>input_sequence_42326
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---------------------------------------------------------ATGGCCATGGCCGCCGCCTCCCC
GTTCCTCCTCCTGCAACCTCTAGCCCCCAAGCCCCATCGTCCTCTCGGTCCCCTACACCCCAGCCTCCTCCGGACCCGCC
TCCTCCGCTGCTCGCCCAATGGTGCGGCGGAGCCGGAA---CCTCCTAAACCCACCCCACGCCGCGGGCGGAAGAAGGCG
TCGGAGCCGGGCTCGTCGCCGCCGAAGGCGAAGGCGACGAGGCGCAAGACCAAGAAGGCGGGGCAGGAGTCGGACTCGGA
GGGCGAGGAGGAGCCGGCTGCGAAGCCGAGGGCCCGTCGGACCAAGAAGTCCCCGAAGCAGGAGGCCAAGCAGCAGC---
AGGGGGAGGAGGATGCCCAGGCGGAGGAGCCTCGGAGTGCGGCCCGCGAGGAGGACGCGGGAGACGACGGCGGCGACGGG
GCGGATTTGCCGTACGAGTGGCCGCCGCTGGTATGCTGCTTCGGGGCGCCGCGGTGGGAGTTCGTGCCTACGGTGCGGGT
GTCGGACCAGCAGATGCACCCCGACCAGTACTCCACCTGGCTGCACCTGCAGTGGGAGCCGCCCGAGTTCGCGCGCTCGC
CCGGGAGCGCCTCCAGCAACGTCGCCATCGCGCTCACGCGGCTCGGCGGCCGCGCCGCGGTGCTCGGCAAGGTCGGCGAC
GACGACTTCGGCCACGAGCTCGTGTACCGCATGAACCGCGAGCGGGTGCAGACGCGCGCCATCAGGTTTGACGGCGCCGC
GTCCACAGCCATCGCCCGGATGAAGGTGGCGTTCCGGGACAAAGAGGACGGCGAGGGCGGGACATGTCTGGTGGCCGAGA
CGGTGAAGAGCTCTGCCGAGGACTCGCTGCACAAGGACGAGATCAATGCAGATGTGTTGAAAGAGGTGAGTGCGTCATC-
TTGTGGTAAAAGATTTTG--------------------------------------------------------------
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----------------------------------------------------------------------TTTGACAGTT
TGTCTAATTCACATCTAGATGTTTTTTAAGGATGTCACATCTAAGCTTCCACAACTATATAATGCA--------------
------------------------------------------------------------GCAACAAGAAACAAAAAAAA
AACTAGGACAAAAAAAAAATAGACCACAAACAAAGTGAACATCAGCTTATATGTGACATAACTATGTCACATCTAGAAAC
TGCATTATATACCATAT-TTGTTATAAGCACAGAGTGAGTTTCAGATCTAATGTGTGATAATTGCACAGGCCAAAATGTT
GCATTTCAATTCAGAAGTACTGCTGACGCCGTCAATGCACGGCACACTCTTCAGAACCATTGAGCTGTCCAAGAAATTTG
GGAGCAAAATATTCTTTGATCTCAATTTGCCATTGCCTTTGTGGAGGTCGAGGGACGAGACAAAAGAGTTCATAAATAGG
GCATGGAGGGAGGCTGATATCATAGAGGTGTCAAGGGATGAGCTGGAGTTCCTCCTCGATCACAAGTATTACGAACATAA
GCGAGCCACCCCGCCTCAGTATTATTTGGATGGGTTCCATCTAACAAGGAACTGGCCACAGTACTACCACTATACCCCTG
AAGAAATTGCTCCGATTTGGCATGATGGAATAAAACTCTTGCTGGTGACCTATGGAACACTTCGTATCCACTACTACACA
CCCAAGTTTCATGGCTGTGTGGTTGGAACGGAGGACGCACTCATAACTCCAACCACAACTGACCGGACGGGTTCTGGTGA
TGCTATTGTTGCTGCTGCTATTAGGAAGTTGACAACTTGCCCTGAGATGTATGAGGACCAGGATACATTGGAGAGGGAGC
TAAGATTTGCTGTTGCTGCTGGTATCATTTCGCAGTGGACTATTGGTGCCGTGCGAGGGTTCCCCACTGAAAGTGCTACC
CAGAACTTGAAGGAGCAAGTATATGTGCCTTCTATGTGGTGA--------------------------------------
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>chr3B_1_TraesCS3B01G397500
ATCTTCCTCCTTCTCCTCCAAGTCGTCACCAACCCTAAAGGGCTCTAGAGGAGGAGCTCCGAGGTCCACCTC--------
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---------------------------------------------------------------CGCGTTTTGGAGGAGGT
CCATGAACGAGGATGGGTTTGCCATTTCCTCGAACACCTCGTGCGCGGCGGGAGGAGGTTGGGCGACGGCGGCCGCCGCC
GGCTTCTTCCGCGCCGCAGGCTTCTTCCGCGGCTTCGAGGCCGCCCCTCGCGGCCCAAGGGAGGCCGCCTTCTGCCGACT
CTTCTTCATAGCCGGGGCGGGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACA---
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-----------------------GGCGGGGCGGGAACGGCGGCCGCGGCGGGCGGGGGCGCAGCGGCGGAGGGGCCTTCC
ATGGCCGGCGACGAGGAGGAGGACGCCGGGACGCGGGCGGGAAGGGAGCGGTTGCCTCCCGCGCGAACGAGGAGGCAGCG
ACGAAGAGGAGTGCGGGTTGGGGGGAGATTTCCCCCTCAACCCCTACTTCTACAGATTGCAAATTGGTTTGAGGGTTGGA
CCTCTAAATTTTTTTACGGGTTTGAGGGTTTAGATGTTCTAGTCTACGGCGTTTTTCCGGCGAAAACTGTAAAAAAACGG
TTATTTTTAAGGGTTTGAGGGTTTGAGGGCACTACTAGTAATGCTCTTACAACTTGTGACAACTGGTCAGATCCACTTCG
CCCGTTAAGGAGCAAACCCGACGATGTTAACGGTCGCTAAACCCTTACCGGGTCGCACTGGATAGAGTCGAACGCTCGCT
TCTCCCCCTTCCTGCTACCGCTCACCAGCGGCGAATTCCGCGAAGAAGAGAGGGGCAATGGCCATGGCCGCCGCCTCCCC
GTTCCTCCTCCTGCAACCTCTAGCCCCCAAGCCCCATCGTCCTCTCGGTCCCCTACACCCCAGCCTCCTCCGGACCCGCC
TCCTCCGCTGCTCGCCCAATGGTGCGGCGGAGCCGGAA---CCTCCTAAACCCACCCCACGCCGCGGGCGGAAGAAGGCG
TCGGAGCCGGGCTCGTCGCCGCCGAAGGCGAAGGCGACGAGGCGCAAGACCAAGAAGGCGGGGCAGGAGTCGGACTCGGA
GGGCGAGGAGGAGCCGGCTGCGAAGCCGAGGGCCCGTCGGACCAAGAAGTCCCCGAAGCAGGAGGCCAAGCAGCAGC---
AGGGGGAGGAGGATGCCCAGGCGGAGGAGCCTCGGAGTGCGGCCCGCGAGGAGGACGCGGGAGACGACGGCGGCGACGGG
GCGGATTTGCCGTACGAGTGGCCGCCGCTGGTATGCTGCTTCGGGGCGCCGCGGTGGGAGTTCGTGCCTACGGTGCGGGT
GTCGGACCAGCAGATGCACCCCGACCAGTACTCCACCTGGCTGCACCTGCAGTGGGAGCCGCCCGAGTTCGCGCGCTCGC
CCGGGAGCGCCTCCAGCAACGTCGCCATCGCGCTCACGCGGCTCGGCGGCCGCGCCGCGGTGCTCGGCAAGGTCGGCGAC
GACGACTTCGGCCACGAGCTCGTGTACCGCATGAACCGCGAGCGGGTGCAGACGCGCGCCATCAGGTTTGACGGCGCCGC
GTCCACAGCCATCGCCCGGATGAAGGTGGCGTTCCGGGACAAAGAGGACGGCGAGGGCGGGACATGTCTGGTGGCCGAGA
CGGTGAAGAGCTCTGCCGAGGACTCGCTGCACAAGGACGAGATCAATGCAGATGTGTTGAAAGAGGTGAGTGCGTCATC-
TTGTGGTAAAAGATTTTG--------------------------------------------------------------
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----------------------------------------------------------------------TTTGACAGTT
TGTCTAATTCACATCTAGATGTTTTTTAAGGATGTCACATCTAAGCTTCCACAACTATATAATGCA--------------
------------------------------------------------------------GCAACAAGAAACAAAAAAAA
AACTAGGACAAAAAAAAAATAGACCACAAACAAAGTGAACATCAGCTTATATGTGACATAACTATGTCACATCTAGAAAC
TGCATTATATACCATAT-TTGTTATAAGCACAGAGTGAGTTTCAGATCTAATGTGTGATAATTGCACAGGCCAAAATGTT
GCATTTCAATTCAGAAGTACTGCTGACGCCGTCAATGCACGGCACACTCTTCAGAACCATTGAGCTGTCCAAGAAATTTG
GGAGCAAAATATTCTTTGATCTCAATTTGCCATTGCCTTTGTGGAGGTCGAGGGACGAGACAAAAGAGTTCATAAATAGG
GCATGGAGGGAGGCTGATATCATAGAGGTGTCAAGGGATGAGCTGGAGTTCCTCCTCGATCACAAGTATTACGAACATAA
GCGAGCCACCCCGCCTCAGTATTATTTGGATGGGTTCCATCTAACAAGGAACTGGCCACAGTACTACCACTATACCCCTG
AAGAAATTGCTCCGATTTGGCATGATGGAATAAAACTCTTGCTGGTGACCTATGGAACACTTCGTATCCACTACTACACA
CCCAAGTTTCATGGCTGTGTGGTTGGAACGGAGGACGCACTCATAACTCCAACCACAACTGACCGGACGGGTTCTGGTGA
TGCTATTGTTGCTGCTGCTATTAGGAAGTTGACAACTTGCCCTGAGATGTATGAGGACCAGGATACATTGGAGAGGGAGC
TAAGATTTGCTGTTGCTGCTGGTATCATTTCGCAGTGGACTATTGGTGCCGTGCGAGGGTTCCCCACTGAAAGTGCTACC
CAGAACTTGAAGGAGCAAGTATATGTGCCTTCTATGTGGTGATTGGTGAACTTGTAAATCATTTCTGGTGAAGGAGGCAG
AAATTTATGTTACGAGCACGATTCATAAGTGGTGCAGCAGAAGTGAGCAAGGATAATATTTTACCACAAGAGTTGACAGG
TACCTTTGTCTACCACTTTATCTGATATTATTTTATCATCCAGTTTCTCCCAT----------AACTTCAGTATGAAAAT
GTGTTCGCCACTGAAAGACTTGTATTGCTTGACGATGAAAATTGTTTATT------------------------------
------------------------------------------------------------------------------GT
GTATCAAAATACAAAGTGATACTCCCTCTGTAC-----------------------------------------------
-------------------------------------AGAAATATAAGATCTTAATGCACAGAACTACCTGAAATATATC
TGATGATAGAAAAAAAATGCTACAACAAAATGCAATCATTTCAAGAGCAGCTAAAGCAAATATTACATCAAATGAACATG
GCTATTTTTT----------------TTATTCATCACTTGCCACTTACAACTTGGTCTGTAGCTGATAACTACTGCATAT
ACACAAATCCATTCTGAATAAAGTC-ATACTTTTTAGATGAATACAAAATTTGAGAAAAAAGAGCAAAGATTGTACATTC
ATAGTATAAACGAAGTACAAACATGTAACGGAAGTTTTCTGTCTTGCCAATCCTACCCTCTGTTGTACATATGTCCTCTG
-AACTACTCGAAATCTCTCTGTCTTCCCATCCATGGCTACACTTGAATAAGCAATTTGTTGAAACTGCAATTCTCGGAGG
ACAATGAGTGAACCTCTCTTTCTCACCTCCATATGCAAGAACGAGTATTACATACATTGTTAGTCATGAAAATGATCTGT
GGTATGTTTGCTGTCAGTTTACTAGGAGTTGCACTATTTGGTTTATCTCAATCGTCCTAAGAGATGTCTACCTATTTCCA
TGTCACACCTCACATGCAGCGAAGCGGGCTGAAATATCCCCAGTCCCCACCTCTTTAGAGCAAGTCCATGTCGCTAAATC
CTTTGTGTTTTTTTGCACAAACAACCTGGGAGAGGATTTGCATAAAAATACTCCTCTTGCCT
>chr3A_1
ATCTTCCTCCTTGTCCTCCAAGTCGTCACCAACCCTAAAGGGCTCTAGAGGCGGAGCTCCGAGGTCCACCTCCACGTTTT
GGAGGAGGTCCATGAACGAGGATGGGTTTGCCATTTCCTCGAACACCTCGTGCGCGGCGGGAGGAGGTTGGGCGACGGCG
GCCGCCGCCGGCTTCTTCCGCGCCGCAGGCTTCTTCCGCGGCTTCGAGGCCGCCCCTCGCGGCCCAAGGGAGGCCGCCTT
CTGCCGACTCTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGCTCCGAGGTCCACCTCCGCGTTTTGGAGGAGGT
CCATGAACGAGGATGGGTTTGCCATTTCCTCGAACACCTCGTGCGCGGCGGGAGGAGGTTGGGCGACGGCGGCCGCCGCC
GGCTTCTTCCGCGCCGCAGGCTTCTTCCGCGGCTTCGAGGCCGCCCCTCGCGGCCCAAGGGAGGCCGCCTTCTGCCGACT
CTTCTTCATAGCCGGGGCGGGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGACGCGGGCGGGACGGGCGGGGCGGGAACGGCGGCCGTGGCGGGCGGGGGCGCGGCGGCGGAGGGGCCTTCC
ATGGCCGGCGACGATGAGGAGGGCGCCGGGACGCGGGCGGGAAGGGAGCGGTTGCCTCCCGCGCGAACGAGGAGGCAGCG
ACGAAGAGGAGTGCGGGTTGGGGGGAGATTTCCCCCTCAACCCCTACTTCTACAGATTGCAAATTGGTTTGAGGGTTGGA
CCTCTAAATTTTTTTACGGGTTTGAGGGTTTAGAGGTTCTAGTCTACGGCGTTTTTCCGGCGAAAACTGTAAAAAAACGG
TTATTTTTAAGGGTTTGAGGGTTTGAGGGCACTACTAGTAATGCTCTTAAAC----------------------------
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>chr5B_1
ATCTTCCTCCTTCTCCTCCAAGTCGTCACCAACCCTAAAGGGCTCTAGAGGCGGAGCTCCGAGGTCCACCTC--------
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---------------------------------------------------------------CGCGTTTTGGAGGAGGT
CCATGAACGAGGATGGGTTTGCCATTTCCTCGAACACCTCGTGTGCGGCGGGAGGAGGTTGGGCGACGGCGGCCGCCGCC
GGCTTCTTCCGCGCCGCAGGCTTCTTCCGCGGCTTCGAGGCCGCCCCTCGCGGCCCAAGGGAGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCA-
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---------ACGCGGGCGGGACGGGCGGGGCGGGAACGGCGGCCGCGGCGGGCGGGGGCGCGGCGGCGGAGGGGCCTTCC
ATGGCCGGCGACGAGGAGGAGGGCGCCGGGACGCGGGCGGGAAGGGAGCGGTTGCCTCCCGCGCGAACGAGGAGGCAGCG
ACGAAGAGGAGTGCGGGTTGGGGGGAGATTTCCCCCTCAACCCCTACTTCTACAGATTGCAAATTGGTTTGAGGGTTGGA
CCTCTAAATTTTTTTACGGGTTTGAGGGTTTAGAGGTT-TAGTCTACGGCGTTTTTCCGGCGAAAACTGTAAAAAAACGG
TTATTTTTAAGGGTTTGAGGG-----------------------------------------------------------
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>chr5B_1
ATCTTCCTCCTTCTCCTCCAAGTCGTCACCAACCCTAAAGGGCTCTAGAGGCGGAGCTCCGAGGTCCACCTC--------
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---------------------------------------------------------------CGCGTTTTGGAGGAGGT
CCATGAACGAGGATGGGTTTGCCATTTCCTCGAACACCTCGTGCGCGGCGGGAGGAGGTTGGGCGACGGCGGC-------
-----------CGCCGCAGGCTTCTTCCGCGGCTTCGAGGCCACCCCTCGCGGCCCAAGGGAGGCCGCCTTCTGCCGACT
CTTCTTGATAGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-----------
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--------------------ACGGGCGGGGCGGGAACGGCGGCCGCGGCGGGCGGGGGCGCGGCGGCGGAGGGGCCTTCC
ATGGCCGGCGACGAGGAGGAGGGCGCCGGGACACGGGCGGGAAGGGAGCGGTTGCCTCCCGCGCGAACGAGGAGGCAGCG
ACGAAGAGGAGTGCGGGTTGGGGGGAGATTTCCCCCTCAACCCCTACTTCTACAGATTGCAAATTGGTTTGAGGGTTGGA
CCTCTAAATTTTTTTACGGGTTTGAGGGTTTAGAGGTTCTAGTCTACGGCATTTTTCCGGCGAAAACTGTAAAAAA-CGG
TTATTTTTAAGGGTTTGAGGGTTTGAGGGCACTACTAGTAATGCTCT---------------------------------
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>chr5A_1
ATCTTCCTCCTTCTCCTCCAAGTCGTCACCAACCCTAAAGGGCTCTAGAGGCGGAGCTCCGAGGTCCACCTC--------
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---------------------------------------------------------------CGCGTTTTGGAGGAGGT
CCATGAACGAGGATGGGTTTGCCATTTCCTCGAACACCTCGTGCGCGGCGGGAGGAGGTTGGGCGACGGCGGCCGCCGCC
GGCTTCTTCCGCGCCGCAGGCTTCTTCCGCGGCTTCGAGGCCGCCCCTCGCGGCCCAAGGGAGGCCGCCTTCTGCCGACT
CTTCTTCATAGCCGGGGCGGGGGCNNNNNNNNNN----------------------------------------------
---------------------------------------------------------------------------GCCA-
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---------ACGCGGGCGGGACGGGCGGGGCGGGAACGGCGGCCGCGGCGGGCGGGGGCGCGGCGGCGGAGGGGCCTTCC
ATGGCCGGCGACGAGGAGGAGGGCGCCGGGACGCGGGCGGGAAGGGAGCGGTTGCCTCCCGCGCGAACGAGGAGGCAGCG
ACGAAGAGGAGTGCGGGTTGGGGGGAGATTTCCCCCTCAACCCCTACTTCTACAGATTGCAAATTGGTTTGAGGGTTGGA
CCTCTAAATTTTTTTACGGGTTTGAGGGTTTAGAGGTTCTAGTCTACGGCGTTTTTCCGGCGAAAACTGTAAAAAA-CGG
TTATTTTTAAGGGTTTGAGGGTTTGAGAGCACTACTAGTAATGCTCT---------------------------------
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>chr2B_53
----------------------------------------------------GGAGCTCCGAGGTCCACCTC--------
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---------------------------------------------------------------CGCGTTTTGGAGGAGGT
CCATGAACGAGGATGGGTTTGCCATTTCCTCGAACACCTCGTGCGCGGCGGGAGGAGGTTGGGCGACGGCGGCCGCCGCC
GGCTTCTTCCGCGCCGCAGGCTTCTTCCGCGGCTTCGAGGCCGCCCCTCGCGGCCCAAGGGAGGCCGCCTTCTGCCGACT
CTTCTTCATAGCCGGGGCGGGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-------------
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----------------------------------------------------------------GGCGAAGGGGCCTTCC
ATGGCCGGCGACGAGGAGGAGGGCGCCGGGACGCGGGCAGGAAGGGAGCGGTTGCCTCGCGCGCGAACGAGGAGGCAGCG
ACGAAGAGGAGTGCGGGTTGGGGGGAGATTTCCCCCTCAACCCCTACTTCTACAGATTGCAAATTGGTTTGAGGGTTGGA
CCTCTAAATTTTTTTACGGGTTTGAGGGTTTAGAGGTTCTAGTCTACGGCGTTTTTCCGGCGAAAACTGTAAAAAAACAG
TTATTTTTAAGGGTTTGAGGGTTTGAGGGCACTACTAGTAATGCTCTGATAACT--------------------------
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>chr3D_832
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------------------------------------------------ACAACTTGTGACAACTGGTCAGATCCACTTCG
CCCGTTAAGGAGC-AACCCAACGATGTTAACGGTCGCTAAACCCTTACCGGGTCGCACTGGATAGAGTCGAACACTAGCT
TCTCCCCCCTCCTGT------TCACCGGCGACGAATTCCGCGAAGAAGAGAGGGGCAATGGCCATGGCCGCCGCCTCCCC
GTTCCTCCTCCTGCAACCTCTAGCGCCCAAGGCCCATCGCCCTTTCGGACCTCTACACCCCAGCCTCCTCCGGACCCGCC
TCCTCCGCTGCTCGCCCAACGGCGGCGCGGCGCCGGAACCCCCTCCTAAACCCACCCCACGCCGCGGGCGGAAGAAGGCG
TCGGAGCCGGGCTCGTCGCCGCCCAAGGCGAAGGCGACGAGGCGCAAGACCAAGAAGGCGGGGCAGGACTCCGACTCAGA
GGGCGAGGAGGAGCCGGCTGCGAAGCCGAAGACCCGCCGGACCAAGAAGTCCCCAAAGCAGGAAGCCAAGAAGCAGGAGG
AGGAGGAGGAGGAGGCCCACGCGGAGGAGCCTCGGAGCGCGGCCCGCGAGGAGGACGCGGGAAGCGACGGCGACGACGGG
GCGGATTTGCCGTACGAGTGGCCGCCGCTGGTGTGCTGCTTCGGGGCGCCGCGGTGGGAGTTCGTGCCGACGGTGCGGGT
GTCGGACCAGCAGATGCACCCCGACCAGTACTCCACCTGGCTGCACCTGCAGTGGGAGCCGCCCGAGTTCGCGCGCTCGC
CGGGGAGCGCCTCGAGCAACGTCGCCATCGCGCTCACCCGGCTCGGCGGCCGCGCCGCGGTGCTTGGCAAGGTCGGCGAC
GACGACTTCGGCCACGAGCTCGTGTACCGCATGAACCGCGAGCGGGTGCAGACCCGCGCCATCAGGTTTGACGGCGCCGC
GTCCACAGCCATCGCCCGGATGAAGGTGGCGTTCCAGGACAGAGAGGACGGCGAGGGCGGGACATGTCTGGTGGCCGAGA
CGGTGAAGAGCTCTGCCGAGGACTCGCTCCACAAGGACGAGATCAATGCAGATGTGCTGAAAGAGGTGAGTGCGTGTTCT
TTGTGGTAAAAGATTTAG--------------------------------------------------------------
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----------------------------------------------------------------------TTTGATGCCG
TCTCCATAGG----------------------------------------------------------------------
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------------------------------------------------------------------------CGAGAAAC
TGCATTATATACCATAT-TTGTTATAAGCACAGAATGAATTTCAGATCTAATATGTGATAATTGCACAGGCGAAAATGTT
GCATTTCAATTCTGAAGTACTGCTGACGCCGTCAATGCACGACACGCTCTTCAGAACCATTGAGCTGTCCAAGAAATTTG
GAAGCAAGATATTCTTTGATCTCAATTTGCCATTGCCTTTGTGGAGGTCAAGGGATGAGACAAAAGAGTTCATAAATAGG
GCATGGAAGGAGGCTGATATCATAGAGGTGTCAAGGGATGAGCTTGAATTCCTCCTCGATCACAAGTATTACGAATATAA
GCGAGCCACCCCGCCTCAGTATTATTTGGATGGGTTCCATCTAACAAGGAACTGGCCACAGTACTACCACTATACCCCTG
AAGAAATTGCTCCGATTTGGCATGATGGAATAAAACTCTTGCTGGTGACCTATGGAACACTTCGTATCCACTACTACACA
CCCAAGTTTCATGGCTGTGTGGTTGGAACGGAGGATGCACTCATAACTCCGACCACAACTGACCGGACAGGTTCTGGTGA
TGCTATTGTTGCTGCTGCTATTAGGAAGTTGACAACTTGCCCTGAGATGTATGAGGACCAGGATACATTGGAGAGGGAGC
TCAGATTTGCTGTTGCTGCTGGTATCATTTCGCAGTGGACTATTGGTGCCGTGCGAGGGTTCCCCACTGAAAGTGCTACC
CAGAACTTGAAGGAGCAAGTATATGTGCCTTCTATGTGGTGATTGGTGAACTAGTAAATCATTTCTGATGAAGGAGGCAG
AAACTTATTTTGCGAGCGTGGTTCATGAGTGGTGCAGCAGAAGTGAACAGGGATACTATTTTACCACAAAAGTTGACAGG
TACCTTTGTCTACCAGTTTATCAGATATTATTTTATCATCCAATTTCTATCATAACAAATGTAAACTTCAGTAGGAAAAT
GTGCCTGTCAA-GAAAGACTTATATTGCCTGGTGAT------TTTTTATT------------------------------
------------------------------------------------------------------------------GT
ATATCAAA-TACATAGTGATGCCTTATATGCTACTGTTAAAGCCACCTCTTTTTTACTTTTTTATGTTTAATGCCTACCC
ACTAAGCATAACTGATATGCCACACAGCAAGCCACAGAGGAATATAGAAGTTTAATGCGAGGAACTACCTGCAATATATC
TGATGATAGACAAAAAATGCTACAACAGAATTCAATCATTTCAATAGCAGCTAAAGGAAAGAATACATCAAATGAAGTAA
TGAACAAGGTTATTTTCTTCTTATTATTATTCATCACTTGCCGGTTACAACTTGGTCTGTAGCTGATAAATATTGCATAT
ACACAAATCCATCCTGAATAAAGTCGATACTTCCTAAATGAATACAAAATTTTAAAAAAGAGAGCAAAGACTGTACATTC
ACAGTATAAACGAAGTACAAACATGTATCGAAAGTCTTCTGTCTTGCTAATCCTATCCTCTGTTGTACATATGTCCTCTG
AAACTACTCGAAATCTCTTTGTCTTCCGATCCATCG-TACACTTGAATAACCAATTTGTTGAAAATGCACTTCTCGGAGG
ACAATTAGTGAACCTCTCTTTCCCACCTCCATATGCAAGAACGAGTATTGCATACAT----AGTCTGGAAAATAATCTGT
GGTATG-TTGCTGTCAGATTACTAGGAGTTGCACTATTTGGTTTATCTCAATCATCCTAAGAGATGTCTACCTATTTCCA
TTTCACATCTCACATGCAGCGAAGAGGGCTGAAATATCCCCAGTCCCCACCTCTTTAGAGTAAGTCCATGTCGCTAAATC
CTTTGTGTTTTTTTGCACAAGCACCCTGGGAGAGGATTTGCATAAAAATGCTCCTCTTGCCT
>chr3A_841
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---------------------------------------------------------GACAACTGGTCAGATCCACTTCG
CCCGTTAAGGAGC-AACCTAACGATGTTAACGGTCGCTAAACCCTTACCGGGTCTCACTGGATAGAGTCGAACGCTCGCT
TCTCCCCCTTCCTGCTACCGCTCACCAGCGGCGCATTCCGCGAAGAAGAGAGGGGCAATGGCCATGGCCGCCGCCTCCCC
GTTCCTCCTCCTGCAACCTCTAGCCCCCAAGCCCCATCGTCCTCTCGGCCCCCTACACCCCAGCCTCCTCCGGACCCGCC
TCCTCCACTGCTCGCCCAACGGCGCCGCGGCGCCGGAGCCCCCTCCTAAACCCACCCTACGCCGCGGGCGGAAGAAGGCG
TCGGAGCCGGGCTCGTCGCCGCCCAAGGCGAAGGCGACGAGGCGCAAGACCAAGAAGGCGGGACAGGACTCTGACTCGGA
GGGCGAGGAGGAGCCGGCTGTGAAGCCGAAGACCCGCCGGACCAAGAAGTCCCCGAAGCAGGAGGCCAAGCAGCAGC---
AGGGGGAGGAGGATGCCCAGGCGGAGGAGCCTCGGAGTCCGGCCCGCGAGGAGGACA---------ACGGCGACGACGGG
GCGGATTTGCCGTACGAGTGGCCGCCGTTGGTGTGCTGCTTCGGGGCGCCGCGGTGGGAGTTCGTGCCGACGGTGCGGGT
GTCGGACCAGCAGATGCACCCGGACCAGTACTCCACGTGGCTGCACCTGCAGTGGGAGCCGCCCGAGTTCGCGCGCTCGC
CCGGGAGCGCCTCCAGCAACGTGGCCATCGCGCTCACCCGGCTCGGCGGCCGCGCCGCGGTGCTCGGCAAGGTCGGCGAC
GACGACTTCGGCCACGAGCTTGTGTACCGCATGAACCGCGAGCGGGTGCAGACGCGCGCCATCAGGTTTGACGGTGCCGC
GTCCACGGCCATCGCCCGGATGAAGGTGGGGTTCAGGGACAGCGAGGACGGCAATGGCGGGACAAGTCTGGTGGCCGAGA
CGGTGAAGAGCTCTGCCGAGGACTCGCTCCAGAAGGACGAGATCAATGCAGATGTGTTGAAAGAGGTGAGTGCGTGATC-
TTGTGGTAAAAGATTAGTTTGAATCTCCATGGGCGAGCTGACATTTATGGGCAGGCTATGCCTCTATGTCGATGGTTGCC
AATGTGCATTGTTGCATTGCATTGAAACAACTCTTGATTATACACAAAACTAGAATCATTTTTGTCAAACCACGTAGCAT
GGACTGCTCGTTTTGTTTTTTGGGTTATCTTCGATCAATTCCTGCTAAAATATCCAACTGACGCTCCATTTGATGGTACT
GCTGCAGCTTAACTGCTTAAGTGATAAGCGAGAAAAGCATTCTGATAAGAGCAAAAGCCCATTAAATACCATATCTCAAG
TGCATTTGGCTTGCTGCTAATTTAGATATATTTTGGGAGATTTGTTTATAAGTCCTAAATCAAAGATAGGTTGTGGGAAG
AAATTGATTAATCATTTGATTGTGCCAATAGTCCTTTCTGACTAAGCAAGCAAATATTTGCGTAGGCTTCTTGACCACAG
GAGTATGATTGCTGGGAATAGTCTTTATTGGGTAGCAATCAAATGCAAGGAAGCTGAAGTGAAGTGGCACTCTTATATTT
TGTCTATTGCACTCCACTTTAGGAAAGAAAAATTAATCTGTCTGGATCCCCTTTTAAGCAATGTTTCCCCTATCATCGTA
GCAGAAACATCTTCCATGCTGCTCTAACTATTCAATTGCATTGCTCAGATTCATGCCCTTGCTAAAATGTAAAAAAATAA
AATTAGAGTATGTGTTTTGTGTTGTTAAGTTTACTTTTATCCTAGCAAGTGACTTTATGAGTGG-------TCGAGAAGC
TACATTATATACCATTTATTGTTATAAACACAAAATGAATTTCAGATCTAATATGTGATAATTGCACAGGCCAGAATGTT
GCATTTCAATTCAGAAGTGCTGCTGACGCCGTCAATGCACGACACACTCTTCAGAGCCATTGCGCTGTCCAAGAAATTTG
GAAGCAAAATATTCTTTGACCTCAATTTGCCATTGCCTTTGTGGAGGTCAAGGGATGAGACAAAAGAGTTCATAAATAGG
GCATGGAAGGAGGCTGATATCATAGAGGTGTCAAGGGATGAGTTGGAGTTCCTCCTTGATCACAAGTATTACGAATATAA
GCGAGCCACCCCGCCTCAGTATTATTTGGATGGGTTCCATCTAACAAGGAACTGGCCACAGTACTACCACTATACCCCTG
AAGAAATTGCTCCGATTTGGCATGACGGAATAAAACTCTTGCTGGTGACCTATGGAACACTTCGGATCCACTACTACACA
CCCAAGTTTCATGGCTGTGTGGTTGGAACGGAGGATGCACTCATAACTCCAACCACAACTGACCGGACGGGTTCTGGTGA
TGCTATTGTTGCTGCTGCTATTAGGAAGTTGACAACTTGTCCTGAGATGTATGAGGACCAGGATACATTGGAAAGGGAGC
TAAGATTTGCTGTTGCTGCTGGTATCATTTCACAGTGGACTATTGGTGCCGTGCGAGGGTTCCCCACTGAAAGTGCTACC
CAGAACTTGAAGGAGCAAGTATATGTGCCTTCTATGTGGTGATTGGTGAGCTAGTAAATCATTTCTGATGAAGGAGGCAG
AAATTTATTTTGCGAGCGTGATTCATGAGTGGTGCAGCAGAAGTGAACAGGGATACTATTTTACCACAAAAGTTGACAGG
TACCTTTGTCTACCAGTTCATCAGATATTATTTTATCATCCAATTTCTATCATAACAGATTTAAACTTCAGTAGGAAAAT
GTGCCCGTGAA-GAAAGACTTATATTGCCTGATGAT------TTTTTTATTGTACTCCCTCTGTTCACTTTTATAAGTCC
TTGGAAGACATTTCAGACAACATGCAAAGCAGCCTATTTTCGGTTGTCTGAAATGACTTATAAAAGTGAACGGAGGGAGT
ATATCAAA-TACATAGTGATACCTTATATGCTACTGTTAAAGCCACCTCTTTTTTACTTTTTTTTGTTTAATGCCTATCC
ACTAAGCATAACTGATATGCCACACAGCAAGCCACAGAGGAATATAGAAGTTTAATGCGAGGAAGTACCTGCAATATATC
TGATGACAGACAAAAAATGCTACAACAGAATTCAATCATTTCAATAGCAGCTAAAGGAAAGAATACATCA--------AA
TGAACAAGGTTATTTTCTTCTTATTATTATTCATCACTTGCCGGTTACAACTTGGTCTGTAGCTGATAAATATTGCATAT
ACACAAATCTATCCTGAATAAAGTCGATACTTCCTAAATGAATACAAAATTTTAAAAAAGAGAGCAAAGACTGTACATTC
ACAGTATAAACGAAGTACAAACATGTATCGGAAGTCTTTTGTCTTGCTAATCCTATCCTCTGTTGTACATATGTCCTCTG
AAACTACTCGAAATCTCTTTGTCTTCCAATCCATCGCTACACTTGAATAACCAATTTGTTGAAAATGCACTTCTCGGAGG
ACAATTAGTGAACCTCTCTTTGCCACCTCCATATGCAAGAACGAGTATTGCATACAT----AGTCTGGAAAATAATCTGT
GGTATG-TTGCTGTCAGATTACTAGGAGTTGCACTATTTGGTTTATCTCAATCATCCTAAGAGATGTCTACCTATTTCCA
TTTCACATCTCACATGCAGCGAAGAGGGCTGAAATATCCCCAGTCCCCACCTCTTTAGAGTAAGTCCACGTCGCTAAATC
CTTTGTGTTTTTTTGCACAAGCACCCTGGGAGAGGATTTGCATAAAAATGCTCCTCTTGCCT
>SNPs
---------------------------------------------------S----------------------------
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-------------------------------------------------------------------------SSSS---
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-------------------------------------------------------------S------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
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-------------S-----S------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
-------------------S--S--S----S-------------------------------------------------
-----------------------S--------------------------------------------S--S--------
-----------------------------S-S----S-------------------------------------------
--------------------------------------------------------------SS--------S-------
--------------------------------S-----------------------------------S-----------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
----------------------------S----------------------------------------------S----
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S-S--
------S-S---SS-SSSS-SSSSSSS--SS--SSSS-SSSSSS-S-S--SSSSSS-SSS-SSSSS--------------
--------------------------------------------------------------S-S--SSS-S-----S--
--S---SSS-SSSSSSSSS-SSSSSSS-SSSS-SS-SS-SSSS---SSS-SSS-SSSSS-SSSSSSSSSSS--S------
----------------------------------S---S-------------S---------------------------
-----------------------------------------S--------------------------------------
-S-----------------------------------------------S-----S------------------------
-------S-------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S--------------S------------
--------S--S-----SS-------S-------------------S--S-----S-------------S----------
---------------S------S-------------------S-----SS-----------------------S------
---SS--S--SS---------S------S---S---SSSSSS-S------------------------------------
--------------------------------------------------------------------------------
S-------S----S--------SSSS-S--SSS-----------------------------------------------
---------------------------------------S------SS-SS-------SSS----------S--------
----------S----------------S---S------------S-----------S---S-S-------------SSSS
SSS-SSSSS---------------------------------SS-------------------------S--S-------
------------S-------------------SS--S---------------S-S----S----------S---------
-S-------------------------S-------S-----------S-------S------------------------
------------------S--------S------S---------------S-------------S----S----------
-----S----------------S--------------------------S-------SSSS----SS------S------
------S----------S-----------------------------------S--------------------------
-S-----S----------------S-----------------------------------S-------------------
--------------------S--S-------------------------S------------
>forward_1454
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---------------------------------------------------------------------------CTTCG
CCCGTTAAGGAGCA------------------------------------------------------------------
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>reverse_2429
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----------------------------GCACAAGGACGAGATCAATGC-------------------------------
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>forward_1460
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CCCGTTAAGGAGCAAACCCG------------------------------------------------------------
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>reverse_3796
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-----------------------------------CGCACTCATAACTCCAACCAC------------------------
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>forward_3496
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------------------------------------CTTTGTGGAGGTCGAGGGAC------------------------
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>reverse_5221
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--------------------ACAACCTGGGAGAGGATTTGC---------------------
