>input_sequence_42158
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------------------------------------------TCTCGTCGTCTCCGCGCGCAAGAACCAGCCAGAGATGG
AGACGCCGCTGTCCACCAGGCGGATCACCCGCTCGCTCGCCGCCGCATCCGCCCGTGAGTCCCCCCCT-----CTTGATC
GACCGCAATTCCCTCGCTCCCTCCCAGATCGCCTATGGATCCCGTCGTGATACTTCTACTCGGAAATCCCTGTGTTGAC-
--------------------------------------------------------------------------------
----------------------------------------------------------------CGCAGTTCTTGGATTC
GATTCTCCCCCTGCAGAGAAGAGCGCCGCC---GCCGCCGCGGATGTGACCTGCAGCAGATCCAAGAAGGCCGTCCCCAA
GGGAGGGGACGGTCCGCGCGCCGCGCTGCACGACATCACCAACGACTCCCCCATCGTCGGCCTCGCCGCGGGCGGACTCG
TCCACGCCGCCGACAGGACGCCACAGGCCTCCACCGCTGGCGCCAAGAACCGCCCCAGGCCCCGCTGCACGCCCGGCTCT
GGCGAGGCGCTGCTGCGCGGCCAGGTCAAGACGCTCCTGCAGAAGGTCGACGAGGAGGGCGCTGCCGCCGCCGTCATCAG
GCCGGTCCGCATCCACGCGCTGCTCGGCGTCACCAGGTCGCCGGCGCAACTCCTCGCCCCCACGCCGTTCAACACGCCCC
AGCTCTGGGCCGAGTCCGCCGGTCGTGGGGAGTCCGCGCAGCCTGATGGCCGGACCGTGCTGCCCTGCGTCCTGGAGCAG
GAAGAACTGATTCCTAAGCTGCAGGTACCGATCTCCGTCTTAACTCCGTGAACAACTCAAAGATCGATTTTGTCAATTTC
TGATTTGCCTCGTATGTTTAGTTATTATCTCCGTGCAACAACTCAAAGATCAAACCTTGCATTGTACTTATTGATCATCA
TTTGTTGAGCTGCGCATGATATAGCAATTCTGTAAAATTAACCAATTT-------------------TTTGCACAGCCTG
ATCCCTTGTGTTT-----------TATTTCTGAGTAGCATAGCCTGCTGTGAAAGATGCCC--AACGATAGGCAGACCAA
AGATGTTTATTGTGTCCTACGGTACTTAATAAATTTTGATGCAGACTCTTGCTGCGTTAGTAATCTGCACAATTTGCAGC
ATCTGGCCTGCTGTGAATGTCGATGCCTCTAATTT---------------------------------------------
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------------------------CTGCCGTCGGCTCT-TTGTTACACCTGGGCTTGAGCTGCGTTGCTACTGCTGTTGT
CGTTTCAGGCCATTGCTGATCCCCCGCCCAACCGTGCGCTGGTGTTCGACGACTCCCCAGGGAAATCGGACCAGTCCACC
GATGGATCGTCCCTGACATTCCACGTGAGCAGCAGCGACAGATCAGCTGACGACGACAGCTCGTCGGTTTGGTCTATCCA
GGTCAATGTCAGCTCCGAGGAGAA------GGAAGAGGAGGATATCGGTGTTGACACCGTGGGAGAGCCTGAAGAAGAGT
ACAATACCGAGGAAGAGCCGGAAGGAGAGTACTACACCGAGGAGGAGGACTGGGAAGACGATGATGATGATAGCGAGTGC
TTTGATGATCTGTGCGAGGGGATGAGCAAGATGTCGGTGTTCGAGGCGGAGGAGAAGAAGAAGGTCGGGCTGCCGGCGTT
CGAGGGCAGGCACACTCGGTTCGTCTACAACAGCGACGACGAGATCGTGGAGAGGAAGGAGGTGGAGAACGCGGCGGCAG
AGCACGGCGCGCTGCTGAGGGGCCTGCCGGTGCCGGAGGGGAAGCATCTCCGGTTCCACGACGACGATGACGAGGAGGAG
TAAGCAGGCCTGCATGAGTTGATGGGGATGGGTTTGGGGTGTTTACGTTGATGGGATACAGTAGTGTGGTTGTCGCTCCC
TGACACCAACCAAGCAACACATTCTTTTGGTTTGGACAT-------GCTATCTTTTATGCTTTCTTTTTTAGGCTTTGAT
TCGTTATTG-----------------------------------------------------------------------
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----------------
>chr1B_1_TraesCS1B01G210600
AAGATGCGTGCGAAAAACTAGATATGAAAAAAAAGAACTATTTTGCTCGCGTAAATACACCTTAAGATGTCTCGTCGTAA
AGAACAAGTTTGTTGTTGGAGTCATCTTGGTCCAAGGTCGTATGCGATCTCTA-------------GGACCAACACAAGC
GAGTTATCTGGTACATTTGGCAACCTGGAGCCTCCGGACCTATGCTCCCGAGTTACAGTAAATTTGATGTTTTGGACGGT
ATTTCAAGTCTTTTTATTGTAAGGAAAGTTCATTCATCTCAT--------------------------------------
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--------------------------------------------------------------------ATATAGATGAGA
GGTGATGGCCTATTAAACAACACACAATCACTCAATAGATTTGCCACTTTTTACTTTT-----TTCTTCTTTACCCTAG-
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TGTTCTT
CTTTCTCGTTTTTCATGTTCGATGGCAGCGAACTCGAGGCCATAGGGATGACAAG--TCGACTTAGGGTAGCCAATAGCC
ACCGCATGTCCTGACGGGTCTTTCTCGGACTTGTGAGGT-TTGGGGTCCTCAAATGACCTCACCGGTGTGCCTTGCGCAT
TGCGCTCCCGACGAGGCTCCTCTGGTCACCTATCTTGCGTATCACGCTCGATGTTGCGGGTACACGGCGAATGTCG----
--------------------------------------------------------------------------------
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---GTGCAAACAACCTCGGATGCACCCATACTATTCTCAAGAGCGAGAGTGAGATATGTGGGACCATATGTCCAAAGTGG
CCCTACCAAA-CGAACAT-GCACCTCCGTCCGTAGACGACGAAACGTACTCGGTCCCATAAGCGAGCTGGGCCTGTAGTA
G---GTTACAGGCCCACGTAGCGCGCGTGCGACTTCCTCAACGGCAAAACCAACGG----------CTCGTTCTCTCCAG
ACGCGTGAGACAACGGTCATATTACCGTTGTACTCTCCC------CCAACCCCGACTCCGAGCGTCGTTCAAATCCTTTA
AAGCCGCCTCCCATCTCTCTCCTCCCCCACCCCCGATTGCTGCCA------CCGCCGCCGCCGCCTTCCC--CTCTCCTC
GCGTCTCTCCGCCTCAGCGACGTGAAGC-----GCGTCCCCATCTCGTCGTCTCCGCGCGCAAGAACCAGCCAGAGATGG
AGACGCCGCTGTCCACCAGGCGGATCACCCGCTCGCTCGCCGCCGCATCCGCCCGTGAGTCCCCCCCT-----CTTGATC
GACCGCAATTCCCTCGCTCCCTCCCAGATCGCCTATGGATCCCGTCGTGATACTTCTACTCGGAAATCCCTGTGTTGAC-
--------------------------------------------------------------------------------
----------------------------------------------------------------CGCAGTTCTTGGATTC
GATTCTCCCCCTGCAGAGAAGAGCGCCGCC---GCCGCCGCGGATGTGACCTGCAGCAGATCCAAGAAGGCCGTCCCCAA
GGGAGGGGACGGTCCGCGCGCCGCGCTGCACGACATCACCAACGACTCCCCCATCGTCGGCCTCGCCGCGGGCGGACTCG
TCCACGCCGCCGACAGGACGCCACAGGCCTCCACCGCTGGCGCCAAGAACCGCCCCAGGCCCCGCTGCACGCCCGGCTCT
GGCGAGGCGCTGCTGCGCGGCCAGGTCAAGACGCTCCTGCAGAAGGTCGACGAGGAGGGCGCTGCCGCCGCCGTCATCAG
GCCGGTCCGCATCCACGCGCTGCTCGGCGTCACCAGGTCGCCGGCGCAACTCCTCGCCCCCACGCCGTTCAACACGCCCC
AGCTCTGGGCCGAGTCCGCCGGTCGTGGGGAGTCCGCGCAGCCTGATGGCCGGACCGTGCTGCCCTGCGTCCTGGAGCAG
GAAGAACTGATTCCTAAGCTGCAGGTACCGATCTCCGTCTTAACTCCGTGAACAACTCAAAGATCGATTTTGTCAATTTC
TGATTTGCCTCGTATGTTTAGTTATTATCTCCGTGCAACAACTCAAAGATCAAACCTTGCATTGTACTTATTGATCATCA
TTTGTTGAGCTGCGCATGATATAGCAATTCTGTAAAATTAACCAATTT-------------------TTTGCACAGCCTG
ATCCCTTGTGTTT-----------TATTTCTGAGTAGCATAGCCTGCTGTGAAAGATGCCC--AACGATAGGCAGACCAA
AGATGTTTATTGTGTCCTACGGTACTTAATAAATTTTGATGCAGACTCTTGCTGCGTTAGTAATCTGCACAATTTGCAGC
ATCTGGCCTGCTGTGAATGTCGATGCCTCTAATTT---------------------------------------------
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------------------------CTGCCGTCGGCTCT-TTGTTACACCTGGGCTTGAGCTGCGTTGCTACTGCTGTTGT
CGTTTCAGGCCATTGCTGATCCCCCGCCCAACCGTGCGCTGGTGTTCGACGACTCCCCAGGGAAATCGGACCAGTCCACC
GATGGATCGTCCCTGACATTCCACGTGAGCAGCAGCGACAGATCAGCTGACGACGACAGCTCGTCGGTTTGGTCTATCCA
GGTCAATGTCAGCTCCGAGGAGAA------GGAAGAGGAGGATATCGGTGTTGACACCGTGGGAGAGCCTGAAGAAGAGT
ACAATACCGAGGAAGAGCCGGAAGGAGAGTACTACACCGAGGAGGAGGACTGGGAAGACGATGATGATGATAGCGAGTGC
TTTGATGATCTGTGCGAGGGGATGAGCAAGATGTCGGTGTTCGAGGCGGAGGAGAAGAAGAAGGTCGGGCTGCCGGCGTT
CGAGGGCAGGCACACTCGGTTCGTCTACAACAGCGACGACGAGATCGTGGAGAGGAAGGAGGTGGAGAACGCGGCGGCAG
AGCACGGCGCGCTGCTGAGGGGCCTGCCGGTGCCGGAGGGGAAGCATCTCCGGTTCCACGACGACGATGACGAGGAGGAG
TAAGCAGGCCTGCATGAGTTGATGGGGATGGGTTTGGGGTGTTTACGTTGATGGGATACAGTAGTGTGGTTGTCGCTCCC
TGACACCAACCAAGCAACACATTCTTTTGGTTTGGACAT-------GCTATCTTTTATGCTTTCTTTTTTAGGCTTTGAT
TCGTTATTGCTGGTTCCAGTTCTTCTGAGGA----------CATGGTGGTACATTGATGTTATTGCTGGTTCAGTTAGTG
CAACATATCTCAAAGTTGTACTAAATAACTCAATGCTCTCATTGT----------------------------AGTTCAT
GCTCATTCTGTG---TATTCAGTTTTCAGTTCATGCTCATTCTGTGTATTCAGTTTTCAGTTCTTGCTCATTCTCTGTAT
TCAGTTTTCAGTTTATTCTTTTGATAAATCAGCTAAGATCCAATACATACAGGCATGCGTCAATTCTGTTGGTA---CTT
TGGGGCATTTGCTATCTCTCAAATTCT---ATTGAGGACACTGAAAATGCAACATGACGTTTGTTTATGCTCATTCGGGG
CTTTTCTGGTTACT--------GTTTGGA-AAATGGACTGCCTAGATCCCAATGG-ACACCATATATGTGAAAATTATCG
AATACAAAATGAGGACATGACAAATACAAGAAGCACAGT-----------------------------------------
-CCAAGTAAAAAAAAATATAAGAGCACCCACAATTTATTGGT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------AAAGATCCCTAGAAGTAACAAAAATTACAATCGAGTTTGTGG
ACTACACAGAGCAT------TGGAGCGAGTCGAAGGCGGGTCGTCATCATCCTCCCTCAATGATTGTGTCCAACTTT---
--------------------------------------------CCCATGTCATTCATTCAAATCAA-------------
-----CTAA--ATCAAATTTTACTTGTCTTCCCCAAA-------------------------------------------
-------------------------------------------------TATTGAACCACTAGAATATGTATGTCTCGTT
GCAAGGCATGGACAATTAGCTAGTCGTTGACACCCAGGAAGTCGACGTGCTTAGACCCCAAAGAACCAATTCTCCACAAC
AAC-AAATATCGTTGATGAAGAAAAACAGAGATCAAAATGACCATACCTACAAACACACACCAGGAGCCCTAGCCAAATC
CATATGGATACGATGTA---------------GACCCAAGCAAATCCGCTAGAAAAACACCAACATGCACCCTCCCGCTC
GCG-----------ACCGGAGCACAAAATGGCGCGAAGGACATCATTCTTACTCTAGGATGCCGCCACCTTGCCACCCCG
ACCATGACACAAAAAC
>chr1A_12
-----------GAAAAACTAGATATGCAAAAAAA---CTATTTTGCTCGCGCAAATACACCTTAAGATGTCTTGTCGAGA
AGAGCAAGTTTGTTGTTGGAGTCATCTTGGTCCAAGGTCGAATGCGATCTCCATGACCAGCA-------------CAAGG
GAGCTATCTGGTACATTTGGCAACCTGGATCCTCCGAACCTATGCGTCCGAGTTAGGGTGAATTTGATATTTTGGACGGT
AATTCAAATCTTTTTATTGTAAGGAAAGTTCATTCATCTCATCCTTTATAACACTAAACTCCATAGTTTTAAAGAGCCCA
CATTCAATTAAGGTCTCTAATTAAGATTGGGTCATCCAATTTTGATCGGCTAAACAATTTCTCAAAACTATCTCATTCAA
TACTTCCATACTATATACTATGCTTCCTGATTTGTAAGGCCTCGCAATTAATTGAAATCTTCAATTTAGAACTGGGTCGA
CACGATTTTGACCGGGTCAATAATTTCTCAAGGGCTCACCCATTCAATTCTTTTAGTTTAGTATGTTCCCATTTTGAAGC
TCTTTCATTCAATTAAGGTATTCAATTTTGGATTTGGTTTACGACTTTAATCAAACCATCGATTTTTCAAATCAATCAGC
AGCAAGCGGCTTATAAAAACGTATCACTCCCGTGCATCCTTCCATCACCTAGACAAAAAGGAGCGTCACCATGTGATATT
GTAGCACCAATATAGTAAATGCAGCCACGACACAAAAATTTCTCACATAAATATACGTTGGTTAGCAGATGACACAGTAC
CACACCAGAAAGGCCTATCAAATCACCACATTATAAATAAAAATAAAACACATTCCATAATCTCCCCCACCCGCCAAACG
AAATATTTCAGCAGTTCCAAAATATATGGGGTATTAGTTTTTCGGAAAATCAAATTTCTTTAACGTTGACCGAGTTCAGA
GTAGAAAATATTGACATCTGCAATATTAAAGAAAAAGGTATGGAAATTCATCTCATGATGAATTACCGATTTGATATTAT
AAATCTTGATATATTTCTCTACAAGTTTGATGAAACTTAAAAGGTTTGACTTTCATAAAAGTTATACACTTATATTTTAA
AATACAGTGAGTAATTTTTTTAAGAAATCCAAAAGCCCAACGACGCAGCAAAGCGCATCCAACCCAGTATATAGACGAGA
GACGATGGCCTATTGAACAACACACAATCAATCAATAGATCTACCACTTTTTACTTTTGGGTTTTTATCATTTATGCCTT
GTGTCCCACTATTCAGTTTTGCCATTAGAAGTTACAACTGCTCAAAAATACCATCAATCTGTGAGATGCTTGCTCAAAAA
TGCCATTAGATATCTAAAAAATGCCATCGTTCTGTTAGATGTTTGCTCAAAAATGCCATTAGACATTGTTATTTTTACAT
CAAACCCGTTGACCATGTTCTATGACAAAAATAAGCCTAGACCCACATGTCAGTTCTCTCTATCTCACAATGATATGTGT
GGCCCCACTTGTCAGGAGTAACCAAACAAATAATTTTACAGGAAAATAAGAACGCTGTTGGGATCAAGTGGGCCCCGTAC
TTTATTGTAGTGAGATAAAGGGAGAGCTGGCATGTTGATTCATAGGTATTTATGTCATTATAACATGGTAAAAAAGATTT
GAGATCACAATAATGGTGTTTAGTGGCATTTTTGAGCATGTGTCTAATGAAGCGATGGCATTTTTGAGCAGTTGAAATTT
CTAATGGCAAAACTGAGCAGTGAAACACAACCGGTGGCATAACTGATAAAAACCCTACTTTTGCTTTTTGTTGACATGTC
CGTGTGCAAACAAACAAGCCTCAGAAAC----------------------------------------------------
------CGTACCGAACAA-GCACATCCGTCCGTAGACGAAAC--CGTACTCGCTCCCACAAGCGAGCTGGGCCTGTAGTA
G---GTTACAGGCCCACGTAGCGCGCGTGCGACTTCCTCAACGGCAAAACCAACGGCTACTATAGTCTCGTTCTCTCCGG
ACGCGTGAGACAACGGTCATATTACCGTTGTACTCTCCTCCTAGTCCAACCCCGACTCCCAGCGTCGTTCAAATCCTTTA
AAGCCGCCTCCCATCTCTCTCCTCCCCCACCCCCGATTGCTGCCGCCGCCGC------------CTTCCCTCCTCTCCTC
GCGTCTCTCAGCCTCAGCGACGTGCGTGAAGCAGCGCCCCCGTCTCGTCGTCTCCGCGCGCAAGAACCACCCAGCGATGG
AGACGCCGCTGTCCACCAGGCGGATCACCCGCTCGCTCGCCGCCGCATCCGCCCGTGAGTTTCCCCTCCCCTCCTCGATC
GACCGCAATTCCCTTGCTCCCTCCAAGATCGCTTATGGATTCCGTCGTGATAATTCTACTCGGAAATCCGTTTGCTGAC-
--------------------------------------------------------------------------------
----------------------------------------------------------------CGCAGTTCTTGGATTC
GATTCTTCCCCTGCAGAGAAGAGCGCCGCCGCCGCCGCCGCGGATGTGACCTGCAGCAGATCCAAGAAGGCCGCCGCCAA
GGGAGGAGACGCTCCGCGCCCCGCGCTGCACGACATCACCAACGACTCCCCCATCGTTGGCCTCGCCGCCGGCGGCCTCG
TCCACGCCGCCGACAGGACACCACAGGCCTCCACCGCTGGCGCCAAGAACCGCCCCAGGCCCCGCTGCACGCCCGGCTCT
GGCGAGGCGCTGCTGCGCGGCCAGGTCAAGACGCTCCTGCAGAAGGTCGACGAGGAGGGCGCTGCCGCCGCCGTCATCAG
GCCGGTCCGCATCCACGCGCTGCTCGGCGTCACCAGATCGCCGGCACAGCTCCTCGCGCCCACGCCGTTCAACACGCCGC
AGCTCTGGGCCGAGTCCGCCGCCCGTGGGGAGTCCGCGCTGCCTGATGGCCGGACCGTGCTGCCCTGCGTCCTGGAGCAG
GAGGAACTGATTCCTAAGCTGCAGGTACCGATCTCCGTCCTAACTCCGTGAACAACTCAAAGATCGATTTTGTCAATTTC
TGTTTTGCTTCTTA---------------------------CTCAAAGATCAAACCTTGCATTG----TATTGATCATCA
CTTGTTGAGCTGCGCATGATATAGCAATTCTGTAAAATTAACCCACCATGTGTTTGCATCATAGTGGTTTGCATAGCCCG
ACCCCTTGTGTTT-----------TATTTCTGAGTAGCATAGCCTGGTACATGATA--CCC--AACGATAGGCAGACCAA
AGATGTTTATTGTGTCCTACAGCACTTCATAAATTTTTATGCAGACCCTTGCTGCGCTAGTAATCTGCACAATTTGCAGC
ATCTGGCCTGCTATGAATGTCGATGCCTATTCTTT---------------------------------------------
--------------------------------------------------------------------------------
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------------------------GTGCCGTCAGCTTTATTGTTGCATCTGGGCCTGAGCTTCGTTGCCACTCCTGTTTT
TGTG-CAGGCCATTGCTGATCCCCCGCCCAACCGTGCGCTGGTGTTCGACGACTCCCCAGGGAAATCGGACCAGTCCACC
GATGGATCATCCCTGACATTCCACGTGAGCAGCAGCGACAGATCAGCTGACGACGACAGCTCGTCGGTTTGGTCCATCCA
GGTCAATGTCAGCTCCGAGGAGAA------GGAGGAG------ATGGGTGTTGACACCATGGGAGAGCTGGAAGAAGAGT
ACAATACCGAGGAGGAGCCGGAAGGAGAGTACTACACCGAGGAGGGGGACTGGGAAGACGGTGATGATGATAGCGAGTGC
TTTGATGATCTGTGCGAGGGGATGAGCAAGATGTCGGTGTTGGAGGCGGAGGAGAAGAAGAAGGTTGGGCTGCCGGCGTT
CGAGGGCAGGCACACCCGGTTCGTCTACAACAGCGACGACGAGATCGTGGAGAGGAAGGAGGTGGAGAACGCGGCAGCGG
AGCACGGCGCACTGCTGAGGGGCCTGCCGGTGCCGGAGGGGAAGCATCTCCGGTTCCACGACGATGATGACGAGGAGGAG
TAAGCAGGCCTGCATGAGTTGATGGTGATGGGTATGG---GTTTACGTTGATGGGATACAGTAGTGCGGTTGTCGCTCCC
TGACACCAACCAAGCAACACATTCTTTTGGTTTGGACTTTGGACAGGCTATCTTTTATGCTTTTTTT----GGATTTGAT
TTGTTATTGCTGGTTCCAGTTATTCTGAGGG----------CATC----------GATGTTATTGCTGGTTCAGTTAGTG
CAACATATCTCAA-GTTGTACTGAATAATTCAATGCTCTCATTGT----------------------------AGTTCAT
GCTCATTCTGTGTGATATTCAGTTTTCAGTTCATGCTCATTCTGTGTATTCAGTT-------------------------
------TTCACTTTATTCTTTTGATAAATCAGCTAAGATCCAATACATACAGGCATGCTTCAGTTCTGTTGGTAATTCTT
TGGGGCATTTGCCATCTCAAATTCTCAATCATT---GACACTGAATATGCAACATGACGTT--------CTCATTTCGAG
CTTTTCAGGTTACTGTTCGATCCCAATCTCAAATGGACTGCCTCGATCCCAATCGCACACACCATATGTGAAAATTACCG
ATTACAAATTGTGGACATGAAAAATACAAGAAGCAAGTGAAGTCCGAGTAGAAAACTTTCAC-----------------C
ATCGAGGACATAAAAATAATAGTTC--------------------------------------GAGAATATCCAGAAAAT
TATGGACCACGAGTTATTTTAGAGATAACCAAAAGGAACTGCCATTTTTCCAGGAGCACCCACAATTTATTGGTATCACG
TTTTCTTTTGTGAAAATAGTCCCCGATCTAAAGTGCA-AAAGATCCCTAAAAGTAACAAAAATCATGGTCGAGTTTATGG
ACTACACAGAGACAACTCACTGGAGCGAGTCAAAGGCGCGTCGTCATCATCGTCCCTCCCTCACTAGAGTCCGGCAAACC
ATTAAAAACAGAGTGTGATTGTACGCATGTCCAACTCCTCCTCCCCCATGTCATGCATTCAAATCAAGTCTTACCAAAAC
CTTAACTAAAAATCAAATCAAACCTTAC-----CAAATCAAATCAAAACTTTCCTTATCTTTCCAACTCATATTCAAATA
AAATCTTACAAAATCTAGAATATGATGGGTTTATGTTAAACACGATTGGTATTGAACCACTAGAATATG-----------
------------------------------------GGAAGTAGTCATGCTTAGACGCTAAAGGACCAACGCACCAGAGC
AACAAAATATCATTGATGAAGAGAAACACAGATTAAAATGAC--TACCTACAAACACACACTACGAGCCTTGGCTGAATC
CATACGAATTCATTGTAGACCAACACTAATCGGACCCAAGCAAATCCGCTAGAAAAACACCTGCATGCACCCTCTGCCGA
CTCTAGGGCGCATCACCGGAGCACGAAATGGCACGAAGGACATCATTC--------------------------------
----------------
>chr1D_68
-------------------------------------------------------------------TGTCTCGTCGAGA
AGGACAAGTTTGTTGTTGGAGTCATTTTGGTCCAAGATCGTACGAGATCTCCATGGCCGGCGCAAGGGACCGACGCAAGG
GAGCTATCTGGTACATTTGGCAACCGGAATCCTTCAGACCTATGCGTCCGTGTTAGGGTATATTTGATGTTTTGGATAGT
AATCCACGTATTTTTATTATACGGAAAGTTCATCTGTCTC----------------------------------------
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------------------------------------------------------------------GTATATAGATGAGA
AGCGATGACCTATTAAACAACACACAATGAATCAATAGATCTATCACATTTTACCTTTATTTTTTCTTCTTTACCCTAT-
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TTTTTTT
CTCG-----TTTCCGTGTTCGACAGCAGCGAACCTCGAGGTCCTAGAGGCGATCAGATCGACCTAGAGCAACTCATAGCC
GCCACGTGTCCTGACAAGGTCCTTTCCAGATGTGTGGGGCTTCGGGTCCTCAAATGACCTCACCGGCGTGTCTTGCGCAT
CGCACTCCCAACAAGGCTCATTTGGTGACGTGTCTTGCGTATCGCGCTCGATGTCGGGGTATACACAA------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TGACATGTC
TGTGTGCAAACAGCCTTGGATGCACCG--ACTACACTCAAGAGC--GAGTAAGATATGTGGGACCATATGTCCAGCGTGG
CCCGTACGTACCGAACAAGGCACATCCGTCCGTAGACGG---AACGTACTCGCTCCCACAAGCGAGCTGGGCCTGTAGTA
GTAGGTTACAGGCCCACGTAGCGCGCGTGCGACTTCCTCAACGGCAAAACCAACGG----------CTCGTTCTCTCCGG
ACGCGTGAGACAACGGTCATATTACCGTTGTACTCTCCTCCAAGTCCAACCCCGACTCCGAGCGTCGTTCAAATCCTTTA
AAGCCGCCTCCCATCTCTCTCCTCCCCCACCCTCGATTGCTGCCATCGCCGCCGCCGCCGCCGCCTTCCCTCCTCTCCTC
GCGTCTCTCAGCCTCAGCGACGTGAAGC-----GCGCCCCCATCTCGTCGTCTCCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTGCTGATCGCAGTTCTTGGATTC
GATTCTCCCCCTGCAGAGAAGAGT---------GCCGCCGCGGATGTGACCTGCAGCAGATCCAAGAAGGCCGCCGCCAA
GGGAGGAGACGCTCCGCGCGCCGCGCTGCACGACATCACCAACGACTCCCCCATCGTCGGCCTCGCCGCTGGCGGCCTCG
TCCACGCCGCCGACAGGACCCCACAGGCCGCCACCGCTGGCGCCAAGAACCGCCCCAGGCCCCGCTGCACGCCCGGCTCT
GGCGAGGCGCTGCTGCGCGGCCAGGTCAAGACGCTCCTGCAGAAGGTCGACGAGGAGGGCGCTGCCGCCGCCGCTATCAG
GCCGGTCCGCATCCACGCGCTGCTCGGCGTCACCAGGTCGCCGGCGCAGCTCCTCGCCCCCACCCCGTTCAACACGCCGC
AGCTCTGGGCCGATTCCGCCGCCCGTGGGGAGT---------------------CCGTGCTGCCCTGCGTCCTCGAGCAG
GAGGAACTGATTCCTAAGCTGCAGGTACCGATCTCCGTCTTAACTCCGTGAACAACTCAAAGATCGATTTTGTCAATTTC
TGTTTTGCTTCTTATGTTTAG---TTATCTCCGTGCAACAACTCAAAGATCAAACCTTGCATTG----TATTGATCATCA
CTTGTTGAGCTGCGCATGATATATCAATTCTGTAAAATTAACCATGT-------------------GTTTGCATAGCCTG
ATCCCTTGTGTTTTACAGTAGTACTATTTGTGAGTAGCATAGCCTGGTACATGATA--CCCTTAACGATAGGCAGACCAA
AGATGTTTATTGTGTCCTACACTACTTGATAAATTTTGATGAGACCTTTTACGGTACATCAAAATATTTTAAGCCATTTA
TTTTTGTGGTTCAACGGTCCAGATATAGCAATACTACGCCATAATTCAGGTAGTATATTCAGATGCCAGGGGCACTTTTG
GCAGTTCATTAGTGTAGATCCCACAGCTGCTTCTGCTGGATGTCCACACCCCGAGGGGCGGCTAGAGGAAGGCTGCCGGT
GCTGCCATTCGTGCCGTTGGCAGGGTGGTGTGGGGCCGCAGCAGGCTGGGGATGACACGGTGGGTGGGCTGCGGTGGGCA
CGGGTCTGGACGGGAGGGAGTAGGAGAACACGTTGCTCTCCTTCGGTCGCGCTGCCGAGCTGGTCGCCATTGCAGAGGGG
GAGAACATGGTGCTAGTTAGTGCCGCTTCCATTTCTCATAATTAGTTCACAGTTGTGAAGGTGCTAGCTTGCTTAAGGTT
GGATTTAGAATTGACGCCCAGGCATCACGAGCTAAATTGGTACGCAGTGTTGTTGTGTGAGTAGTGTTCGTAATGCTACA
GTTTTACATGGCAAGCTCCAGTCCCGAATTCCAAGTATCTAATTTGTTGGTGTTGATGGAGACGGGGAGCAGCGGCTGGT
GTCGCCGTCCGCTTCGTCTACCTTCGGCGGCGGCACAACAGGATGAACGGGCCTGCCTGTGCTTGTCACGTGCCGCAGCC
TAACTTGGGACTGTCACGGAGGCCGGAGAAGAGAGCGTACAGCGGCAACCGATTAATTCTGTTTCCCTGCTCGATTGATC
GATCGGAGGCCCTAAACAGATCACGTGCCGTCAGCTTTATTGTTGCATCTGGGCTTGAGCTGTGTTGCCACTGCTGTTTT
TGTG-CAGGCAATTGCTGATCCCCCGCCCAACCGCGCGCTGGTGTTCGACGACTCCCCAGGGAAATCGGACCAGTCCACG
GATGGATCATCCCTGGCATTCCACGTGAGCAGCAGCGACAGATCAGCTGACGACGACAGCTCGTCGGTTTGGTCCATCCA
GGTCAATGTCAGCTCTGAGGAGAAGGAAGAGGAGGAG------ATCGGTGTTGACACCGTGGGAGAGCTGGAAGAAGAGT
ACAATACCGAGGAGGAGCCGGAAGGAGAGTACTACACCGAGGATGAGGACTGGGAAGACGACGATGATGATAGCGAGTGC
TTTGATGATCTGTGCGAGGGGATGAGCAAGATGTCGGTGTTCGAGGAGGAGGAGAAGAAGAAGGTTGGGCTGCCGCCATT
CGAGGGCAGGCACACCCGGTTCGTCTACAACAGCGACGACGAGATCGTGGAGAGGAAGGAGGTGGAGAACGCGGCGGCGG
AGCACGGCGCGCTGCTGAGGGGCCTGCCGGTGCCGGAGGGGAAGCATCTCCGGTTCCACGACGATGATGACGAGGAGGAG
TAAGCAGGCCTGCATGAGTTGATGGGGATGGGTTTGGGGTGTTTACGTTGATGGGATACAGTAGTGTGGTTGTCGCTCCC
TGACAC--------CAACACATTTTTTTGGTTTGGACAT-------GCTATCTTTTATGCTTTTTT-----GGCTTTGAT
TTGTTATTGCTGGTTCCAGTTATTCTGAGGACATGGTGGTACATC----------GATGTTATTGCTGGTTCAGTTAGTG
CAACATATCTCAA-GTTGTACTGAATAATTCAATGCTCTCATTGTTCATGCTCATTCTGTGTATTCAGTTTTCAGTTCAT
GCTCATTCTGTGTGATATTCAGTTTTCAGTTCATGCTCA------GTATCCAGTT-------------------------
------TTCAGTTTATTCTTTTGATAGATCAGCTAAGATCCAATACATACAGGCATGCGCCAATTCTGTTGGTAATTCTT
TGGGGCATTTGCCATCTCAAATTCTCAATCATTGAGGACACTGAAAATGCAACATGACGTTTGTTCATGCTCATTTTGAG
CTTTTCCGGTTACTGTTCTCAAGTTTGGA-AAATGGACTGCCTCGATCCCAATGGCATGTGT------------------
-ATACAAATTGTGGACATGAAAAATACAAGAAGCAAGTGAAGTCCGAGTAAAAAACTTTCACTACAAGAAGAAAAACTTC
ACCGAGGACATAAAAATATACCTCCAAGCACAATAGTTCGAGAATAACCCTATCAAAAATATTGAGAATATCCAGAAAAT
TATGGACCACGCTTTATTTTTA----------------------------------------------------------
----------TGAAAATAGTCCCCGATCAATAAAGCACAAAGATCCCTAGAAGTATCAAAAATCACGGTCGAGTTTGTGG
AGACAAGCACTC----------GAGCGAGCCGAGGGCGCGTCGTCATCATCGTCCCTCCCTCATCTGTGATTGTAC----
--------------------GTTCGCATGTCCAACTCCTTCTCCCCCATGTCATGCATTCAAATCAAGTCTTACCAAAAC
CTTAACTAA--ATCAAATCAAACATTACCAAATCAAATCAAATCAAAACTTTCCTTATCTTTCCAACTCATACTCAAATA
AAATCTTACAAAATCTATAATATGATGGGTGTAAGATTTACACAATTGGTATTGAACCACTAGAATGTGTATGCCCCGTT
GCAACGCACGGACAATTAGCTAGTCGTTGACACTCGAGAAGTAGTCGTGCTTAGACCCTAAAGGGCCAATGCACAAGAGC
AACAAAATATCGTTGATGAAGAAAAACACAGATCAAAATGATCATACAGATTCG--------------------------
------------TTGTAGACCAACACTAACCGGACCCAAGCAAATCCGCTAGAAAAATACCCGCATGCACCCTCTGCCGA
TGCTAGGGCACATCACCGGAGCACAAAATGGCGCGAAGGACATCATTCTTACTCGAGGAGGCCGCCACCTTGCCACCCCG
ACCATGACAC------
>SNPs
SSSSSSSSSSS---------------S-------SSS--------------S-------------------------SS-
---------------------------------------------------S-------------------S--S----S
---S-------------------------S---------------SS--------SS-----------------------
-S------------------------------------------------------------------------------
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--S---------------------------S---------S-S-----------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
--SS-S------S--------------------SSSSS-SSSSSS-SSSSSSSSS-----------S-S-S-SS------
S--S-S----------S--SSS-S--SS-S-SS-SS--S---S-----------------------S---S---------
---S--------S------S-S-------S--------------------------S--S--SSSS-SS--SSSS-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S---------SSS----SS---------SS----S-----------------------SS----
---SSS-SS--------S-----S---------------SSS----------S-----S---------------------
------------------------------------------------------------------------------S-
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
---------S--------------------------S--------------------------------S----S-----
------------------------------------------------------------SS----SS-------S----
--------------S---------S-------S-------S-----------S----------------S-S--S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S-S----
------S----S---------------------------------------------------------S-----S----
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-----------------------------S-
---------------------SS----------------S----------------------------------------
--S-----------------------------------------------------------------------------
--S-----S--S---------SSS----------------------------------------SSSS------------
S--------------------------------------------S-S-------------------------S------
----------------------------------------------S-SSSSS-S-SS----------------------
--------------------S------S----------------------------S-----------------------
------------S------------------S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------S---S-------S--S--------------------S---------S-
S--SS---------------------------------------------------------------------------
--------S-----------------------------------------------------------------S-----
---------------------------------S---SSSSSS-------------------------SS----------
-------------S------------------------------------------------------------------
-----------------------------------------------------------------S--------------
---------------S--------------------------------------------------------------S-
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S---SSSS---------
-S-------------------S----------------------SSSSSSSSSSS-------------------------
-------------S--------S-----S---------------------------------------------------
-------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS--------------------------------------------------------------------------
------------S-----SS-SSS--S--------------------------------------S---------SS-S-
------S------------------------------------S----------------SSS--------------S--
--------S--S--------S--------------SSSS-----------------------------------------
---S--S-S-S-----------SS--SS------SSS-S-SS--------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S--SS------------
------------SS------------------------S------------S------SS-S---SSSSS-SSSSSS---
------------------------------------------------------S-------------------------
------------------SSS--S-SS-SSSSS-----------------------------------------------
-------------------------------------------------------------------------S-S----
----S---S------------------------S-S------S-S-------------S----S------S-S---S-S-
----------------------------S--------------------------------S-S-----S-S--SS----
----S-S--S-SS------------------------------------------------SS-----------SSS-SS
SSS---------------------------------------------------S----S--------------------
----------SSSSSS
>forward_1493
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TCGAGGCCATAGGGATGACA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------
>reverse_4319
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------GT
CGTTTCAGGCCATTGCTG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------
>forward_1547
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------GTCCTGACGGGTCTTTCTCG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4409
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------GTCCCTGACATTCCACGTGA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------CTGCGTTGCTACTGCTGTTG-
--------------------------------------------------------------------------------
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>reverse_6302
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------CAGGAGCCCTAGCCAAATC
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
