>input_sequence_42263
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----------------------------------------ATGTCTTCGGAAGAGGTAACAGGTATCGAACTGAATTTGC
TAGAAAAAGTTACAAACCAATTTTCCGAGGAGCTCAAAATTGGAAGTGGTGGCTTTGGGGAAGTGTACAGGGTATGCTTA
TGAATTTTCTGTCGATTTCAAATGGTCACCTGCTACGTACTGGCTACTGCTAACAATGCATGCGTGTTGTATTTTTTTTT
CAGGGTGTGCTT-AATGGGTGTGAAATTGCTGTGAAGAAGCTTTATCTCACCAATAGATCAATAGATGATAAGAGTTTTA
CAAATGAATTTCGCCAACTTATGAAGGTCCAACATGAAAACATTATACGGCTGATTGGCTACTGCTATGAGATAAGACAT
AAGCATACTATAGACAACGGGCAACTTGTCTTTTCTCAAGTTATAGATCGAGCTCTCTGTTTCGAATACATGCCGGAAGG
AAGTCTTGCCAAGCATATTTCTGGTATTGATGTTGGTCTACCCTTAATTCAGCTATACTATTTGTCTAGTGAATAC----
-CATAATATTTTCCTT-TGGGCAGATGAATCTTGCAAACATGACTGGTCCACAACATTCAAAATAATTAAAGGGACCTGC
GAGGGCCTACACTACCTTCATAGAGGAACAGGAGACGGCAAACATATTTACCATCTGGACTTAAAACCGGACAACATATT
GTTGGATAAAGATATGGTCCCCAAAATCGCAGACTTTGGTTTGTCCAGACTCTTTGGTGAATCAAAGACCCACATAACAA
ACACCCGTATGGAGGGAACATTGTAAGCTGACGGTCTAGCATA----CATTTAGTTCCTAAGTACACATAAGTTCTAGCT
AGTACTTCTATTGCTAACTACTTGTCCAATGCTTATTGATGTCATAAAGAGGATTCATGGCACCAGAATATATACATGAG
TGTGCGATATCACCAAAGAATGATGTGTTCAGTCTCGGCGTTATAATTTTCTACCTACTGGCCGGACAGAAGGGCTACAA
CGATTATTGTGAGTCGCGGTCCTCTCCAGGGCAACAATTCATTGACAGAGTAAGTTCTGGTTCTTGTTCTTTCACATATA
TTTTCTCTTATAATATTAAAGCATAAACATCATATGTATTTGAGCTTACC-TACATTGCAATTTTGCAGGTACAAGAATA
CTGGAAAAAAAGGATGCGTGCATCGGTGGGCTACACATGGGACAAAATCGATCTCCTGGCGGTGAAGATATGCACTGAAA
TTGCAATGAGCTGTGTGGAGAAAGAGCGTAGGGACAGGCCTTCTACAAACAAGATTATTGATGAACTCCACCAACTAGAC
GCTCAAATGCAGATGTCAAAGAAAGATTCCGAGTCAGTTACAGGCCTGGTACGTACTCATCTCATGATT-----------
--------GAGGTTTATAGAATAACTGAACACTCTATCTATCATCCTTGGACATATATAAACCCCTTTTCACCTATAGGG
AAAATCCGACGTAAGATATATTGCGCTTGATCCATCACTGGAGCTGCGCTTCCCGTTCAAACCAAATATGGACATGCCAT
GCTGCCTGCAGCTAACCAACATGACAGAAAATTCCATTGCCTTCAGTGTGAAGACAAACAAAAGGAAGTATAGCCCACAA
CCAAGCAAAGGAATCATACCACCATGTTCCAAGTCATACATCATTGTAACGTTGCGAGCACAGGAAGAGGCACCACCGAA
CATGCAGTGCCTCGACACGTTAATTGTGCAGAGCACAAGGGTGAGCGAGGATTTCACATCCCAAGAGATCACTCAACACT
TCCTTGAGGAAGCAGAGGTGGATGAGGTGATATTGCCAATTGCTTATGTTGCATTCGAAAAATCTGACCTCGATGTATCT
AAATAG--------------------------------------------------------------------------
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>chr7D_1_TraesCS7D01G000700
TTCTAATCAAATCACCAACCCTGGAGTGCTGCTACCCCTCTTCATAAGGGAAGAGAACATCCCCTTTCCGCCACCGTGCC
TCTCCACTGGTGCTCCAAATATACGAGCACATAGTCTTCATCCTTGAGGTGAGTTCAACTGCTCCAACTCCTGCATACCA
ATTCCTTCTACTTCTTCACATTTCTTTTTCAAAAATAAGCGTCTTCAACATTTTCTCTGATGATCCTATCATCAATTCTA
GTTAGGAATTTAGATTTGTTTTTACTCACCGTTTTTTGCATACAACAAGTCAACAGCTCTTCCTCTCCGCTAGTTAGTTC
CCACGCACTCCAGAACTTCCGCTGTTTGGGATGATAGCCCTCTTGCTTTTACTTCATATTTGATTACAACCAATATTGCT
ATTATATCATGAATAAAATCATCTTCTCGTTAAGTTTTTTTTTTCAATGCACTTCGATTATTCATTTGTTTTGCGGAATC
TATCTAATTTTGAAGGTCTTTTATCCTGTGTAATGAATCGAAAAGTGTTGTCCACAGCAGCATAACTGAATATTTTGTTC
TATTGTCATCTCATTGACAATACATTGTCGTTCTTTTTGTTCTATTGTCATCTAGTTAATATTTTATAGTCAATCCATTG
TGTTTTAGGCTATGGATTGGAGGCACTTGTAATCTTTGTTTTCTCTTTCTTTCTTTTAAGATTAAACTAAGGCCTAGGTT
TGGCTAATATTGGAAGCCACAGAAGACCTAACACTGATATGTAGACAGGAATAAAATAAGTTTGGCTGATTAACAACAAC
TCCGCAACCATCAACTATTTTTCTTTCTTTTTTCTCTTTTGCAGGCATGAACTAGCAACTCCATAGAACTAAGAAAATTA
CCATGAGTATTATTTCATCTTTAGGACACAACTGCTTTTTAAACTTGCGGCCCTCTCTTACTCTAGGCTGTCCTCAGGCA
CAATACCGACCTAGAAGATAAACACTCCTAGTTGGTGATCATGTCTTCGGAAGAGGTAACAGGTATCGAACTGAATTTGC
TAGAAAAAGTTACAAACCAATTTTCCGAGGAGCTCAAAATTGGAAGTGGTGGCTTTGGGGAAGTGTACAGGGTATGCTTA
TGAATTTTCTGTCGATTTCAAATGGTCACCTGCTACGTACTGGCTACTGCTAACAATGCATGCGTGTTGTATTTTTTTTT
CAGGGTGTGCTT-AATGGGTGTGAAATTGCTGTGAAGAAGCTTTATCTCACCAATAGATCAATAGATGATAAGAGTTTTA
CAAATGAATTTCGCCAACTTATGAAGGTCCAACATGAAAACATTATACGGCTGATTGGCTACTGCTATGAGATAAGACAT
AAGCATACTATAGACAACGGGCAACTTGTCTTTTCTCAAGTTATAGATCGAGCTCTCTGTTTCGAATACATGCCGGAAGG
AAGTCTTGCCAAGCATATTTCTGGTATTGATGTTGGTCTACCCTTAATTCAGCTATACTATTTGTCTAGTGAATAC----
-CATAATATTTTCCTT-TGGGCAGATGAATCTTGCAAACATGACTGGTCCACAACATTCAAAATAATTAAAGGGACCTGC
GAGGGCCTACACTACCTTCATAGAGGAACAGGAGACGGCAAACATATTTACCATCTGGACTTAAAACCGGACAACATATT
GTTGGATAAAGATATGGTCCCCAAAATCGCAGACTTTGGTTTGTCCAGACTCTTTGGTGAATCAAAGACCCACATAACAA
ACACCCGTATGGAGGGAACATTGTAAGCTGACGGTCTAGCATA----CATTTAGTTCCTAAGTACACATAAGTTCTAGCT
AGTACTTCTATTGCTAACTACTTGTCCAATGCTTATTGATGTCATAAAGAGGATTCATGGCACCAGAATATATACATGAG
TGTGCGATATCACCAAAGAATGATGTGTTCAGTCTCGGCGTTATAATTTTCTACCTACTGGCCGGACAGAAGGGCTACAA
CGATTATTGTGAGTCGCGGTCCTCTCCAGGGCAACAATTCATTGACAGAGTAAGTTCTGGTTCTTGTTCTTTCACATATA
TTTTCTCTTATAATATTAAAGCATAAACATCATATGTATTTGAGCTTACC-TACATTGCAATTTTGCAGGTACAAGAATA
CTGGAAAAAAAGGATGCGTGCATCGGTGGGCTACACATGGGACAAAATCGATCTCCTGGCGGTGAAGATATGCACTGAAA
TTGCAATGAGCTGTGTGGAGAAAGAGCGTAGGGACAGGCCTTCTACAAACAAGATTATTGATGAACTCCACCAACTAGAC
GCTCAAATGCAGATGTCAAAGAAAGATTCCGAGTCAGTTACAGGCCTGGTACGTACTCATCTCATGATT-----------
--------GAGGTTTATAGAATAACTGAACACTCTATCTATCATCCTTGGACATATATAAACCCCTTTTCACCTATAGGG
AAAATCCGACGTAAGATATATTGCGCTTGATCCATCACTGGAGCTGCGCTTCCCGTTCAAACCAAATATGGACATGCCAT
GCTGCCTGCAGCTAACCAACATGACAGAAAATTCCATTGCCTTCAGTGTGAAGACAAACAAAAGGAAGTATAGCCCACAA
CCAAGCAAAGGAATCATACCACCATGTTCCAAGTCATACATCATTGTAACGTTGCGAGCACAGGAAGAGGCACCACCGAA
CATGCAGTGCCTCGACACGTTAATTGTGCAGAGCACAAGGGTGAGCGAGGATTTCACATCCCAAGAGATCACTCAACACT
TCCTTGAGGAAGCAGAGGTGGATGAGGTGATATTGCCAATTGCTTATGTTGCATTCGAAAAATCTGACCTCGATGTATCT
AAATAGGTAGTTACCGCAAAGAACTTCTATCTCCGGAGTGTAATTCATTTTGAGTGTTATTTTCGGTGGCAGGATATTTG
TGAAAATTTATATTTTATAAGTCTATTTATATTTAATAAATGTTTTACATGTATACAATAATCAAATATAATATAGCATA
TGTGCACTACTAGGAAAACCCATATAGACAACCACTAAATTGTGGCGCGGGGCTGTAGGGCAGCGCTACTGCTACTTAGT
AGTAGCGCGGGCTAAAAATACACGCTACTCGTTGTGTACAGTAGTAACGCGGACATAAAAAACCGTGCTACTACCAAGTG
GGCCCCATCGTGCCCCACGGGACTGGCTACAGTAGTAGCACATAGTCTAAAATTCGCGGTACTACTAAGTAAATAGCAGT
AGCGCAGGCTCCAAACCCCGCGCCACTATTATTGCCAGCTGGTGGGTCCCACCTTGTAGTAACGCGGGGTCTTCCGGGCG
CTACTACTACTGGGGGGTTACTACTAACGCGGGGTCTTCCGGGCGCTACTACTACTGAGAGGTACGCGGGGTCTTCCATG
CCCCTCGCTACTATTATGCGTAGCAGCCACCTTTACCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATTAATGGCTCCCCTTCCTTAGTTGCTTTCTTCTCT
CTCTCCCATCTCCACATATCTCTTGCCCCTTGATGATAATCCGAGG
>chrUn_1
TTCTAATCAAATCACCAACCCTGGAGTGCTGCTACCCCTCTTCATAAGGGAAGAGAACATCCCCTTTCCGCCACCGTGCC
TCTCCACTGGTGCTCCAAATATACGAGCACATAGTCTTCATCCTTGAGGTGAGTTCAACTGCTCCAACTCCTGCATACCA
ATTCCTTCTACTTCTTCACATTTCTTTTTCAAAAATAAGCGTCTTCAACATTTTCTCTGATGATCCTGTCATCAATTCTA
GTTAGGAATTTAGATTTGTTTTTACTCACCGTTTTTTGCATACAACAAGTCAACAGCTCTTCCTCTCCGCTAGTTAGTTC
CCACGCACTCCAGAACTTCCGCTGTTTGGGATGATAGCCCTCTTGCTTTTACTTCATATTTGATTACAACCAATATTGCT
ATTATATCATGAATAAAATCATCTTCCCGTTAAGTTTTTT-TTTCAATGCACTTCGATTATTCATTTGTTTTGCGGAATC
TATCTAATTTTGAAGGTCTTTTATCCTGTGTAATGAATCGAAAAGTGTTGTCCGCAGCAGCATAACTGATTTTTTTT---
--TTGTCATCTCATTGACAATACATTGTCGTTCTTTTTGTTCTATTGTCATCTAGTTAATATTTTATAGTCAATCCATTG
TGTTTTAGGCTATGGATTGGAGGCACATGTAATCTTTGTTTTCTCTTTCTTTCTTTTAAGATTAAACTAAGGCCTAGGAT
TGGCTAATATTGGAAGCCACAGAAGACCTAACACTGATATGTAGACAGGAATAAAATAAGTTTGGCTGATTAACAACAAC
TCCGCAACCATCAACCATTTTTCTTCCATTTT------------------------------------------------
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>chrUn_936
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-------------------------------------------------------TCTTACTCAAGGTTGTCTTCAGGCA
GAGGACCGACCTAGAAGATCCACAGTCCTGATTCAATATAATGTCTTTGGAAGAGGTGACGGATCTCAAACTGAATTTGC
TAGAGGCAATTACAAACCAATTTTCCGAGAAGCTCAGAATCGGAAGTGGTGGCTATGGAGAAGTTTACAGGGTATGCTTA
TGAGCTTTCTGTCGATTCCGAGTGGCCACCTAC----TACTGGCTACTGCTAACAATGCATGCATGTTCGGTATTACTTT
ATAGGGATTGCTCAATGGGTGTGAAATTGCTGTGAAGAAGCTTTATCTCAACAATGCATCACTCGATGATAAGAGTTTTA
CAAATGAATTTCGTCAACTTATGAAGGTCCAGCATGAAAACATTATACGGCTGATTGGCTACTGCTATGAGATAAAACAT
AAGCATACTGATTACGGGGGGCAACTTGTCTTCTCTCAAGTTATAGACCGAGCTCTCTGTTTTGAATACATGCCGGAAGG
AAGTCTTGCCAAGCATATTTCTGGTA-TGATGGCGGTCTATCCTCAGTTCAGCTATACTACTTGTCTTTGATGAATACGT
ACATAATATTTTCCTTCTGGGCAGATGATTCTTGTATACATGATTGGGCCACAACATACAACATAATCAAAGGGACCTGT
GAAGGCCTTCATTATCTTCATAGAGGAAGAGGAGAGGGTGGGCATATTTACCATCTAGACTTAAAACCGGAAAACATATT
GTTGGACAAGGATATGGTTCCCAAAATCACAGATTTTGGTTTGTCGAGACTCTTTGGTGAATCAAAGACCCACAAAACAA
ACACCCGTATGGAAGGAACATTGTAAGCTGATGGTCTAGCATGCATGCATATAGTTCTTTAATGCGCATAAATTCGT---
-GTACTTGTATTGCTAACGACTTGAAAAATGCTTATTGATGTCATAAAGAGGATTCATGGCACCAGAATACATAAATGAG
TGTGCGATATCACCAAAGAATGACGTGTTCAGTCTAGGCGTTATAATTTTCTACCTAGTGGCTGGACGAAAGGGCTACGG
CGAATATTGTGACTCACGGTCCTCTCCCCGGCAAGAATTCATTGATAGAGTAATTTGT-----------TTTCATAGATA
TTTTGTCTTGTAATCTTGAAGCATAAATATTATATGTGTTTGAGCTTACCCTACATCGCAATTTCTCAGGTACAAGAGTA
CTGGAAGCAAAGGATGCGTGCAACGG------------------------------------------------------
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>chr7D_1911
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-GTGTGATATCACCAAAGCATGATGTTTTCAGTCTCGGCGTTATAATTTTCTACCTGT---CTGGACGGAAGGGCTACAA
CGATTATTGTGAGGTGCGGTCCTCTCCTCGGCAAGAATTCATTGAGAGAGTAAGTTAT-GTTCTTGTTCTTTCACATATA
TTTTGCCTTATAATATTGAAGCATAAACATTAAATGTTTTTGAGATTACCCTACGTTACAGTTTTGTAGGTACAGGAATA
CCGG-AAAAAAGGATGTGTGCATCGGTGGGCTACAAATGGGAGAAAATCGACCTCCTGGCGGTGGAGATGTGCACTGAAA
TTGCAATGAGCTGCGTGCAGAAAGAGCGTAAGGACAAGTCTTCCACAAACAAGATTATTGATAAACTCCACGAAGTAGGT
GCTCAAATGGAGATGTCAAAGAAAGATACCGAGTCACTTACACGCCTGGTACGTACACACCTCATGAGCGAGTACTCACC
TCATGAGCGAGTTTTATGAAATAAATGAACACTCTATCCATCATTCTTGGACATATATAAATCCCTCTTCCCCTGTAGGG
AAACTCAGAGATCAGATATATTGCGCTTGATCCGTCACTGGAGCTGTGCTTCCCGTTCAAGCCAAATATGGACATGCCAT
GCTGCCTGCAGCTAATCAACAAGGCGGACAATACCATTGCCTTCACTATAAAGACCAACTAAAGGAAGTATAGCCCACAA
CCAAGCAAAGGAATCATGCCACCATGCTCCAAGTCTTGCATCATTGTAACGTTGCGAGCACAGGAAGAGCCACCACCGAA
CATGTAGTGCCTGAACACGTTAATTGTGCAGAGCATAAGGGTGAGTGAGGATTTCACATCCCAAGGTATCACTCAATTTT
TCCTCGAAGAAGTAGAGGTGGATGAGGTGATACTGCCGATTTCTTATCTTCCAATAGAACAATCTGACCTCGACGTATCG
AAATAGGTAGTTAATGTCAAGAACTTGTAACTCCTGAGTGTAATTCATTGAAC--GTTATTTTCTGTAGCCGGATATGTG
T-------------------------------------------------------------------------------
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>SNPs
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-------------------------------------------------------------------S------------
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--------------------------S-------------S---------------------------------------
-----------------------------------------------------S---------------S-S----SSSS
SS------------------------------------------------------------------------------
--------------------------S---------------------------------------------------S-
--------------------------------------------------------------------------------
---------------S---------S-S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S---S----S-------
S-SS---------------SS---S----SS--SSSS--S-------S---------S--S-S-S--S------------
----SSS-S--------------------S------S---S-------------S---S-----S---------------
---SS------------S-S-S---S-----S-SSSS--------------------------S----SSS-S--SS---
SSS--SS-SSS---------------------------------------S----SS----S-S----------------
-------------S-----------------S-------------------------------------------S----
---------SSSS--SSS--------------S--------------S--------------S-----------------
--------------------------S-----SS------S---S-S-------------S------SSSSSSS-S----
----------------------------S-----S-S------S---S---------S---S-----S-----------S
--S-----S--S--S-------------S------S--SSSS--------------S--------------S--------
------S--S--------S---------S----S-----------S----------------------------S-----
-------------S-----------------S----------S-------S------S-S-S-S-S-----S---SSSSS
S------S----------S-----SSS-------------------------------------------S---S-----
---------------------------------------------------------S----S----S------------
---------------------------SS-----S----------S----------S-S---------------------
----S------------S------------S------S------------------------------------------
-----------------------------------S------S--------S------------S----S----------
-------------S---S------------S-----S-S----S------------------S--------S--S---SS
---------S-----------------S--------S-----S-------------S--S-------SS-----------
-----------S-----SS-----S-------------S-----S----------------S----S---S---S-----
---S--S--SS-S--------------------S------------S-------------S-------------------
---------------S-----S-S-S--S---S------------S-S-S-----S---S--------------------
-----------------S--------S--------S-S-------------------------------S----------
----S-------SS---------------------S---------S-------------------SS---------SSS-
----S--S----S-------------------S----S---S-----S--S--S-S---S-------------S-----S
-------------SS-SS--------S--S----S--------------SSSSSS---------S--S--S------S--
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_944
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--------------------------------------------TTGCGGCCCTCTCTTACTCT----------------
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>reverse_2808
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-------GGAAGCAGAGGTGGATGAGG-----------------------------------------------------
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>forward_1642
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----------------------GAGGAACAGGAGACGGCAAA--------------------------------------
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>reverse_3300
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-------------------GCGCCACTATTATTGCCAGC-----------------------------------------
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