>input_sequence_42306
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ATGCCTGTGACCAAGGTTC
T--TATATTTTCAACACGACCTATCAACGTATGTAACAATAGGATGCACTCATATTTTTATTATTCGCTTCTCACTGTTA
GCATACTATTTCTAAAGTTGATATATCACTAGCTTGTTGAATTGAGAGATTCATCTTATTTACTAACCAGAGACCATAGG
ACGTATCTCCAATGGATGCTTCATTTGTACCAGAGGGAAATCCAAGGTTCTCACCAACAAGGTCTGTGAAGGTTTTCTTG
CATGGGGAGCCCTTTGGAAGGAAGATAAATTTGGCTACTCACAATAGTTATGACTCGTTGTCCTTCACTCTGAAAAGACT
GGGAAGCAACTATTCACGTAAGTAT-TTTTTA-AGGCAACTCTATGTTACAATTTGTAAGATAAGCTTTCATCAACGAAT
TTATTCTATATGAATAGTCTGACATGAATCTACATGTATATGTATTCTCTGTCATATAGTTCGAATGCAACATCCGAATC
TAGCATTGCATAATCATGCATGGTTGGG-TCAAAAGATCTTAACATGGAGGTGGAGCCCAAGGAAATTTTACGAAATAAA
ACACTACAATTAAGATAGATCATTGACCACGTTTCCATTTTTGTTTTGTTCACCTAGGCCATGCTGTTAATTATTTCAAA
TCAGTTACTACTTGTACGTCTTGGTGTAGAGGATCTAGATCACCTAGGCCATGTTCTTAATTATTTCAA----GTTACTA
CTTGTACGTCTTGGTGTAGAGGATCTAGATCTTCATTTACTTATAGGTTGCAGACTTGTCCCACGCAAATTGCAAGCCTA
GATCGCCGCTTTCTAGTACTCTTTGGGAGTACTAGTGTTTATGCAAGGGAATGTTTCAACTGTGTTTGGAATTTTTGTTT
CCTAACCTGACCTAGTATTGATCCTTACCATTATAATTGTGTGTCAGCCGCCTAACGAACAAGTGAGATTTTTCCTTCTT
TCTGGTCAAATATGGACAGTTATAAAGTTTATAATTATCTATTTACTAACATTGTTTCATTTGTATTGTTCAGTTTCACA
GTACCAACTTAGTGGCTTGGCGATGAGTGAAGAAGAAGGTGCGATACATAATGACTTCATGTTTTTGTACGATAATGTGG
ATGGTTATCGTTTCTTTCTCGGTGAAGTTCCATGGGAGTGAGTTCTTGGATATTAATCTATGTATTC----TTTTTTGCC
TCTTATGTAGAATTCTATAATTCTTGTTATAAATGATGAAATATTAACAACTAAATGTTACAGGGATTTTGCTATTTCAG
TCAAGAAGATCTACATTCTTCCTGGAGAAAAACAAGATGGTGCGTGTACAATATAAATGAACTGTATACATGTGTTTTAC
ATTCGTAGATAAATAAGAACACCAATTAACTTATTTGATTTCTAGAACTATATGTGGTAATATATATTTT----TCAGTG
GTTTGTTGCACCAACAAAGTGGTGTAGGCTCGTGGCATCACAAGTTTTTCTACTACG-AAATCAAAG---TATGGTAAAA
GAAACAGAAGAAATAAGTATTTATTGAAACATGACATCACTGACTGCATGCAGACAATGAGGAATATCTGGAAGAGGGAG
ATGCAGATAACGGTGATGACAATGGTGGTGCTGCCGCCGATGGAGATGATGATGCTGTTGGTGAAGATGGAGCCCTGGAC
GCTGTTGTTGCTGAGGATGAGGGAGATGGAGCCGATGACGATGGAGATGGAGCTGTCGGCGAAGATGGAGATGGAACTTA
TGATGATGAAGACAAAGTTGTTGGCGATGATGGAGATGATGATGGTACCGAGGACAATGATGGTGGCGCCGCGGAGTTGG
CGAGAAATATTTAG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr4B_1_TraesCS4B01G108700
TCGGTATTTTTATTTTTGCTTACATGTTTTCATGTGCATATCCTGTGACCTATTTTGAAATGATATGTCGCAACGAATGG
GGATGTGTTGCGTATATTTGTTTTCGTTGCCATATGCGTACTAAAAATTATGCAT---TGTTGTTGTACTATTTTTTGAC
AGATTGTGGTAAAATGTTTATGCAACAATGTTGCCAACTCATGAGAGCGATGCCATATGTCAAA-TTTTACGTTACAACA
ATTTGACACTTGAAATTCGTTGGTTAAGTGAGATTGGATAGTGTGGCGGACCACCAA-TATGTTCATGGTCGTCCAATAT
ATGTCTGGTGGTAGCCATGAATGATTGTGGAGATATTGAAACAACTATGCTGATTTAGTACCCAAGTTCCATATAAGATT
TACTCCATTTATTGCAAAATGTAAATGGATTTCTATAATAAATGCACGCCCCTTTAAATGGATTGTGTGCATTGTAGTAT
GAAACTAGAGTAATCTTCTATGGAACATCGATCATTATTACCTCTAAAAAGAGT--CGTGGACTATCATACGAGTATAAA
TAATACAACACACAGAATATCCA----------AAAGA---TTTTTTTTCTTGAAATGAAAACTTGTGCATGCATAGTAG
GTATGTAGGTCAAATGGTATCTTTTGCCATCAATGCAACATATACGAAAACAGTATACCAAGATATGCTGCATATATTAC
TTCATAGGACATTTATTGTTGGAGATAGGATTGCACAAAAGATGTATATGACTGATGCATTTCCGGCCACACCCTTATAT
TTTTGTAAATTTGCATAGCATATAAACCCATTTCCATCTTGTCCTTAAGTGTTTTCACTTAACTTCTTATTCAACTTCTT
AGGAAATTCTGAGTGCCATTTCTAGAAATACTATATTTACAAGGCTGAAGCTGAAAAACAAGGTATGCTATGTATTCTTT
CTTTAACTCTAGGACCAAGCATTGGAGTACAAAA-CCCCCAGTGTGCATCCCACCAGGTACATGCCTGTGACCAAGGTTC
T--TATATTTTCAACACGACCTATCAACGTATGTAACAATAGGATGCACTCATATTTTTATTATTCGCTTCTCACTGTTA
GCATACTATTTCTAAAGTTGATATATCACTAGCTTGTTGAATTGAGAGATTCATCTTATTTACTAACCAGAGACCATAGG
ACGTATCTCCAATGGATGCTTCATTTGTACCAGAGGGAAATCCAAGGTTCTCACCAACAAGGTCTGTGAAGGTTTTCTTG
CATGGGGAGCCCTTTGGAAGGAAGATAAATTTGGCTACTCACAATAGTTATGACTCGTTGTCCTTCACTCTGAAAAGACT
GGGAAGCAACTATTCACGTAAGTAT-TTTTTA-AGGCAACTCTATGTTACAATTTGTAAGATAAGCTTTCATCAACGAAT
TTATTCTATATGAATAGTCTGACATGAATCTACATGTATATGTATTCTCTGTCATATAGTTCGAATGCAACATCCGAATC
TAGCATTGCATAATCATGCATGGTTGGG-TCAAAAGATCTTAACATGGAGGTGGAGCCCAAGGAAATTTTACGAAATAAA
ACACTACAATTAAGATAGATCATTGACCACGTTTCCATTTTTGTTTTGTTCACCTAGGCCATGCTGTTAATTATTTCAAA
TCAGTTACTACTTGTACGTCTTGGTGTAGAGGATCTAGATCACCTAGGCCATGTTCTTAATTATTTCAA----GTTACTA
CTTGTACGTCTTGGTGTAGAGGATCTAGATCTTCATTTACTTATAGGTTGCAGACTTGTCCCACGCAAATTGCAAGCCTA
GATCGCCGCTTTCTAGTACTCTTTGGGAGTACTAGTGTTTATGCAAGGGAATGTTTCAACTGTGTTTGGAATTTTTGTTT
CCTAACCTGACCTAGTATTGATCCTTACCATTATAATTGTGTGTCAGCCGCCTAACGAACAAGTGAGATTTTTCCTTCTT
TCTGGTCAAATATGGACAGTTATAAAGTTTATAATTATCTATTTACTAACATTGTTTCATTTGTATTGTTCAGTTTCACA
GTACCAACTTAGTGGCTTGGCGATGAGTGAAGAAGAAGGTGCGATACATAATGACTTCATGTTTTTGTACGATAATGTGG
ATGGTTATCGTTTCTTTCTCGGTGAAGTTCCATGGGAGTGAGTTCTTGGATATTAATCTATGTATTC----TTTTTTGCC
TCTTATGTAGAATTCTATAATTCTTGTTATAAATGATGAAATATTAACAACTAAATGTTACAGGGATTTTGCTATTTCAG
TCAAGAAGATCTACATTCTTCCTGGAGAAAAACAAGATGGTGCGTGTACAATATAAATGAACTGTATACATGTGTTTTAC
ATTCGTAGATAAATAAGAACACCAATTAACTTATTTGATTTCTAGAACTATATGTGGTAATATATATTTT----TCAGTG
GTTTGTTGCACCAACAAAGTGGTGTAGGCTCGTGGCATCACAAGTTTTTCTACTACG-AAATCAAAG---TATGGTAAAA
GAAACAGAAGAAATAAGTATTTATTGAAACATGACATCACTGACTGCATGCAGACAATGAGGAATATCTGGAAGAGGGAG
ATGCAGATAACGGTGATGACAATGGTGGTGCTGCCGCCGATGGAGATGATGATGCTGTTGGTGAAGATGGAGCCCTGGAC
GCTGTTGTTGCTGAGGATGAGGGAGATGGAGCCGATGACGATGGAGATGGAGCTGTCGGCGAAGATGGAGATGGAACTTA
TGATGATGAAGACAAAGTTGTTGGCGATGATGGAGATGATGATGGTACCGAGGACAATGATGGTGGCGCCGCGGAGTTGG
CGAGAAATATTTAGTGACATCCAGGAGCTCACCTTGCAAGCCTGGTTGCAGTTACATGCTGCTTAATTCTCGCTAGCTAG
CAAGTTTGCCTTTGAGTTATTTATGCAC---ATTATATCATCTAAACGTTTATCCTACATATGTTTGAGACTTCTATTAC
CAATAAAAAAAACTTCATATAATCTCTTTGGAATATCCGAATATGTTCCTGAAGGAACCATTTTGTGAACCGCCCCACAC
ATATCAAAGCCTGCATGTTGCTTCTTCAGGGTAGTGCGGAAATTGCTTTTGGAGGCCAAGCTCCATGGAGGCCTCCATTT
GCAATTTTTAAAATTCATATCTCCATGTTTCAAAAAATTCT--AAAAAATACAGATATACGTGGAAGTATTATGTACATG
TGTGT-AAATTTTCAAGATGAAATACGTTGAAATGAAGGCATGGCAAAAATAAAAATTCATCCTCAAAGTCCATGAATTT
GTTT--TTTGTATAGGTTGCATTTCAAGGTATTTCATCATGGAC-TTCTACACACATATACCTTTCATCCTTATATACTT
GCATATTTTTTTCAGATTTTTTTAAACCGACAAGTTTGAATTTTATTTTTTTCAGAAATTTTGGG-----CTCCATGGAG
CCCACTCACCAAAACGCCCCACTCAGAGTATTGTGTGCATATATAAAGTTCAGCTGTGATGTTTTTTTTACGCGAATGCA
TTCAGCGTGACGAACCTTCGGTCTGCTGAAGCATTTCGACCAATCGGGCCGCCCCATTAGGAGAGTCAAACTTCGATCGT
TTCTGTCAAGCCTACAACCGCCAGTCGCCGCGCCACGTTTCTCGTGTTGGGGAACGTAGTAATTTCAAAAAAAATTCTAT
GCACACGCAAGATCATGGTGATGACATAGCAATGAGAGGGGAGAGTGTTGTCCACGTACCCTCGTAGACCGTAAGCGGAA
GCGTTATGACAACGCGGTTGATGTAGTCGTACGTCTGCACGATCCGACCGATCCAAGTACCGAACGTA
>chr4D_1
TCGGTGTTTTTATTTTTGCTTACATGTCTTCATGTGCAAAGCTTGTGACCTATTTTGAAATGATATGTCGCAACGA-TGG
GGATGTGTTGCGTACATTTGTTTTCATTGGCATATGCGTATTAAAAATGATGCAT---TGTTGTTGTACTAGTTTTTGAC
AAATTGTGGTAAAATGTTTATGCAACAATGTTGCCAACTCATGAGAGTGATGCCGTATGTCAACTTTTTATGTCACAACA
GTTTGACGCTTGAAATTCGTTGATTAGTTGACATTGGATAGTGTGGCGGACCACCAA-TTTTTTCATGT-CGTCCAACAG
ATGTCTAGTGGTAGCCATGAATGATTCTGGAGATATAAAAACAACTATGATGATTTAGTACCCAAGTTCCATATATGATA
TACTCAATTTATTGCAAAATGTGAATGGATTTCTATAATAAATGCACGCCCCTTTAAATGGATTGTGTGCATTGTAGTAT
GAAATGAGAGTAATCTTCTATGGAACATGGATCATTATTACCTCTAAAA--AGT--CATGGACTATCATACGAGTATAAA
TAATACAACACACAACCTGACATGAGAATATCCAAAAGATTTTTTTTTTCTTGAAATGAAAACTTGTGCATGCGTAGTAG
GCATGCAGGTCAAATGGTATCTTTTGCCATCAATGCAACATATACGAAAACAATATACCAAGATATGGTACATATATTAC
TTCATAGGACATTTATTGTTGGAGATAGGATTGCACAAAAGATGTATATGACTGGCGCATTTCCGGCCACACCCTTATAT
TTTCATAAATTTGCATAGCATATAAACCCATTTCCATCTTGTCCTTAAGTGATTTCACTTAACTTCTTATTCAACGTCTT
AGGAAATTTTGAGTGTCATTTCTAGAAATACCATATTTATAAGGCTGAAGCTGAAAAACAAGGTATGCTATGTATTCTTT
CTTTAATTCTAGGACCAGGCATTGGAGTATAAAA-CCCCCAGTGTGCATCCCACCAGGTACATGCCTGTGACCAAGGTTC
T--TAT--TTTCAACAAGACCTATCAACGTATGTAACAATAGGGTGCAATCATATTTTTATTATTCGCTTCTCACTGTTA
GCATACTATTTCTAAAGTTGATATATCACTAGCTTGTTGAATTGAGAGATTAATCTTATTTACTAACCAGAGACCATAGG
ACCTACCTCCGATGGATGCTTCTCTTGTACCCGAGGGAAATCCAAGGTTGTCACCAACAAGGTTTGTGAAGGTTTTCTTG
CACGGGGAGCCCTTTGGAAGGAAGATAAATTTGGCTACTCACAATAGTTATGACTCATTGTCCTTCACTCTGAAAAGACT
GGGAAGTAACTACTCGCGTAAGTATTTTTTTTCAGGCAACAATATGTTACAATTTGTAAGATAAGCTTTCATCAACGAAT
TTATTCTATATGAATAGTCTGACATGAATCTACATGTATATGTATTCTCTGTCATATAGTTTGAATGCAACATCCGAATC
TAGCATTGCATAATCATGCATGGTTGGGGTCAAAAGATCTTAACATGGAGGTGGAGCCCAAGGAAATTTTACAAAATAAA
GCACCACAATTAAGATCGACCATTGACCACGTTTCCATTTTTGTTTTGTTCACCTAGGCCATGTTCTTAATTATTTCAAA
TCAGTTACTACTTGTACGTCTTGGTGTAGTGGATCTAGATCACCTAGGCCATGTTCTTAATTATTTCAAAACAGTTACTA
CTTGTACGTCTTGGTGTAGAGGATCTAGATCTTCATTTACTTATAGGTTGCAGACTTG-CCCACGCAAATTGCAAGGCTA
GATCACCGCTTTCTAGTACTCTTTAGAAGTACTAGTGTTTATGCAAGAGAATGTTTCAACTGCGTTTGGAATTTTTGTTT
CCTAACCTGACCTAGTATTGATCCTTACCGTTATAATTGTGTCTGAGCCACCTAACGAACAAGTGGGATCATTCCTT-TT
TCTGGTCAAATATGGGCAGTTATAAAGTTTATAATTATCTATTTACTGACATTATTTCCTTTGTATTGTTCAGTTTCACA
GTACCAACTTAGTGGCTTGGCGATGAGTGAAGAAGAAGGTGCAATAGATAACGACTTCATGTTTTTGTACGATAACGTGG
ATGGTTATCGTTTCTTTCTTGGTGAAGTCCCATGGGTGTGAGTTCTTCGATATTAATCTATGTATA----TTTTTTTGCC
TCTTATGTAGAATTCTATAGTTCGTGTTAT-AATGATGAAATAGTAACAACTAAATGTTACAGGGATTTCATTGTTTCAG
TCAAGAAGATCTACATTCTTCCTGGAGAAAAACAAGATGGTGCGTGCACAATATAAATGAGCTGTATACATGTGTTTCAC
ATTCATAGACAAATAAGAACACCAATTAACTTATTCGATTTCTAGAACTATATGTGGTAATATATATTTT----TCAGTG
GTTTGTTGCACGAACAAAGTGGTGTAGGCTCGTGGCATCACAAGTTTTTCTACTACAAAATCAAAGTATATATGGTAAAA
GAAACAGAAGAGATAAGTATTTATTGAAAAGTGACATCACTGACTGCATGCAGACAATGAGGAATATCTAGAAGAGGGAG
ATGCAGATAACAGTGATGGCAATGCTGGTGCTGCCGCTGATGGAGATGATGATGCTGCTGGTGAAGATGGAGCCCTGGAC
GCTGTTGTTGCCGAGGATGAGGGAGATGGAGCCGATGACGATGTAGATGGAGTTGTCGGCGAAGATGGAGATGGAGCTTA
TGATGATGAAGACGAAGTTGTTGGCGATGATGGAGATGATGCTGGTGCCGAGGACAATGATGGTGGCGCCGCGGAGTAGG
CGCGAAATATTTAGTGGCATCCAGGAGCTCACCTTGCAAGCCTGGTTGCAGTTACATACTGCTTAATTCTCGCTAGCTAG
CAAGTTTGCTTTTGAGTTATTTATGCATCTTATTATATCATCTGAACGTTTATCCCACATATGTTTGAGACTTCTATTAT
CAATATAAAAG--TCCATACAATCGCTTTTGAATATCCGAATATGTTCCTGAAGGAACCCTATTGTGAACCGCCCCACAC
ATATCAAAGCCTGCATGTTGCTTCTTCGGGGTAGTGCGAAAATTGCTTTTGGAGGCCGAGCTCCATGGAGGCCTCCATTT
GCAATTTTTAAAATTCATATTTCCATGTTTCAGAATTTCTAAAAAAAAATACAGATATACGTGGAGGTATAATGTATATG
TGTGT-AAATTTTCAAGACGAAATAAGCTGAAATGAAGGCATGGCAAAAATAAAAATTCATCCTCAAAGTCTATGAATTT
GTTTTTTTTGTATAGGTTGCATTTCAAGGTATTTCATCTTGGAC-TTTTACACACATATACCTATCATCCTTATATACTT
GCATATTTTTTTCAGATTTTTTTAAACCGACAAGTTTGAATTTTGATTTTTTCAGAAGTTTCAGGCTCCACTCCATGGAG
GCCACTCACCAAAACGCCCCACTCAGGGTAGTATGTGCATATATAAAGTTTATCCGTGATTTTTTT--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr4A_90
GCGTC---------------------------------------------------------------------------
-------------ACATTTGTTTTCATTGGCATATGCGTATTAAAAATGATGCATTGTTGTTGTAGTACTAGTTTTTGAT
AGGTTGTGGTAAAATGTTTATGCAACAATGTTGCCAACTCATGAAAGCGATGTCGTATGTCAAATTTTTATGTTACAACA
GTCTGACGCTTGAAATTCATTGATTAAGTGAGATTGGATACTGTGGCCGACCAACAAATTTTTTCATGGCCGTCCAACAG
ATGCTTGGTGCTAGCCATGAATGATTGTGTAGATATCAAAACAACTATGGTGATTTAGTACCCAAGTTCCATGTAAGATA
TACTCAATTTATTGCAAAATGTAAATGGATTTCTATAATAAATGCACGCCCCTTTAAATGGATTGTGTGCATTGTAGTAC
GAAATTAGAGTAATCTTCCATGGAACATGGATCATTATTACCTCTAAAA--AGAGCCGTGGACTATCAGACGAGTATATA
TAATACAACACACAACCTGACATGAGAATATCCAAAGA---TTTATTTTCTTGAAATGAAAACTTGTGCATGCGTCCTAG
GTATGCAGGTCAAATGGTATCTTTTGCCATCAATGCAACATATACGAAAACAGTATACCAAGATATGCTGCATATATTAC
TTCA-AGGACATTTATTGTTGGAGATAGGATTGCACAAAAGATGTATATGACTGACGCATTTCTGGCCACACCCTTATAT
TTTCGTAAATTTGCATAGCATATAAAACCATTTCCATCTTGTCTTTAAGTGTTTTCACTTAACTTCTTATTCAACTTCTT
AGGAAATTTCGAGTGCCATTTCTAGAAATACCGTATTTACAAGGCTGAAGCTG-AAAACAAGGTATGCTATGTATTCTTT
CTTTAATTCTAGGACCAGGCATTGTAGTATAAAGCCCCCCAGTGTGCATCCCACCAGGTGCATGCCTGTGACCAAGGTTC
TTATAT--TTCCAACAAGATCTATCAACGTATGTAACAATAGGGTGTACTC--ATTTTTATTATTTGCTTCTCACTGTTA
GCATACTATTTCTAAAGTTGATATATCACTAGCTTGTAGAATTGAGAGATTCATCTTATTTACTAACCAGAGACCATAGG
ACGTATCTTCAATGGATGCTTCTCTTGTACCCGAGGGAAATCCAAGGTTGTCACCAACAAGGTTTGTGAAGGTTTTCTTG
CATGGGGAGCCCTTTGGAAGGAAGATAAATTTGGCGACTCACAATAGTTATGACTCGTTGTCCTCCACTCTGAAAAGACT
GGGAAGCAACTATTCGCGTAAGTATTTTTTTA-CGACAACTATATGTTATAAATTGTAAGATAAGCTTTCATCAACGAAT
TTATTCTATATGAATAGTCTGACATGAATCTAAATGTATATGTATTCTCTATCATATAGTTCGAATGCAACATCCGAATC
TAGCATTGCATAATCATGCATGGTTGGGGTCAAAAGATCTTCACATGGTGGTGGAGCCCAAGGAAATTTTACGAAATAAA
ACACTACAATCAAGATAGATCATTGACCATGTTTCCATTTTTGTTTTGTTCACCTAGGCCATGTTCTTAATTATTTCAAA
TCAGTTACTAGTTGTACATATTGGTGC-----------------------------------------------------
-----------------AGAGGATCCAGATCTTCATTTACTTATAGGTTGCAGACTTTCCCCATGCAAATTGCAAGGCTA
GATCGCCGTTTTCTAGTACTCTTTGGAAGTACTAGTGTTTATGCAAGGGAATGTTTCAACTATGTTTGGAATTTTTGTTT
CCT-ACCTGACCTAGTATTGATCCTTACCGTTATAATTGTGTGTGAGCCACCTAACGAACAAGTGAGATCTTTCCTT-TT
TCTGGTCAAATATGGACAGTTATAAAGTTTATAATTATCTATTTACTGACATTGTTTCCTTTGTATTGTTCAGTTTCACA
GTACCAACTTAGTGGCTTGGCGATGAGTGAAGAACAAGGTGCGATAGATGATGACTTCATGTTTTTGTACGATAACATGG
ATGGTTATCGTTTCTTTCTCGGTGAAGTCCCATGGGAGTGAGTTCTTGGATACTAATCTATGTATTCTTGTTTTTTTGCC
TCTTATGTAGAATTCTATAGTTCTTGATAT-AATGATGAAAAAGTAACAACTAAATGTTACAGGGATTTCGCAGTTTCAG
TCAAGAAGATCTACATTCTTCCTGGAGAAAAACAAGATGGTGCGTGCACAATATAAATGAACTATATACATGTGTTTCAC
ATTTATAGACAAATAAGAACACCAATTAACTTATTTGATTTCTAGAACTATATGTGGTAATATATATATATTGATCAGTG
GTTTGTTGGACCAACAAAGTGGTGTAGGCTCGTGGCATCACAAGTTTTTCTACTAAAAAAATCAAAG---TATGGTAAAA
GAAACAGAAGAGATAAGTATTTATTGAAAAGTGACATCATTGACTACATGCAGACAATGAGGAATATCTGGAAGAGGGAG
ATGCAAATAACGGTGATGGCATTACTGGTGCTGCCGCTGATGGAGATGATGATGCCGCTGGTGAAAATGGAGCCCTGGAC
GCTGTTGTTGCTGAGGATGAGGGAGATGGAGCTGATGACGATGGAGATGGAGCCGGCGGCGAAGATGGAGATGGAGCTTA
TGACGATGAAGACGAAGCTGTTGGC---------GATGATGCTGGTGCCGAGGACAATGATGGTGGCGCCGCGAAGTAGG
CCAGAAATATTTAGTGGCATCCAGGAGCTAACCTTGCAAGCATGGTTGCAGTTACATGCTGATTAATTCCCGCTAGCTAG
CAAGTTTGCCTTTGAGTTATTTATGCATCTTATTATATCATCTAAACATTTATCCTACATATGTTTGAGACTTCTATTAT
TAATATAGAAG--TTCATATAATCGCTTTTGAATATCCGAATATGTTCTTGAAGGAACCCTGTTGTGAACCGCCCCACAC
ATATCGAAGCTTGCAAGTTGCTTCTTCAGGGTAGTGCAAAAAATGCTTTTGGAGGC----------------CTCCATTT
GCAATTTTTAAAATTCATATTTCCATGTTTCAAAAATTTCT--AAAAAATACAGATATACGTG------TAATGTACATG
TTTGTAAAATTTTCAAGGCAAAATACGTTGAAATGAAGGCATGGCAAAAATAAAAATTCATCCTCAAAGTCCATGA----
--TTTTTTTGTATAGTTGGCATTTCAAGGTATTTCATCTTGGACTTTTTACACACATATACCTTTCATCGTTATATAATT
GCATA-TTTTTTCAGATTTTTTTGAACCAACAAGTTTGGATTTTGAATTTAAAAAAAAATTCGGG-----CTCCATGAAG
CCCAGTCACCAAAACGCCCCACTCAGGGTA--GTGTGCATATATAAAGTTTATCTGTAATGTTTCTTT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>SNPs
-----S---------------------S----------S-S-S---------------------------------S---
--------------S----------S---S----------S-------S----------------------S--------
------------------------------------------------------S---------------S---------
S------S--------------S------------------------------------S-S-------S-------S-S
------------------------------------SS-----------S-----------------------------S
-----S--------------------------------------------------------------------------
----S-----------------------S--------------------SS-----------------------------
--------------SSS-SS-SS--------------------------------------------------S------
-----S--------------------------------------------------------------------------
-------------------------------------------------------S------------------------
---S----------------------------------------------------------------------------
--------S----------------------S------------------------------------------------
------S----------S-----------S--------------------------------------------------
------SS--------S--------------------------S------------------------------------
--------------------------------------------------------------------------------
----------------------SS-------S-----------------S-------------S----------------
--------------------------------------------------------------------------------
---------------S-------------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S-S--------------
-----------------------------S--------------------------------------------------
----------------------------------------------------------S-----------------S---
--------------------------S-----------------------------------------------------
-----------------------------S--------------S----S-------------------S-------S--
-----------------------------------------------S----------S---------------------
----------------------------------------------S----------------------------S----
----------------------------S---------------------------------------------------
-------------------S----------S------------S-------------------------S---S------
----------------------------------------------S------------------------------S--
----S----S----------------------------------------------------------------------
--------------------------------------------------------S-----------------------
-----------S-----------------SS-------------------------------------------------
------------------S-----S------------S-------------------S----------------------
---------------------------------------------------------------------------S----
-------------S---------------------------S----S------------------------------S--
----------------S---------------------------------------------------------------
---------------------------S---------------------------------------------------S
-----S----SSS-----------S----S-----------------------------S-S------------------
--------------------------------------S------------------S----------------------
--------------------S---------------S----------------------------S----S---------
------------------S-------------------------------------------------------------
--------------------------------------S--------S--------------------------------
--------------------------------------------SS---------------S------------------
--------------------------S---S-------------------S-S---------------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_215
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AACTCATGAGAGCGATGCCA-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------
>reverse_1965
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CAGCCGCCTAACGAACAAGT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>forward_1666
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TGTTCACCTAGGCCATGCTG--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>reverse_2847
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ACCGAGGACAATGATGGTGG--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>forward_2796
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CGGCGAAGATGGAGATGGAA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>reverse_3851
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------AACGCGGTTGATGTAGTCGT--------------------------------------
