>input_sequence_42140
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-------------------------------------------------------------------------ATGCTGG
CAGCAGCGGCGGCGGCGGTGGCGGCATTACCGGGCTCGCGAGCGTGGTGCGGGATGGCGGGCCGGGAGCAGGATGGTGGA
TGCGGGGAGGCGGCGGGAGGC---TCGGTGCTGTCCGGGGAGTACCAGGCGCAGGAGATGTCGACGATGGTGTCGGCGCT
CGCGAGGGTCGTGTCCGGCGGCGACGGCCGCTGGGCCGACGACGGCTGGGAGGACCGCCCTGCAATGGGGGGCTACGTGC
ATGCGCAGGGAGGCTACTATCCCGCCGCGCCGACACCGGATCAGCTCGCAGCAGGTGAGGATTGAGACTCATTGCGGCCG
CTCGTTGTTTATTGTGGGAGGAGAATGTTTGCGC------TTGCAGGTCGGTGTCACCACGTTCCTACACTAGTAACGCT
TTTGCCTCTTTTTTCCTTTGGTTTCTTTGTTTTTTCCGTCAAGTTTGTGTTTATAATTGTGAAAC--GTTCGG--CATGC
ATGTGTTAGTCGTGCGGAACCTAAAGCTGGTGCTGGTGGTTAATCAAACTGTTTGTGACGTGCCCCCTAGTATA------
------------------------AGTGTTCTGGCGTGTTCCATGGGATCCCTTTGCTTGCAACGAGAGGAGTGCCACGT
CAGTTCCATGATAAACAAAGAAAAGACGGAGTGCTACGTCAGAACCACTGCCATGCATGCACTGCACGCAACGACCGTTA
TTGACCGCAAAAATTGCCTTTTCTTCTGTCTACTTTTGACAAGTCTCGGTAGACAGA-----------------------
----------------GATTTCGTTATGTCTCAGTTGATACTACATTCCTGTCATCTTGCATAGAGATTCATGCAAAATT
TTCTTTTCGTTTCACATTTTCTTTTTATATGT---TATATCATTTAACTGAGCTAAAAAATCTAAATAGAAAGAAGAAGA
AAAAGACAGAAAAATGAGGGAATACCAAAC--------------------------------------------------
--------------------------------------------------------------------------------
---TATATGGTTTGTTCAATGCACTCGTGCAACACAACAAATACACCGACCTCCCCAATGTATACCAGCACATGAGCGGT
AGGAACGCACTCCACGTGCACGCAGCCGGTCGACACAGATGAGCGCATCTCTCACTAGATATATGGAAAACAAACAGATA
TGTACCAGTGTACGTACGTATAACCGTATAGTCAGCCGCCCTTTCATACAGTCAAATGGTGCGTGCTGGCCTCTCGCGCT
TATATAGACCATCATCTTCTTTCTTCTTGCTCGGCAGGACAGGAGCGG---AGCCCGGACGTGCAGCAGAGCGCGGCCAT
GGGGGAGCAGTACCCGCACACGTACGGCGGCGGCGGCGGCAAGGCGGCGGCCGCGGAGCAGACGAGCGTGCCGGAGCGGC
GGTACCGCGGCGTGAGGCAGCGGCCGTGGGGCAAGTGGGCCGCGGAGATCCGCGACCCGCACAAGGCCGCCCGCGTGTGG
CTCGGCACCTTCGAGACCGCCGAGGCCGCCGCGCGCGCCTACGACGAGGCGGCGCTCCGCTTCCGCGGCAGCCGCGCCAA
GCTCAACTTCCCCGAGGACGCGCGCCTCACCGCCCCGGCGGCAC---CCACCGCGAGCGCGGCGCCGACGGTGGCCTCCT
CGGCGGCCGCCTACCCCGCCAGCGCCGTCTCGGACTACTTGCAGTACCAGATGCTTCTGCGCGCAGGAGGTGGCGGGTTC
CCGCAGTACTACGGCGGCGGCGGCGCCTCG---------------TCCTCGGGGTCCTACTCGCTCCCGGAGTCGACTGT
GACCGTGGCCTCCGTGCCGTCCTCTGCGTCATCTGCTTCGGGTTACGGCGGTGCGGCGGCGGAGCACGGCGAGGCGGCGC
AGTGGGCGTGGCCCGCGGAGACTGCATGGACCTACCCGGCGACCACGGGTTCGTGGTCCGGTTCGAACCAGTATCCGCCG
CCACCTCAATAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr1D_1_TraesCS1D01G272600
CATGGAGGCCGACTGCCCCAGGGGCGGCGCGCGGGTGCGGAAGCGGCGGCGGCTAGGGTTTGGATCGTGATTAGGCTGAT
ACCATGTTAGAAGGGAGAGAGAGGTTTGGTGGAATATTTTGTTATATTGCTTGAGCCTAGTAGGCATATATATATATATA
TATATATATATATATATATATATATATATATATATATTATATATATATATTATATATAAGTACATGATTTACTTGGAGTA
CACGACAAGTCAGAATACTTCCTAGTTTATCCTATATTTCCTAATACAATCATGGTACTCAGCACTAATGATCCAGCAAA
ATACAATACACGTACTGTATTACTATCTCTTCATCAAAATATAAGACTTTTTAGGCTAAACTGTCTCAGTTCGTATCCGC
ATGCATGATGACCAGTTTGACTTGCTGTACAGTACAGATAGTCAGGCCGACAAAAAAA-AATACTGATGCGTACACACGC
ATGCGGCTGAAACAATGCGTCCATCCATC---ATCCATCGGTCTCCGATCGCCAAGTCTGCCTAACGTACGCCGGCTGCT
AAAATAATGCACGTTTGCGCTCTCTCTCTCGCTC----GCCAGATCTCATCACCGGCCGTCTGATGG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GTCGTCGATCGTCGCCCACTTGCTCTGAAGGGACAGTACGTGGTCAGCGCGAGACTCGGTCCAAATCTGAACCACGCCTT
TTTTTGGCGGC----TCTACCCGCTTAGCTCAGCTAGCTAGTGCTCAGCTCGCTCTAGCTCAGCGTGGCCACCGCGCGTA
CCTCTCGCTCGAAAGAGCCGCATTACATCTTCTTCTTCGCCTCGTCTACTCGAGTACTCATCCTCCATCTCTGATCTCAT
GCCTGTGT----GCGTGTATATGTAGCGGCCAGTCCCCCTCGTGAACTTGAACTCGAACTAGCTAGCTGCCTAGTGGATC
CAAGCTGAGAGTGTTCTGAGCTCGAAGTAGT----TAGCGAGCTAGCGAGCCACTCGAACGATCGCGTGCTGCATGCTGG
CAGCAGCGGCGGCGGCGGTGGCGGCATTACCGGGCTCGCGAGCGTGGTGCGGGATGGCGGGCCGGGAGCAGGATGGTGGA
TGCGGGGAGGCGGCGGGAGGC---TCGGTGCTGTCCGGGGAGTACCAGGCGCAGGAGATGTCGACGATGGTGTCGGCGCT
CGCGAGGGTCGTGTCCGGCGGCGACGGCCGCTGGGCCGACGACGGCTGGGAGGACCGCCCTGCAATGGGGGGCTACGTGC
ATGCGCAGGGAGGCTACTATCCCGCCGCGCCGACACCGGATCAGCTCGCAGCAGGTGAGGATTGAGACTCATTGCGGCCG
CTCGTTGTTTATTGTGGGAGGAGAATGTTTGCGC------TTGCAGGTCGGTGTCACCACGTTCCTACACTAGTAACGCT
TTTGCCTCTTTTTTCCTTTGGTTTCTTTGTTTTTTCCGTCAAGTTTGTGTTTATAATTGTGAAAC--GTTCGG--CATGC
ATGTGTTAGTCGTGCGGAACCTAAAGCTGGTGCTGGTGGTTAATCAAACTGTTTGTGACGTGCCCCCTAGTATA------
------------------------AGTGTTCTGGCGTGTTCCATGGGATCCCTTTGCTTGCAACGAGAGGAGTGCCACGT
CAGTTCCATGATAAACAAAGAAAAGACGGAGTGCTACGTCAGAACCACTGCCATGCATGCACTGCACGCAACGACCGTTA
TTGACCGCAAAAATTGCCTTTTCTTCTGTCTACTTTTGACAAGTCTCGGTAGACAGA-----------------------
----------------GATTTCGTTATGTCTCAGTTGATACTACATTCCTGTCATCTTGCATAGAGATTCATGCAAAATT
TTCTTTTCGTTTCACATTTTCTTTTTATATGT---TATATCATTTAACTGAGCTAAAAAATCTAAATAGAAAGAAGAAGA
AAAAGACAGAAAAATGAGGGAATACCAAAC--------------------------------------------------
--------------------------------------------------------------------------------
---TATATGGTTTGTTCAATGCACTCGTGCAACACAACAAATACACCGACCTCCCCAATGTATACCAGCACATGAGCGGT
AGGAACGCACTCCACGTGCACGCAGCCGGTCGACACAGATGAGCGCATCTCTCACTAGATATATGGAAAACAAACAGATA
TGTACCAGTGTACGTACGTATAACCGTATAGTCAGCCGCCCTTTCATACAGTCAAATGGTGCGTGCTGGCCTCTCGCGCT
TATATAGACCATCATCTTCTTTCTTCTTGCTCGGCAGGACAGGAGCGG---AGCCCGGACGTGCAGCAGAGCGCGGCCAT
GGGGGAGCAGTACCCGCACACGTACGGCGGCGGCGGCGGCAAGGCGGCGGCCGCGGAGCAGACGAGCGTGCCGGAGCGGC
GGTACCGCGGCGTGAGGCAGCGGCCGTGGGGCAAGTGGGCCGCGGAGATCCGCGACCCGCACAAGGCCGCCCGCGTGTGG
CTCGGCACCTTCGAGACCGCCGAGGCCGCCGCGCGCGCCTACGACGAGGCGGCGCTCCGCTTCCGCGGCAGCCGCGCCAA
GCTCAACTTCCCCGAGGACGCGCGCCTCACCGCCCCGGCGGCAC---CCACCGCGAGCGCGGCGCCGACGGTGGCCTCCT
CGGCGGCCGCCTACCCCGCCAGCGCCGTCTCGGACTACTTGCAGTACCAGATGCTTCTGCGCGCAGGAGGTGGCGGGTTC
CCGCAGTACTACGGCGGCGGCGGCGCCTCG---------------TCCTCGGGGTCCTACTCGCTCCCGGAGTCGACTGT
GACCGTGGCCTCCGTGCCGTCCTCTGCGTCATCTGCTTCGGGTTACGGCGGTGCGGCGGCGGAGCACGGCGAGGCGGCGC
AGTGGGCGTGGCCCGCGGAGACTGCATGGACCTACCCGGCGACCACGGGTTCGTGGTCCGGTTCGAACCAGTATCCGCCG
CCACCTCAATAGTGGT-CGTTTCTTGTTTACTTTTGTCCTTCAAGAAAAAGAGTTGCTGTAACACTGGGAAAGCTAGCTC
AGACGTGCGCCGATGGTTCCGTGATGCCGTGCCGTTCAACACTTGAACATGCGCGCGTGCTGGAAGCCAGAGTACGGGAC
GCCACAGCACTGTAATGTTCATGTTCGTTCTTTCGCTTTGTTGATGTTGAAAATCAAGTTTCA-TTTTCTTTTTAAATGA
AAACGAAGGAAGGTTTGGTTTTAGACCAACATCTCCTCGCGT-TTTTGTCGCTACAATGATCTGATAATGTCCTGGCATG
GACCTTTTTCAAAGAAAAATAAAGAAAGGTTTATTCACAGTTGCATAAAGAAAAAGCCAAGTCGTTGGTC----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------GAATGGTAAAATGGACA
AAAATTGGAGACACATATGGCTTGCCTGAAAAAAAAAACTAC---TCCTGTGAGACATATACGAAATAAATGGTAGGGCC
ATCCTTCCTCTACCTCCCTCTAGCC-GATTCATGTTCATCTTATTTCTCTATTTCCCGGTGAATTCTTCCTCCTTCTCCT
GTACCATCTCCCAACTGTCTGCCTCGCCTAGCCCGAGCCGGTGCCTCCCATGTGTTTACGTCGCTCCCGGCCATCTATCA
AACCTCGAACTCTCCTCCAGCAGTGGCGACGTTGCCACATCGACCTGGAGCTACTTCGGGGGCGCTTCTATCCATTACGG
CACCGCCGTCTAGGCCCGTCGGACTCGGAGAGCTTCACCCAAAACCAATAGATGGGAAAGAAAGTTTCAAGCAACCGAGG
ATTAGCAAAACAGACCAAAATTATGTTTTGGCTCTTTATGAAGTACATTTAAAAAGTTGTTGA--ATATATACATTGTTT
GTAGTATTTGGCTCTTTTGTACGAGGCTATGAGCACTATACTCTTAGCTCGGGAATGGTTTGAGCGTTGCAAGTCGTAAC
AGGGTGAAGGAAGCTAAAATGCTACTCCCTTCGTCCCATAATATAAGAGCGTTT
>chr1B_369
TTTTA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CTACACTGTCTCGTTT-GTATCCGC
ATGCATGATGACCAGTTTGACTTGCTGTACAGTGCAGATAGTCAGGCCGACAAAAAAA-A-TACTGATGCGT--ACACGC
ATGCGGCTGAAACAATGCGTCTATCCATG-------ATCGGTCTCTGATCGCCAAGTTTGCCTAACGTACGCCGGCTGCT
AAAATAATGCACGTTTGCTCTCTCTCTCTCTCTCTCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GTCGTCGATCGTTGCCCACTTGCTCTGAAGGGACAGTACGTGGTCAGCGCGAGACTCGGTCCAAATCTGAACCACGCCTA
-TTTTTGGCGGCTC-TCTGCCCGCTTAGCTCAGCTAGCTAGTGCTCAGCTCGCTCTAGCTTAGCGTGGACAC----CGTA
GCTCCCGCTCGAACGAG-CGCATTACATCTTCTTCTTCGTCTGGTCTACTCAAGTACTCGTCCTCCATCCCTGATCTCAT
GCCTGCGTGCGCGCGTGTATATATAGCGGCCAGTCCCCCTCGTGAAGCTGAACTCGAACTAGCCAG----CTAGTGGATC
CAAGTTGAGAGTACTTTGAACTCGAACTAGTTAGCTAGCGAGCTAGCGAGCCACTCGAACGATCGCGTGCTGCATGCGA-
--------GCGGCGGCGACGGCGGCATTACCGGGCTCGCGAGCGTGGTACGGGATGGCGGGGCGGGAGCAGGATGGCGAC
GGCGGGGAGGCGGCGGCAGGCT---CGGTGCTATCCGGCGAGTACCAGGCGCAGGAGATGTCGACGATGGTGTCGGCGCT
CGCGAGGGTCGTGTCCGGCGGCGACGGCCGTTGGGCCGACGACGGCTGGGAGGACCACCCGGCAATGGGGGGCTACGTGC
ATGCGCAGGGAGGCTACTATCCCGCCGCGCCGACACCGGATCAGCTCGCAGCAGGTGAGGATTGAGACTCATTCCGCTCG
CTCGTTGTTTATTGTGAGAGGAGAATGTTTGCGC------TTGCAGGTCGGTGTCACCACGTTCCGACATTAGTAACGCT
TTTGCCTCTTTTTTCCTTTGGTTTCTTTGTTTTTTCCGTGAAGTTTGTGTTTATTATTGTGAACTGTTTTTTTCCCGTGC
ATGTGTTAGTCATGAGGAATCTAAAGCTGGTGCTGGTGGTTAATCAAACTGTTTGTGACGTGCCCCCTAGTATA------
------------------------AGTGTTCTGGTGTGTTCCATGGAATCCCTTTGCTTGCAACGACAGGAGTGCCACGT
CAGCCCCATGATAAACAAAGAAAAGACAGAGTGCTACGTCAGAACCACTGCCATGCATGCACTACACGCAACGACCGTTA
TTGACCGCAAATTTTGC---------------------------------------------------------------
-----------------ATTTCGTTATGTCCCAGTGAATGCTATGTTCGTGCCATCTT-CATGGAGATTCATACAAGATT
TTTTTTCTCATTTTTC-TTTTTTTTTATATACTACTATATCATTTGACTGAGCTAAAAAATCTAAATAGAGAGAAG----
--------GAAAAATGAGAGAATACTCCTACCAAACTAGTACTCCCTCCGTCCGGAAATACTTGTCATTAAAATGAATGA
AAGGGGATGTATCTAGATGTATTTTAATCCTAGATGCATCCTTTTTGTTCATTTTAATGGCAAGTATTTTCGGACGGAGG
GAGTATATGCTTTGTTCAATGCACTCGTGCAACACAACAAATATACC-ACCTCCCCGATGTATACCAGCACATGAACGGT
AGGAACGCACTCCACGTGCACGCAGCCGGTCGACACAGATGAACGCATCTCTCGCTACATTATATGAAAACAAAAATA--
------TGTGTACGTACGTATAACCGTATAGTCAGCCGCCCTTTCATACAGTCAAATGGTGCGTGCTGGCCTCTCGCGCT
TATATAGACCATCATCTTC-TTCTTCTTGCTCGGCAGGACAGGAGCGG---AGCCCGGACGTGCAGAA---CGCAGCCAT
GGGGGAGCAGTACCCGCACACGTACGCCGGCGGCGGCGGCGAGGCGGCGGCCGCGGAGCAGGCGAGCGTGCCGGAGCGGC
GGTACCGCGGCGTGAGGCAGAGGCCGTGGGGCAAGTGGGCCGCAGAGATCCGCGACCCGCACAAGGCCGCCCGCGTGTGG
CTCGGCACCTTCGAGACCGCCGAGGCCGCCGCGCGCGCCTACGACGAGGCCGCGCTCCGCTTCCGCGGCAGCCGCGCCAA
GCTCAACTTCCCCGAGGACGCGCGCCTCACCGCCCCGG---CAC---CCACCGCGAGCGCAGCGCCGACGATGGCCTCCT
CGGCGGCCGCCTACCCCGCCAGCGCCGTCTCGGACTACTTGCAGTACCAGATGCTTCTGCGCGCAGGGGGTGGCGGGTTC
CCGCCGTACTACGGCGGCGGCGGCGGCGGCGGCATCAGTGGCTCCTCTTCGGGGTCCTACTCGTTCCCGGAGTCCTCTGT
GACGGTGGCCTCCGTGCCGTCCTCTGCGTCCTCTGCTTCGGGTTACGGCGGCGCGGCGGCGGAGCACGGCGACGCGGCGC
AGTGGGCATGGCCCGCGGAGACTGCATGGACCTACCCGGCGACCACGGGCTCGTGGTCCGGTTCGAACCAGTATCCGCCG
CCACCTCAATAGTGGTCCGTTTCTTGTTTACTTTTCTGCTTGAAGAAAAGAGTTGCC-GTGACACTGGGAGAGCTAGCTC
AGACGTGCGCCGATGGT---GTGATGCCGTGCCGTTCAACACTTGAACATGCGCGCGTGCTGGAAGCCAGAGCACGCCAC
ACCGCAGCACTGTAATGTTCATGTTCGTTCTTTCGCTTTGTTGATGTTGAAAATCAGGTTTCCCTTTTCCTTTTAAATGA
AGACGAAGGAAGGTTTGGTTTTAGACCAGCATCTCCTCGCGTTTTTTGTCGCTACGCTGATCTGATAATATCCTGGCATA
GACCTTTTTCAAAGAAAAATAAAGAAAGGTT-ATTCACAGTTGGAGAAAGAAAAAGGCAAGTTGTTTTTCTTTAACGCAG
TACAGACCCAAACGCTCGCACATACGCGCATACACTCATCCCTATGAACGCACAAACGCATACCCTATCCTACGAGCACC
TCCGGAAAACTGAGCCGGCATATCATCTTGAGATTTACAAAGTCGCGGTAGGCGCCTCGTTGTCGACGGGAACGTCTCCT
CCCGCTGAAAGCGCGTTGCCGAAAATCCTGAAATAAATTCAGGAATAATGCGAACACCAGGACTTGAACCCTGGTGGGTT
GGGGATACCAATGTACCTCTAGCCATCCAAACACAGATCGGTTCAAAAGCCAAGTTGTTGATTGAATGCTAAAATGGACC
AAAATTGGAGACACGTATGACTTGTCTAAAAAAAACCATCCTGATTCCTGTGAGACGCATACGAAATAAATGGTAGGGCC
ATCCTTCCTCTACCTCCTTCTAGTCAGATTCATGTTCA-CTTATTTCTCTATTTCTCGATGAACTCTTCCTCCTTCTCAT
GTACCATCTCCCAACTGCCTGCCTCGCCTAGG-CGAGCCGGTGCCTCCCATGCGCTGACGTCGCTCCCGGCCATCTATCA
AACCTCGAACTCTCCTCCAGCAATGGCAATGTTGCCACATCAACCCGGAGCTACTTCGGGGGCGCTTCTATCCATTGCGG
CACCATCGTCTAGGCCC------CTCGAAGATATTCATCCAAAATCAATAGACGTGAAAGAAAGTTTCAAACAACTGAGG
ATTAGCAAAACCGACCAAAATTATGTTTTGGCTCTTTATGATGTACATTTAAAAAGTGGTTGGATATATATACATTGTTT
GTAGTATTTGGCTCTTTTGTACGAGGCTATGAGCACTATACTCTTAGCTCGGGAATGGTTTGAGCGTTGCAAGTCGTAAC
AGGGTGGAAGAAGTTAAAATGCTA------------------------------
>chr1A_415
GTTTGAATCCGCATGC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------ACAGTACAGATAGTCAGGCCGACAAAAAATCA-TACTGATGCGT--ACACGC
ATGCGGCTGGAACAATGCGTCCATGAACCATGATCCATCGGTCTCCGATCGCCAAGTCTGCCCAACGTACGCCGGCTGCT
AAAATAATGCACGTTTGCTCTCTCTCTCTCTCTCTCTCGCCAGATCTGATCACCGGCCGTCTGATGG-------------
--------------------------------------------------------------------------------
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GTCGTCGATCGTTGCCCACTTGCTCTGAAGGGACAGTACGTGGTCAGCGCGAGACTCGGTCCAAATCTGAACCACGCCTT
TTTTTTGGCGGCTCTTCTGCCCGCTTAGCTCAGCTATAGCTCGGT-AGCTCGCCCTAGCTCAGCGTGGCCACCGCGCGTA
ACTCCCGCTCGAACGAGCCGCATTACATCTTCTTCTTGGCCTCGTCTACTCGAGTGCTCATCCTCA-------ATCTCAT
GCCTCTGT----GCGTGTATATATAGCGGCCAGTCCACCTCGTGAAGTCGAACTCGAACTAGCCAG----CTAGTGAATC
CAAGCTGAGAGTACTTTGAACTCGAACTGGTTAGCTAGCTAGG----GAGCCACTCGAACGATCGCGAGCTGCATGCGA-
--------GCAGCGGCGGAGGCGGCATTACCGGGCTCGGGAGCGTGGTGCGGGATGGCGGGCCGGGAGCAGGATGGCGAC
GGCGGGGAGGCGGCGGGAGGCTCGTCGGTGCTGTCCGGGGAGTACCAGGCGCAGGAGATGTCGACGATGGTGTCGGCGCT
CGCGAGGGTCGTGTCCGGCGGCGGCGGCGGCTGGGCCGACGACGGCTGGGAGGGCCACCCGGCAATGGGGGGCTACGTGC
ATGCGCAGGGAGGCTGCTATCCCGCCGCGCCGACACCGGATCAGCTCGCAGCAGGTGAGGATCGAGACTCATTGCGGTCG
CTCGTTGTTTATTGTGAGAGGAGAATGTTTGCGTTTGCAGTTGCAGGTCGGTGTCACCACGTTCCTACACTAGCAGCGCT
TTTGCATCC-TTTTTCTTTGGTTTATTTGTTTTCTCCGTCAAGTTTGTGTTTGTTATTGTGAGAGATGTTCGG--CGTGC
ATGTGTTAGTCGTGCGGAATCTAAAGCTGGTGCTGGTGGTTAATCAAACTGTTTGTGACGTGCCCCCTAGTACAAGTGTT
TTTTCTTTTGTGTGTGCCTAGTATAGTGTTCTGGTGTGTTCCATGGAATCCCTTTGCTTGCAACGAGAGGAGTGCCACGT
CAGTTCCATGATAAAGAAAGAAAAGACAGAGTGGTGCGTCGGAACCACTGCCATGCATGCACTGCACGCAACGACCGTTA
TTGACCGCAAAAATTGCCTTTTCTTTTGTCTAGTTTTCTTAACATGGTACAGATGTAAGCGCTTATATACATACGCATAT
ATTCTTGGTCGATTGTGATTTTGTTATGTCTCAATCGATGCTATATTCCTATCATCTTGTACGGAGGTTCAT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------AAAACAAAAATA--
------AGTGTACGTACGTATAACCGTATAGTCAGCCGCCGTTTCATACAGTCAAATGGTGCGTGCTGGCCTCTCGCGCT
TATATAGACCATCATCATC-TTCTTCTTGCTCGGCAGGACAGGAGCGGCGGAGCCCGGACGTGCAGCAGAGCGCAGCCAT
GGGGGAGCAGTACCCGCACACGTACGGCGGCGAGCC------GGCGGCCGCCGCGGAGCAGGCGAGCGCGCCGGAGCGGC
GGTACCGCGGCGTGAGGCAGCGCCCGTGGGGCAAGTGGGCCGCGGAGATCCGCGACCCGCACAAGGCCGCCCGCGTGTGG
CTCGGCACCTTCGAGACCGCCGAGGCCGCCGCGCGCGCCTACGACGAGGCCGCGCTCCGCTTCCGCGGCAGCCGCGCCAA
GCTCAACTTCCCCGAGGACGCGCGCCTCACCGCCCCGGTGGCACCCACCACCGCGAGCGCGGCGCCGACGGTGGCCTCCT
CGGCGGCCGCCTACCCCGCCGGCGCCGTCTCGGACTACTTGCAGTACCAGATGCTTCTGCGCGCAGGAGGTGGCGGGTTC
CCGCCGTACTACGGCGGCGGCGGCGGTTCG---------------TCTTCGGGGTCCTACTCGCTCCCGGAGTCCTCTGT
GACCGTGGCCTCCGTGCCGTCCTCTGCCTCCTCTGCTTCGGGTTACGGCGGCGCGGCGGCGGAGCACGGCGAGGCGGCGC
AGTGGGCGTGGCCCGCGGAGACTGCATGGACCTACCCGGCGACCACGGGCTCGTGGTCCGGTTCGAGCCAGTATCCGCCG
CCACCTCAATAGTGGTC-GTTTCTTGTTTACTTTTCTCCTTCAAGAAAAAGAGTCCCTGTAACACTGGGAAAGCTAGCTC
AGACGTGCGCCGATGGT---GTGATGCCGTGCCGTTCAACACTTGAACATGCGCGCGTGCTGGAAGCCAGAGCACGCCAC
CCCACAGCACTGTAATGTTCATGTTCGTTCTTTCGCTTTGTTGATGTTGAAAATCAAGTTTCA-TTTTCTTTTTAAATGA
AAACGAAGGAAGGTTTGGTTTTAGACCAACATCTCCTCGCGTTTT--GTCGCTGCAATGATCTGATAATATCCTGGCATA
GACCTCTTTCAAAGGAAAATAAAGAAAGGTT-ATTCACAGTTGCAGAAAGAAAAAG------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CCAAGTTGTTGATCGAGTGGTAAAATGGACC
AAAATTGGAGACACATATGGCTTGCCTGAAAAAGAAAACTAC---TCCTGTGAGACATATACGAAATAAACTACTCCTGA
AAAAAAACT------------------ATTCATGATCATCTTATTTCTCTATTTCCCGATGAATTCTTCCTTCTTCTCCT
CTACCATCTCCCAACTGTCCGCCTCGCCTAGCCCGAGCCGGTGCCTCCCATGTGTTGATGTCGCTCCTGGCCATCTATC-
AACCTCGAACTCTCCTCCAGCAGTGGCGACGTTGCCACATCGACCAGGAGCTACTTCGGGGGCGCTTCTATCCGTTGCTG
CACCGCCGTCTAGGCCC------CTCGGAGAGCTTCATCCAAAACCAATAGACGGGAAAGAAAGTTTCAAGCAACTGAAG
AATAGCAAAACCGACCAAAATTATGTTTTGGCTCTTTATGATGTACATTTAAAAAGTTGTTGA--ATATATACATTGTTT
GTAGTTTTTGGCTCTTTTGTACGAGGCTATGAGCAATATACTCTTAGCTCGGGAATGATTTGAGTGTTGCAAGTCGTAAC
AGGGTGGAGGAAGCTAAAATGCTA------------------------------
>SNPs
SS-S--SS---SS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--------SS--S--------
------------------------------------------------------------S-----------SS------
--------------------------------------------------------------------------------
------------------S-----------S----------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
-----S-SS-S-------S-------------------------------------------------------------
S---S--------S-------------------------------------------------------S----------
----------------------S-----------------------S----------------S--SSSS----------
------------SS-S---S------S--------------------------------------------------SSS
SSSSSSSS----------S---------------------------------------------------------S-SS
S-------------------------------------------------------------------------------
--------------------------------------------------------S---S-------------------
-----------------------------------------------------------------------------S--
----------------S---------------------------------------------------------------
------------------------------------------------------S---------S-----------S---
-------------------S------------------------------------------------------------
----------------------------------S-----------S---------------------------------
---------------------------S----------------------------------------------------
-------------------------S------S----SSS--SSSSSSSS---SSS------------------------
-----------------------------------S---S---S------------------S---------S---S---
--S---SSSS--SSSSS---S---------SS-------------S------------------------S-----SSSS
SSSSSSSS----------S------SSSSS--------------------------------------------------
--------------------------------------------------------------------------------
---------S---------------------------------S---S--------S------------------S----
------------------------------------------S----------S---S--SSSSS---------S-S-SS
SSSSSS--------------------------------------------------------------------------
-------------------S------------------------------------------------------S-----
----------------------------------------S--------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
----S--------------------S---------------------S--------------------------SS----
------------------------------S--------------------S----------------------------
-------------------------------------------------S------------------------------
-----------------------------------S------------------SS------------------------
-----------------SSS----------------------------------------------------S---SS--
S-------------------------------------------------------------------------------
---------------------------------------------------------------------S---------S
-------------------------------S-------------S----------S-----S---SS------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
-----------------S-----S----------------------------------S---------------------
--------------------------------------------------------S-----------------------
---------------------------------------------S------------------------------S---
-----------------SSSSSS--------------S--------------S----------------------S----
-----------S-----------------------------S--------------------------------------
--------------------------------------------------------------------------------
------S-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_813
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------CTGATGG
GTCGTCGATCGTC-------------------------------------------------------------------
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>reverse_2580
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-------------------TTTCTTCTTGCTCGGCAGGA-----------------------------------------
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>forward_2377
--------------------------------------------------------------------------------
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-------------------------------------CAAATACACCGACCTCCCCA-----------------------
--------------------------------------------------------------------------------
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>reverse_3438
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------GAC
GCCACAGCACTGTAATG---------------------------------------------------------------
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