>input_sequence_42116
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------ATGCGGCGCCGGCGCTC
TCCTCTGGCGGCGCTGTGGCTCGCCGCGGCGTGGGCTCTGCAGCTGCTCGCAGGCGCCGGGGCCGCGAACCCGACGTGGT
GCATCGTGCGCACCGGAGCGCCGGTGAAGACGGTGCAGGCGGCGCTGGACTACGCGTGCAGCCCCGCGGGCGGCGCCGAC
TGCGCGCCCATCCAGGCCAGCGCCCTCTGCTACCTCCCCAACACCCTCGCCGCGCACGCCTCCTACGCCTTCAACTCCGT
CTACCAGCGCTCCCACGCCGCGCCCGGCGCCTGCGACTTCGCCGGCACCGCCACCGTCACGCTCACCGACCCCAGTCAGT
ACAGACAATTCCTCACGTTTGATTCTATCCTTTGTTCCTCCCTTCTCGGTCACGCATGCGTTG-----------------
--CGCACTCGATTG---CTTCAATTATGCCCTGG---------TTATATTTTAAATCTGCATTGTACTAGTAGTTTATTT
CAAATAAATAG---TAAATTGCATTGAAGTATATTTCAAAAAATATATTTGCATTGTACCGTAGTATGGTGCTTCTTTTT
CCTCGGTTGCAACTTGCAAGCTTCCTATGAGTGC----AATCCCTTCCATGCACGCGTCTCTTTTGCTTTTGCCGCCTTC
TTTGTTTGCTTGACCGGCGTCGCTTTTGCTTTTTTTGC------TTCGTTAGTAGTATCACTACCACTGCACTAATAGGT
AATAGCCGGCGTACTTTTCTTTTTGGAACCTTTGGGATTATGCTTTCATTGGAAGAATTTTTCTCTCAAGAA-------T
AGTCTTTGCGCCTCGATGCATTGAACGAAGAATATATGTGTG--TAGGTCGATTTCTGAAATGTGATGCGCCATTTTCCG
GTAACTTCAGCATGAATGTATTATCCCCCCAAAAAAACCTCTAAACCTCCCGATTAATTGATGGTGTACGTTGAGATATG
CAAAAGTTA-TTCACTGTGTTCATGCATTGCCCAGTTTTCGTCTTGTTTGTGAACCCTATCTTCAGGA-------CTCCC
ACCTTCAGAGTATTTCTATCTGTACCTAGGCATGTTGAGTAATTCAGTTATTATCCAAAAATAATAATAAAATTCCTGAT
ACGATGATGGTGTTGACATGTGCAAAAGTTATTCACTGTATTCACGCATTGCCCATTTTTCGTCCAGTTTGTGAACCCTA
CTTTCAGTTTCAGGACTACCTCCTTCAGAGTATTTCTAGTTGTACATGTACGCCTAGGCAAGTGAAGCGTTTATACACTT
CTATTAATAATCCAGTTTTCTCTTAATTACGTTTTTCAGGTTATGGATCATGCACCTTCCCTGCATCTCCAGG----GTA
CGTGCATCACATTGTACTCGCTTCCATT---TGTACAACTTCACTAAGAATACATGAGGAATTTCTAATAATTCATTAAC
AAACTTCGTTTACGTCTTCTGCAATCCCATGTATCTAGCTAGAAGAGCATGATATTTGCTAGATGAAATTCGAATCATAT
AACACGTCGTAT-ACAT---GAGATGTTTACTTAGCTAAATCTGTGGCTACTC--ACTCTGTTGTGCCGAATTCATTCCA
TCTGCTGTTACGGGAATTTTGCACCT-----AACTTCCAAATTTTTATTTTACCCTGAAAAGAGACAAAAAATTGTAAAA
GATACTCAAAAGAACCCGGTAAGGGAATGATGATCATGCTGACTTCCTATATATATGCAGCGCAGCCGGATCACCCGGTT
CAGCCACGTCTACATCTCGACCACCGCCGGGCAACCGCAAGCCTGACCTTGGATCAGATGACGACGATCCTGACACCGAT
GAGGCTCATGTTGCCACCGCCAATGCACCCTTCATGTCTCTTGCCCTGTCATGTTTCGTGTACCTGCACCTGCGCTGGTG
GTGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------
>chr5B_1_TraesCS5B01G465400
CCTAGCAAAAAAAAAGAGAATATTCAGTCATACTACGGGCTTGTTCTGGACTACTCCGCTCCCTAAAATTCAGTCCCGCT
CTGAAAAACGCAAACCAAATGGGGTAGCTTTGTGATGTTTTGCTTCAAAAAAACTATTTGGGATACAACTTTCAGTTTTT
CGTGAAGATTTTCAAGGTGTGTTCCATAAACTTTAGTTTGAAAAGTCTATTATAGGGTTGGTAAAAATTACCCACCACTG
CCAGCGGTAAGTGGACACCACTTTGTTTTATTTCCCCGCATCACGCAACATTCAATGGACCTGAGACTTGAAGCTAGAGC
TAACTGGAGGCCAAACATGATAAACTGCTCTATGACGGAGCTGCAACTTTTAAGTGAAACAGCTCCAAAGTGGATTTGAT
ATAGTGGAGCTGATTTTGTTGGCGTGGAGCAATCCCAAACAGACCCTAGGTCAGGTGTGCCCAAGTGTTCTATTACATTA
CTTAATGAAGTCTAATGAATTCATGGTTTAGCTTCAGTTAAGGGGGTACATCGTGATGCCATCTTGCTTTGCTCTCTATT
TTATACATTTATTTTAGTGCACTAATTTGATAGGTCAGTTTAGTCGTTAATTACTTATGGTAATC---------------
---------------------------------------------------------------------TAGCACTTTCT
CCATTTTTTATCATCAACCAGAGCCTGATTGCTACTCCTACCTTTTTATTACCAGTTGATCTTCTTCCTCCTCGATGGTC
TTTCCTTTTCCTAGCCCCCCTCTCCTTCACTATCTCCTTTCTCCGGTCGTAATTAGATTAGACACTCC--CCCAAAGGAA
AAGCAAAGAAAAGAAAAGAAAGCAGTTCTCCATGGAAACGGAGAAGGAGATCCTCCTCCTCCTG---GCTCCCGCTCCCG
CTCCCACCATCTTTCTTCTTTCTCATATTCCCTCCCCACCACCTCGCACATATTCCCACCGCCTTTACTCCTTGCCGTC-
-------------CCTCCTCCCGCACCCTCCGCGGCCACGCTTCCCGCAGACTACCTACGTACATGCGGCGCCGGCGCTC
TCCTCTGGCGGCGCTGTGGCTCGCCGCGGCGTGGGCTCTGCAGCTGCTCGCAGGCGCCGGGGCCGCGAACCCGACGTGGT
GCATCGTGCGCACCGGAGCGCCGGTGAAGACGGTGCAGGCGGCGCTGGACTACGCGTGCAGCCCCGCGGGCGGCGCCGAC
TGCGCGCCCATCCAGGCCAGCGCCCTCTGCTACCTCCCCAACACCCTCGCCGCGCACGCCTCCTACGCCTTCAACTCCGT
CTACCAGCGCTCCCACGCCGCGCCCGGCGCCTGCGACTTCGCCGGCACCGCCACCGTCACGCTCACCGACCCCAGTCAGT
ACAGACAATTCCTCACGTTTGATTCTATCCTTTGTTCCTCCCTTCTCGGTCACGCATGCGTTG-----------------
--CGCACTCGATTG---CTTCAATTATGCCCTGG---------TTATATTTTAAATCTGCATTGTACTAGTAGTTTATTT
CAAATAAATAG---TAAATTGCATTGAAGTATATTTCAAAAAATATATTTGCATTGTACCGTAGTATGGTGCTTCTTTTT
CCTCGGTTGCAACTTGCAAGCTTCCTATGAGTGC----AATCCCTTCCATGCACGCGTCTCTTTTGCTTTTGCCGCCTTC
TTTGTTTGCTTGACCGGCGTCGCTTTTGCTTTTTTTGC------TTCGTTAGTAGTATCACTACCACTGCACTAATAGGT
AATAGCCGGCGTACTTTTCTTTTTGGAACCTTTGGGATTATGCTTTCATTGGAAGAATTTTTCTCTCAAGAA-------T
AGTCTTTGCGCCTCGATGCATTGAACGAAGAATATATGTGTG--TAGGTCGATTTCTGAAATGTGATGCGCCATTTTCCG
GTAACTTCAGCATGAATGTATTATCCCCCCAAAAAAACCTCTAAACCTCCCGATTAATTGATGGTGTACGTTGAGATATG
CAAAAGTTA-TTCACTGTGTTCATGCATTGCCCAGTTTTCGTCTTGTTTGTGAACCCTATCTTCAGGA-------CTCCC
ACCTTCAGAGTATTTCTATCTGTACCTAGGCATGTTGAGTAATTCAGTTATTATCCAAAAATAATAATAAAATTCCTGAT
ACGATGATGGTGTTGACATGTGCAAAAGTTATTCACTGTATTCACGCATTGCCCATTTTTCGTCCAGTTTGTGAACCCTA
CTTTCAGTTTCAGGACTACCTCCTTCAGAGTATTTCTAGTTGTACATGTACGCCTAGGCAAGTGAAGCGTTTATACACTT
CTATTAATAATCCAGTTTTCTCTTAATTACGTTTTTCAGGTTATGGATCATGCACCTTCCCTGCATCTCCAGG----GTA
CGTGCATCACATTGTACTCGCTTCCATT---TGTACAACTTCACTAAGAATACATGAGGAATTTCTAATAATTCATTAAC
AAACTTCGTTTACGTCTTCTGCAATCCCATGTATCTAGCTAGAAGAGCATGATATTTGCTAGATGAAATTCGAATCATAT
AACACGTCGTAT-ACAT---GAGATGTTTACTTAGCTAAATCTGTGGCTACTC--ACTCTGTTGTGCCGAATTCATTCCA
TCTGCTGTTACGGGAATTTTGCACCT-----AACTTCCAAATTTTTATTTTACCCTGAAAAGAGACAAAAAATTGTAAAA
GATACTCAAAAGAACCCGGTAAGGGAATGATGATCATGCTGACTTCCTATATATATGCAGCGCAGCCGGATCACCCGGTT
CAGCCACGTCTACATCTCGACCACCGCCGGGCAACCGCAAGCCTGACCTTGGATCAGATGACGACGATCCTGACACCGAT
GAGGCTCATGTTGCCACCGCCAATGCACCCTTCATGTCTCTTGCCCTGTCATGTTTCGTGTACCTGCACCTGCGCTGGTG
GTGACACGGTATGGATATTTGCGTAGTTAGGCTCTGTACGTAGAGCATTGCGTCGCAGCGTCATGATGTAAGAAGCCACC
ACAGTTTTGTTTTTGGGAGGGAATTCGTAGTGATCGCTTGTAGCATTTGTAACCTGCCCGTTCAAGCAAAA-AGGGCTAG
AGTGGCACACATTTGGATTCGTCTGATTCATTTGGATGTTCTTTCGTGTCATGAGCTTGACGTCTAACATTTTCCCATCT
CTGAAATCTTGTCTCAATGTAGGTGACGAATGCAAAATTATTACCAAAGTTTACAAAAAATTAACATTTT-TGTCAAAAC
AATACAGGTCATTTGAGAATATATGATCCGTAAGAGCAACTCTAGCAAGTCGTCATGTCACTTATCTCCATATGTTATAT
GGAGCGCCCTTCATATGGATTTGAAGGCTGCCGGGCCTGTATGGAAACACACACAGAGTCGCCACATGGCTGCCTCCATA
ATTTTC-TTTTCATTTATTCTTTTTTTTGTCGTT--------CAAATTTGTAGGGGCAATTTGAGCTCAATTTAGCATTT
GTAA-CTGCCCGTTCAAGCAACAAGGGGCTAGAGTGGCATACATTTGAATTGGCCTGATTCGTTTGGATGTTCCTTCATG
CCCCGAGCTTGACGTGTACTTCCTTTGCTGCAAAATACTTGAAATTCTGAGTTTGTCTGAAGTCAACCATTTTTATGTCC
CCCCCCCCCACCCCCACCCCAAGAATTGAGCCCAAGCTCCGCCACTGTGATCAACTATATTATAGAAAAAATAGATCAAC
GTCTACAATGCCATCATCCAAGTCGCTCGAATGCACAAACGGTACCTTGTGTCTTACTCCCCCCGTTTCAAAATAGTCAT
CTATTTCTATTTTGGAACGGAGGAAGTACTAATCATGGGCTAGTAGAATCGAGTGCACAAGGTACTCGTATAGCATTGCC
ATGTTCTAAAAAAACATACTCGTCCCATCCACTTGCAGTGTTCGTTCACTGAAAAT
>chr5A_488
AAGTGCC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------AATAAATTCATGGTTTAGCTTCAGTTAAGGGGGCACATTCCGATGCCATCTTGCTTTGCTCTCTATT
TTATACATTTATTTTAGTGCGCTAATTTGTGAGGTTAGTTTAATCATTAATTACCTCTAGTAAGCTACTTCATCCGTCTC
ATAATATAAGAACGTTTTTGACAATTAGTGTAGTGTCAAAAATGTTGTTATATTATGGAACAGAGGGAGTAGTACTTTCT
CCCTTTTTCATCATCGGCC--AGCCTGATTGCTACTACC------TTTTTACCGGTTGATCTTCTTCCTCCTGGATGGTC
TTTGCTTTTCCTAGCCCCCCGCTCCTTCGCTATCTCCTTTCTCCGGTCGTAATTAGATTAGACACTCCGACCCAAAGGAA
AAGCAAAGAGAAGAAAAGAAAGCAGTTCTCCATGGAGATGGAGAAGGAGATCCTCCTCCTGGCTTCCGCTCCCGCTCCGG
CTCCCACCATCT---TTCTTTCTCATATTCCCTCCCCACCACCGCGCACATATTCCCACCACCTTTGCTCCTTCTTGCTG
CCTGAGCCTCTCGCCTCGCCCCGCACCCTCCCGCAGACCAC-------------------TACATGCGGCGCCGGCGCTC
TCCTGTGGCGGCGCTGTGGCTCGCGGCGGCGTGGGCTCTGCAGCTGCTCGCGGGCGCCGGGGCGGCGAACCCGACGTGGT
GCATCGTGCGCACCGGGGCGCCGGTGAGGACGGTGCAGGCGGCGCTGGACTACGCGTGCAGCCCCGCGGGCGGCGCCGAC
TGCGCGCCCATCCAGCCCAGCGCCCTCTGCTACCTCCCCAACACCCTCGCCGCGCACGCCTCCTACGCCTTCAACTCCGT
CTACCAGCGCTCCCACGCCGCCCCCGGCGCCTGCGACTTCGCCGGCACCGCCACCGTCACGCTCACCGACCCCAGTCAGT
ACACG-------------TTGATTCTAT-CTTTGTTCCTTTCTTCTCTGTTACGCACTGTTTAATTAGTATATTATTTTG
GACGAACTCGCATT---GTTTGATTATGCTTATGCCCTTGACATTATGTTTAAAATTTGCCGTGTATATATGGTTTCCCT
CAATC---------------------------------------------------------------------------
---------------GCAAGCTTCCTATCGGTCAGTGTAATCCCTTCCATGCACGCGTCTCTTTTGCTTTTGCCGCCTTC
TTTTTTTGCTTGACCGGTGTCGCTTTTGCTTTTTTGCTTCGTTATTCGTTAGTAGTATCACTACCACTGCACAAATAGCT
GCCTG--------CTTTTGTTCTTGGAACCTTTGGGATTATGCCTTCATTAGGAGATTTTTTTTTTCACTCAAGAAA---
---------------ATGCATTGAACGAAGAATATATGTGTCGCTAGGCCGATTTCTTAATTTTGATGCGCCATTTTTTG
GTAACTTTAGAATGAATGCATTATCCAAAAAAAGACTC--CTAAAATTCCCGATCAAGTGATGGCGTACGTTGAGATATG
AAAAAGTTA-TTCACTGTGTTCATGCATTGCCCAGTTTTCGTACG-----------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GTTTGTGGACCCTA
CTTTCAGTTTCAGGACTACCCCCATCAGAGTATTTCTAGTTGTAC--------ATAGGCAAGTGATGCGTTTACACACTT
CTACTAATAATCCAGTTTTCTCTTA----CGTTTTTCAGGTTATGGATCATGCACCTTCCCTGCATCTCCAGGGTACGTA
CGTGCATCACATTGTACTTGCTTCCATTTATTGTACAACTTCACAAAGAATACATGAGGAATTTCTAATAACTCATTAAT
AAACTTGGTTTACGTCTTCTGCAATCTCATGTATCTAGCTAGAAGAGCATGATATTTGCTAGATGAAATTTGAATTACAT
GCCACCTCGAAT-AACATGAGATATTTATACTTAGCTCAGTCTGTGGCTACTGTGACTGTGTTGTGCTGAATTCATTCTA
TCTGTTGTTACCACAATTTTGCACCT---TAAACTTTCAAATTTATCATGTTGGGTTCC---------------------
---------------------------------------------------TACATGCAGCGCAGCTGGGTCACCCGGTT
CAGCCACGTCCGCATCTCGACCGCCGCCGGGCAACCGCAAGCCTGACCTTGGATCAGACGACGACGATTCCGACACCGAT
GAGGCTCACGTTGCCACCGCCAATGCACCCTTGATGTCTCTTGCCCTCTCCTGTTTCGTGTACCTGCACTTGCGCTGGTG
GTGACACGGTATGGATATTTGCGTAGGTAGGCTCTGTGCGTAGAGCACTGCCAC----------GATGTAAGAAGCCACC
ACAGTTTTGTTTTTGGGAGGGAATTTGTAGTGATCGCTCGTAGCATTTGTAACCTGCCCGTGCAAGCAAAAGGGGGCTAG
AGTGGCAGACATTTGGATTCGTCTGATTCATTTGGATGTTCTTTCGTGTCATGAGCTTGACGTCTAACATTTTTCCATCT
CTGAAATCTTGTCTCAATGTAGGTGACGAATGCAAAATTATTACCCAAGTTCACGAAAATTTAACATTTTTTGTCAAAAC
AATACGAGTCATTTGAGAATATATGATCGGTAAGAGCAACTCTAGCAAGTCTCCATGTCACTGATCTCCATCAGTTATAT
GGAACACGCTTCATATGGATTTGAAGGCTGACGGGCTTCTGCGCAAACACACACTGAGTCGCCACACGGTTGCCACCATA
ATTTTCTTTTTCATTTATTCTTTTTTTTTTGGTCGTTCGCTACAAATTTGTAGGGGCAATTTGAGCTCAGTTTAGCATTT
GTAACCTGCCCTTTCAAGCTAAAGGGGGACAGAGTGGCATACATTTGAATTGGCCTGATTCGTTTGGATGTTCCTTCATG
T-CCCAGCTTGACGTTTACTTCCTTTGTCACAAAATACTTGAAATTCTAAGTTTGTCTGAGGTCAAGCATTTTTATGTT-
-----------------------------------------------TGACCAACTATATTATAGAAAAAATAGATCAAC
ATCTACGACGCCACCACCAACGTCGCTCGAATGCACAAACGGTACCTTGTGTCTTA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>chr5D_685
--------------------------------------------------------------------------------
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------------------------------------------------TTACCAGTTGATCTTCTTCTTCATTGATGTTC
TGTCCATTCCTAGTTACCCT---------CTCTCTCCTTTCTCCTGTCGTAATTAGATAAGACACT-----CCAAAGGAA
AAGCAAAGAAAAGAAAAGAAAGCAGTTCTCCATGGAGATGGAGAAGGAGATCCTCCTCCTGGCTTCCGCTCCCGCTCCCG
CTCCCACCATCTTTCTTCTTTCTCATATTCCCTCCCCACCACCTCGCACATATTCCCACCACCTTTACTCCTTGCCGTC-
-------------TCTCCTCCCGCACCCTCCACGGCCACGCTTCCCGCAGACTACCTACGTACATGCGGCGCCGGCGCTC
TCCTCTGGCGGCGCTGTGGCTCGCGGCGGCGTGGGCTCTGCAGCTGCTCGCGGGCGCCGGGGCCGCGAACCCGACGTGGT
GCATCGTGCGCACCGGGGCGCCGGTGAGGACGGTGCAGGCGGCGCTGGACTACGCGTGCAGCCCCGCGGGCGGCGCCGAC
TGCGCGCCCATCCAGCCCAGCGCCCTCTGCTACCTCCCCAACACCCTCGCCGCGCACGCCTCCTACGCCTTCAACTCCGT
CTACCAGCGCTCCCACGCCGCCCCCGGCGCCTGCGACTTCGCCGGCACCGCCACCGTCACGCTCACCGACCCCAGTCAGT
ACACG-------------TTGATTCTAT-CTTTGTTCCTCCCTTCTCTGTCACGCATGCGTTG-----------------
--CGCACTCGATCGGTTCTTCAATTATGCCCTGG---------TTATCTTTTAAATCTGCATCGTAC---TAGTTTATTT
CAAACAAACAGCAGTAAATTGCATTGAAGTATATTTCAAAAAATATATTTGCATTGTACTAGTATGC--TGCTTCTTTTT
CCTCGGTTGCAACTTGCAAGCTTCCTATCAGTGC----AATCCCTTCCATGCACGCGTCTCTTTTGCTTTTGCCGCCTTC
TTTTTTTGCTTGACCAGCGTCGCTTTTGCCTTTTTTTTGT----TTCGTTAGTAGTATCACTACCACTGCACCAATAGGT
AATAGCCGGCGTACTTTTCTTTTTGGAACCTTTGGGATTATGCTTTCATTAGGAGAATTTTTCTCTCAAGAACACGCAAT
AATCTTTGCGCCTCCATGCATTGAACGAAGAATACATGTGT----AGGTCGTTCTATGATTTTTGATGGGCCATGTTTTG
GTAACTTCACCATGAATGTGTTATCCAAAACAAGACTT--CTAAAATTCATTATGTGATGGT-------GTTGAGATATG
CAAAAGTTACTTCACTGTGTTCATGCATTGCCCAGTTTTCGTCTTGTTTGTGAACCCTATCTTCAGGAATCAGGACTACC
GCCTTCAGAGTATTTCTGTACC------GGCATGTGGAGTAATTCATCCATTTTTTTTAC--------AAAATTCCTGAT
TAACTGACGGTGTTGAGACATGCAAAAGTTATTCATTGTGTTCACGCATTGCCAG-TTTTCATCTTGTCTGTGAACCCTA
CTTC------CAGGGCTACCTCTTTCAGAGTATTTCTAGTTGTAC--------CTAGGCAAGTGAAGTGTTTATACCCTT
CTATTAATAATCCAGTTTTGTCTTA----CGTTTTTCAGGTTATGGATCATGCACCTTCCCTGCATCTCCAGG----GTA
CGTGCATCACATTGTACTTGCTTCCATTTGTAG---AACTTCACGAAGAATACATGAGGAATTTCTAATAATTCATTAAC
ACGTCGAATAACATGAACAAATGCTGTCTTAGT-------------GCATGATATTTGCTAGATGAAATTTGAACTATAT
AACACGTCGAATGACAT---AAGATGTTTACTTAGCTCAACTTGTGGCTACTGTGACTGTGTTGTGCTGAATTTATTTTA
TCTGTTGTTACCACAGTTTTGCACCTTAATAAACTTTCAAATTTATCATGTTGGGTTCC---------------------
---------------------------------------------------TATATGCAGCGCAGCTGGGTCACCCGGTT
CAGCCACGTCTACATCTCGACCACCGCCGGGCAACCGCAAGCCTGACCTTGGATCAGACGACGACGATTCCGATGCCGAT
GAGGCTCACGTTGCCACCGCCAATGCACCCTTGATGTCTCTTGCCCTGTCATGTTTCGTGTACCTGCACCTGCGTTGGTG
GTGACACGGTATGGA---TTGCGTAGTTAGGCTCTGTGCGTAGAGCATTGTCAC----------GATGTAAGAAGCCACC
ACAGTTTTGTTTTTGGGAGGGAATTTGTAGTGATCGCTCGTAGCATTTGTAACCTGCCCGTTCAAGCAAAA-GGGGCTAG
AGTGGCAGACATTTGGATTCGTCTGATTCATTTGGATGTTCTTTCGTGTCATGAGCTT----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>SNPs
SSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS---S-----------------------------S----SSS--------------------------
--------------------S--------SS----S------S--S--------S-S-S----S----------------
------------------------------------------------------------------------S-------
--S-----S------SS--SS---------------S-SSSSSSS--S------------------------S-------
--------------------S-------S---------------------------------------------------
------------------------------------S-S---------------------SSSS----------------
------------------------------------------------------------S-------------------
-------------------------------S------------------------------------------------
------------------------S--------------------------S----------------------------
----------------S----------S----------------------------------------------------
---------------S----------------------------------------------------------------
---------------------S----------------------------------------------------------
---SSSSSSSSSSSSSSS----------S------------------S--------------------------------
-----------------------------------------------S-------------------SSS----------
----S---S--------------------------------------------------SSSSS-SSSS-----------
----------------------------S---------------------------------------------------
---S--------------------------------SS----------------------------------S-------
--------------------------------------------------S-S---------------------------
-S------------S--------------------------S------------------S-S--------------SS-
--------------------------SSSS---S-SS-SS-----SS-------S--S------S---------------
-----------------------------------------------------------------------------S--
S----------------S-SSSSSSSSS-------S----------SSS---S-SSSS-SSSSSSSSS------------
SSSS---S--------S-SS---------------S---S-------------SSS-----S--SS--------------
---------------------------------------------SSSSSSSS---------------------------
-------------------------SSSS---------------------------------------------------
------------------S-------------------------S-----------------------------------
------S-------------------S-------------------------------------------S----S----
---------S---------------------------S--------------S-----S--------S----------S-
----S------SSS----------------------S-------S-SS-S-SSSS-SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S--S----------
----------------------------------------------------------S---------S-S---------
--------S-----------------------S-----------------------------------------------
-------------------------------------S-------------SS-SSSSSSSSSS----------------
-------------------------S------------S---------------------------------S-------
-------S-----------------------------------------------------------------S------
---------------------------------------------S-----S--S----S--------------------
-----SS---------------------S----------------------SS---------S--------SS-------
---S-S-S----------------------S-----S-S-SS-S----------S-----------S--S----S-----
----------------------------S-S--S-----------------------------------S----------
-----------S-------S-S-S----SS--------------------------------------------------
SS--S----------S-----------SSS------------------S-----------S-----S-----------SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-----------------------------
S-----S-S----S--S-S-S-----------------------------------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_94
--------------------------------------------------------------------------CCCGCT
CTGAAAAACGCAAA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_1981
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------ATGTGATGCGCCATTTTCCG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>forward_465
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------CTAGGTCAGGTGTGCCCAAG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------
>reverse_2369
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TACGCCTAGGCAAGTGAAGC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>forward_1764
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TGCTTTTGCCGCCTTC
TTTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_3624
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------AGGGGCTAGAGTGGCATACA-------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------
