>input_sequence_42074
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----------------------AGTTTTTTTTTTCCGCTTTTGGACTGAAATTTTGTCTCTTTCGTGCAGCGTACAATAC
AACGTTTTTTCCGAACGAAATTCCACACATATGTAGACCACATGCATGCGTATTCATGTAAAAAGATTCAAA--------
----------------------ATAAAATGCTCCGTTGCCCCATGTTCTGAAACTCCGTTTGAGTGAACTTTGTACTACT
GCCGGTTGGGACCGACTTGGCGGCCTTTGCTTGCCACGCAAAGAACGGCGGGAGCTGATGACCGGGCCTCTCGGCGCGCG
CGGATCCAGACGCGAAACCAGGA-----GGGCCCCGCCCCCGCGGCCTAATTGCTTACCCGGCAGCAGCAGCCACCACGG
CCACACACGCACCCGCGCCCGCCGCTCCCCAGAAACAAGCACGGCCGCAGCACAGCCAGCGTTCACTGACCACTGTGCTG
CTCAGCTGCCGCCCAGGCACTCTGCTCCCGAGGAACGCGCCAGGCGCCGGCGCCGCCATGGAAGCCGCGGCGGCGGCCGT
GGCGTGCCGAGGAGGCGTGGTGCTCGCGCGGGCACGTCCCGGCCACCGGGCCCGGCGCCACGGCGTAGGCGCGGGA----
--CCCGCCACCCGACGGAGGTTCCTCGTTGTGGCGTCGCCCGGAGAAACCCCCTCCGCGCCCTCGCGCAGCGCCGTGGCG
ATCGCGCAGGAGGTAATTTGCTCCGAAATTCTTGCGCCAGTGCCTCACTGGCTCTGCTCTGCTCTGCTCCCGCGCAATCA
CGCCAGCTCTTCT-----CACATACGATATCCGTCGGCTCGGCGCAGATCGCGCAGGCTGCCGACGAGGACGTCG---CC
TCCGTCAGAGTTGTGCTGATGATGGCCTTCGGCCCAGCCTCGCCCGCAGTCCCGCCGCCCACCGACGGTGAGCTCCACAT
GC------------------------CACAAATCTGGTGTGATTTATGGCGATCAGGAGACCC------------ATTTT
GACTGCCTAGTGCCTACCGTCGCCAGGTCATGCGAGCACGGTGCGCGTCACGTTCGTGCTGGAGAAGAAGTGCGCGTTCG
GGCAGCGGTTCCTGGTCGTCGGCGACGACCCGGCGCTCGGCCTCTGGGACCCGGCCAAGGCGACGGCCCTGGACTGGTCG
GAAGGCCACGTCTGGACGGCGAGGGCGGTAATCTCCCCTCCCCTCCCAAGTCCCAGCCAGTCACTCACATTCTTTCACTC
TCACCGTCTTTGGTCTGGGCTAGGATCTGCCAGCGAACAGGCTGGTCGAGTTCAAGTTCTTGCTGCAGGACCCCTCCGGC
CACGTCCGCTGGCAGCACGGCGGCAACAGGGCTCTGCAGGTAACCGAGGCCTCGAGCGCACTGGTCGTGTACGAAGACTG
GGACGACGCCGGGTGCCAGGAAGTGTCGGAGGCGGCATTACACCTGCCGATCGGAGCGGAGGGGACCGACGCGCTGCTGC
TGGCAGATGATGGCCGGACCGATGTCGA---CGATCAGGCGACCTACGAGGGCTTCATGCATGCCGAGAAGGCACGTGCG
GCTGCAGAAGCTTCTCTGCACGCGGACACGATGTGGCTAAACGGAGCGAACCGGCCACAGGTGAAATGGATTCCCCCAAC
TCTCATTTCGTTG----ATATATGATCATAAGACTGCTTCATCCTAGCTGCAG---------------------------
----------------------TTTACCTTGCAGAAAGATGAGAGGATTCCAGAGGTGCTTCGCAGGAGAGCAAACATGG
CGGCAGCACAAAACGGCGGCCTTGCTTCTGCCGGAAAAGACGGCGACGACATCATCTTGTACGAGGAAGATGCGAACAGG
CCGGCCAGTATGTTCGAAAACGACATGGTCTGGATCAGGAAAGCCCTCCAGGGGTTGCTCCGGAACCTTGGCTTCCACAT
CGGCACAACAAAAACATGAAAAATAAG-----------------------------------------------------
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>chr3A_1_TraesCS3A01G369900
GTCGCTGGCGTCCAAGCCCTTGTTATTCCCTTCCT-TAGACCGCCTCCTTCATCCGTCGTCTCCATGAGCACCGGCGATA
AGACTGGTGAAATGTAGCTGCAGTCTCCGGCGAG---GAGTAGAACATGGGAGATGGACCGGCCCACATGGGACATAAGG
ACATGTCGCCTCCCATGCCATACTCACCATCAGAGCAGTCCGCGCCTTGTTCGTCGCCAGTGGACGTGAGGTCCACGATG
AAAATGGTGGCGCCAATGCTCTCGTCGTCCCATCGGGCCGCCCGAAAGTTTTTCGGCGGCGCGTAGGA----------GC
GTTGTTCTCGTCAGCAATCGCCTGTAGTTGTGCCTCCGCGGCGGCCGCTTCCTGGCGAGAGGCTGCTTGAGCGCGGGCGG
CCTCGTA----GCATGCTGCTCTGCAACGAAGTTAGGGTTC------GC---------------C-----------CGCC
AC--GACCTCCT-CGCTCGTGCGCTCACCGTCTATTTGGCCCTCTGCCATTCGGTGCTGCTCTAGGAGGAATATGTTGTG
CCGTTGTTTCTCCTGCGTCTTCTGGAACGCCGACATAGGCGCCAGCGCAGCCTGCTCCTCCACCATGACGGCATTGAAGT
GTGTCTGCACCTGCTCCATGGTGAAGCCGGCATGCACAGAC---GCG--GGCTCCGGTGCGGTGCCATCGGACCCCGTCT
CCATC----GTGGGGTCGTTCTCGTCGTCGGAGACCTCGGACGAGCTGGCCGGCATGAAATGAACTATTAATAATGTCCT
CCAGGCGATCAAAGACCTTCCAAATTTCCTTTGAGTTTACATCTGAAAAAGCAGGTGAACTTTTGAAAATTGACATCTGA
GCACGGGCAATTTCTGACTGTTAATTTGAAGTTAAAAAAACAAATTTGTATGGCTTGAAAAATTCCAAAATTTTGTGTGC
ATGCACGTGCAGCAGTGCAATATAACGTGCCCAAATTTCACTAATATACGTGCTTGCATGTGAGAGATACAAAAACGACA
AAATACATGCAAATTTGAGGCCAGTTTTTTTTTTCCGCTTTTGGACTGAAATTTTGTCTCTTTCGTGCAGCGTACAATAC
AACGTTTTTTCCGAACGAAATTCCACACATATGTAGACCACATGCATGCGTATTCATGTAAAAAGATTCAAA--------
----------------------ATAAAATGCTCCGTTGCCCCATGTTCTGAAACTCCGTTTGAGTGAACTTTGTACTACT
GCCGGTTGGGACCGACTTGGCGGCCTTTGCTTGCCACGCAAAGAACGGCGGGAGCTGATGACCGGGCCTCTCGGCGCGCG
CGGATCCAGACGCGAAACCAGGA-----GGGCCCCGCCCCCGCGGCCTAATTGCTTACCCGGCAGCAGCAGCCACCACGG
CCACACACGCACCCGCGCCCGCCGCTCCCCAGAAACAAGCACGGCCGCAGCACAGCCAGCGTTCACTGACCACTGTGCTG
CTCAGCTGCCGCCCAGGCACTCTGCTCCCGAGGAACGCGCCAGGCGCCGGCGCCGCCATGGAAGCCGCGGCGGCGGCCGT
GGCGTGCCGAGGAGGCGTGGTGCTCGCGCGGGCACGTCCCGGCCACCGGGCCCGGCGCCACGGCGTAGGCGCGGGA----
--CCCGCCACCCGACGGAGGTTCCTCGTTGTGGCGTCGCCCGGAGAAACCCCCTCCGCGCCCTCGCGCAGCGCCGTGGCG
ATCGCGCAGGAGGTAATTTGCTCCGAAATTCTTGCGCCAGTGCCTCACTGGCTCTGCTCTGCTCTGCTCCCGCGCAATCA
CGCCAGCTCTTCT-----CACATACGATATCCGTCGGCTCGGCGCAGATCGCGCAGGCTGCCGACGAGGACGTCG---CC
TCCGTCAGAGTTGTGCTGATGATGGCCTTCGGCCCAGCCTCGCCCGCAGTCCCGCCGCCCACCGACGGTGAGCTCCACAT
GC------------------------CACAAATCTGGTGTGATTTATGGCGATCAGGAGACCC------------ATTTT
GACTGCCTAGTGCCTACCGTCGCCAGGTCATGCGAGCACGGTGCGCGTCACGTTCGTGCTGGAGAAGAAGTGCGCGTTCG
GGCAGCGGTTCCTGGTCGTCGGCGACGACCCGGCGCTCGGCCTCTGGGACCCGGCCAAGGCGACGGCCCTGGACTGGTCG
GAAGGCCACGTCTGGACGGCGAGGGCGGTAATCTCCCCTCCCCTCCCAAGTCCCAGCCAGTCACTCACATTCTTTCACTC
TCACCGTCTTTGGTCTGGGCTAGGATCTGCCAGCGAACAGGCTGGTCGAGTTCAAGTTCTTGCTGCAGGACCCCTCCGGC
CACGTCCGCTGGCAGCACGGCGGCAACAGGGCTCTGCAGGTAACCGAGGCCTCGAGCGCACTGGTCGTGTACGAAGACTG
GGACGACGCCGGGTGCCAGGAAGTGTCGGAGGCGGCATTACACCTGCCGATCGGAGCGGAGGGGACCGACGCGCTGCTGC
TGGCAGATGATGGCCGGACCGATGTCGA---CGATCAGGCGACCTACGAGGGCTTCATGCATGCCGAGAAGGCACGTGCG
GCTGCAGAAGCTTCTCTGCACGCGGACACGATGTGGCTAAACGGAGCGAACCGGCCACAGGTGAAATGGATTCCCCCAAC
TCTCATTTCGTTG----ATATATGATCATAAGACTGCTTCATCCTAGCTGCAG---------------------------
----------------------TTTACCTTGCAGAAAGATGAGAGGATTCCAGAGGTGCTTCGCAGGAGAGCAAACATGG
CGGCAGCACAAAACGGCGGCCTTGCTTCTGCCGGAAAAGACGGCGACGACATCATCTTGTACGAGGAAGATGCGAACAGG
CCGGCCAGTATGTTCGAAAACGACATGGTCTGGATCAGGAAAGCCCTCCAGGGGTTGCTCCGGAACCTTGGCTTCCACAT
CGGCACAACAAAAACATGAAAAATAAGATCCTGT-----GTACGGTACA------------------------------G
ATCATATAATGTTTCTTACTG-TATTTGAGAACCATTTTTCCTTTTCACGATGCGTGCAACCCCGAAGGAATGAGATTGC
CCGGAGCTGCAACGCAAACAGTCGCT------GCACGCTGTTGCCGGTAGGAACTCCTCCAATGGAAGCTGTTAATATTG
TTATCAGTGGTTTCGACTTCTTATCTA----------------------------------------------------C
TTATTTCAAACAAGGAGCAGATGCGA-TTGCTATTCCGTCATGAGTATAGCTAGAAGTAATACTGAATATAGAAAATTGC
GGCATTTCGGCACCCATATGGTTATTGTAAAACAGAACAAGGGCGATTTCGTAGGCGTACAATCATGGTCTAGTAACATG
TACTCGTGTCTATCCTTGTGAGGGCGTGGACAATGGTTGATAAAATAGTAA---GTATTATCCTACGTCTGTCACATAAT
ATATATGGCAATGAAATATGTTGTACAATGAATTATCTTTGTCTTATCATTAGTAACTAGATATACCTAAATATGAAGAC
CGGTTTATGACTTATGAC---TTAAGAGGGTGGTTGTACCCCGGTTCATCAAGAGTCAAACTTTAGCTTTATCATATGTG
TGTCTCGTAAATGAGGAATATTGTTTCGGATCTTATGGTGGTGACTTCATCAATTTCAAGACTCGTCTACTTATAGAGGT
AGAATGTGTGTCTTTTTATAAGGATAAGTGTATGTGCATGTATATGACAGTTGTACTGTGCTTCTAAAAGAAAATAAGTT
GTACTGTGCTTCTAAAAGAAAATACTTGGACATGTAGTGACAAATATTGTTGCTAAGAGATCGTCCTTTAACTACTAAAA
GAAAACAAGCATTTTCTTCTAGGTTTTTTATCCTTCACCGCAGTGTTTATCCTACCTGACATTCACCTCAACGTGACATT
CGTAATATATTAGTGTAGATATTATTATCCTAATGAGAGGTGCTTAGAGAAATAAATCATTTTTCTCTCAAGCATCGATA
CTTATTTA
>chr3D_3
--CGCCGGCGTCCAAGCCCTTGTTATTCCCTTCCT-GGGACCGCCTCCTCCATCCGTCGTCTCCGTGAGCACCGGCGATA
AGACCGGTGAA----ATCTGCAGTCTCCGGCGAGGAAGAGGAGAACATGGGAGATGGACCGGCTCACATGGGACATAAGG
ACCTGTCGTCTCCCATGCCATACTCATCATTGGAGGAGTCTGCGCCTTGTCCGTCGCCAGTGGACGTGAGGTCCA--ATG
AAAATGGTGGCGCCGGTGCTCTCGTCGTCCCACCGGGCCTCCCGAAAGTTCGTCGGCGGCGCGTAGGAGC----------
GTTGTTCTCGTCCGATTCGTGTAAAAAGATTCAT----------------------------------------------
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---------------------------------------------GTGGTCCG---------------------------
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---------------------------------------------------ATTCATGTAAAAAGATTCAAATCTTTTAA
GCAATTGTTTTGGGGGTTCAAAATAAAGTGCTCCGTTGCCCCATGTTCTGAAAATCCGATTTAGTGAACTTTGTACTACT
GCCAGTTGGGACTGACTTGGCGGCCTTTGCTTGCCACGCAAAGAACGGCGGGAGCTGA---CCGGGCCACTCGGCGCGCG
CGGATCCAGACGCGAAACCAGGA-----GGGCCCCGCCCCCGCGGGCTAATTGCTTACCCAGCAGCAGCA---------G
CCACACACACACCCGCGCCCGCCGCTCCCCAGAAACAAGCACGGCCGCAGCACAGTCAGCGTTCACTG-------TGCTG
CTCAGCTGCCGCCCAGGCACTCTGCTCCCGAGGAACGCGCCAGGCGCCGGCGCCGCGATGGAAGCCGCGGCGGCGGCCGT
GGCGTGCCGAGGAGGCGTGGTGCTCGCGCGGGCACGCCCCGGTCACCGGTCCCGGCGCCACGGCGTAGGCGCGGGAGCCG
GACCCGCCGCCCGACGGAGGTTCCTCGTCGTGGCGTCGCTCGGAGAAGCCCCCTCCGCGCCCTCGCGCAGCGCCGTGGCG
GTCGCGCACGAGGTAATTTGCTCCGAAACTCTGGCGCCAGTGCCTCACCGA-----CTCTGCTCTGCTCCCGCACAATCA
CATCAGCTCTTCTCATCTCACATACGATATCCGTCGGTTCGGCGCAGATCGCGCAGGCCGCCGACGAG---GACGTCGCC
TCTGTCAGAGTTGTGCTGATGATGGCCGTCGGCCCAGCCTCGACCGCAATCCCGCCGCCCCCCGACGGTGAGCTCCACTT
CCACTTCCACTCGTGCCTAC---------AAATCCGGTGCGATTTATGGCGATCAGGAGACCC------------ATTTT
GACTGCC---TGCCTGCCCTCGCCAGATCACGCGAACACGGTGCGCGTCACGTTCGTGCTGGAGAAGAAGTGCGCGTTCG
GGCAGCGGTTCCTCGTCGTCGGCGACGACCCGGCGCTCGGCCTCTGGGACCCGGCCAAGGCGACCGCCCTGGACTGGTCG
GCGGGCCACGTCTGGACGGCGAGGGCGGTAATCTCCCCTCCCATCCCAAGTCCCAACCAGCCACTCACATTCTTTCACTC
TCACCATCTTTGGTCTGGGCTAGGATTTGCCAGCGAACAGGCTGGTCGAGTTCAAGTTCTTGCTGCAGGACCCCTCCGGC
CACGTCCGCTGGCAGCACGGCGGCAACAGGGCTCTGCAGGTAACCGAGGCCTCCAACGCGTTGGTCGTGTACGAAGACTG
GGACGACGCCGGGTGCCAGGAAGTGTCGGAGGCGGCATTACATCTGCCGATCGGAGCGGAGGAGACCGACGCGCTGCTGC
TGGCAGATGATGGCCGGACCGA---CGACGGCGATCAGGAGACCTACGAGGGCTTCATGCATGCCGAGAAGGCACCTGCG
GCTGCAGAAGCTTCCCTGCACGCGGAAACGACGTGGGTACATGGAATGAACCGGCCACAGGTCAAATGGATTCTCCAA-C
TCTCATTTGGTTGATATATATATGATCATAAGACTGCTTCATCCTAGCTGCAGCCCGGCAACTTGATCTTGAACGATCAC
TACATGTTGTTTTGTGATGCAGTTTACCTTGCAGAAAGACGAGAAGATTCCAGAGGAGCTTCGCAGGAGAGCAAACATGG
CGGCAGCACAAAACGGCGGCCTTGCTTCTGCCGGAATAAACGGCGACGACATCATCTTGTACGAGGAAGCTGCGAACAGG
CCGGCCAGTATGTTCGAAAACGACATGGTCTGGATCGGGAAAGCCCTCCAGGGGTTGCTCCGGAACCTTGGTTTCCACAT
CGGCACAACAAAAACATGAAAAATAAGCATCCTGTGTACGTACGGTACAGATCATATACTGTTTCTTTTTTTTTTGAGGG
ATCATATAATGTTTCTTACTG-TAGTTGAGAACCATTTTTCCTTTTCACGATGCATGCAACCCCGAAGGAATGAGATTGC
CGGGAGCTGCAACGCAAACAGTCGCT------GCACACTGTTGCCGGTAGGAACTCCTCCAGTGGAAGCTGTTAATATTG
TTATCAGTGGTTTCGACTTCTTATCTA----------------------------------------------------C
T-------------------------------------------------------------------------------
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>chr3D_3
--CGCCGGCTTCCAAGCCCATGTTGTTCCCTTCCTTGGGACCGCCTCCTACTTCCGCGGTCTATATGAGCACCGGCAATA
AGACCCATGAAGTGAAGCTGCGGTTTTCGATGAGAAAGAGTTAAACATGGGAGACGGACCGACCCACATGGGACACAAGG
CCCTCCCACCTCCCGTGCCCTACTCATCCTCGGAGGAGTCCGCGCCTTGTCTGTCGCCAGTGGATGTCAGGTCCACGATG
GAAATGGTGGCGCCCGCGCCGTCTTCATCCCACCGGGTCGCCGGATAGTTCGTCGGCGACGCGTAGGAGCTGCAGGGAAC
GTTGTTGTCCTCCGCAATCGCTTGAAGCCGCGCCTCTGCGTCGGCTGCTGCCTGGCGAGCAGCGGCTTGAGCGCGGACGT
CATCGTAGATGGCACTCTGCTCCGTGACGAAGTTGGGGTTC------GC---------------CGTG---------GC-
-CATGGCCGCCACGGCCTCGTCGCTCCCCCTAGATCTAGCCTTCTGCCAGCCGGTGGTGCTCCAGGAGAAACATGGTGTA
CTGTTGTTCCTCATGTGCCTGCTGGAACGCCGACACAGGCGCCGACGCAGGTTGCACCTCTGCCATGGCGACATTGCAGT
GCGTCTGCACCTGCTCCATGGTGAAGCCGGCATGCACATGCA---TG--GACGCCAGGGCGGTGTCGTCGGAGCCCGTCT
TCATATATAATGGGGTCGACC-CGTCATC-GAAATGTCAGGCGAGCTGGCCGGCA-------------------------
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>chr2B_3
--CGCCGGCGTCCAAGCCCTTGTTGTTCCCATCCT-GAGACCGCATCCTCCATCCGCCGTTTTCATGAGCACCGACGATA
AGACCCGTGAACTGAAGGTGTGGTCTCGGACGAGAAAGAGTAGAATATGAAAGACAGACCGGCCCACATGGGACACAAGG
CCCTGCCGCCTCCCGTGCCCTACTTACCCTCGGAGGAGTCCGCGACCTGTCCGTCGCCGATGGACGTGAGGTCCACGATG
AAAATGGTGCCGCTCGCACTGTCGTCATCCTACAGGGCTGCCAAATAGTTCGTCGACGATGCGTGT-AGGCGCAGCTGAC
ATTGTTCTCCTTGGCGATCGCCTACAATTACACCTCCACAACGGCTGCTTCCTGTCGAGCGGCCGCTTGAGCGCGGGTGA
CCTTTTAGATCGCATGCTGCTCCACGACGAACTTGGGGTTC------GT---------------CACGGCGATGATCGTC
AC--GGCCTCCT-CGCTCGCGCGCTCGTCGTCGATCTGACCCTCCGCCAGCCGGTGCTGCTCCAGGAGGAACATGTCGTA
CCGCTACTCCTCCTGCGCCTGCTGGAACAACGATATAGG-----------------------------------------
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>chr7B_42
GCCGTC-----------------------------------------CTCCTTCCGCCGTTTCCATGAGCACCGGCGATA
AGACCGATGAAGTGAAGGTGCGATCTCCGGCGAAGAAGAGTAGAACACGGGAGACGGACCGGCCCACATGGGGCACCAGG
TCACGCCGCCTCCCGTGACCTACTCATCCTCGGAGGAGTCCGCGCCTTGTCCGTCGCCGGTGGACGTGAGGTCTACGAGG
GAAATGGTGGCGCCTTGGCTATCGTCGTCCCACCGGGCCAGCTGATGGTTCGTCGACGACGTGTAGGAGGTGCAACTGGC
TATGTTCTCCTCCGCGATCGCCTACAACTGCGCCTCCGCGGCTGCCTCTTCCTGGCGAGCGGCAGCTTGAGCGCGAACGA
CATCGTAGATGACGCGCTGCTCCGTGATGAAATTTGGATTC------GC---------------CGCA---------GC-
-C--GGCCTCCT-TGCTCGCGCGCTCACCGTAGATCTGGCCCTCCACCAGCTGGTGCTGCTCCAGGAGGAACACGTTGTC
CCGTTGTTCCTCCTGCGCTTGCTGGAACACCGACAAAGGCGCCGACGCAAGCTACACCTCCGCCATGACGGCGTTGAACT
GCACCTGCGCCTGCTCCATGGTGAAGCCGGCATGCACGGGAAACACGGGAGCTGA--GGCGGAGTCATCGGAGCCCGTCT
CCATC----GTGGTGTCTTCCTCATCATCGAAGACCTCAGACGAGCTGGCCGGCA-------------------------
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>chr7D_43
-------------------------------------------CCTCCTCCATCCGCCGTCTCCATGAATGGCGGCGGTA
AGACCCGTGAAGTGAAGGTGCGGTCTCCGGCGAGGAAGAGTAGAACGCGGGAGACGGACTGGCTCACATGGGACACAAGG
CCATGCCGCCTCCCATGTCCTACTCATTCTCGGAGGAGTCTGCGATCTGTCCGTCGCTGGTGGATGTGAGGTCCATGATA
GAGATGGTGGGGCTGGCACTGTCATTGTCCAACCGGTCCGCCCGATAGTTTGTCGGTGGCGCGTAGGAGGCGCAGATGGT
GTTGTTCTCATCCGCGATCACGTGCAGCCGCGCCTCTGCGACGGTCGCTTCCTAGCGAGCGGCGGCTTGAGCACGGACGA
CCTCGTGGATCGCACGCTGCTCCGCAATGAAGTTGGGTTC-ACCGCGG---------------------------TCATC
AC--GGCCTTCG-CGTTCCCGCCCTCGCCGTCTATTTGACCCTCTGCCAGCCGGTGCTGCTCTAGGAGGAACAAGTTGTA
CCACTGTTCCTCGTGCGCTCGCTGGAACGCCGACATAGGCGCCGGCGCAGGCTGCTCCTCCGCCATGGCGACGTTGTAGT
GTGTCTGCACCTGCTCCATGGTGAAGTCTACATGCACATGC---GTG--GGCTCCGGTGCGGTGTCATCGGAGCCCATCT
CCATC----GTGGGGTCATCCTCGTCATCGAAGACCTTGGGCGAGCTGGTCGACATG-----------------------
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>chr7D_45
---------------------------------------------TCCTCCATCAGCCGTCTCCACAAGCATCGGCGATA
AGACCCGTGAAGTGAAGGTGCGGTCTTCGGCGAGGAAGAGTAGAACACGGGAGACGGACCAACCCACATGAGACACAAGG
CACCGCCGCCTCCCATGGCCTAGTCATCCTCGGAGGAGTTTGCGACCTGTCCGTCGCCGGTGGACGTGAGGTACACGATG
GAAATGGTGGCGCCAGCTCTGTCTTGGTCCCATTGGGCCGGCTGATGAATCGTCGGCGGCGAGTAGGAAGCGCATCTGGC
GTTGTTCTCCTCCGCAACCGCCTGCAGCTGCGCCTCCGCGGCGGCCGCTTCCTGGCGAGCGGCGGCTTGAGCGCAAACGG
CATTGTAGATGGCACGTTGCTCCACCACGAAGTTGGGGTTC------GC---------------C---------------
AC--GGCCTCCT-CGCTCGCGCGCTCGCGGTAGATCTGGCCCTCCGCCAGCCGGTGCTGCTCCAGAAGGAACATGTTGTA
CCGTTGTTCCTCCTGCGTTTGCTGGAACGCCG------------------------------------------------
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>chr7B_45
---------------------------------------------TCCTTCATCCGCCGTCTCCATGAGCACCGGTGATA
AGACTGATGAAGTGAAGGTGCGCTCTCTAGTAAGGAAGAGTAGAACATGGGAGACGGACCGACACACATGGGACATAAGG
TCAAGCCGCCTCCTGTGCCCTACTCATTCTCGAAGGAGTCTGTGCCTTATCCGTCGCCGGTGGACGTGAGGTCCACGATG
AAAATGGTGGTGC-CGCGTTGTCGTTGTCCCGTCGCGGCGCCTGATAGTTCGGCGGTGGCGCGTAGGAGGCATAGCTGGT
GTTGTTCTCGTCCGCGGTTGCCTGCAGCTGTGCCTCCACGGTAGCTGCTTCCTGGCGAGCGGCGGCTTGAGCACGGACGG
CCTTGTAGATCACACACTGCTCCGTGACGAAGTTGGGGTTC------GCGTGGCCACGG-----C-----------CGCC
AC--AACCTCCT-CACTTGCGCGCTCACCGTTGATTTGGCGCTTGGTCAGCCGGTGCTGCTATAGGAGGAACAGGTTGTA
CCGTTGTTCCTACTACACCTGCTGGAATGCCGACATAGGCGCCGCCGCAGGCTGCTCCTCTACCATGGTGGCGTTGAATT
GCGCCCGTGGCTGTTCCATGGTGAAGCCGACATGCACAGGT---GCG--GGCTCCTGTGCGGTTTCGTAGGAACCCCTCT
CCATT----GTGGGGTCATTGTCGCTGTCGAAGACCTCGATCAAGCTGGCCGGCATG-----------------------
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>chr4D_45
---------------------------------------------TCCTCCATTTGCCGTCTTCATGACCACCGGCGATA
AGACCGATGAAGTGAAGGTGCGGTCTCCGGCGAGAAAGAGTAGAA-ACGGGAGACGAACCGTCCCACATGGGACACAAGG
CCTTGCCGCCTCCCGTGGCCTACTCATCCTTGGAAGAGTCCGTGACCCGTCC-TCGCCGATGGACGTGAGGTCCACGATG
GAAATGGTGGCGCCAGCGCTGTCGTTGTCCCACCGGGCCGCCTGATGGTTCGTCGTCGGCTTGTAGGAGGCCCAGCTAGC
GTTGTTCTCCTCCGCGATCGCCTGCAACTGCGCCTCCGCGGCGGCCGCTTCCTGGCGAGCGACAACTTGAGCGCGGATGG
CGTCGTAGATGGCACGCTGCTCCACGACGAAGATGGGGTTCACCGCGGC---------------C---------------
AT--GGCCTCCT-CGCCCGCCCGCTCACTGTAGATCCGGCCCTCCGCTAGCCGGTGCTGCTTCGGGAGGAACATGTTGTG
CCGCTGTTCCTCCCGCGTTTGCTGGAACACCGACAAAGGTGCCG--GCAGGCTGTACCTCCTCCGTGGCGGCGTTGTAGT
GCGCCTGCGCCTGCTCCATGGTGAAGCCGGCGTGCACAGGAGGCGCG--GGAGCCGGGGCGGTGCCGTCGGAGTCCATCT
CCATC----GTGGTCTCTTCCTTGG-CTCGGAGACCTCAGGTGAGCTTGTCGGCA-------------------------
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>chr4D_45
---------------------------------------------TCCTCCGTCCGCCGTCTCCATGAGCAACGGCGATG
AGACCCATGAAGTGAAGGTGCTGTCTCTGGCGAGGAAGAGTAGAACACGGGAGACAGACCGGCCCACATGGGACATCAGG
CCCTATCGCCTCCCTTAGCCTTCTCATCCTCGGAGAAGTCTGTGACCTATCCGTCGCCGGTGGACGTGAGGTCCACGATG
AAAATGGTGGCGCCGGCACTATCGTCATCCCACCGGGCCGCCTGATAGTTCGGCGGCGGCGCGTCGGAGGCGCAGCTGGC
GTTGTTCTCCTCTGTGATCGCCTGCAGTTGTGCCTCCGCGGCTGCCGCTTCCTGGCGAGCGACGGCTTGAGCGCGGATTG
CATCGTAGATGGCACGCTGCTCCACGACGAAGTTGGAGTTC------GC---------------CGCTACCATGGCTGCC
AC--GGGCTCCT-CACTCGCGAGCTCACCGTAGATCTGGCCCTCCGCCAGTCAATGCTGCTTCAGGAGGAACATGTTGTA
CCGTTGTTCCTCATGCGCCTGTTGGAACACCAACA---------------------------------------------
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>chr7A_45
---------------------------------------------TCCTCCATCCGCCGTCTCCATGAGCACCGGCGATA
AGATCGATGAAGTGAAGGTTCGGTCTCCGGCGAGGAAGAGTAGAGCACGGGAGACGAACTGGCCCACATGGGACACAAGG
TCCTGCTGCCTCCCGTGGTCTACTCATCCTCGGAGGAGTACGCGACCTGCCCGTCGCCGGTGGACGTGAGGTCCATGATG
GAAATGGTGGCGTCGACGTTGTTGCCATCCCACGAGACCAACTGATGGTTCGTCGGCGGCGCGTAGGAGGCGCAGTTGGC
GTTGTTCTCGTCCGCGATCACCTGCAACCGTGCCTCCACGGCGGCCGCTTCCTGGCGAGTGGCGGCTTGAGCGCGGACGA
CATTGTAGATGGTACGCTGCTCCGCGACGAAGTTATGTTT------------------------------------TGCC
AC--GGCATCCT-CGCTCGCACACTTGTCGTAGATCTGGCCCTCAGCCAGCCGATGCTGCTCCATGAGGAACAGGTTGTA
CCACTGTTCCTCTTGCGCCTGCTGGAACACCGACAAAGGCGCTAGCGCAAGCCGCACTTCCGCAATGGCGACGTTGTAGT
GTGCCTGTTCCTGCTCCATGGTGAAGCCGGCATGCACAGGAGGCGCG--GGAGTC-GGGTGGTGTCATCGGAGCCCGTAT
CCATG----GTGGTATCGTCCTCGTCCTCGGAGACCTCGGACG-------------------------------------
--------------------------------------------------------------------------------
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--------
>chr1A_45
---------------------------------------------TCCTCCATCCGCCGTCTTCATTACCACCAGCGATA
AGACCGATTAAGTGCAGGTGCGGTCTCCGGCGAGGAAGAGTAGAACACGGGAGACGGACCGGCCCACATTGGACATAAGG
CCC---CGCCTCCCGTGGCCTACTCATTCTCGAAGGAGTCCGCGACCTGCCTGTCCCCGGTGGACGTGAGGTCCACGATG
GAAATGGTAGCGTCGGTGTTGTCGTCGTCCCACCAGGCCGCCTGATAGTTCGTCGGCGGCACG-----------GATGGC
GTTCTTCTCCCCCGCGATCGCATGCAGTTGTGCCTCCGCGGCGGCCGCTTCCTAGCGAGCGGCGGCTTGAGCGCGGACGG
CATCATAGATGGCACGCTGCTCCGCGGCGAAGTTGGGGTTC------GC---------------CGCA---------GCC
AT--GGCCGCCAAG----GCCTCCTCGCCGTCAATCTGGCCCTCCTCCAGTCGGTGCTGCTCCAGAAGGAACATGTTCTA
CCGTTGTTCCTCCTGTGCATGCTGGAACACCGACAAAGGTGCCGGCGCGGGCCGCACCTCCGCCATGGCGCCGTTGTAGT
GCGCATGTGCCTGCTTCATGGTGAAGCCGACGTGCACA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------
>chr6B_50
--------------------------------------------------CATCCGCCGTCTCTATGAACACCGGCGATA
AGGCCCGTGAAGTGAAGGTGTGGTCTCCAGCGAGGAAGAGTATAACATGTGAGATGGACCGGCCCACATGGGACATAAGG
CACTGTCGCCTCCCGTCGCCTACTCATCCTCAGAGGAGTCTGCGACCTGTCTGTCACCGGTGGACGTGAGGTCCAAGATG
GAAATGGTGGCGTCGGCGCTGTCGTCGTCCCACCGGGCCGCCTGATGGTTCGTCGGCAGCGCGTAGGAGGCGAAGCTGGC
GTTGTTTTCCTGCGCGCTCGCCTGCAGTTGCGCCTCCACGGCTGCCGCTTTCTGGCGAGCGATGGTTTGAGCGTAGACGG
CA-TGTAGATGGCACGCTGCTCCGCGACGAAGTTGGGGTCC------GCCGCGACCATGGCTGCC---------------
AC--GGCATCCT-CGCTCCTGCGCTCACCGTAGATCTGACCATCCGCGTGTCGGTGCTGCTCCAGGAGGAACATGTTGTA
CCGTTGTTCCTCCTGCACCTGCAGGAACACCGACAAAGGTGCA------TGTTGCACCTCCGCCATGGCGCCGTTATAGT
GCGTCTGCACCTGCTCCATGGTGAAGTCGGCGTGTACAGAG---GCGCGGGAGTCGGGGTGGTGTCGTTGGAGCCCCTTT
CCATC----ATGGTGTCGTCCTCGTCGTCGGAGACCTCAGGCGAGCTGGCCGGCA-------------------------
--------------------------------------------------------------------------------
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--------
>chr4B_198
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GCACCTTGTCCATCTCCGGTGGACGTGAGGTCCATGATG
GAAAAGGAGGCGCCGGCGCTCTCATCGTCCCACCAGGCGGCTCGAAAGTTCACGGGCGGCTCGTAGGACGCGCAACTCGT
GTTGTTCTCATCCGCGATCACCTGCAGCTATGCCTTGGCGGCAGCCTATTCCTGGCGAGAGACGGCTTGAGCACGGGCGG
CCTCGTAGATCACATTCTTCTCCGTGGCGAAGTTGGGGTTC------TT---------------CGTG---------GCC
AT--GACCTCCT-CCCTCGCGTGCTCGCCGTCGATTAGGCCCTCTGGCAGCCGGTGCTGCTCGAGGAGCAACAAGTTGTA
CCGTTGTTCCTCATGCGCCTCCTCGAACACCAACACAGGCGCCAGCGCGGGCTGCTCCTCCACCATGGTGGTGTTGAAGT
GTGCCTACGCCTGCTCCATGGTGAAGCCGGCATGCACATGC---GCA--TGGTCCGGTGCGGTGTCGTCGGAACCCGTTT
CCACC----GTGGGGTCATCCTCGTCGTCGGAGACCTCAGTCAAGCTGGTCGGCATG-----------------------
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>chr1A_219
--------------------------------------------------------------------------------
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--------------------------------------------------------------GACATGAGGTCCACGATG
GAAATGGAGGCATCGACGCTCTCATTGTCCCATTGGGATGCTCGAAAGACCGCGGGCGGCCCGTAGGACGCGCATCTGGC
GTTATTCTCATCCGCGATCGCCTACAACCATGCCTCTGCGGCGGCCTGTTCCTGGTGAGCAGTGGCTTAAGCACGGGCGG
CCTCGTAGAGTGCATGCTGCTCCACGACAAAGTTGAGTATC------GT---------------C---------------
GC--GGCCTCCT-GGCTTGCGCGTTCGCCGTTGATTTGGCCCTCTGCCAACCGGAGCTGCTTTAGGAGGAACATCTTGTA
GCGATGTTCCTCCTGCGCATGCTAGAACACCGACATAGGTGCTGATGCCTGCTGCTTCTCCGCCATGGCGGCGTTGAAGT
GTGTCTGCGTCTGCTCCATGGTGAAGCCAGCATGCACGAGT---GTG--GCCTCCGTTGCGGTGTTGTCGGACCCCGTCT
CCATC----GTGGGGTCGTCCTCGTCGTCCGTGACCTCAGAGGAGGTGGTCCGCATG-----------------------
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>chr3B_1172
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---------------------------------------------------------------GTGAACTTTGTACTAGT
ACAGGTTGGGACTGACTTGGCGGCCTTTGCTTGCCACGCAAAGAACGGCG--------------------------CGCG
CGGATCCAGACGCGAGACCAGGACATGGGGGCCCCGGCCCCGCAGGCTAACTGCTTACCCAGCAGCAGCAGCCACCACGG
CCACACACACACCCGCGCCCGCCGCTCCCCAGAAACAAGT-----------ACAGCCAGCGTTCACTG-------TGCTG
CTCAGCTGCCG-----GCTCTCCGCTCCCGAGGAACGCGCCAGGCGCCGGCGCCACGATGGAA---GCCGCGGCGGCCGC
GGCGTGCCGAGGAGGCGTGGTGCTCGCACGGGCACGCCCTGGTCACCCGGCGCGGCGCCACGGCGTAGGCGCGGGAGCCG
GACCCGCCGCCCGGCGGAGGTTCCTCGTCGTGGCGTCGCTCGGAGAAGCCCCCTCCGCGCCCTCGCGCAGCGCCGTGGCG
GTCGCGCAGGAGGTAATTTGCTCTGAGATTCTGGTGCCAGTGCCTCACTGGCTCTGCTCTGCTCTGCTCCCGCGCAATCA
CGTCAGCTCTCCT-----CACATACGAAATCTGTCGGTTCGGCGCAGATCGCGCAGGCTGCCTATGAGGACGACGTCGCC
TCCGTCAGAGTTGTACTGATGATGGCCTTCGGCCCAGCCTCGACCGCAGTCCTGCCGCCCCCCGACGGTGAGCTCCACTT
TCACTCGTGCGTACGGGAACATGCCACAAAAATCTGGTGCGATTTTTTTTTTTTTTTGAGGAATCCGGCCAAGGTATTTT
GACTG-C---TGCCTACCCTCGCCAGATCATGTGAATACGGTGAGCGTCACGTTCGTGCTGGAGAAGAAGTGCGCGTTCG
GCCAGCGGTTCCTCGTCGTCGGCGACGACCCGGCGCTCGGCCTCTGGGACCCGGCCAAGGCGACCGCTCTGGACTGGTCG
GAAGGCCACGTCTGGACGGCGACGACGGTAATCTCCCCTCCCA-----AGTCCCAACCAGTCACTCACATTCTTTCACTC
TCACCATCGTTGGTCTGGGCTAGGATCTGCCAGCGAACAGGTTGGTCGAGTTCAAGTTCTTGCTGCAAGACCCCTCCGGC
CATGTCCGCTGGCAGCACGGCGGCAACAGGGCTCTGCAGATAACCGAGGCCTCCAACGCGTTGGTCGTGTACGAAGACTG
GGACGACGCCGGGTGCCAGGAAGTGTCGGAGGCGGCATTACATCTGCCGATCGGAGCGGAGGAGACCGACG---TGCTGC
TGGCAGATGATGGCCGGACCGA---CGA---CGATCAGGAGACCTACGAGGGCTTCATGCATGCCGAGGAGTCACCTGCG
GCTGTAGGAGCTTCTCTGGACGCGGAAACGATGTGGGTACATGGAGCGAACCGGACACAGGTGAAATGGATTCCCCCA-C
TCTCATTTCGTTG----ATATATGACCATAAGACTGCTTCATCCTAGCTGCAG---------------------------
----------------------TTTACCTTGCAGAAAGACGAGAAGATCCCGGAGGAGCTTCGCAGAAGAGCAAACATGG
CAGCAGCACAAAACGGCAGCCTTGCTTCTGCGGGAATAAACGGCGACGACATCATCTTGTACAAGGAAGCTGCGAATACG
CCGGCCAGGATGTTCGAAAATGACATGGTCTGGATGAGGAAAGCCCTCCAGGGGTTGCTCCGGAACCTTGGTTTCCACAT
CGGCACAACAAAAACATGAAAAATAAGCATCCTGTGTACGTACGGTACA------------------------------G
ATCATATAATGTTTCTTACTCCTAGTTGAGAACCATTTTTCCTTTTCACGATGCATGCAACCCCGGAGGAATGAGATTGC
CGGGAGCTGCAACGCAAACAGTCGCTGCACCTGCACACTGTTGCCGGTAGGAACTCCTCCGATGGAAGCTGTTAATATTG
TTATCAGTGGTTTCGACTTCTTATCTATTACTCCCTCCCTCCATCCCTCCCAAAATTTAAGACTTTTTTGACACTAGTAC
TTATTTCAAACAAGGAGCAGACTCCGGTTGCTATTCCGTGATGAGTATAGCTAGAAGTTATACTGATTGC--AAAATTGC
GGCATATATA-----------------TAAAACAGAACAAGGGCGATTTCGTAGGCGGACAATCATGGTCTAGCAACATG
TACTCGTGTCTATCTGTGTAAGGGCGTGAACAATGGTTGGTAAAATAGTAATAGGTATTATCTTACATCCGTCACGTAAT
ATATATGGCAGTGAAAAATGTTGTACAATGAATTATCTATGTCTTATTATTAATAAC----TATAACTAGATATGAATAC
CAATCACCTACGGTTTGATGGTTACGAGGGTGGTTGTACGCCGACTCATCAAGGATCTTGTCACA-------------TG
TATCTCGTAAAGACCAAATATTGTTTCAAATC-TATGACGATGACTTCATTAATCTCAAGACTTGTCAACT---------
--------------------------------------------------------------------------------
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--------
>SNPs
-S---S------------------------------S-------------------------------------------
-----------S--S-----------------------------------------------------------------
-----------------------------------S--------------S-----------------------------
---------------------------------------------------S----------------------------
------------S-----------S--------------------------------------S----------------
----------------------S---------------------------------------------------------
-------------------------------------------------S---------------------S--------
--------S-----------S-----------------------------S-----------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------
---------------------------S-------------------------S----S--S------------------
------------S---------------------------------------------SSS-------S-----------
---------------------------------------------S--------------S-------------------
--------S-----------------------------------------------------------SSSSSSS-----
--------------------------------------------------------S-----------------------
------------------------------------S-----S-------------------------------------
--------S-------------------S----------S-------S--------------------------------
S-------------------------------S-----------------------------------------------
--S----------------------------------S----------------------------------S-------
------------------------------------------S-----------------S-----------------S-
S---------------------------S----------S----------------------------------------
-------SSS--------S-------S--------S--------------------------------------------
-------------S--------------------------------------------------S---------------
------------------------------------------S------------S------------------------
-----S--------------------------------------------------------------------------
-----------------------------------------------------S-S---SS-------------------
------------------------------------------S-------------------S-----------------
----------------------SSS--------------S-----------------------------------S----
--------------------------S---------S--S-S------------------------------------S-
--------------------------------------------------------------------------------
---------------------------------------S----S-----------S-----------------------
------------------------------------S-S------------------------------S----------
-----------------------------------------------------------------------S--------
---------------------------SSS-SSS----------------------------------------------
------------------------S-----------------------------S-------------------------
-S----------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
---------------------SS-SS-------------S------------------S-------S-SSSS--------
-----S-SSSSSSSSSSSSSSSSSSSS------------------------------S---------------S------
--------------SS---S--------S----------S----------------------S---S--S-----S----
----------S-----S---------------------S--------S----S----SSSS----S---S-------S--
-SS-SSSSS--SSS-SSS------S--------------S---SS--------SS--SSSSSSS-SSSSSSSSSSSSS--
-S---------SSSSS-----------SS---S----SS-S---------S---S--------S---S---SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS
>forward_1027
--------------------------------------------------------------------------------
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-----------------------------------------------ACGTGCTTGCATGTGAGAGA-------------
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>reverse_2600
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---------------------------------------CGACCTACGAGGGCTTCATG---------------------
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>forward_1171
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-------------------------------TGTAGACCACATGCATGCGT-----------------------------
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>reverse_2917
--------------------------------------------------------------------------------
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------------------------------------AAGACGGCGACGACATCATC------------------------
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>forward_2682
--------------------------------------------------------------------------------
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----------------------CGGACACGATGTGGCTAAAC--------------------------------------
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--------
>reverse_4063
--------------------------------------------------------------------------------
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--------------------------------------------------------------TCACCTCAACGTGACATT
CGT-----------------------------------------------------------------------------
--------
