTTCTAAAAAGAATTTAATTTAATCTTGTTTTAATTAGATTGGAATACTCCTAAATACTGCATGTATTCGGTT
TTAATTAGATTCTGTATTGGGGATAAACATAATGTTTACTTACTACTTTCTCAATACTATCGTAGTTTTGTACCTAAACA
GGCAATTTGGTGTAGGAAAGTAGCACACGATGTAGTTTTGTGCTAAACATAATTTTTACTTTTTTTGCATGGAAACATAA
TTTTTACTTGCTACTAATACCTCAATACTATCTTAGTT------------TTTTTTTC-TGCCTAAATAGGCAATTTGGG
GTAGAACAGCAGCACAAAGATGTAGTTTAATGC-----------------------------------------CTGCTG
ATCTGAACACCGACCCGTGCATTAGGCCGGCGATTAATCCGCGGACGGGCGCTTTTCCCACCTTTTGCGCTTCTTTTCTG
TGACGACCTAGCTGTAGTGTAGACCTCTGTAGCTCTCCGTGTCTCTGAAAGCATCGCGAGAGCTGGACCTACTAGGAGGA
TATATGCCTGCGTGAGCTGCACCTAGCTTTCGAGTAAAAGAGAAACACAACTGATGCACGCTGAGACGCACTTTGTTTTT
GCTTTCAAACATACATAGCTGAGTCGCACTCCAATCTCTTACGCTAACTTGTTCAGTTGCTTGCT--------GCACCTG
CATGCATCTACGATTCTGCCCCGATCGAGCACTGGCTGTTAGCCGTTGCTTTCATGAATCACGAGCCTGTTGGACTGACG
GCTC----CGGGGATTGGTGGTGCAGGTGAAGATCGGCGACCTCGGGCTGGCGGCGATCGTGGACAAGGACCACACGGCG
CACACGATCCTGGGCACGCCCGAGTTCATGGCGCCGGAGCTCTACTCGGAGACGTACACGGAGTCGGTGGACATCTACTC
GTACGGGATGTGCGTGCTGGAGATGGTGACGCGGGAGATGCCCTACGGCGAGTGCGAGAGCGTGGTGCAGATCTACCACA
GCGTCACCAACGGCGTGCCCCCCGCCGCGCTCCGCCGCCTCAGGGACCCGGAGATGCGGGCCTTCATCCAGCGCTGCATC
GGCAAGCCACGCAACCGCCCCTCCGCCGCCGACCTCCTGCGGGACCCTTTCTTCCACGGCATCGACGACGACACCACCGG
CACGCTCAGCTAGCAGCTAGCCCCCGGTCGCGAGGGTGGATCGGATAATGTAGCAGTGTTAACTTGTCCACCTTGTTGTT
AGTGG--------TTAGCTAGTAGTAGAAGCACGACGCTGAGTCCAAATGCTTGTTTGATTTGTGCTCCAGCAAGCAAGC
GAGCGAGCAAAATGTGTAAAGATTATG-ATGGTCTCGACGGAATTCGCCTGGGCCAGTCTGTATTCTTATTGTTGCATTC
CAGTAGTATTAC------ATTGATAAGGCATCATGGGCTCGTGCCAATTAATAACTGTTCACCTGAATACAAATCAGGAC
TGAGCCAGCGTGTTCTCTGCAGAACCTTGACGCATTTTGTTTCTATTTTTACCGAGACGGAAGATGCCGACACTAAATGC
TACT----------CCCTCCGTTCGGAAATACTTGTCATCAAAATGGATGAAAGGGGATGCATCTAGACATATTTTAGTT
CTAGATACACCTTTTTCTATCCATTTTGATGACAAGTATTTTCGGACGGAGGGAGTACCTATTTGCTATGAGGATCTCAA
GTTCTCAACGAAGCAAC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CGGCTAGCC-------CCTGAGCCAAGGAGTACATGT
TTCTGAAATAAGCAATCAAATGCTTGCACCCAACTTGTTCATATTTCTCGT-TTAAAAAGAAAAAACTTGTTCAGATTGC
ATCTATCCACTCCACCGTCCAACTTTTGCACTGGGACTTCACGCAAGATGAGACGCTGT-------GCATGGCTACAAGT
GGAGTACAGTTATCGTGTAGACTCGTTGAAGAACCGGCTTCTGGGGAAAACACACACCTGGATGATTACCGAAATCAGCT
GGAGACGTCTGGAAAGAAAATAAGCTGGACGTAGACGGGAGACCCAACTGATACACTGGATATGGGCA----TTTTTTGG
GTTCCTTAGCGTGGGGAGCATGACGAATCGATGGACAACTCACACCCTGCATTGCGCACAGGCTGTCCGGCGACCTCAAG
CGTCCAAGGCCACAGAAATAAATA---------------------TGGGTGGTGGATGATGGGGCATCGGCGTCGTAACA
GCTGGGCATTTAGCCAAGCGCAACCTTGCTGTTCGAACCACGTC
>chr2B_608
CGGATCACCG----------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------TCATCAGCGCAGAAACA
AACAAACAAATCATGGAGTAATAAACAAACAGAAACGAGCAAACGGGATTCCTCTACAGTCCACGCGGCGTCGTGAACCA
GACGAACCGCCCAGCCGACGGACCCGCCGACCTCCTCCGATC-ACACGGCACGGCAAAGGGGCCCAACCCAACGTACGCT
ACCGAGTC-AAATCCGGGTCAAAT---CCCCCA----TACGTACGTACGCGCGCACGTGTAGCAATACGCAACAGCTACG
CTACCGAGCCCGTGCCGCTCTCGGTTGGTTCCTCCCGGGGAAGGCCGCTGC----CGCACCGCACAACCACCTCCCCTAT
ATATAGCGGCCGCCCCGATCGGCCTCAGCTTCGCTCGCCTCCCGCCCGCTTTCCGCATGCCCCCGAACTCGACGCCGCAG
CGCCGCGCGCAGCAGCAGCACCACCA---------CCGCCCCGTCA---CCGCCGGCGG---------CAGGAGCCAGGA
GGAAGCCATGTCGGCGGT---GGCGTCCGACGAGGAGGCGTTCCAGGAGGTGGACCCGACGGGGCGGTTCGGGCGGTACG
CGGCCGTGCTGGGGCTCGGCTCCGTCAAGAAGGTGTACCGCGGCTTCGACCAGGAGGAGGGCATCGAGGTGGCGTGGAAC
CGGGTGCGCCTGCGCGCGCTGGCGGAGCGCGACCCCTCCATGGTCGACCGCCTCCACGCCGAGGTGCGCCTCCTCCGCTC
CCTCCACCACGACCACATCATCGGCTTCCACAAGGTCTGGCTCGACCGCGACGCCGGCGTCCTCAACTTCATCACCGAGG
TCTGCAATTCCGGGAGCCTCCGCGACTACCGCGACCGGCACAAGCACGTCTCCCTCAAGGCGCTCAAGAAGTGGGCGCGC
CAGATCCTCGAGGGCCTCGACCACCTCCACACCCACGACCCCTGCATCATCCACCGCGACCTCAACTGCAGCAACGTCTT
CATCAACGGCAACACCGGCCAGGTAACAAACACCTCTATACTATACCTGCGCCC----ATCAATCAATCTCGATCGGTCG
CCTGGCCCTCGCTAATTGCTGCCTTTCCTCTCACAGTTCTTCAATT----AAACAATTATTGAGTATCTGCAATCTCCCA
AACTTTATATTTAGAACTGCGCTATACTAGAGACTCTCGCCTTCTCGCGCACGACGCCGTTTCGCATAATTTAATTG-GT
TTAATCGTTTCTAAAAAGAATTTAATTTAATCTTGTTTTAGTTAGATTGGAATACTCCTAGATAATGCATGTATCCGGCT
TTATTTAGATTCTGAATTGGTGATAAACATAATTTTTACTTATTACTTTCTCAATACTATCATAGTTTTGTGCCTAAGTA
GGCAATTTGGGGTAGAACAGTAGTGGACGATGTAGTTTACTGCTAAACATAATTTTTACTTGC-----------------
-------------------------TACTAATACCTCAATACGATATTAGTTTTTTTTTTGCCTAAATAGGCAATTTGGG
GTAGAACAGTAGCACA-AGATGTAGTTTAATCCCTCGCAAAAAAAAAAACAAGATGTAGTTTAATGCCTGTTGTCTGTTG
ATCTGAACACCGCCCCGTGCATTAGGCCGGCGATTAATCCGCGGACGGGCGCTTTTCCCACCTTTTCCGCTTCTTTTCTG
TGACGACCTAGCTGTAGTGTAGACCTCTGTAGCTGTCCGTGTCTCTGAAAGCATCGCGAGAACTGGACCTACTAGGATAT
AT-----------------------GCTTTCAAGTAAAGGAGAAACACAAGTGATGCACGTTGAGACGCACTTTGTTTGC
TTT------CAAACATAGCCGAGTCGCACTCTGATCTGTTACGCTAACTTGCTCAGTTGCTTGCT--------GCACCTG
C----ATCTACGATTCTGCCCCGATGGAGCACTAGCTGTTAGATGTTGCTTTC-------ACGATCCTGTTCGGCTGACG
GTTC----TGGGTACTTG-GGTGCAGGTGAAGATCGGCGACCTCGGGCTGGCGGCGATCGTGGACAAGGACCACACGGCG
CACACGATCCTGGGCACGCCCGAGTTCATGGCGCCGGAGCTCTACTCGGAGACGTACACGGAGTCGGTGGACATCTACGC
GTACGGGATGTGCGTGCTGGAGATGGTGACGCGGGAGATGCCCTACGGCGAGTGCGAGAGCGTGGTGCAGATCTACCACA
GCGTCACCAACGGCGTGCCGCCCGCCGCGCTCCGGCGCCTCAGGGACCCGGAGATGCGGGCCTTCATCCAGCGCTGCATC
GGCAAGCCGCGGAACCGCCCCTCCGCCGCCGACCTCCTGCGGGACCCTTTCTTCCACGGTATCGACGACGACACCACCGG
CACGCTCAGCTAGCAGCG----CCCGGTGGCGAGGGTGGATCGGACGTAGTAGCAGTGTTAACTTCTCCGTGTTGTTGTT
AGTGG--------TTAGCTAGTAGTAGAAGCACGACGCTGAGTCCAAATGATTGTTTGATTTGTGCTCCAGCAAGTAAGC
GAGC----AAAATGTGTAAAGATCATGCATGGTCTCGACGGAATTCGTCTGGGCCAGTCTGTATTCTTATTGTTGCATTC
CAGTGGTACAGTATTCCTATTGAGAAGGCATCATGGCTCATGAACAATTAATAACTGTTCAACTGAATACAGATGATGAA
TGAGCCAGTATGGGCTCTTTAGAACCTTGACGCATTTTGTTTCTATTTTTACCGAGAAGAAAGATGCCGACACGAAATGC
TACTTGTATGTACTCCCTCTGTCTGGAAATACTTATCATCAAAATGAATAAAAGGAGATGTATCTAGATGTATTTTAGTT
CGAGATACATCTCTTTTTATCCATTTTGATGACAAGTATTTTCGGACGGAGGGAGTA----TTTGCTATGAGGATCTCAA
CGAAGACACGATTTCCAGTCTTGCAACCGTGCCCTGTTTCTATAAGGCCTTGTACAATGAGAGATGCTTAGAAAAATAAA
CCGAGTTCTTTTAAGTACCGGTGCCTATTTCTACACGAGAGACGCTTAGTTAAGCGTCTATCTTGTACAAATAAGCATCG
GTGCTTAAGAAAAACCTGGTTTATTTCTCTAAGCACCTTGCATTGTACGAAGCCTAAGTAGCATCCAACTCGCAGAAAAA
GTTTCACTGCGCAAGAAACAGTTACGAATTAAGGCAGAGGAGACGGCTAGCCCCTGAGGCCTGAGCCAAGGAGTACATGT
TTCTGAAATAAGCAATCAAATGCTTGCACCCAACTTGTTCATATTCTTCTCGTTTAAAAATATAAACTCGTTCAGATTGC
ATCTATCCACTCCACCGTCCAACTTTTGCACTGGGACTTCACGCAAGATGAGACGCTGT-------GCATGGCTACAAGT
GGAGTACAGTTATTGCGTAGGCTCGTTGAAGAGCCGGCTTCTAGGGAAAAAACCTGGAAGAGTACCA----AAATCAGCT
GGAGACGACTGGAAAGAAAATAAGCTGGACGTGGACGGGAGGCCCAACTGATACACTGGATATGGGCACTTTTTTTTTTG
TTCCTTGAGCGTGGGGAGCATGACGA-TCGATGGACAACTCACACCCTGCATTGCGCACAGACTGTCCGGCAA-CTGACG
CGTCCAAGGCCACAGAAAT-AAGATGGTGTTGTTGGTGCGTCCGTTGGGTGGTGGATAATGGGGCAT-------------
--------------------------------------------
>chr1B_982
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------CCTCCCGTTCACTTT--GCATGACCCCAAACCCAACCCCGCCG
CGCCGCGCGCAACAGT---------A---------CAACCCCGTCA---TCCACGGCAAGAGGAAGATCAGCAGCCAGGA
GGCCACGGC---GGCGGCACCCGACGAG-----GGGGGCGTTCCAGGAGGTGGATCCGATGGGGCGGTTCGGGCGGTATG
CGGCCGTGCTC-GGCTCGACTCCGTCAAGAATGTCTATCGCG-GTTCGACCAGGAGGAGGGCATCGAGGTGGCGAGGAAC
CGGCTGCGCCTGCACAG----------------CCCGCCATGGTCGATCGCCATCACGCCGAGGTGCGCCGCCTTCGCTC
CCTCCACCACGACCACATCGTCGGCTTCCACAAGGTCTGGCTCGATTGCGACGCCGGCATGCTCAAGTTCATCACCGAGG
TCTGCAACTCAGGGAGCTTCCGCGAGTACCGCGACCGCCACAAGCACGTCTCCGTCAAGGCGCTCAAGAAGTGGGCGCGC
CAGATCCTCGAGGG---------CCTCCACATCCACGACCTCTGCATCATCCACCGCGACCTTAATTGCAGCAACGTCTT
CTTCAACTGCAAGTCCGGCCATGTAA-----------------TACCTGCGCCCATCAATCAATCTTGCTTGCCTACCTA
AT-----------------TGCCTCTCCTCGCACACTTCTTCAATTG-TTAAACAATTAAA---TATCTGCAATTCCAAA
AAAAATGTAATTAGAACTGCGTTAAGCTGAACTCTC--------------------------------------------
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>SNPs
-SSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-
S--------S-------------S----------------S-S-SSS------------------------S--------
SS--SSS--------------------------------------------------------S----------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S------S-----------------------SSS-------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S----------S---------------------
----------------------SSSSS-----------------S-------S---------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------S-----------
----S------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------SS---------------------------SS----
-------S----------------------------------------------------------S-------------
--------------------------------------S--------------------------SSSSSSSS-------
-----S-S------S--------------------------------------SS--S----------------------
----SSSS------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
------------------------SSSSSS--------------------------------------------------
-S---SSSSSSSS-----------------SS------------------------------------------------
--------------------------------------------------------------------------------
----------------S-----------------------S--S------------------------------------
----------------------------------------------------------------S--------S------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
-----------------------------S------------S-------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------SS
S--SSSSS------------S-S---------------------------------------------------------
------------S-----------------------------------------------S--S----------------
----------------------------------------------------S-----SSSSSSSS--------------
--------------------------------------------------------------------------------
------S-----------------------S-------------------------------------------------
--------------------------------------------------------------------------------
-------------------S---------S--------------------------------------------------
---------------------SS---------------S-----
>forward_299
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---------------------------------------AAAGGCCCTTATGAACCGGG---------------------
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>reverse_2149
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--------------------------------------------------------------------GGGCAATTTGGG
GTAGGACA------------------------------------------------------------------------
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--------------------------------------------
>forward_374
--------------------------------------------------------------------------------
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----------------------------------AAGGGATTACAGTTGCCGGG--------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_2566
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GTTTACGATCCTGCCCCGAT-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_2367
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TGTAGCTCTCCGTGTCTCCA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_4066
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GGCATGGCTACAAGT
GGAGT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
