>input_sequence_42307
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---------------------------------------------------------------------------ATGCA
GATCTTCGTGAAGACGCTGACGGGGAAGACCATCACCCTCGAGGTCGAGAGCAGCGACACCATCGACGCCGTCAAGGCCA
AGATCCAGGACAAGGAAGGTACGGGCCGTTCTTCCCG-CCCCGTCGCCCTCCCTTTCCTCCAGCATCGAGGCTGAATCCA
ACGTTTTTTGGATTTTGGCTTTGGTTGATCCGCTCTGTGGCGTGTTTTGGATCGATCGCAGGCATCCCTCCGGACCAGCA
GCGCCTCATCTTCGCGGGGAAGCAGCTGGACGACGGCCGCACCCTGGCCGACTACAACATTCAGAAGGAGTCCACGATCC
ACCTCGTGCTTCGCCTCCGCGGGGGCGGCTGCATGATCGAGCCCAACCTCAAGGCCCTCGCTCAGAAGTACAACCAGGGC
AAGCTCATCTGCCGCAAGTAATGCATAAACCCCTGCACCTGTTTCTCAAACAAATTACCTAGCTTTTGTTGGTATATACA
CCTGCATGTGCGACAGTCTCTTGTCCG-----------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------ATAAATATTGCTGCTTTGTGTGTTTAGTAATGGAACAA
GGTTATGATTTGCATGCATGCTGGATGTGCGGCAGTCTCCCGTTTGATAAAAATTGCTGCTTTGC-TGGTGTAGCCACTA
GTCATAGAAGGGCATGGTTTGCATGTCTGTAAT-----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------GCAGTATATCTGAATTATTT
ACAGTATAGTCAGTAGCCAAGGAATGTTATTGATAGAACCAGTGGGATGCAATACTTATTTATGTGATGACTACTATGAT
GTGTCATTTTG--TTCAGTCCCTTCAATCCAGATGCTGAAATGTGATAGTTGATACAAAAAAGAAGCATCTTTAGTGTCA
TCTGCCATGTTTCTTGGTTCATCAGTTCCCACTGGTGGCACATGATTTCTGCACTGTTAATTGTCCATGTACTT----GT
GTTCCATTTGCTTGTTGTCTCTTCATCTTCTCAAGCTGGTTCAGTGGTTTGATGGTTGATTGCCTTGCGCTTGCAGGAAT
GAC-AGTTAATTAGGCCAGTCACAA-------TACATGAAAAA-CCTCACAGTTAAAAGTATAAACTGCTGATTTGGATA
ACTGTTTCCTGCAATAAGTGTGCTGATTCTTTGTGGACGATGTGTCATGTAGTAACTGTTTACTATTACTGCTATCTGGT
ACCTGAAGTGCTTAGTTGATCATGCATGTTCTGTCTCATACCTTCGCTTAGAAGATATA-----------------TTGT
GCTTGTGATGTAGGTAACCTTTTTCACCATTTTGTGTTGCAGGTGCTATTCACGCCTGCCTCCCAAGGCCAAGAGTTGCC
GCAAGAAGAAGTGTGGCCACAGCAACCAGGTGTGAC---TTTCTCTTATGATCGAATAATCAAAC----TTACTCCATAT
CTAGGGTAGCATC--------ATTCATGTGTTCTCCTTAGTGATGATAACCCAACATGATTATGTTCTCGAAGAAAGATG
GCCAAATGTGACCATGATGAGCTAGCATTAGATCTTA-------ATTGGTTTCTCAAATCTACTACTCCCTCCGTTCGGA
ATTACTTGTCTCGAAAATGGATGTATCTAAAACTAAAATATAGTTTTAGATACATCCATTTTCGAGACAAGTAATTCCGA
ACGGAGGGAGTATATA-TGGTTTTATGTTATCCCTGATTTAGTTTGTTGTGT-----GTGTCGTACTGCTGTGTGCTATA
CATCTTCTCATGTTCACTTGGGAGATATTACTAGTACTACTGATAGAA--------------------------------
----------------ATAGGTTAAGCTTTGTTCCTACATTGTTCTTATTCCATGCCACCTTTTTTTAGCTGTTTTCCAT
ACCACCTTTGATCTAATGTGTTGCTTCTCCAACCAATTCTTTTCAGCTGCGGTCAAAGAAGAAGTGTAGGTACTGCTGA-
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>chr4B_1_TraesCS4B01G218000
AGGCGTCGTGGGAGCTCAGGATGCGACTGGGCTCCAGGGCTGCGATGAATTCGACTT-AGCGGCGTCGGTGACACAAATC
GATGTCGGTCGACGCCTTAATCAGTTGCGATAGTGGCGAAAATAGGTTGGGGGAGGTGTGGGCTAGGGTTTAAAGGTGCG
ACACCGAAGTTTATAGCTAGTAGTGGTCGGATTGGACGCCGACCTTTCGACCATTACTGTATGAGACGAGGGGCTGCTCG
GTTGTCGCGAGACTTTCTCTAGTTGGAGAAAAAGTGAGGAGGTGAGGCTATGTTCCGTGGGAA--AAGTTAAATTGTTAG
GGAAAATACGATCTAGAGGGTCTGCTAGAAGAAGCCTAATCCCTCAAAATGAAATTTCGCCTTCAAATTGGGATGTGCTA
CAAATGCCCTGAAAACCATAGAAAAGCGACATTTGATTTGATTAAGCTCTAGAACACGCTAGAGGCTTCTTTTTTTTTTT
ACTTTCCACGCATCAAGCACCGTTGATCTACCAGCAGCTCCACCCTACCCATTCGATTGGTTTGTCTCTAGAAGCCTCCC
CGCTCCTCCTCAACCTTGGTCAAAGAGACGAAACGTGACGTACTGCCAGTTGGCCGCAGCACAGCTGTATGGGCTGGGCC
ATCGATATGGGCCGAGGCAGACGTCGCCGTCTAGTGAGTAGTGACGGCAAGCGATTACCGTCTCGGTAAACGGAGCAATT
AGCACTAGTAAAGGTCTCACACGCAGTACGAAATTTGCGATTGGCGCGCCACCATTAGAGCGCCGGACTGCAACTCCGGC
AGGTAGGGTTTCGCTAGCTAACGCAGCGG-------GTGGGCGTGGCCGCCGGCTATATAAGGACGA-CCCCA-CCCTCC
CCTCCCCACCGCCGCCTCC---AGAGTTCAGAGTGCAGACCACCCACCACTGTCTCCCTCCCCCCTTCAGTTCCG-----
-------------TAGAGCTCGCGAAGGAGGAAGCAGGAACAGGCGAAGCGGC--GGGAGAGGAGGACCGACGAGATGCA
GATCTTCGTGAAGACGCTGACGGGGAAGACCATCACCCTCGAGGTCGAGAGCAGCGACACCATCGACGCCGTCAAGGCCA
AGATCCAGGACAAGGAAGGTACGGGCCGTTCTTCCCG-CCCCGTCGCCCTCCCTTTCCTCCAGCATCGAGGCTGAATCCA
ACGTTTTTTGGATTTTGGCTTTGGTTGATCCGCTCTGTGGCGTGTTTTGGATCGATCGCAGGCATCCCTCCGGACCAGCA
GCGCCTCATCTTCGCGGGGAAGCAGCTGGACGACGGCCGCACCCTGGCCGACTACAACATTCAGAAGGAGTCCACGATCC
ACCTCGTGCTTCGCCTCCGCGGGGGCGGCTGCATGATCGAGCCCAACCTCAAGGCCCTCGCTCAGAAGTACAACCAGGGC
AAGCTCATCTGCCGCAAGTAATGCATAAACCCCTGCACCTGTTTCTCAAACAAATTACCTAGCTTTTGTTGGTATATACA
CCTGCATGTGCGACAGTCTCTTGTCCG-----------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------ATAAATATTGCTGCTTTGTGTGTTTAGTAATGGAACAA
GGTTATGATTTGCATGCATGCTGGATGTGCGGCAGTCTCCCGTTTGATAAAAATTGCTGCTTTGC-TGGTGTAGCCACTA
GTCATAGAAGGGCATGGTTTGCATGTCTGTAAT-----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------GCAGTATATCTGAATTATTT
ACAGTATAGTCAGTAGCCAAGGAATGTTATTGATAGAACCAGTGGGATGCAATACTTATTTATGTGATGACTACTATGAT
GTGTCATTTTG--TTCAGTCCCTTCAATCCAGATGCTGAAATGTGATAGTTGATACAAAAAAGAAGCATCTTTAGTGTCA
TCTGCCATGTTTCTTGGTTCATCAGTTCCCACTGGTGGCACATGATTTCTGCACTGTTAATTGTCCATGTACTT----GT
GTTCCATTTGCTTGTTGTCTCTTCATCTTCTCAAGCTGGTTCAGTGGTTTGATGGTTGATTGCCTTGCGCTTGCAGGAAT
GAC-AGTTAATTAGGCCAGTCACAA-------TACATGAAAAA-CCTCACAGTTAAAAGTATAAACTGCTGATTTGGATA
ACTGTTTCCTGCAATAAGTGTGCTGATTCTTTGTGGACGATGTGTCATGTAGTAACTGTTTACTATTACTGCTATCTGGT
ACCTGAAGTGCTTAGTTGATCATGCATGTTCTGTCTCATACCTTCGCTTAGAAGATATA-----------------TTGT
GCTTGTGATGTAGGTAACCTTTTTCACCATTTTGTGTTGCAGGTGCTATTCACGCCTGCCTCCCAAGGCCAAGAGTTGCC
GCAAGAAGAAGTGTGGCCACAGCAACCAGGTGTGAC---TTTCTCTTATGATCGAATAATCAAAC----TTACTCCATAT
CTAGGGTAGCATC--------ATTCATGTGTTCTCCTTAGTGATGATAACCCAACATGATTATGTTCTCGAAGAAAGATG
GCCAAATGTGACCATGATGAGCTAGCATTAGATCTTA-------ATTGGTTTCTCAAATCTACTACTCCCTCCGTTCGGA
ATTACTTGTCTCGAAAATGGATGTATCTAAAACTAAAATATAGTTTTAGATACATCCATTTTCGAGACAAGTAATTCCGA
ACGGAGGGAGTATATA-TGGTTTTATGTTATCCCTGATTTAGTTTGTTGTGT-----GTGTCGTACTGCTGTGTGCTATA
CATCTTCTCATGTTCACTTGGGAGATATTACTAGTACTACTGATAGAA--------------------------------
----------------ATAGGTTAAGCTTTGTTCCTACATTGTTCTTATTCCATGCCACCTTTTTTTAGCTGTTTTCCAT
ACCACCTTTGATCTAATGTGTTGCTTCTCCAACCAATTCTTTTCAGCTGCGGTCAAAGAAGAAGTGTAGGTACTGCTGAA
GTGCCATGAAT------------CGGCTGACTGCTTGTTTAAGCTTGCCAGAACTGTCAGAGTTTTAAGTATCTTGATGT
AATGTTCCTGCTGGATGTTGAGCGCTGTCTCTTTTGAAAACTTGGTCTAGGGTTCCGGTGCATGCTCAAGATATGATTGT
AGTATGACAGCTTAGCGCTTTTGGTTGGAGGGAGCATTTATCTAATTTATCTATGTGCTGTTCTTGTTGTTTTCGATCTT
GAATCAACTGCTGGTCTT-GTCGTTCGTGCCCTTTGTGCTGCTTGCTATGTCAG-TCATTGATCGGGTAATGATATACTT
CCTCCGTCCGGAAATACTTGTCATCAAAATGGATGAAAAGAGATGTATTTAAAATTAAAATACGTCTAGATACATCCCCG
TTTATCCATTTTGATGACAAGTATTTCCGGACAGAGGGAGTATTTTTTACGAAGTAGGAATGTTGGATGTATACACTTCT
AGCCTGGTTAGTTATTCATTGGCTATTTTTTTTCTCTGCTTGTTCCAAATGAATTTCTGCAGCATAGATAA--AGCGTTG
ATTGATTTGTGTCTGCGTGCAACGTTTGGTTTGTACTTCCTTCGTTCCTAAATATTTGTCTTTTTAGTGGTTTCAAATGG
TCTACCACATACGGATGTATGTAGACATATTTTAGAGTATAGATTCACTCATTTTGCTCCGTATGTAGTCACTTGTTCAA
ATCTCTAGAAAGACAAATATTTAGGAACGGAGGGAGTAGTGGTTAGCGCTAGCTTAAAAACGGTGTGGTTGTGCATCTTT
GAGCCATATAAGAATGCAAACTACTCCCTCTGTTTCAAAATATTTGTCATAGTTTTAGTTCAAATTTGAAATACAACAAG
ACAA---TTTTGGAACGGAGGGAGTAATATGGTAGGTTTACT---------GAACTAATCGAGGGGCCTTTGATGTATGT
TGAGGATTTATAGCATCATCCATGTATGGCAGCTGGAGACTGCTGGACTGTTCTGGCTGGAATGAAC
>chr4A_1
AGGCGTCGTGGGAGCTCAGGATGCGCCTGGGCTCCAGGGCAGCGATTAATTTGAGCTCAGCAGCACCAGTGACACAAATC
AATGTCGGTGGACGCCTTAATAAGTGGCGATGGTGGCGAAAATAGGTTGGGGGAGGTGTGGGCTAGGGTTTAAAGGTGCG
ACACCGAAGTTTATAGCTGGCAGTGGTCGGATTGGACGCCGACCTTTCGACCATTACTGCGTGAGACGAGCGGCTGCTCA
GTTGTCGTGAGACTTGCTCTAGTTGGAGAAAAAGTGAGGAAGTGAGGCTATGTTTCGGGAAAAATAAGTCAAATTGTTAG
GAAAAATACAATGTGGAGGATCTGCTAGAAGAAGCCTAATCCCTCAAAACGAAAATT-GCCCTCAAATTGGGATGTGCTA
CAAATGCCCTGAAAACCATAGAGAAGTGATATCTGATTTGATGAAGCTCTAGAAGCCTCTAGAGCGTTCTGCTTTCCA--
---TTCCACGCATCAAGCACCGTTGATCTACCAGCAGCTCCACGCTACCCATTCGATTGGTTTGTCTCTAGAAGCCTCTC
CGCTCCCCCTCAACCTTGGTCAAAGAG-----ACGTGACGTACTGCCAGTTGGCCGCAGAACAGCTGTATGGGCTGGGCC
ATCCATATGGGCCGAGGCAGACGTCGCCAT--------TAGTGACGGCGAGCAATTACCGTCTCGGTAAACGGGACAATT
AGCACTAGTAAAGGTCTCACACGCAGCTCGAAATTTGCGATTGGCGCGCCACCATTAGAGCGCCGGACTGCAACTCCGGC
AGGTAGGGTTTCGCTA----ACGCAGCGG-------GTGGGCGCGGCCGCCGGCTATATAAGGACGACCCCCA-CTCTCC
TCTCCCCACCGCCGCCGCCTCCAGAGTTCAGAGTGCAGACCACCCGCCACCGTCTCCCTCCCGCCTTCAG-TCCG-----
-------------GAGAGCTCGCGAAGGAGGAAGCAAGAACAGGCGAAGCGGC--GGGAGCGGAGGACCGACGAGATGCA
GATCTTCGTGAAGACGCTGACGGGGAAGACCATCACCCTCGAGGTCGAGAGCAGCGACACCATCGACGCCGTCAAGGCCA
AGATCCAGGACAAGGAAGGTACGTGCCGTTCTCCCCG-CCCCGTCGCCCTCCATTTCCTCGAGCATCGAGGCTGAATCCA
CCGTTTCTTGGATTTTGGCTTTGGCTGATCCGCTCTGGGGTGTGTTTTGGATCGATCGCAGGCATCCCTCCGGACCAGCA
GCGCCTCATCTTCGCGGGGAAGCAGCTGGACGACGGCCGCACCCTCGCCGACTACAACATCCAGAAGGAGTCCACGATCC
ACCTCGTGCTTCGCCTCCGCGGGGGCGGCTGCATGATCGAGCCCAACCTCAAGGCCCTCGCTCAGAAGTACAACCAGGGC
AAGCTCATCTGCCGCAAGTAATGCATAAACCCCTGCAC-TGTTTCTCAAACAAATTAGCTACCTTTTGTTGGCATA----
CCTGGATGTGCGACAGTCTCTCGTTCG-----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------ATAAAAGTTGCTGCTTTGTGTGA----TAGTCGTACAA
GGCTATGATTTGCATGTATGCTGGATGTCCGACAGTCTCCCGTTCGATAAAAATTGCTGCTTTGTGTGGTGTAGTCACTA
GTCATAGAAGGGTATGATTTGCATGTACTCCCTCCGTTCCTAAATACTTGTCTTTCTAGGCATTTCAACAAGTGACTACA
TACGGAGCAAAATAAATGAATCTATACTCTAAAATATGTCTACATACATCCGTATGTAGTAGTCATTTGAAATGTTTAGA
AAGACAAATATTTAGGAACGGAGGGAGTACTACGTAATTTGTTTGGGCCTTGTGCTGTATGTAGTATATCTGAATTGTTT
GTGG----GTCAGTAGCCAAGGAATGTT-TTGATAGAATCACTGGAATGCAATACTTATTTATGTGA---CTATTATGAT
GTGCAATTTTGTTTTCAGTCCCTTCAATCCAGATGCTGAAATGTGATAATTGATACAAAAAAGAAGCATCTTTAGTGTCA
TCTGCCATGTTTCTTGGTTCATCAGTTCCCACTGGTGGCATGTGATTTCTGCATTGTTAATTGTCCATGTACTCCTACGT
GTTCCATTAGCTTGTTGTTTCTTCATCTTCTCAAGCTGGTTGAGTGGTTTGATGGTTGATTTCCTTGCGCTTGCAGAAAT
TAT-AGTTGATTAGGCCAGTCACAACTCACAATACGTGAAAAAGCCCATGCTTAC--AGTATAAACTGCTGATTTGGATC
ACTGTTTCCTGCAATAAGTGTGCTGATTCTTTGTGAACGATGTGTCATGTAGTAACTGTTTACTGTTACTTCTATCTGGT
ACCTGAAGTGCTTAGTTGATCATGCATGATCTGTTTCATACCTTTGCTTACAGGATAAGTAGTTCACAGGAAATATTTGT
GCTTCTGCTGTAGCTAACCTTTTTCACCATTTTGTTTTGTAGGTGCTATTCACGCCTGCCTCCCAAGGCCAAGAGTTGCC
GCAAGAAGAAGTGTGGCCACAGCAACCAGGTGTGACTAATTTCTCTTATGATCGAATAAGCAAATTGTTTTACTCCATAT
CTAGGGTAGCATC--------ATCCATGTGTTCTCCTTAGTGATGATAACCCAACATGATTATGTTCTTGAAGAAAGATG
GCCAAATATAACCATGATGAGCTAGCATTAGATCTTC-------ATTGGTTTCTCAAATATACTACTACCTCTCTTCCTA
AAAATCAGACGTTGGGGCAGTTTAATTTAAACTGCCCCAACATCTTA------------------------TATTTAGGA
ATGGAGGTAGTACATATTGGTTTTATGTTATCCCTGATTTAGATCGTCGTGTGTGTCGTGTCGTACTGCTGTGTGCTATA
CATCTTCCCATGTTCACTTGGGAGATATTTCTAGTACTACTGATAGAA--------------------------------
----------------ATAGGTTAGGCTTTGTTCCTACATTGTTCTTATTCCATGCCACCTTTTTTTAGCTGTTTTCCAT
ACCACCTTTGATCTAATGCGTTGCTTCTCCAACCAATTCTTTTCAGCTGCGGTCAAAGAAGAAGTGTAGGTACTGCTGAA
GTGCCATGAATGATCAGTTGAATCGGCTGACTGCCTGTTTAAGCTTGCCAGAAGTGTCAGAGTTTTAAGTATCTTAATGT
AATGTTCCTGCTGGATGTTGAGCGCTGTCTCTTTTGAAAACTTGGTCTAGGGTTCCGGTGCATGCTCGAGACATGATTGT
AATATGACAACTTAGCGCTTTTGGTTGGATGGACCATTTATCTAATTTATCTATGTGCTGTTCTTGTTGTTTTCGATCTT
GAATCACCTGCTGATCTTGGTCATTCGTGCCCTTTGTGCTGCTTGTTATGTCAGACAATTGATCGGGCAATGATATC---
--------------------------------------------------------------------------------
------------------------------------------TTTCTTGCGAAGTAGGAATGTTGGATGTATACACTTCT
AGTCTGATTAGTTACTCATTGGCTA-TTTTTTTCTCTGCTTGTGCCAAATGAATTTCTGCAGTGTTGTGTTGCAGCGTTG
ATTGGTTTGTGTCTGCGTGCAATGTTTGGTTTGTAGTGGTTATCAGTCAA------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GTTCGTGCTACCTTAAAAACAGTGTAGTTGTACATCTTT
GAGCCATATAAGAATGCAAACTACTCCCTTG--------------------GTTTTAGTTCAAATTTGAAATACAGCAAG
ACAAGTATTTCGGAACGGAGAGAGTAATATGGTAGATTTACTCTTGTGGCCGAACTAATCAAGGGGCCTTTGATGTATGT
TGAGGATTTATAGCATCATCCATGTATGGCGGCTGGAGACTGCTGGACTGTTCTGGCAGGAATTAAC
>chr4D_1
AGGCGTCGTGGGAGCTCAGGATGCGACTGGGCTCCAGGGCAGCGATGAATCCGAGCTCAGCAGCGCCGGTGACACAAATC
GATGTCGGTGGACGCCTTAATCAGTTGCGATGGTGGCGAAAATAGGTTGGGGGAGGTGTGGGCTAGGGTTTAAAGGCAGG
ACACCGGCATTTATAGCTGGCAGTGGTCGGATTGGACGCCGACCTTTCGACCATTACTGCGTGAGACGAGCGGCTGCTCG
GTTGTCGTGAGACTTTCTCTAGTTGGAGAAAAAGTGAGGAAGAGAGGCTATGTTTCGGGAAAAA---GTCAAATTATTAG
AAAAAATACGATGTAGAAGATTTGCTAGAAGAAGCCTAATCCCTCAAAGCGAAAATTTGCCCTCAAATTGGGATGTGCTA
CAAATGCCCTGAAAACCATAGAAAAGTGATATCTGATTTGATTAAGCTCTAGAAGCCTCTAGAGCGTTC----------T
ACTTTCCACGCATCAAGCACCGTTGATCTACCAGCAGCTCCACCCTACCCATTCGATTGGTCTGTCTCTAGAAGCCTCTC
CGCTCCTCCTCAACATTGGTCAAAGAG-----ACATGACGTACTGCCAGTTGGCTGCAGAACAGTTGTATGGGCTGGGCC
ATCCATATGGGCCGAAGCAGACGTCGCCGTCACACTA-----GACGGCGAGCGATTACCGTCTCGGTAAACGGGACAGTT
AGCACTAGTAAAGGTCTCACACGCAGCACGAAATTTGCGATTGGCGCGCCACCATTAGAGCGCCGGACTGCAACTCCGGC
AGGTAGGGTTTCGCTA----ACGCAGCGG-------GTGGGCGCGGCCGCCGGCTATATAAGGACGGCT-CCA-CCCTCC
CCTCCCCACCGCCGCCTCC---AGAGTTCAGAGTGCAGACCACCCACCACCGTCTCCCTCCCCACTTCAG-TCCG-----
-------------GAGAGCTCGGGAAGGAGGAAGCAGGGGCAGGCGAAGCGGC--GGGAGCGGAGGACCGACGAGATGCA
GATCTTCGTGAAGACGCTGACGGGGAAGACCATCACCCTCGAGGTGGAGAGCAGCGACACCATCGACGCCGTCAAGGCAA
AGATCCAGGACAAGGAAGGTACGTGCCGTTCTTCCCG-CCCCGTCGCCCTCCATTTCCTCGAGCATCGAGGTTGAATCCA
CCGTTTCTTGGATTTTGGCTTTGGTTGATCTGCTTTGCTGTGTGGTCTGAATCGATCGCAGGCATCCCTCCGGACCAGCA
GCGCCTCATCTTCACGGGGAAGCAGCTGGACGACGGCCGCACCCTCGCCGACTACAACATCCAGAAGGAGTCCACGCTCC
ACCTTGTGCTTCGCCTCCGCGGCGGCGGCTGCATGATCGAGCCCAACCTCAAGGCCCTCGCTCAGAAGTACAACCAGGGC
AAGCTCATCTGCCGCAAGTAATGCATAAACCCCTGCCA-TGTTTCTCGAACAAATTAGCTAGCTTTTGTTGGTATATATA
CCTGGATGTGCGACAGTCTCTCATTCCATAAATATGAGAATGGATTTTCAGAACCCGGGTGTCCAGGCACCCTCTTATCC
TGATCGCCCATGCAAGTTTTGACTCATCAAGATCTGTGCCAAGTCTTCTACTGCCAGTTGCATTAGCAGGGCTAGTGAAC
AGTAAGACGGGGAGTAGAAAAATTGAAAACGAGATGGGCCTTTCGTTGGGTACTGTTCATCGTAGGCACATCCCCCGCAT
CTGTCAGCGCTACCTCTATTGAGAGAAAGATATTGGGGCCCTTCATGCATCCCAGTCAATTTCTCTGACACACACAGCCG
CTTCATATACACAACCTAAAACGTTTCGTTTGATTCAATTAAAATTGAAGAGAGAGAGAGCCCTACTACTACGATGAGCC
TAGTATGTACCACCGTTCTAGGGAAGTGAAAGAGGGGAGCGCTTTTTCTAATGAAATGAGAGAAGTTTGTGCAAGTGGGA
CAAAGAGTGTCAGGAGAGAGAGAGCGCTAGTGAGAGTCCGCATGTGAGAGAGGAAGCGTGAGAGATACTATTGTGCATGC
ATGTCAGCCTACAGACTACGTCTAGACCTGCAGCCTACAGCTAGGACCTGTTGCATGCATCGGTCACCATCAAATTCACT
GGATAAGCACACATCTTCTGCAAATGGTCTGCTGCTGGACTGCCCACTGCACGAATCTTGGCAAGCCTGAACGGACAGAT
AGCAGGGGGTCGGGACACCCGGGTGCCGTCACACATTTTCGCATAAATATTGCTGCTTTGTGTGTTTAGTAGTCGTACAA
GGTTATGATTTGCATGTATGCTGGATGTGCGGCAGTCTCCCGTTTGATAAAAATTTCTGCTTTGC-TGGTGTAGCCACTA
GTCATAGAAGGGCATGGTTTGCATGTCTGTAAT-----------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TAATTTGTTTGGGCCTCTTGCTGTATGCAGTATATCTGAATTGTTT
GTGG----GTCAGT-GCCAAGGAATGTTATTGATAGAATCACTGGAATGCAATACTTATTTATGTGA---CTATTATGAT
GTGCAATTTT------------------------------------------------AAAAGAAGCATCTTTAATGTCA
TCTGCCATGTTTCTTTGTTCATCAGTTCCCACTGGTGGCACGTGATTTCTGCACTGTTAATCGTCCATGTACTT----GT
GTTATATTAGCTTGTTGTCTCTTCATCTTCTCAAGCTGATTGAGTGGTTTGATGGTTGATTGCCTTGCGCTTGCAGGAAT
GATAAGTTAATTAGACCAGTCACAA-------TACGTGAAAAA-CCCACGCTTAC--AGTATAAACTGCTGATTTGAGTC
ACTGTTTCCTGCAATAGGTGTGCTGATTCTTTGTGAACGATGTGTCATGTA---ACTGTTTACGATTACTGCTATCTGGT
AGCTGAAGTGCTTAGTTGATCATGCATGATCTGTATTGTACCTTTGCTTACAAGATAAGTTGTTAACAGGAAATATTTGT
GCTTGTGATGTAGCTGACCTTTTTCACCATTTTGTTTTGTAGGTGCTATTCACGCCTGCCTCCCAGGGCCAAGAGCTGCC
GCAAGAAGAAGTGTGGCCACAGCAACCAGGTGTGAC---TTTCTCTTGTGATTGAATAATCAAATTGTTTTACCCCATAT
CTGGGGTAGCATCATGCCATCATCCATGTGTTCTCCGGAGTGACGATAACCCAACATGATTTAT------------GTTT
GCCAAGATAGTCCAATATGAGCTAGTATTAGTTATTATCATCTTATGGGCTTCTCAAATCTACTACGTAC----------
--------------------------------------------------------------------------------
-----------------TGGTTTTATGCTATGCCTGATTTGGTAGATCGTTAGTGT-GTGTTGTACTGATATGCATTATA
TGTCTTCACATGTTCACTTGGGAGATATTTCATATACCGACAGCTGAAAGAAATATACTACTATTAAGTTTTGTTCACAT
GTTCGAATGTTGTAGTATATGTTAAGTTTTGTTCCCACATTGGTCTTTTACCAT--------------------------
---ACCGTTGATCTAATGCATTGCTTCTCCAACCATTTTTTTTCAGTTGCGGTCAAAGAAGAAGTGTAGGTACTGCTGAA
GTGCCATGAATGATCAGTTGAATCGGTTGACTACCTGTTTAAGCTTGCCAGAACTGTCAGAGTTCTAAGTATCTTGATGT
AATGTTCTTGCTGGATGTTGA----------------AAACTTGGTTTATGGTTCCGGTGCATGCTCGTGACATGATTGT
AATATGACAGCTTAGCTCTTTTGGCTGGAGGGAGTGCTTATCTAGTTTATCTATGTGCTGTTCTTGTTGTTTTCGGTCTT
GAATCACCTGCTGATGTTGGTCTTTCGTGCCCTTTGTGCTGCTTGTTATGTCAGATCATTGATCGGGCAATGATATC---
--------------------------------------------------------------------------------
------------------------------------------TTTTTTACGAAGTAGGAATGTTGGATGT-------TCT
AGCCTGGTTAGTTACTCATTAGCTA--TTTTTTCTCTGCTTGTTCCAAATGAATTTCTGCAGCGTAGGGTTACAGCC-TG
ATTGATTTGTGTCTGCGTGCAATGTTTGGTTTGTA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr4B_748
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------AAATTTGCGATTGGCGTGCCACCATTAGAGCGCCGGACGGCAACTCCGAC
AGGTAGGGTTTCCGTGCATACGACACGTGGTGGGCCGTGGGCCTGCCCAA-GGCTATATAA---------CGACCCCGCC
CTCCCGCGGCGCCGCCTTCGTT-----------------CTTCGCACCACCATCTCCTCCTCCAGTCGTCGCAAGCGCTA
TCCGGACAGGGGCGGGAGCTCGTGAAAGA---------------GAGAGAGGCGAGGGAGCGGAGCATCGACGAGATGCA
GATCTTCGTGAAGACGCTGACGGGGAAGACCATCACCCTAGAGGTGGAGAGCAGCGACACGGTCGACAACGTCAAGGCCA
AGATCCAGGACAAGGAAGGTACGGCCTGTTCTTCTCACCCCCGTCGCCTTCCATTTCCTCGAGCGTCGAGGTTGAATCCA
CCGTTTTCGGCTC--TGGCTTTGGTTGATCTGCTTTGTGGTGTGGTGTGGATCGATCGCAGGCATCCCTCCGGACCAGCA
GCGCCTCATCTTCGCGGGGAAGCAGCTGGACGATGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCCACGCTGC
ACCTTGTGCTTCGCCTCCGCGGGGGCACCAG---GATCGAGCCCAGCCTCAAGGAACTCGCTCAGAAGTACAACCAGAAG
AAACTGATCTGCCGCAAGTAATGAATTATGCCCTGCAC-CGTTCT-----CAAACTAGTTAGCTTTTGTTCGTAT-----
--------------------------------------------------------------------------------
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>chr4A_748
--------------------------------------------------------------------------------
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------------------------------AAATTTCCGATTGGCGTGCCACCATTAGAGCGCCGGACTGCAACTCCGGG
AGGTAGGGTTTCGGTGCATACGACACGTG-------GTGGGCGTGCCCAA-GGATATATAA---------CGA-CCCGCC
CTCCCGCAGCGCCGCCTTCGTT-----------------CTTCGCACCACCATCTCCTCCTCCAGTCGTCGCAAGCGCTA
TCCGGACAGGGGCGGGATCTCGGGAAGGAGAGAGAGGAAGCAGGGAGAGAGGCGAGGGAGCGGAGGACCAACGAGATGCA
GATCTTCGTGAAGACGCTGACGGGGAAGACCATCACCCTAGAGGTCGAGAGCAGCGACACCATCGACAACGTCAAGGCCA
AGATCCAGGACAAGGAAGGTATGGGCTTCTTACT------CCGTCGCCCTCCATTTCCTCGAGCATCGAGGTTGAATCCT
CCGA-TTTTGGATTTTGGCTTTGGTTGATCTGCTTTGTGGTGTGTTGTGAATCGATGGCAGGCATCCCTCCGGACCAGCA
GCGCCTCATCTTCGCTGGGAAGCAGCTGGATGATGGCCGCACCTTGGCCGACTACAACATCCAGAAGGAGTCCACGCTGC
ACCTCGTGCTTCGCCTCCGCGGGGGCACCCG---GATCGAGCCCAGCCTCAAGGAACTCGCTCAGAAGTACAACCAGAAG
AAACTGATCTGCCTCAAGTAACGAATTCAGCCCTGCAC-CGTTCT-----CAAA--------------------------
--------------------------------------------------------------------------------
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>chr4D_748
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------------------------------AAATTTGCGATTGGCGCGCCACCATTAGAGCGCCGGACTGCAACTCCGGC
AGGTAGGGTTTCGGTGCATACGACACGTG-------GTGGGCGTGCCCAA-GGCTATATAA---------CGACCCCGCC
CTCCCGCAGCGCCGCCTTCGTT-----------------CCTCGCACCACCATCTCCTCCTCCAGTCGTCGCAAGCGCTA
TCCGGACAGGGGCGGGAGCTCGGGAAGGAGAGAGAGGAAGCAGGGAGAGAGGCGAGGGAGCGGAGCATCGACGAGATGCA
GATCTTCGTGAAGACGCTGACGGGGAAGACCATCACCCTCGAGGTGGAGAGCAGCGACACCATCGACAACGTCAAGGCCA
AGATCCAGGACAAGGAAGGTACGGCCTGTTCTTCTCACCCCCGTCGCCTTCCATTTCCTCGAGCATCGAGGTTGAATCCA
CCGTTTTCGGCTC--TGGCTTTGGTTGATCTGCTTTGTGGTGTGGTGTGGATCGATTGCAGGCATCCCTCCGGACCAGCA
GCGCCTCATCTTCGCGGGGAAGCAGCTGGATGATGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCCACGCTGC
ACCTGGTGCTGCGCCTCCGCGGGGGCACCTG---GATCGAGCCCAGCCTCAAGGAACTCGCCCAGAAGTACAACCAGAAG
AAACTGATCTGCCGCAAGTAATGAATTATGCCCTGCAC-CGTTCT-----CAAAC-------------------------
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>SNPs
----------------------------------------S-------------SS-----S---S--------------
---------S---------------------S------------------------------------------------
------------------S-S--------------------------------------SS---------S---------
-------S--------------------------------S-------------S--S-SS--------S----------
-S----------S------S-----------------------------S----S--S---S------------------
--------------------------S--S--S---------------------SS-S------SS----SS---SSSS-
------------------------------------------------------------------------------S-
---------------------------SSSSS---------------------------S--------------------
---S---------------------------SSSSS-S----------S------------------------SS-----
--------------------------S-----------------------------------------------------
----------------SS--------------------------------------------------------------
--------------------------------------------------S-------------------S---------
-------------S----------------------------------------------S-------------------
--------------------------------------------------------------------------------
----------------------------------------------------S-------S-------------------
S---------------------------------------S---------------------------------------
------------------------------------------------------------S-------------------
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--------------------------------------S------------------S--------------------S-
----S----------------S--S-------------------------------------------------------
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-----------------------------------------------------------------------S-S-S----
----------------S---------------------------------------------------------------
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----------------------------------------------------------------------------S---
SSS-SSSS------------------------------S--S---S---------------------SSS---S------
---SS-------------------------------------------S-------------------------------
-----------------------------------------S--------------------------------------
--------S--------------------------------S--------------------------------------
--S--------------------------------S----------SSSSSS-SSSS----------------------S
-----------------------------------S--------------------------------------------
----------------------------S-----S---------S-----S------SS---------------------
-------------S---------------------S---S----------------------------------------
----------------------------------------------------------------S---------------
-----------------------S--------------------------------------------S-----------
-------S-----------------------------------------------------------S----SS---SS-
-SS-SSS-S-SSSSSSSSS-S-SS--S----SSSSSSSS-S-SS--SSSSSSSSSSSSSSSSSSSSSSSSS--S--SS--
-S-----S----S-------------------------------S--S--------------------------------
-------S---------------------S--------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
----------------------------------S---------------------------------------------
-------------------------------------------------------------------S---S--------
-S------------------------------------------------------------------------------
------S------S--------S----------------------S---------------------S--------SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------
--------------S----------S-------------------------------------S---SSSS---------
----------------------S------------S-SSS-SSSSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-S----S---------S----S-----S-------
-----------------------------SSSSSSSSSSSSSSSSSSSSSS------------------------S----
----------S---------S--------------S------------------------S-------------------
------------------------------S--------------------------S-----S---
>forward_66
----------------------------------------------TGAATTCGACTTAGCGGCGT--------------
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>reverse_1241
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----------------------------------------CGTGTTTTGGATCGATCGCA--------------------
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>forward_817
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-----------------------------------------------------------------------------GGC
AGGTAGGGTTTCGCTAG---------------------------------------------------------------
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>reverse_3236
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-----------------------------------GTTGCAGGTGCTATTCACGC-------------------------
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>forward_1542
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--TGCATGTGCGACAGTCTCTT----------------------------------------------------------
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>reverse_3648
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-----------------------------------------------TGTGTGTGTCGTACTGCTGT-------------
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>forward_3519
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----------------------------------------------------------TCTACTACTCCCTCCGTTCGG-
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>reverse_4670
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-----------------------------GAGGGAGTAGTGGTTAGCGC-------------------------------
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-------------------------------------------------------------------
