>input_sequence_42254
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---------A-------TGGGGCCTCTTCCGCCGCTCGTATTCTCACTCTTTCTCCTACCTCTCCTCTACTTGTTCTTCA
GGAGCGGTAGCAAGGGAGCATCAACACACGGCGCAAGAAACGCTCCCGGGCCCCCGAAACAGCTTCCCGTGCTCGGCAAC
CTCCTGCAGCTCGGCGGCCGGCCACACCGGTACTTCCAGTCGCTCACCCAGAAGTACGGGCCGGTGTTGCAGGTGCAGCT
TGGTCGCGTGCGGATGGTCGTCGTCGCGTCGCCTGAGGCGGCCAAGGAGGTTCTCCGGACGAACGACCCGCACTGCTGCA
GCCGGCCAAATTCACCAGGCAAGTGTGTAGTCCAAA--------TCTGTACTTTTCTAGCTCTACAACCACTCACAACTC
CTCGGACCTATTTAGAATCTTCTTTAACTACAGCAAAATTTGCTCAAATTCCAGTCGCCTGAAATAGCATTATTGGAGGC
GTACAAATTTAGCAAAAGCATCGCTGCAAATTTTATTTTAGTTTAAAATTCTGTATATCGGA-ATATGAACGTACTTGGA
ATCGGATGTTGTCACCACGCAGGTGCAAGGATGCTGAGCTACAACTTCCTCGACGTGGCTTTCGGCCCCTACAGCGACTA
CTGGCGCGAGATGCGAAAACTCCTCGTCCTGGAGCTGCTGAGCATGAGGCGCGTCCAGTCCTTCGCCTACGCCCGGGCTG
CCGAGGTCGACCGCCTCGTCTCCTCCCTCGCCGGCACCCCTCCGGCAACCCCCGTCGACCTCAGCGAGAAGCTGTACGCG
CTCTCGGACGGCATCATCGGCACGGTGGCCTTCGGGAAGATGTACGGGTCGGAGTCGTTCGAGAGGACCAGCTTCCAGCG
GATGATGGACGAGACGCTGCGGGTGCTCGGCAGTTTCACGTTCGAGGACTTCTTCCCATCGTGGGCGCTCGCACGGTGGG
CGGACGCCCTGACCGGAGTGGCGTCGCGGCGGCGGAGGGTCTTCCTAAAGATCGATAGGTTCTTCGACGCGGTTATCGAC
AAGCACCTGGAGCCGGAGAGGCTGGCGGCCGGGGTGCAGGAGGACATGGTCGATGCGCTGGTGAAGATGTGGAGGGATCA
GGATGGGCCTCTGGCGCTGACGCGTGATAACATCAAGGGAATCCTGATGGTATGGTTCGTTCTACTACAATAGTGCACAA
TCTACATTCAGTTACTGCTAAATATTGGACAATTTGATGTCTCAAAACTCATTATGTTAATTTTCATTTCAGGATACATT
CACCGGTGGAATCGACACTTGTGCTGTCACTACGATCTGGATCATGTCAGAGCTGATGAGGAACCCAAGGGTGATGCGGA
AGGCGCAGTCCGAGGTGCGCGCCGCAGTCCGGAGCAAATCTAGAGTGGACGAAGAAGATGCCCAAGGCCTCAAGTACCTC
AAGATGATAGTGAAGGAGAACTTCAGGCTGCACCCACCGGGCACTCTGCTGATTCCAAGAGAAACCATGCACAGCTGCGA
GATCGCTGGCTACAGCGTGCCCGCGGGCACAAGGATACACGTGAACGTTTGGGCCATGGGGAGAGACCCGGACATATGGG
ACAGGCCGGAGGAGTTCTTCCCCGAGCGGTTTGAGGACGCGCACGTTGATTTCAGGGGACTGCACTTCGAGCTCCTTCCG
TTCGGGTCGGGACGAAGGGCTTGCCCCGCCATCGCCATGGGCGTGGCGAATGTGGAGGTGGTGCTGGCTAATCTGTTGTA
CTGCTTCGACTGGGAGCTTCCCAAGGGGATGAAGGAGGACGACATCGACATGGAGGAAACAGGGCAGCTTGTTTTCCGCA
AGAAGGTTGCTCTTGAGCTTGTCCCTGTTAAGCGGCACTGA---------------------------------------
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>chr7B_1_TraesCS7B01G253300
CAATCATGGAGCTGTCAAGGTGGCTAGGACAAGTTTTAAGGGTGTTGATGTGCGCATCATCAGGGCATCTCCGACAGATG
ATACTTCCTCTATTTTTGTATTTTTCATGTCAAATTTTGATTTATGATTTTGGTCAAGATAATATGAGTTATATGTCAAA
AAAAAAATCCTATTTCGAACTGAAGACTAATGTGAACATAAATATTAAACATGCCACAATTATAAGGGATAAGTTTGATA
CG----------TGCACTAATATAATATAATACCCTGTTGATATAATGATTGTATGCATCGCTTTGATACAGAGGCACAG
GTACCCCTTCTTTTTGAAAAGAAAGTAAAAGAAAAAGAAAAAAAATTAGGATGCACTAATGCGCAAATAAAAAATACGCA
CTAATGCATGCTACATGGTAGAGAGTATGTCATGTCTAAGATCACATTGCTATGAGAACTAGGCTAGCCTAGTGGCAAAG
TGTGGCGAGAGTTCAAATCTCGTCGGGAGTGAATTTTTGATTCCTCACCGGATGGGCTTGTTCTATAAAAATATGTCTTA
GATGCTAATGTTCATGGATCTCATTTTTTTTTAGATCACACGGCTATTTGGA--TATCAAGACTTCTTATCCAACAATTA
CATCGATTTTGATTATGTGTTCATTGTGAAAGCATATGTTTTTTTTACGTGAAGTGAAAACATATGCTTGCTAGCTGGTG
GATTGTGATATGCTGATGGTATGATATGATGGACATGCATCACTTGTTGATTTTACATGACTCATATACATGAAAACTAG
GTGGTTGATTCTAACTA--TTTAAATAGAAAGGACAAAACT---ATAAATGATGTAATAGATATAGACAAGATAAG----
--------------------CGATCGTTCAA-GCCATTGCAGTGCACTCGCCCACTCCCCCTCATCTTGTCTCACTTGAG
CACTGACAGCTATCATCTGCCCCACATTAAGTACTCCACACACCGTCACCATGGCTGCTTCTTCTCCT-------CCCAA
CCCATCACCA-------TGGGGCCTCTTCCGCCGCTCGTATTCTCACTCTTTCTCCTACCTCTCCTCTACTTGTTCTTCA
GGAGCGGTAGCAAGGGAGCATCAACACACGGCGCAAGAAACGCTCCCGGGCCCCCGAAACAGCTTCCCGTGCTCGGCAAC
CTCCTGCAGCTCGGCGGCCGGCCACACCGGTACTTCCAGTCGCTCACCCAGAAGTACGGGCCGGTGTTGCAGGTGCAGCT
TGGTCGCGTGCGGATGGTCGTCGTCGCGTCGCCTGAGGCGGCCAAGGAGGTTCTCCGGACGAACGACCCGCACTGCTGCA
GCCGGCCAAATTCACCAGGCAAGTGTGTAGTCCAAA--------TCTGTACTTTTCTAGCTCTACAACCACTCACAACTC
CTCGGACCTATTTAGAATCTTCTTTAACTACAGCAAAATTTGCTCAAATTCCAGTCGCCTGAAATAGCATTATTGGAGGC
GTACAAATTTAGCAAAAGCATCGCTGCAAATTTTATTTTAGTTTAAAATTCTGTATATCGGA-ATATGAACGTACTTGGA
ATCGGATGTTGTCACCACGCAGGTGCAAGGATGCTGAGCTACAACTTCCTCGACGTGGCTTTCGGCCCCTACAGCGACTA
CTGGCGCGAGATGCGAAAACTCCTCGTCCTGGAGCTGCTGAGCATGAGGCGCGTCCAGTCCTTCGCCTACGCCCGGGCTG
CCGAGGTCGACCGCCTCGTCTCCTCCCTCGCCGGCACCCCTCCGGCAACCCCCGTCGACCTCAGCGAGAAGCTGTACGCG
CTCTCGGACGGCATCATCGGCACGGTGGCCTTCGGGAAGATGTACGGGTCGGAGTCGTTCGAGAGGACCAGCTTCCAGCG
GATGATGGACGAGACGCTGCGGGTGCTCGGCAGTTTCACGTTCGAGGACTTCTTCCCATCGTGGGCGCTCGCACGGTGGG
CGGACGCCCTGACCGGAGTGGCGTCGCGGCGGCGGAGGGTCTTCCTAAAGATCGATAGGTTCTTCGACGCGGTTATCGAC
AAGCACCTGGAGCCGGAGAGGCTGGCGGCCGGGGTGCAGGAGGACATGGTCGATGCGCTGGTGAAGATGTGGAGGGATCA
GGATGGGCCTCTGGCGCTGACGCGTGATAACATCAAGGGAATCCTGATGGTATGGTTCGTTCTACTACAATAGTGCACAA
TCTACATTCAGTTACTGCTAAATATTGGACAATTTGATGTCTCAAAACTCATTATGTTAATTTTCATTTCAGGATACATT
CACCGGTGGAATCGACACTTGTGCTGTCACTACGATCTGGATCATGTCAGAGCTGATGAGGAACCCAAGGGTGATGCGGA
AGGCGCAGTCCGAGGTGCGCGCCGCAGTCCGGAGCAAATCTAGAGTGGACGAAGAAGATGCCCAAGGCCTCAAGTACCTC
AAGATGATAGTGAAGGAGAACTTCAGGCTGCACCCACCGGGCACTCTGCTGATTCCAAGAGAAACCATGCACAGCTGCGA
GATCGCTGGCTACAGCGTGCCCGCGGGCACAAGGATACACGTGAACGTTTGGGCCATGGGGAGAGACCCGGACATATGGG
ACAGGCCGGAGGAGTTCTTCCCCGAGCGGTTTGAGGACGCGCACGTTGATTTCAGGGGACTGCACTTCGAGCTCCTTCCG
TTCGGGTCGGGACGAAGGGCTTGCCCCGCCATCGCCATGGGCGTGGCGAATGTGGAGGTGGTGCTGGCTAATCTGTTGTA
CTGCTTCGACTGGGAGCTTCCCAAGGGGATGAAGGAGGACGACATCGACATGGAGGAAACAGGGCAGCTTGTTTTCCGCA
AGAAGGTTGCTCTTGAGCTTGTCCCTGTTAAGCGGCACTGATGTCTCTTCATTTATATCTATATATACCAATATAAAAAG
ACCCAAAGGGGCAGATCCAATTAATTTTGGTCATCAAATCATGTCAATTCAACGACCTAGACTGTGTCAATGTCGAGCGC
TCAACATGTTTAGCGTGCAGTTAATTTCATGTCAAATATAATTTTAATTACATAATACTCCAAATATATACTCCAACCGG
CCTGTTGAATATATTGTGTACATGTATATTATGTCTTGGGCCCACCTCCTACTTC-ATCTGTATAGTTGAGGTTGTGGCA
TCTCTCTGTACATCATATATATACGTATCTGGTGCACCGATCATTACAATTGTGTTGCACACCTTATTCTAG-TCTTCCA
CATGGTATCTATAGCAG-AAGTTC---CTAGACCTAGCCGCCGCCGCCA-------------CCT---------------
--GCTGCCGCC-------------------------GCCGCTAGTCGCCGTAGCCCTCCCACCACCCGTCG-TGCCACAC
GCCGCCGCCGCGGCTTCTTCCTCAAGCCGCCGCCGCCGCAGGTCGCCGCCGCGATCCCCTGCTTCCGCACCCCTCCTCCC
-ACTCCGCGTCGCTCTT--CACCCCACCCCGCGCCG----------------------TACCTACCCG------------
-------CCT---------------------ACTCCACCCGCGCC----------------------GAACCCTAACCCT
AGCTCCA----CCCCGCCGCACCTTCCCCCTCCCTCCTCGATGCGCCATGAGTTCGTC---GTCCTCCACCATATCCAAC
CCCTTCGTTGGTCCCGATGTCACCCTCGTCCATGATCTCAATATCCACGAGCGTGTTCCGGTGGTGCTTGATCATTCCAT
CGCGTCCTACTCCGCTTGAAAGCGGTACTTCTC---GGTGTTTCACGAGTACCTGCTCCACGCCCACGTCGATGGCACCA
TGGACTCGAGCCTCATGATTCACGACGAGGAGTGGATGATCCTCGACGCCACCATCATCCGCTGGTTCTACCTCACCATC
TCCAACGACCTCTTCCACAAGGTGGTGGATGATGACGACGACGCCTACGACGTTTGGACCAAGCTCAACGGCCTCTTCAC
>chr7D_1
CAATCATGGAGCTGTCAAGGTGGCTAGGACAAGTTTTAAGGGTGCTGATGCGCGCATCATAAGAGCATCTCTGACAAATG
ACACTTCCTCTATTTCTGTATTTTTCATGTCAAATTTTGATTTATGATTTTGGTCAAGATAATATGAGTTATGTGTCAAA
AATAATATCCTATTTGGAATTGAAAACTAGTGTGAACATAGAGATTAAACATGCCACAATTATATGGGATAAGATTTATA
CCCTATTTAGAATGCACTAATATAATATAATA-----------TAATGGCTGTATGCATCGCTTTGATGTAGAGACTGAC
GTATCCCTTCTTTTTGAAAAGAAA-------------AAAAAAATTTGGAATGCACTAATGCGCAAAAAAGA-----GCA
CTAATGCATGCTACATGGTAGAGAGTATGTCATGTCTA------------------------------------------
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--------------------------------AGATCGCACGGCTATTTGGTATTATCAAGACATCTTATGCAACAATTA
CA-CGATTTTGATTTTACATGGTAGAGAGCAATGCATCACTTGT------------------------------------
-----------------------------TGGACATGCACCACTTGTTGATTTTACATGACTCATATACAGGAAAACTAG
GTGGTTGGTTCTAACCATTTTTAAATATAAAAGACAAAACGATAATAAATGATGTAATAGATATAGACAAGATAAGGATC
GGAGATCCGCGGATTCAAAGCGATCGTTCATCGCCCGGCT----------------------------------------
-----------------------ACATTAAGAACTC--CAGACCGTCACCATGGCTGCTTCTTCTCCT-------CCCAA
CCCATCACCATGGTCCATGGGGCCTCTTCCGCCGCTCGTATTATCACTCTTTCTCCTACCTCTCCTCTACTTGTTCTTCA
GGAGCGGCAGTAAGGGAAGGTCGACACAGGGAGCAAGAAACGCACCCGGGCCCCCGAAACAGCTTCCCGTGCTCGGCAAC
CTCCTGCAGCTCGGCGGCCGGCCACACCGGTACTTCCAGTCGCTCACCCAGAAGTACGGGCCGGTGGTGCAGGTGCAGCT
CGGCCGCGTGCGGATGGTCGTCGTCGCGTCGCCTGAGGCGGCCAAGGAGGTTCTCCGGACGAACGACCTGCACTGCTGCA
GCCGGCCAAATTCACCAGGCAAGTGCGTAGTTCGAATCTGTACT------------------------------------
-----T--------------------------------------------------------------------------
-----------------------------------TTCTAGCTCAAAAAT-----TATCGGA-ATATGAACGTACTTG--
-----ATGTTATCACCACGCAGGTGCAAGGATGCTGAGCTACAACTTCCTCGACGTGGCTTTCGGCCCCTACAGCGACTA
CTGGCGCGCGATGCGAAAGCTCCTCGTCCTGGAGCTGCTGAGCATGAGGCGCGTCCAGTCCTTCGCCTACGCCCGGGCCG
CCGAGGTCGACCGCCTCGTCTCCTCCCTCGCCGGCACCCCTCCGGGCACCCCCGTCGACCTCAGCGAGAAGCTGTACGCG
CTCTCGGACGGCATCATCGGCACGGTGGCCTTCGGGAAGATGTACGGGTCGGAGTCGTTCGAGAGGACCAGCTTCCAGCG
GATGATGGACGAGACGCTGCGGGTGCTCGGCAGTTTCACGTTCGAGGACTTCTTCCCGTCGTGGGCGCTCGCACGGTTGG
CGGACGCCCTGACCGGCGTGGCGTCGCGGCGGCGGAGGGTCTTCCTAAAGATCGACAGGTTCTTCGACGCGGTTATCGAC
AAGCACCTGGAGCCGGAGAGGCTGGCGGCCGGCGTGCAGGAGGACATGGTCGATGCGCTGGTGAAGATGTGGAGGGATCA
AGATGGGCCTCTGGCGCTGACGCGTGATAACATCAAGGGAATCCTGATGGTATGCTTCGTTCGACTACAAT---------
-CTACATTCAGTT---------TATCGGACAACT-GATATCACAAAATTCATTATGTTAATTTTCATTTCAGGATACATT
CGCCGGTGGAATCGACACTTGTGCTGTCACTACGATCTGGATCATGGCGGAGCTGATGAGGAACCCAAGGGTGCTGCGGA
AGGCGCAGTCCGAGGTGCGCGCCGCGGTGCGGAACAAATGTAGAGTGGACGAAGAAGATGCCCAAGGCCTCAAGTACCTC
AAGATGGTAGTGAAGGAGAACTTCAGGTTGCACCCACCGGGGACTCTGCTGATTCCAAGGGAAACCATGCAGAGCTGCGA
GATCGCAGGCTACAGCGTGCCTGCGGGCACCAGGATACACGTGAACGTTTGGGCCATGGGGAGAGACCCGGACATATGGG
ACAGGCCGGAGGAGTTCTTCCCCGAGAGGTTTGAGGAGGCGCACGTTGATTTCAGGGGACTGCACTTCGAGCTCCTTCCG
TTTGGGTCGGGGCGAAGGGCTTGCCCTGCCATCGCCATGGGCGTGGCCAATGTGGAGGTCGTGCTGGCCAATCTGTTGTA
CTGCTTCGACTGGGAGCTTCCCGAGGGGATGAAGGAGGACGACATCGATATGGAGGAAACAGGGCAGCTTGTTTTCCGCA
AGAAGGTTGCCCTTGAGCTTGTCGCTGTTAAGCGGTAGTGATATATCT--------------------------------
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>chr7A_857
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-------------------------------------------------------------------------AAG----
--------------------CGATCGTTCAAAGCCATGGCAGGGCACTCGCCCACTCTCCCTCATCTTGTCTTACTTGAG
CACCGGCAGCCATCATCCGCCTCCCATTAAGAACTC--CAGACCGTCACCATGGCTGCCTCTTCTCCTCCCAAGTCCCAA
CCCATCACT-------ATGGGGCCTCTTCCGCCGCTCGTATTAGCACTCTTTCTCCTACCTCTCCTCTACTTGTTCTTCA
GGGGCGGTAGCAAGGGACGATCGACACAGGGAGCAAGAAACGCTCCCGGGCCGCCGAAACAGCTTCCCGTGCTCGGCAAC
CTCCTGCAGCTCGGCGGCCGGCCACACCGGTACTTCCAGTCGCTCACCCAGAAGTACGGGCCGGTGGTGCAGGTGCAGCT
CGGCCGCGTGCGGATGGTCGTCGTCGCGTCGCCTGAGGCGGCCAAGGAGGTTCTCCGGACGAACGACCTGCACTGCTGCA
GCCGCCCAAATTCACCAGGCAAGTGTGTAGTTCGAATCTGTAGTTCTGTACTTCTCTAGCTCTACATCCACTCACAAGTC
CTCAAT--------------------------------------------------------------------------
-----------------------------------TTTTAGTTCAAAATT-----TGTATCGGATATGAACGTACTTGGA
TGTTGC---TATCACCACGCAGGTGCGAGGATGCTGAGCTACAACTTCCTCGACGTGGCTTTCGGCCCCTACAGCGACTA
CTGGCGCGAGATGCGGAAGCTCCTCGTGCTGGAGCTGCTGAGCGTGAGGCGCGTCCAGTCCTTCGCCTACGCCCGGGCCG
CAGAGGTGGACCGCCTTGTCTCCTCCCTCGCCGGCACCCCTCCGGGCACCCCGGTCGACCTCAGCGAGCAGCTGTACGCG
CTCTCGGACGGCATCATCGGCACGGTGGCCTTCGGGAAGATGTACGGGTCGGAGTCGTTCGAGAGGACCAGCTTCCAGCG
GATGATGGACGAGACGCTGCGGGTGCTCGGCAGCTTCACGTTCGAGGACTTCTTCCCGTCGTCGGCGCTCGCACGGTGGG
CGGACGCCCTCACCGGCGTGGCGTCGCGGCGGCGGAGGGTCTTCCTCAGGATCGATAGGTTCTTCGACGCGGTCATCGAC
AAGCACCTCGAGCCGGGGAGGCTGGCGGCCGGGGTGCAGGAGGACATGGTCGACGCGCTGGTGAAGATGTGGAGGGATCA
AGATGGGGCTCTGGCGCTGACGCGTGATAACATCAAGGGAATCCTGATGGTGCGGTTCGTTCGAC----------CACAA
TCTACATTCAGTTACTGCTAA-TATTGGACAACC-GATGTCACAGAATTCATCATGTTAATTTTCATTTCAGGATACATT
CGCCGGTGGGATCGACACTTGCGCTGTGACGACGATCTGGATCATGGCGGAGCTGATGAGGAACCCAAGGGTGATGCGGA
AGGCGCAGTCGGAGGTACGCGCCGCGGTGGGGAACAAATCCAGAGTGTACGAAGAAGACGCCCAGGGCCTCAAGTACCTC
AAGATGATAGTGAAGGAGAACTTCAGGCTCCACCCGCCGGGGCCTCTGCTGATCCCAAGAGAGACCATGCAGAGCTGCGA
GGTCGCCGGCTACAGCGTGCCCGCGGGCACCAGGATACACGTCAACGTCTGGGCCATGGGGAGAGACCCGGAGATATGGG
ACAGGCCGGAGGAGTTCTTCCCCGAGCGGTTCGAGGACGCGCAGGTTGATTTCAGGGGGCTGCACTTCGAGCTCCTTCCG
TTCGGGTCGGGACGAAGGGCCTGCCCTGCCGTCGCCATGGGCGTGGCCAATGTGGAGGTCGTGCTGGCCAACCTGTTGTA
TTGCTTCGACTGGGAGCTTCCCGAGGGCGTGAAGGAGGACGACGTCGATATGGAGGAAACAGGGCAGCTTGTTTTCAGCA
AGAAGGTGGCTCTTGAGCTTGTGCCAGTTAAGCGGTAGTGATATCT----------------------------------
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>chr7B_3057
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-CTGTTGAATACATTATGTATGTGTATATTGTGTCTTGGGCTCACCTTCTAGTTTTTTCTGTATAATTAAGGTTGTAGTC
TCGTCATGTACACCATA--TATATATGTTTGGTGCACCGATCAATGTAATTGTGTTGCATAGTCTATTCTAG-TCTTCTA
CCTGGTATCTATCGCACGTCGTTC---CCAGACATAGTCGCCGCCGCCT-------------GCC---------------
--GCCGCCGCTGCCGGTTCCTCCGGTCGCCACTGCTGCTGCTGGTCGGCGCCGCCCTCCTACCCGACGCTGCCGCCACCC
GCCGCCGTCGCGACTTCCTCCTA-----GCCGCCGCCGCCGGTCGCCGCCGCACCCCTCAGCTTCCACGCCCCTCTCCCA
---CCCGCGCCGCTCCTCCCTCTCCCACCCGCGTCAC--------------------------ACCTT------------
-------CCT---------------------CTTCAACCCGTGCT----------------------GAACCCTGACCCT
AGCCGCCCCACCCGCGCCGTACCTTCCCACTTCCTCCTCGATGCATCATGAGTTCCTT---CTCCTTCACCGTCTCCAAC
CCCTTCACCGGTTTTGATGTCACCTTCGTCCGTGATCTCAACATCCACGAGCGTGTTCCTGTGGTGCATGATCAATCCAC
CGCGTCCTACTCCGCTTGAAAGCGGTACTTCTCCTTGGCGTTTCGCGAGTACCTGCTCCACGGCCACGTCGATGGCACCA
TGGACTTGAGCCTCATGATTCACGACGGCGAGTGGATGATCCTCGACGCCACCATCATCCACTGGTTCTACCTCACCATC
TCCAAGGACCTCCTCCACACGGTGGTGGATGATGACCACGACGCCTCCGCCGTCTGGACCAAGCTCAACGGCCTCTCCAC
>chr1D_3057
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-CTGTTGAACATATTATGTACGTGTATATTGTTTATTGGGCCCACCTCCTAGTTC-ATCTGTATAGTTGAGGTTGTGGCC
CCCCTCTATACATCATATATATACGTGCCTAGTGCACCGATCAATGCAATTGTGTTGCACAGCCTATTCTAG-TCTTCTA
TATGGTATCTATCGCAGAAAGTTC---CTAGACCTAGCCGCCGCCGCGTCATCTCGC----CGCC---------------
--GCCGCTGCCGTCGGGCTTTCCGATCGA-------------CGTCGCCGCCGCCCTCCCACCACCCGTCG-CGCCACCT
GCCGCCGTCGCGGCTTCTTCCTCAAGCCGCCGCCACCG----TCGCCGCCACGA-CCCCTGCTTCCGCACCCCTCCTCCC
CACGCCGCGCCGCTCCTTCCTTCCCACTCCGCGCCG----------------------CACCTACCCG------------
-------CCTGCCCACCCATGCCGCCACCCCAACCGACCCGAGCC----------------------GAACCCTAACCCT
AGCCACTCCACCCACGTCGCGCCTTCCCACTCCCTCCTCGCTGCGCCATGAGTTCCTCCTCCTCCTCCACCGTCTCCAAC
CCCTTCGTTGGTCCCGATGTCACCCTCGTCCGTGATCTCAACATCCACGAGTGCGTTCCGGTGGTGCTTGATCAATCCAC
CGCGTCCTACTCTGCTTGGAAGCGGTACTTCTCCCTGGTGTTTCGCGAGTACCTGCTCCACGGCCACGTCGATGGCACCG
TGGACTCGAGCCTCATGATTCACGACAAGGAGTGGATGATCCTCAACGCCACCATCATCCGTTGGTTCTACCTCACCATC
TCCAAGGACCTCTTCCACACGGTGGTGGATGACGACGACGACGCCTACGCTGTCTGGAACAAGCTCAACGACCTGTTCAC
>chr3D_3057
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-CTGTTGAATATATTGTGTACGTGTATACTGTGTCTTGGGTCCACCTCCTAGTTC-TCCTATACAGTTGAAGTTGTGACC
TCATCCTGTACATC--ATATATACGTGCCTGGTGCACCAATCAATGCAATTGTGTTGCACAACCTATTCTAG-TCTTCTA
CATGGTATCTATCGCAGGTCATTT---CTAGACCTAGCCGTCGCCGCTGCCGCTGCTGCCGCGCC---------------
--TCCGCCGCCGCCGGTCCCTCCGGTCGT-------------CGCCACCCTC----------------------CCACCC
TCTGCCGCCGCGGCTTCCTCCTA-----GA-------------CGCCGCCACGCCCCTCAGCTTCCGCACCCCTCTCCCA
---GCCGCGCAGCACCTCCCTTTCCTACCCGCGTCG----------------------CACCTCCCTTCCAACCCGCGCC
GCACCACCCT---------------------TCCCAAACCGCGTC----------------------GAACCCTAACCCT
AGCCGCCCCACCCGCGTCGCGCCTTCCCACTCCCTCCTCGCTGTGCCATGAGTT---CCTCCTCCTCCACCATCTCCAAC
CCCTTCGCCGGTCCCGATGTCACCCTCGTCCATGGTCTCAACATCCACGAGCGTGTTCCGGTGGTGCTTGATCAATCCAC
CGCGTCCTACTCCGCTTGGAAGCGGTACTTCTCCTTGGTGTTTCACGAGTACCCGCTCCACGGACACGTCGATGGCACCG
TGGACTCGAGCCTCATGATTTAGGACGAGGAGTGGATGATCCTCGACGCCACAATTATCTGTTGGTTCTACCTCACCATC
TCCAAGGACATCTTCCACATGGTGGTGGATGATGACGACGACGCCTACGCCGTCTGGACCAAGCTCAATAGCCTCTTCAC
>chr1D_3058
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--TGTTGAATATA-TGTGTACGTGTATATTGTGTCTTGGGCCCACCTCCTAGTT--ATCTGTATAGTTGAGGTTGTGGCC
CCCTTTGTAC--TC--ATATATACGTGCCTGGTGCATCGATCAATGCATTGTGTTTGCACAGCCTATACTTCTTATCCTA
CATGGTATCTATCGCAGTATGTTC---CTAGCCCTAGCCGCCGCCGTCG-------------GA--------CCTTCCAG
TCGCAGCCGCC-------------------------GCTGCTCGTCACCGCCGCCCGCCCACCAACACCCG---------
-----------------TCACGCCACCCGCCGCCGCCGTCGGTCGCTGCCGCGACCTCCCCCGCTT--------------
---------TCGCACCT--CTTCCCACCCCGAGCCATCATCCCGCGCCAAACCCTCACCCCATCCCACCTAACCCGCGCC
GC--CACCCT---------------------GCCCGACCCGCGCC----------------------AAACCCTAAACCC
TAG----CCACCCGCGCCGCGCCTTCCCCCTCC-TCCTAGCCGCGCCATGTGCT---CCTCCTCCTCCACCATCTCCAAC
CCCTTCGCCGGTCCCGATGTCACCCTCGTC-GCGACCTCAACATCCATGAGCGCGTCCCGGTGGTGCTTGATCAATCCAC
TGCCTCCTACCCCGCTTGGAAGCGGTACTTCTCCTTGGTGTTTCACGAGTACCTACTCCACGGCCACATCGACGACACCG
TGGACTCGAGCCTCATGATTCACGACGAGGAGTGGATGATCCTCGACGCCACCATCATCCGCTGGTTCTACCTCACCATC
TCCAGCGACCTCTTCCACACCGTGGTGGATGATGACGACAACGCCTACGCCGTCTGGACCAAGCTCAATGGCCTCTTCAC
>chr2A_3058
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--TGTTGAATATATTGTGTACATGTATATTGTGTCTTGCGCCCGTCTCCTAATTC-ATCTGTATAGTTGAGGTTGTGGCT
TCCTTCTGTACATC--ATATATATGTGCTTGGTTCACCGATCAATGCATTGTGATTGCACAGCCTATACTTCATCTTCTA
CATGGTATCTATCGCAGGTTGGTCGACCTAACCCTAGCCGCCGCCGCCTCCCTACTTGCCGCCGCCACGCGCCCTCCGCG
CCCCCGCCACC-------------------------GTCGCCGGTCGCCGCTTCCCTACCCACT-------------CAC
GCCGCCGTTGGCGGC-CTCCCTCTAGCCGTCGCTGCCACCGGTCGCCGCTGC--TCTCCTGCTTCCGCACTCCCTCCTCC
-A--------------------------------------------CCCAACCCTAACCT---------CAACCCGCGCC
GC--CTCCCACCTGCGCCACC-------CCCACCCGAGCTGCCCC----------------------AAACCCTAACA--
--CCCCTCCATCCAACCCGCGCCG-CCTCCACCTTCGACACCGCGCCATGAGCT---CCTCTTCCTCCACCGTTTCCAAC
CCCTTCGCCGGTCCCGATGTCACCCTCGTCTGCGATCTCAACATCCTCGAGCGTGTTCCGGTGGTGCTTGATCAATCCAC
GGCGTCGTACTCCGCTTGGAAGCGGTACTTCTCCTTGGTGTTTGGCGAGTACCTACTCCATGGCCACGCCGACGACATCG
TGGACCCGAGCCTCATGATTCACGACGAGGAGTGGATGATCCTCGACGCCATCATCATCCATTGGTTCTACCTCGACATC
TCCAGCGACCTCTTCCACACGATGCTGGATGATGATGACGACGCCTGTGCCGTCTGGACCAAGCTCAACGGCCTCTTCAC
>chr6A_3143
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--------TACATC--ATATATACGTATCTAATGCACCGATCACTGCAATTGTGTCGCACGGCCTATTCTAG-TCTTCTA
TATGGTTTCTATCGCAAAAAGTTC---CTAGACCTAGCCACCACTGCCG-------------CCGGGCTTTCTG-----G
TCGCCGCCACC-------------------------GCTGTTAGTCGCCGTCGCCCTCCCACCACCCATCG-CGCCACCC
ACCA-------------------------CCGCCGCCGTCGGTCGCCGTCGCGACCCCCAGCTTCCGCACCCTTCCTGCC
CACACCACACTGCTCCTTCCTTCCCACCCCGCGCCA----------------------AACCTACCCG------------
-------CCT---------------------ACACCACCCGCGCC----------------------GAACCCTAACCCT
AGCCACTCCACCCGCGCCGCGCCTCCCCCCTCCCTCCTCGCTGCGCCATGAGTT---CCTCCTCCTCCACCGTCTTCAAC
CCCTTCGTCGGTCCCGATGTCACCCTCATCCGTGATATCAACATCCACGAGCGCGTTCCGGTGGTGCTTGATCAATCCAC
CGCGTCCTGCTCCACTTGGAAGTGGTACTTCTTCTTGGTGTTTCGCGAGTACCTGCTCCACGGCCACGTCGATGGCACCG
TGGACTCGAGCCTCATGATTCACGACGAGGAGTGGATGATCATCGACGCCACCACCATCCACTAGTTCTACCTCACCATC
TCCAACGACATCTTCCACACGGTGGTGGATGACGACGACGACGCCTACGCAGTCTGGACCAAGCTCAACGGCCTCTTCAC
>chr5D_3261
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----------------------------------------------------------------T---------------
--GCCGCCGCC-------------------------GCTGCTAGTCGACGCCGCTCTCCCACCACCTGTCG-CGCCACCC
GCCGAAGCCGTGGCCTCTTCCTCAA------GCCGCCGCCAGTTGCCGTCGCAACCCCCTGCTTCCGCACCCCTCCTCCC
CATGCCGCGCTGCTCCTCCCTTCCCACCTCGCGCCG----------------------CACCTACCCG------------
-------CCT---------------------ACCCCACCCGCGCCGCCACCCCACCCGACCTACGCAGAACCCTAACCCT
AGCCACTTCACCCGCGCCGCGCCTTCCCCCTCCCTCCTTGCTGCTCCATGAGT------TCCTCCTCCACCGTCTCCAAC
CCTTTCGCCGGTCCCGATGTCACCCCCGTCTGTTATCTCAACATCCACGAGCATGTTCCGATGGTGCTTGATCAATCCAC
CGCGTCCTACTCCACTTGGAAGCGGTACTTCTCCTTCGTGTTCCGTGAGTACCTGCTCCACGGCCATGTCGATGGCACTG
TGGACTCGAGCCTCATGATTCACGACGAGGAGTGGATGATCCTTGATGCCAGCATCATCCGCTGGTTCTACCTCACCATC
TCCAACGACCTCTTCCACACGGTGGTGGATGATGACGTTGATGCCTACGCCGTCTGGACCAAGCTCAATGACCTCTTCAC
>SNPs
--------------------------------------------S-----S---------S--S-------S----S---
-S-------------S--------------------------------------------------------S-------
--S--S---------S---S----S----S----------S-S---------------------S--------S--S---
-S------------------------------SSSSSSSSSSS-----SS------------------SS----S-SS-S
---S--------------------SSSSSSSSSSSSS-------S--S-S-----------------S--S-SSSSS---
--------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-------------S-----------S------S---------
--S-----------S-SSS-SSSSSSSSSS-SSSS--SSS--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S------------------------------S---------
-------S-------S-----------S---S--------S---------------------------------------
-------------------------------------S----S--------------S--------------S-------
---S-S----S------S---S---------S----SS--S---------------------------------------
------------------------------------------S-------------------------------------
-----------------SS---S-----S--S------------------------------------------------
------------------------------------------------------------------S-------------
S--S----------------------------------------------------------------S-----------
-------------------------------S-S-------------------S------------S----------S--
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S------SSSSS-------------------------
SSSS------S---------------------------------------------------------------------
------------------S-----------------------------------------------------------S-
---------------------------------------------SS---------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------S--------SSSS-----
---------------------S----------S-S------S-----S--------------------------------
-S--------------------------------------------S-S-------------------------------
-------------------------S--S----S----------------------------------------------
-----------------------------------------S-----------------------------S--------
------S-----------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S--------------------S-----------S--------S-----------
----------------------S-------------------------S-------------------------------
-----------------------------------S-S----S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S-----------------------------S--------------------S---------------------------S
--S----------------------------------------S-S---------------S-S--------------S-
------------S-----------------------------------S-------------------------------
----S----------------------------------------------S--------------------S-------
---------------------------------------S----------------------------------------
---S-----------S----S-------------------------------------S---------------------
--------------------------------------------------------------------------------
---S--S------S-----------------------------------------S-----S-----------S------
-----------------------------------------S--------------------------------S----S
--------------------------------------------------------------S-----------------
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-------------------S-----------------------------S---S--------------------------
>forward_494
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--------------------------------------------------------------------------GCAAAG
TGTGGCGAGAGTTC------------------------------------------------------------------
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>reverse_1531
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----------AGCAAAAGCATCGCTGCAAA--------------------------------------------------
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>forward_1500
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----------------------------------------TGCTCAAATTCCAGTCGCCT--------------------
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>reverse_3108
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-------------------------------------------------------------------ATACTCCAACCGG
CCTGTTG-------------------------------------------------------------------------
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