>input_sequence_42188
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---------------------------ATGCCCCCGCTTCCGCGCCTCTTCGCCTCCGTCAGACACATCTGCTCCAGCTC
CGCCTCCGAGCTCGCCCCGGTACCGACCGCCGTCTCTGACGCCGCCTCCCGCGCGGCAGCCGCCGTGCTCCGCGCCCCGC
GCTTCGAGCCCCGCCTCCTGTCGCTCGTCCCACGCCAACTGCTCTTCGAGCCGAGCTGCGTCCGCCAAACCCTCTCCCGT
CTCCTCCCCTCCCCTGAACCCTCGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCTTCGCCTCACCTCCCCGGGATCGACGCCT
TCCTCCTCAGCCTCCAGCCACATCTCGCCGCCGATGCCGCCGCGCTGCTAGCCTCCCACCTCCGCCTCCACCCCTCCCTG
CCCGCACTCAACGCGGCATCCCGTGCCGCTCTCCGGGCCGCGCGCCCCGACCTCGTCTTCCGCCTCTTTTCCACCTTCTC
CTCCTCCCCTGCCTTCCCAGGCAACGCGGACACCGTCGCCTGCCTCGTGCGCGCCTGTGCAGCCGACTGCCGCCCGCTCG
ATGGCCTCCGCCTCCTCCGGGATGCTGCACGACGTGGCTCCCCTCCCTCGTCTGCTGCTGCCGCCGACCTTGTCACGTCC
TTTGTGGCCATCGGCAACTTCGCAAAGGTGTCTGAGACGCTCCACCTCATGATCTCTGCGGGATGTCCTCCAGCTACGTT
TGTCTACCAGCGTGTCATACATGGGCTCTTTGCGCATGGGATGGGCGGCGAGGCCCTTCGTGTCTTCAGCGAGATCAAGC
TGCGTGGTTATGCCATAGATGTAGTCACTTACAGCACAGTGCTCACCGGTTTATGTAAAATGGGCCATATTGCCGATGCG
CAGCAGATGTGGGATGAGATGGTGGACAAAGGTATACAGCCCAGTGAGTATGCATATTGCTCTTTTCTCGATTACTACTG
TGAAGCTGGTGATTTTGGGATGGCTCTCAAGGTGTATGAAGAAATGCTTGACAAGGGGTTCAAGGAGAGCACAGTTAGCT
GTAACATTATCGCCAAAGGGTTTTGTGTTCATAGGAGGGTGGACGAAGCAGTTGGGGTGTTCAAGGGAATGGTTACTAAA
GGGATTGAACATGATGTGATAACTTATAACACGTTGATTCAGGGCCTATGCAAGGTTGGTAGGTTGGCTGAGGCGATAGG
GATGTATCAGCGGCTACTCTCATCTGGTTTGGAGCCAAGTGTGCAGACCTTCACACCACTCATTGACACCTTGTGCGAGG
AAGGACAGGTTGATCATGCTGTTGAATTACTTACCTTGATGCAGGCTAAGGGCTTGGAACCGTTGGAACGTAGCAATGAT
AGTGTCATCAATGGGTTCTGTAAGGTCAGGCGGGCTGATGATGGTATGGCATGGTTGGCTAGCATGTTGAAGAACAATCT
GAAACCTCAGGAACAGACGTTCAATTCTTTGCTGGAGTCGCTGAGGAAATCCGAGCGAATGGATGACGCACTGCTGATTC
TGAATACAATGTTTAAAGCTGGATATGAATTAGGCAGTTTGGCTTCTGCTATACTTGTTGATAAGTTATGCACAGGCAAT
GTATCTCATCCTCAAACGTTGGATGATATTTTGGTGAGCAGCTAG-----------------------------------
--------------------------------------------------------------------------------
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-------------
>chr4D_1_TraesCS4D01G162800
ATGACCAAATATCAGTTTGGTTTCATGCCTGTGAGGTCGACCATGGAAGCCATTTTCTTGGTACGACAACTTATGGAGAG
ATACAAGGAGCAAATGAAGGACCTGCATATATTGTTCATTGACTTGGAGAAGGCCTATGATAAGATACCACGGAATGTCA
TGTGGTGGGCCTTGGAGAAACACAAAGTCCCAGCAAAGTACATTACCATCGTCAAGGACATGTACTATAATGTTGTGCCA
AGTGGTCGAACAAGTGACGGCGACATTGATGACTTCCTGATATGATGTACATTACCTTCATCAAGGACATGTACTATTTA
AACCAAGCAACACATCATCCCATATGTACCATAGTTACGCTTTGAAAACAAGCATGCATAGAATTAATCAAGTA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------ATACATAAGACTGAATAGAATCAACAACCAAACCGAATCATCGATATGATGTACT------
--------------------------------------------------------------------------------
---------TGCACGCAGTAACTATGTAATGATAAACAGATTCAAAGACATACTTCTTCTCCCAAGAGTTACGGCTGGGA
AGGG--------------GGGAGGGGAAGGCACCTGGCGGTGAGTGAAATGTTGCGGACCAGGAGGCCGGTGGGCGCCGA
CGGTCGGTCGTACCCGCGGCGGGGCCCGCCGCCGCCG---CCGCGGTAGCGGTCACGCGGGTCGTCGTAGTGCCTGTAGC
GGGGAGGACTGCGGCTGTAGCGCCTGCGTGGGCTGTAGCTACGGCTTCGGCTGCGGCTGCGGTACCCGGCCATCGACGAG
CGCGTG------AGTTAGGGTTTCTGTGAGGCTTGGATAATAACTTTATTTACGAAAGGCGAGAGAGAGAGAGAGTAGAT
CATGGCTTTTAACTTGAAGCACACGCGGGCCTCATGGCCCATGGGCCGTAGTGCCAATCCAAGTCAAAACCTCGCGAGCC
GCATCGCCACCAAATCTGACCA-CCCCCCGGTCCCCGTGCGGCTCACGACAGCATCACATTCTCCTCC---CGTCGCCGC
CGCCGCCGCTCGCCGCGGATCACCACCATGCCCCCGCTTCCGCGCCTCTTCGCCTCCGTCAGACACATCTGCTCCAGCTC
CGCCTCCGAGCTCGCCCCGGTACCGACCGCCGTCTCTGACGCCGCCTCCCGCGCGGCAGCCGCCGTGCTCCGCGCCCCGC
GCTTCGAGCCCCGCCTCCTGTCGCTCGTCCCACGCCAACTGCTCTTCGAGCCGAGCTGCGTCCGCCAAACCCTCTCCCGT
CTCCTCCCCTCCCCTGAACCCTCGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCTTCGCCTCACCTCCCCGGGATCGACGCCT
TCCTCCTCAGCCTCCAGCCACATCTCGCCGCCGATGCCGCCGCGCTGCTAGCCTCCCACCTCCGCCTCCACCCCTCCCTG
CCCGCACTCAACGCGGCATCCCGTGCCGCTCTCCGGGCCGCGCGCCCCGACCTCGTCTTCCGCCTCTTTTCCACCTTCTC
CTCCTCCCCTGCCTTCCCAGGCAACGCGGACACCGTCGCCTGCCTCGTGCGCGCCTGTGCAGCCGACTGCCGCCCGCTCG
ATGGCCTCCGCCTCCTCCGGGATGCTGCACGACGTGGCTCCCCTCCCTCGTCTGCTGCTGCCGCCGACCTTGTCACGTCC
TTTGTGGCCATCGGCAACTTCGCAAAGGTGTCTGAGACGCTCCACCTCATGATCTCTGCGGGATGTCCTCCAGCTACGTT
TGTCTACCAGCGTGTCATACATGGGCTCTTTGCGCATGGGATGGGCGGCGAGGCCCTTCGTGTCTTCAGCGAGATCAAGC
TGCGTGGTTATGCCATAGATGTAGTCACTTACAGCACAGTGCTCACCGGTTTATGTAAAATGGGCCATATTGCCGATGCG
CAGCAGATGTGGGATGAGATGGTGGACAAAGGTATACAGCCCAGTGAGTATGCATATTGCTCTTTTCTCGATTACTACTG
TGAAGCTGGTGATTTTGGGATGGCTCTCAAGGTGTATGAAGAAATGCTTGACAAGGGGTTCAAGGAGAGCACAGTTAGCT
GTAACATTATCGCCAAAGGGTTTTGTGTTCATAGGAGGGTGGACGAAGCAGTTGGGGTGTTCAAGGGAATGGTTACTAAA
GGGATTGAACATGATGTGATAACTTATAACACGTTGATTCAGGGCCTATGCAAGGTTGGTAGGTTGGCTGAGGCGATAGG
GATGTATCAGCGGCTACTCTCATCTGGTTTGGAGCCAAGTGTGCAGACCTTCACACCACTCATTGACACCTTGTGCGAGG
AAGGACAGGTTGATCATGCTGTTGAATTACTTACCTTGATGCAGGCTAAGGGCTTGGAACCGTTGGAACGTAGCAATGAT
AGTGTCATCAATGGGTTCTGTAAGGTCAGGCGGGCTGATGATGGTATGGCATGGTTGGCTAGCATGTTGAAGAACAATCT
GAAACCTCAGGAACAGACGTTCAATTCTTTGCTGGAGTCGCTGAGGAAATCCGAGCGAATGGATGACGCACTGCTGATTC
TGAATACAATGTTTAAAGCTGGATATGAATTAGGCAGTTTGGCTTCTGCTATACTTGTTGATAAGTTATGCACAGGCAAT
GTATCTCATCCTCAAACGTTGGATGATATTTTGGTGAGCAGCTAGTGGCATTTGGATGCCCTGCAAAACGTACAAATGTT
CATTTGTTTCTCCCTGGATTGATGTCTTTGAGAAATGTTTTTATTGGTGTTGTCCAAGAGGCTACACAAATGACTTATGT
AGAAATTCAGAATCCTGATGACCAAGAACTTGACTTTTGAGGTTCATATTCAGATTATAACTTGGCCTCCAACCATTCCA
GTAAATCCTTGGAGAGATAGCAATGTGCAACGGCAACGGC--TGAGTAACAGCTCTGAGAGGTTGTGACAGCAGTGACCA
GCGTTGATGGCTAACGTTCTTCTTTGGCCCTGTAATAATCCAAATGCCTGTGATCGTG---ATCTATCGAACAGCACCGT
AGTACCTTCTTCAGGAACTGCAATGGGCACTTCAAGATGGCCATAGAGCTCTCTGAACACAAGCTTTGTGGCCCTTACAT
CACCATTCTCTGCATCTCCATTCCCAGGTGCGCATTCTGCTTAGGCCCTGTAATGACCCCTTCTATTTTCTGTCTATTTT
GAATATTCAAATCTTAACAATAGACTAAATCAACCCACGTCTCGTCCTTCCTGTATTTCATTTGAGCAAATGGATTCAAG
ATAATTTTAATTGTTGTCAAGAGAACTACGACGTCCATATGTAGGAATGTGAAGAAGAATGACTGTTAGATGTCTTCTTT
GGTTTATTTCTACTTGATTAATACTCCCTCCGTCCCAAAATAAGTGTCTCAAGCTTAGTATAGCTTTGTACTAACATTAG
TACAAAGTTGAGACACTTATTTTGGGGCGGAGGGAGTATCTCATAGGGGGTCCTCTTTGATTCTTTATATAGAGGCCTGA
TAATTGAAACTAAGTAATGAATTGAAGATCATATGTGTCTAATTGTCTTAAGGCCCAAGCTAATGTGTACCGTCCTAATT
TAAAGGATCAACAACCTAACT---AACTTAAGATATGGTATCTGTGTACTCACCCATAGGTCCAGTCCATGTACTTCCAT
GCATAGCAAATTC
>chr4A_4
---ACCAAAAATCAGTTTGCTTTCATGCCTGTGAGGTCGACCATGGAAGCCATTTTCTTGGTACGACAACTTATGGAGAG
ATACAGGGAGCAAACAAAGGACCTGCATATAGTGTTCATTGACTTGGGGAAGGCCTATGAAAAGATACCACGGAATGTCA
TGTGGTGGGCCTTGGAGAAACACAAAGTCCCAGCAAAGTAGATTACCGTCATCAAGGACATGTACTATAATGTTGTGTCA
AGTGTTCGAACAAGTGATGGCGACATTGATGACTTCTTGATATGATGTACATTACCCTCATCAAGGACATGTACTATATA
AACCAAGCAACACATCATTCCATATGTACCACAATTACGCTTTGAAAACAAGCATGCATAGAATTAATCAAGTACTCCCT
CCGTCCCAAAATAAGTGTCTCAACCTTAGTA----------------------------------------------CAA
CTTCCTACTAGAGTTAGTACAAAGTCAAGACACT--------------------------------------------TA
TTTTGGGACGGAGAGAGTAATACATAAGACTGAATAGAATCAACAACCAAACCCAATCATCGATATGATGTACTCCCTCT
GTCCCAAAATAAGTGTCTCAACCTTAGTACAAGTTTGTACTAGAGTTAGTACAAACTTGAGACACTTATTTTAAAACCGA
GGGAGTAATTGCATGCAGTAACTATGTAATGATATACAGATTCAAAGACATGCTTCTTCTCCCCAGAGTTACGGCTGGG-
AGGG--------------GGGAGGGGAAGGCACCTGGCGGTGAGTGAAATGTTGCGGACCAGGAGGCCGGTGGGCGCCGA
CGGTCGGTCGTACCCGCGGCGGGGCCCGCCGCCGCCG---CCGCGGTAACGGTCACGCGGGTCGTCGTAGTGCCTGTAGC
GGGGAGGACTGCGGCTGTACCGCCTGCGTGGGCTGTAGCTGCGGCTTCG------GCTGCGGTACCCGGCCATCGACGCG
TCGCCCTCGTTTAGTTAGGGTTTCTGTGAGGTTTGGATAATAACTTTACG----AAAAGCGATAGAGAGAGAGAGAAGAT
CATGGCTTTTAACTTAAAGCACACGTGGGCCTCATGGCCCATGGGCCGTAGGGCAAATCCAAGTCAAAACCTCGCGAGCC
GCATCGCCACCAAATCTGACCA-CCCC-CGGTCCCCGTGCGGCTCACGACAGCATCACATTCTCCTCCCGTCGACGCCGC
CGCCGCCGCTCGCCACGGATCACCACCATGTCCCCGCTTCCGCGCCGCTTCGCCTCCGTCAGACACATCTGCTCCAGCTC
CGCCTCCGAGCTCGCCCCGGTACCGACCGCCGTCTCTGACGCCGCCTCCCGCGCGGCAGCCGCCGTGCTCCGCGCCCCGC
GCTTCGAGCCCCGCCTCCTGTCGCTCGTCCCATGCCAACTGCTCTTCGAGCCGAGCTGCGTCCGCCAAACCCTCTCCCGC
CTCCTCCCCTCCCCTGAACCCTCGCTCCGTTTTCTCCTCTTCCTCGCCTCCCACCTTCCC------GCCCCCGCTGACGC
CCCTG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CCCCTTCGCCTCACCTCCCCGGGATCGACGCCT
TCCTCCTCAGCCTCCAGCCACATCTCGCAGCCGATGCCGCCGCGCTGCTAGCCTCCCACCTCGGCCTCCACCCTTCCCTG
CCCGCACTCAACGCGGCATCCCGTGCCGCTCTCCGGGCCGCGCGTCCCGACCTCGTCTTCCGCCTCTTTTCCACCTTCTC
CTCCTCCCCTGCCTTCCCAGGCAACGCGGGCACCGTCGCCTGCCTCGTGCGCGCCTGTGCAGCCGACTGCCGCCCGCTCG
ACGGCCTCCGCCTCCTCCGAGATGCTGCACGACGTGGCTCCCCTCCCTCATCTGCTGCTGCCGCCGACCTTGTCACGTCC
TTTGTGGCCATCGGCAACTTCGCAAAGGTGTCTGAGACGCTCCACCTCATGATCTCTGCGGGATGTCCTCCAGCTACGTT
TGTCTACCAGCGTGTCATACATGGGCTCTTTGCGCATGGGATGGGTGGCGAGGCCCTTCGTGTCTTCAGTGAGATCAAGC
TGCGTGGTTATGCCATAGATGTAGTCACTTACAACACAGCACTCACTGGTTTATGTAAAATGGGCCACATTGCCGATGCG
CGGCAGATGTGGGATGAGATGGTGGACAAAGGTATACAGCCCAGTGAGTATGCATATTGCTCTTTTCTCGATTACTACTG
TGAAGCTGGTGATTTTGGGATGGCTCTCAAGGTGTATGAAGAAATGCTTGACAAGGGATTCAAGGAGAGCACAGTTAGCT
GTAACATTATCGCCAAAGGGTTTTGTGTTCATAGGAGGGTGGACGAAGCAGTTGGGGTGTTTGAGGGAATGGTTACAAAA
GGGATTGAACATGATGTGATCACTTATAACACGTTGATTCAGGGCCTATGCAAGGTTGGTAGGTTGGCTGAGGCGATAGG
GATGTATCAGCGGCTACTCTCATCTGGTTTGGAGCCAAGTGTGCAGACCTTCACACCACTCATTGACACCTTGTGCAAGG
AAGGGCAGGTCGATCATGCTGTTGAATTACTTACCTTGATGCAGGCTAAGGGCTTGGAACCGTTGGAACGTAGCAATGAT
AGTGTCATCAATGGGTTCTGTAAGGTCAGGCGGGCTGATGATGGTATGGCATGGTTGGCTAGCATGTTGAAGAACAATCT
GAAACCTCGGGAACAGACGTTCAATTCTTTGCTGGAGTCTCTGAGCAAATCCGAGCGAATGGATGACGCACTGCTGATTC
TGAATACAATGTTTAAAGCTGGATATGAATTAGGCAGTTTGGCTTCTGCTATACTTGTTGATAAGTTATGCACAGGCATT
GTATCTTATCCTCAAAAGTTGGAGGATATTTTGGTGAGCAGCTAGTGGCATTTGGATGCCCTGCAAATCGTACAAATGTT
CATTTGTTTCTCCCTTGATTGATGTCTTTGAGAAATGTTTTTATTGGTGTTGTTCAAAAGGCTACACAAATGACTTATGT
AGAAATTCAGAACCCTGATGACCAAGAACTTGACTTTTGAGGTTCATATTCAGATTATAACTTGGCCTCCAACCATTCCA
GTAAATC-TTGGAGAGACAGAAATGTGCAACGGCAACGGCTGTGAGTAACAGCTCTGAGAGGTTGTGACTGCAGTGAGCA
GCGTTGATGGCTAATATTCTTCTTTGGCCCTGTAATAATCCAAATGCCTGTGATCGTGGGGATCTATTGAACAGCACTGT
AGTACCTTCTTCAGGAACTGCAATGGGCACTTCAGGATGGCCATAGAGCTCTCTGAACACAAGCTTTGTGGCCCTTACAT
CACCATTCTCTGCATCTCCATTCCCAGGTGTACATTGTGCTTTGGCCCTGTAATAACCCCTTCTATTTTCTGTCTATTTT
GAATATTCACATCTTAACAATAGACTAAATCAACCCATGTCTCGTCCTTCCTGTATTTCGTTTGAGCAAATGGATTCAAG
ATAATTTTAACTGTTGTCAAGAGAACTACGACGTCCATATGTAGGAATGTGAAGAGGAATGACTGTTA-ATGTCTTCTTT
GGTTTATTTCTACTTGATTAATA---------------------------------------------------------
--------------------------------------TCTCATAGAGGGTCCTCTTTGATTCTTTATATAGAGGCCTGA
TAATTGAAACTAAGTAATGAATTGAAGATCATATGTGTCCAATTGTCTTAATTCCCAAGCTAATGTGTACCGTCCTAATT
TAAAGGATCAACTACCTAACTGGAAACTTAAGGTATGGTATCTGTGTACTCACCCATAGGTCCAGTCCAGGTACTTCCAT
GCATAGCAAATTC
>chr4B_107
--------------------------------------------------------------------------------
--------------------------ATATAGTGTTCATTGACTTGGAGAAGGCCTATGATAAGATACCACGGAATGTCA
TGTGGTGGGCCTTGGAGAAACACAAAGTCCCAGCAACGTACATTACCGTCATCAAGGACATGTACTATAATGCTGTGCCA
AGTGTTTGAACAAGTGATGGCGACATTGATGACTTCCCAATATGATGTACATTACCCTCATCAAGGACATGTACTATATA
AACCAAGCAACACATCATCCCATATGTACCACGGTCACGCTCTGAAAACAAGCATGCATAGAATTAATCAAGTATTCCCT
CCATTTCAAAATAGATGACTCAACTTTGTACTAACTTTAGTACAAAGTTGGATCATCTATTTTCAAAATAGATGACTCAA
CTTTGTACTAACTTTAGTACAAAGTTGGATCATCTATTTTGAAACAGAGGGATAAAGTTAGTACAAAGTAGGGTCATCTA
TTTTGGAACGGAGGGAGTAATACATAAGACTGACTAGAACCAACAACCAAACCAAATCATGGATATGATGTACT------
--------------------------------------------------------------------------------
---------TGCACGCAGTAATTATGTAATGATATACAGATTCAAAGACATACTTCTTCTCCCCAGAGTTACGGCTGGG-
AGGGTGGGAGGGGGAGGGGGAAGGGGAAGGCACCTGGCGGTGAGTGAAATGTTGCGGACCAGGAGGCCGGTGGGCGCCGA
CGGTCGGTCGTACCCGCGGCGGGGCCCGCCGCCGCCGCCGCCGCGGTAGCGGTCACGCGGGTCGTCGTAGTGCCTGTAGC
GGGGAGGACTGCGGCTGTACCGCCTGCGTGGGCTGTAGCTGCGGCTTCGGCTGCGGCTGCGGTACCTGGCCATGGACGCG
TCGCCCTCGTTTAGTTAGGGTTTCTGTGAGGCTTGGATAATAACTTTATTTACTAAAGGCGAGAGAGAGAGAATGGCTG-
-----------ACTTGAAGCACACGCGGGCCTCATGGCCCATGGGCCGTAGGGCCAATCCAAGTCAAAACCTCGCGAGCC
GCACCGCCATCAAATCTGACCACCCCC-CGGTCCCCGTGCGGCTCGCGACAGCATCACATTCTCCCCCCGTCGCCGCCGC
CGCCGCCGCTCGCCGCGGATCACCACCATGCCCCCGCTTCCGCGCCTCTTCGCCTCCGTCAGACACATCTGCTCCGGCTC
CGCCCCCGAGCTCGCCCCGGTACCGACCGCCGTCTCTGACGCCGCCTCCCGCGCGGCAGCCGCCGTGCTCCGCGCCCCGC
GCTTCGAGCCCCGCCTCCTGTCGCTCGTCCCACGCCAACTGCTCTTCGAGCCGAGCTGCGTCCGCCGAACCCTCTCCCGT
CTCCTCCCCTCCCCTGAGCCCTCGCTCCGTTTTCTCCTCTTCCTCGCCTCTCACTTCCCCGCCCCTGCCCCCGCTGACTC
CCCTG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CCCCTTCGCCTCACCTCCCCGGGATCGACGCCT
TCCTCCTCAGCCTCCAGCCACATCTCGCCGCCGATGCCGCCGCGCTGCTAGCCTCCCACCTCGGCCTCCACTCCTCCCTG
CCCGCACTCAACGCGGCATCCCGTGCCGCTCTCCGGGCCGCGCGCCCCGACCTCGTCTTCCGCCTCTTTTCCACCTTCTC
CTCCTCCCCTGCCTTCCCAGGCAACGCGGACACCGTCGCCTGCCTCGTGCGCGCCTGTGCAGCCGACTGCCGCCCGCTCG
ACGGCCTCCGCCTCCTTCGGGATGCTGCACGACGTGGCTCCCCTCCCTCGTCTGCTGCTGCCGCCGACCTTGTCACGTCC
TTTGTGGCCATCGGCAACTTCGCAAAGGTGTCTGAGACGCTCCACCTCATGATCTCTGCGGGATGTCCTCCAGCTACGTT
TGTCTACCGGCGTGTCATACATGGGCTCTTTGCGCATGGGATGGGCGGCGAGGCCCTTCGTGTCTTCAGCGAGATCAAGC
TGCGTGGTTATGCCATAGATGTAGTCACTTACAACACAGCGCTCACCGGTTTATGTAAAATGGGCCATATTGCCGATGCC
CAGCAGATGTGGGATGAGATGGTGGACAAAGGTATACAGCCTAGTGAGTATGCATATTGCTCTTTTCTCGATTACTACTG
TGAAGCTGGTGATTTTGGGATGGCTCTCAAGGTGTATGAAGAAATGCTTGACAAGGGATTCAAGGAGAGCACAGTTAGCT
GTAACATTATCGCCAAAGGGTTTTGTGTTCATAGGAGGGTGGACGAAGCAGTTGGGGTGTTCGAGGGAATGGTTACTAAA
GGGATTGAACATGATGTGATCACTTATAACACGTTGATTCAGGGCCTATGCAAGGTTGGTAGGTTGGCTGAGGCGATAGG
GATGTATCAGCGGTTACTCTCATCTGGTTTGGAGCCAAGTGTGCAGACCTTCACACCACTCATTGACACCTTGTGCGAGG
AAGGACAGGTTGATGATGCTGTTGAATTACTTACCTTGATGCAGGCTAAGGGCTTGGAACCGTTGGAACGTAGCAATGAT
AGTGTCATCAATAGGTTCTGTAAGGTCAGGCGGGCTGATGATGGTATGGCATGGTTGGCTAGCATGTTGAAGAACAATCT
GAAACCTCAGGAACAGACGTTCAATTCTTTGCTGGAGTCGCTGAGGAAATCCGAGCGAATGGATGACGCACTGCTGATTC
TGAATACAATGCTTAAAGCTGGATATGAATTAGGCAGTTTGGCTTCTGCTATACTTGTTGATAAGTTATGCACAGGCAAT
GTATCTTATCCTCAAAAGTTGGAGGATATTTTGTTGAGCAGCTAGTGGCATTTGGATGCCCTGCAAATCGTACAAATGTT
CATTTGTTTCTCCCTGGATTGATGTCTTTGAGAAATGTTTTTATCGGTGCTGTCCAAAAGGCTACACAAATGACTTATGT
AGAAATTCAGAATCCTGATGACCAAGAACTTGACTTTTGAGGTTCATATTCAGATTATAACTTGGCCTCCAACCATTCCA
GTAAATCCTTGGAGAGATAGCAATGTCCAATGGCAACAGCTGTGAGTAACATCTCTGAGAGGTTGTGACAGCAGTGACCA
GCGTTGATGGCTAACGTTCTTCTTTGGCCCTGTAATAATCCAAATGCCTGTGATCGTGGAGATCTGTCGAACAGCACCGT
AGTACCTTCTTCAGGAACTGCAACGGGCACTTCAAGATGGCCATAGAGCTCTCTGAACACAAGCTTTGTGGCCCTTACAT
CACCATTCTCTGCATCTTCATTCCCAGGTGTGCATTCTGCTTTGGCCCTGTAATAACCCCTTCTATTTTCTGTCTATTTT
GAATATTCAAATCTTAACAATAGACTAAATCAACCCACGTCTCGTCCTTCCTGTATTTTGTTTGAGCAAATGGATTCAAG
ATAATTTTAGTTGTTGTCAAGAGAACTACGACGTCCATATGTAGGAATGTGAAGAGGAATGACTGTTAGATGTCTTCTTT
GGTTTATTTCTACTTGATTAATA---------------------------------------------------------
--------------------------------------TCTCATAGAGGGTCCTCTTTGATTCTTCATATAGAGGCCTGA
TAATTGAAACTAAGTAATGAATTGAAGATCATATGTGTCTAATTGTCTTAAGGCCCAAGCTAATGTGTACCGTCA-----
-------------ACCTAACTGGGAACTTAAGGTATGGTATCTGTGTACTCACCCATAGGTCCAGTCCATGTACTTCCAT
GCATAGCAAATTC
>SNPs
SSS------S---------S------------------------------------------------------------
-----S--------SS---------------S------------------------------------------------
-----------------------------------------------S--S-----------------------------
----S------------S--------------------------------------S--------------------S--
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
----------------------------------S----------------------------S---------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S--------------------S-------------------------------------S-
SSSSSS-----------------------------------------------S---------------------S----
---------------------------------------------------S----------------------------
---------------------------S---------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S-----S----------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------S-----------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S---------S------S-------------------------------------------S------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-----------S-----------S-------------------------
-----------------------------------------------------------S--------------------
-------------------------------------------------------S------------------------
-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S---------------------------------
--------------------------------------------------------------------------------
------------S-------------------S-----------------------------------------------
-------------
>forward_1274
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------GCATCACATTCTCCTCCCGT------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------
>reverse_2354
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------GCACAGTGCTCACCGGTTTA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>forward_1903
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TGCTAGCCTCCCACCTCC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------
>reverse_3643
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------AGGCCCTGTAATGACCCCTT------------------
--------------------------------------------------------------------------------
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-------------
