>input_sequence_42062
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------ATGCAGATGGACTCCTACTACTTCCACGACGACGCCCACTTCTTCGCCG
GCTGCGGCGTCCCCGGCTCGCCGGACCTGCCCTTCGCCGACCTCATTGCGTCGCTGTCGGAGCCGCTGCCTGAGGTGGC-
--GAGCCAGAGCGCGTTCCGGGAGTACCGCGGCGTCGGGCTGGAGCTTCCGGGGACGGCGCGGGGAGGGACGGGGAACGG
GATCAACATCCACCGGAGGATGATGGGCGTGCTGGGCAGGATGGTGCCGGTCACCGAGGAGGAAGAGAGACCGCAGCAAC
AGCACCAGCAGCAGCAGCAGCAGGCGGCCGGCGCCGTCGAGAGCAGCCGCGGGTTCCGGCACATGATGCGCGAGCGCCAG
CGCCGCGAGAAGCTCAGCCAGAGCTACGCCGACCTCTACGCCATGGTCTCCTCCCGCTCCAAGGTATTACTTCGACCGTC
CGCGCCCGCTGTCC---CACATTCCATTTCGCTGGT-------------------------------GCTCGAATGCCAT
GTGCTGAGTGAACGA----GTGATGCCATTGCAGCAGGACAAGAACTCGATCGTGCAGTCCGCGGCCGTCTACATCCACG
AGCTCAAGGTCGCCAAGGAGCAGCTCCAGAGGAGGAACGACGAGCTCAAGGCCAAGATCCTGGGGCACGACGCGCAGCAG
CAGTGCGTCAAGGTGCAGTTCGAGGTCGACGAGCCCTCGTCCTCCGTCGACTCCATGATCGGGGCCCTCAGGCGCCTCAA
GAGCATGAATGTCAAGACCAGGGGGATCCACTCCACCTTGTCCGGCCAGCGGTTGACGACGGAGATGAATGTCGAAACCA
CGGTGAGCTAGCTTCATTTTTCTTACCTTAGTCCTCCTACCTGCTTTGTTGACAATAATAAGCCGGACTAAACT--AG--
--GTTAGAAAATACACAACAGTTGAGTCACCTACAAGATTTTTTTGGAATTTCCGTGTTGTTTTAGTACACTACTACATC
ATGGATATACATTACTAGTCATCACTAG-ACTGTTGGATAGGGACTGCATCATCGATACGATAACGATGAGGATTGTAAA
ATTGATTCAAGAAATGAAATGACCGCGATATGATTTTAGTCCTTAGTGTTTTCTTGAAATCTATACAAAACATCTTGGTG
GTGATAATTTTTGTTAAGCCATGTTACCATCAAAGTACACTAAATAATTTCTGAAAGGACATACTAATATACTATATATT
TCACTCGACCGTTTTAAACTTTTCATCCAAGCTCGAAACTCGGTCTTTTCCAATACAATACAAATACCAATAAAGTAAAA
GGT-AAATTGTGAACAAGGCAAATCACAAAATTTGACTATCGCTGAGGAATTGTGTC--AAAGTTGTGCTAGAAAACCTG
TGACTTCTGCTGAAGACATCATTTGAATTGAACATATCCTTTGCCCGGGCACATGTTATAAAATCTGCAGGGCCAATCCT
TGTCGAATTAATCCGCATCCGCTGTTACTGTCAAACTAAATAAATTCTGCAGCTACTGTTAGGTTAATTGTTTTCCCGCA
AGAATCGAAGAATTAATCATGCCCACTTTCAGTAGTAATCACCAAATGAAGCAAGTCAACGGATCCCCAATCTGAATAAT
GCAGTGTCAAGCTTAACATTTACTCAAGGTTCAATGCATGATTGATCAGTCTGATGTTA---TATATAAGTAAGCCACTT
GTACACTCTTAACTAACCACGCCGCTTTCCTCACGTGTCCTATTCACAGATTGCGGCCTGCGAGGTAGAAAATGCAGTGG
AGGAGGCTCTCCAGGAAGTAGAGAGGAATCAGCTGCCTGACAGCGAGGCCCCGTTTCCCGGAAGCAGGAGCGCCTGGCCT
CAAACATCACACGTGCAAAATGTGTTCTGA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr5D_1_TraesCS5D01G390700
GTTGGACTACAATAACCTCGTTTGCTCAATCCTCTTTTGGCTATTTTAGTA---GTATTTGCTTAGCCCTTATTGCCCAC
TTTTGTATCTAATTTTATATGGTAAGTTATGAGATAATCATAGCGCAACATTGTTCATGAACCGGAAATCGGTCCAGTGT
TGTTATATGGGATGGTAGCAGTTTTGCCCAAAAAAATCTCGAACTCCTGAGGGGTAGGATGGGCGAAGGAAGTTTTAAAA
CCCATGGGCGGCGCTTTCAATTTATATTCAGTGTAAG-AAAGTTCAAGAACGGCGAAAATCTTGATTTTTTGGTTAGGCA
CTGGCTTATACGCAA--------GGAAAGCCAAAGCCAAACACCCAGTGAGTATAAATTTCACGAAATTATAGAGGTCAA
CATAGGTTTATACGTTTGTTTCTAAAAAAAAGAGAGCTACTTTTGCTAAAG-----AAAAAGGAAATAAAACGCGGTGCT
GTTTGGGACGGGAGAAGTTAAGACGGACGCTCGCTGTGA---AAAAAAGAAGTTCGGATAAATCGGCATGCCAAGGAACG
AAGTGGACGTCCCGGCGG------------------------CCGCGAGAGCGAGTTGCGCACACTTGTCAGCCGGGCTC
CCGCGTGGAACCTTCTGCGGCTGC---------CTCTGCCTACGTGTGCGACGCCATCGCCCCAATCGCGTACCGCGTTG
CCGTGAGTAGGCCCATCACTACCTCGTGCTCATTCCG------------GGCCGAGCTCGCAATAAATGGGAAAAATAT-
ATTCGCCCCGGCTTTGACCGTCTCGCCTCTTTTAGCTCTCTCCGCC--TCTCTCAGACCGTACGGGTCCATTTGACCACG
TGACCCAAATCCGCCACCTGGGCCCCATTCCCCCCTCCTCCTCCCCCGCCGCGGCTATATAACCGCGTCCGGACATTTTC
CCGGCAAACACTTCTTCACCTTCACCAAGCAAAG---CACACAGCACCCAGCAGCAACTCGTCGACGCAGAGCGGAGGAG
CGAAGGAGGCCGGCCGGCGAGATCGACGCAAATGCAGATGGACTCCTACTACTTCCACGACGACGCCCACTTCTTCGCCG
GCTGCGGCGTCCCCGGCTCGCCGGACCTGCCCTTCGCCGACCTCATTGCGTCGCTGTCGGAGCCGCTGCCTGAGGTGGC-
--GAGCCAGAGCGCGTTCCGGGAGTACCGCGGCGTCGGGCTGGAGCTTCCGGGGACGGCGCGGGGAGGGACGGGGAACGG
GATCAACATCCACCGGAGGATGATGGGCGTGCTGGGCAGGATGGTGCCGGTCACCGAGGAGGAAGAGAGACCGCAGCAAC
AGCACCAGCAGCAGCAGCAGCAGGCGGCCGGCGCCGTCGAGAGCAGCCGCGGGTTCCGGCACATGATGCGCGAGCGCCAG
CGCCGCGAGAAGCTCAGCCAGAGCTACGCCGACCTCTACGCCATGGTCTCCTCCCGCTCCAAGGTATTACTTCGACCGTC
CGCGCCCGCTGTCC---CACATTCCATTTCGCTGGT-------------------------------GCTCGAATGCCAT
GTGCTGAGTGAACGA----GTGATGCCATTGCAGCAGGACAAGAACTCGATCGTGCAGTCCGCGGCCGTCTACATCCACG
AGCTCAAGGTCGCCAAGGAGCAGCTCCAGAGGAGGAACGACGAGCTCAAGGCCAAGATCCTGGGGCACGACGCGCAGCAG
CAGTGCGTCAAGGTGCAGTTCGAGGTCGACGAGCCCTCGTCCTCCGTCGACTCCATGATCGGGGCCCTCAGGCGCCTCAA
GAGCATGAATGTCAAGACCAGGGGGATCCACTCCACCTTGTCCGGCCAGCGGTTGACGACGGAGATGAATGTCGAAACCA
CGGTGAGCTAGCTTCATTTTTCTTACCTTAGTCCTCCTACCTGCTTTGTTGACAATAATAAGCCGGACTAAACT--AG--
--GTTAGAAAATACACAACAGTTGAGTCACCTACAAGATTTTTTTGGAATTTCCGTGTTGTTTTAGTACACTACTACATC
ATGGATATACATTACTAGTCATCACTAG-ACTGTTGGATAGGGACTGCATCATCGATACGATAACGATGAGGATTGTAAA
ATTGATTCAAGAAATGAAATGACCGCGATATGATTTTAGTCCTTAGTGTTTTCTTGAAATCTATACAAAACATCTTGGTG
GTGATAATTTTTGTTAAGCCATGTTACCATCAAAGTACACTAAATAATTTCTGAAAGGACATACTAATATACTATATATT
TCACTCGACCGTTTTAAACTTTTCATCCAAGCTCGAAACTCGGTCTTTTCCAATACAATACAAATACCAATAAAGTAAAA
GGT-AAATTGTGAACAAGGCAAATCACAAAATTTGACTATCGCTGAGGAATTGTGTC--AAAGTTGTGCTAGAAAACCTG
TGACTTCTGCTGAAGACATCATTTGAATTGAACATATCCTTTGCCCGGGCACATGTTATAAAATCTGCAGGGCCAATCCT
TGTCGAATTAATCCGCATCCGCTGTTACTGTCAAACTAAATAAATTCTGCAGCTACTGTTAGGTTAATTGTTTTCCCGCA
AGAATCGAAGAATTAATCATGCCCACTTTCAGTAGTAATCACCAAATGAAGCAAGTCAACGGATCCCCAATCTGAATAAT
GCAGTGTCAAGCTTAACATTTACTCAAGGTTCAATGCATGATTGATCAGTCTGATGTTA---TATATAAGTAAGCCACTT
GTACACTCTTAACTAACCACGCCGCTTTCCTCACGTGTCCTATTCACAGATTGCGGCCTGCGAGGTAGAAAATGCAGTGG
AGGAGGCTCTCCAGGAAGTAGAGAGGAATCAGCTGCCTGACAGCGAGGCCCCGTTTCCCGGAAGCAGGAGCGCCTGGCCT
CAAACATCACACGTGCAAAATGTGTTCTGAGATGGTTCTGAGCACGAGGGCCATGAGACCCATTTGTTCATTGTTCTTTC
TTCTCTCTTTTTTTCTCCTTTATTTCGATGATGGAGGGCAAATTTGACAAATTTAACCTATAGACAAAATCAAATCACAG
AATGAACTGTCCGTGAAACTATTTCACGCGGCTGACCAGTGGCGCCTAACTCTCATGCGCCGCACTAGTGCAACGCCTGG
GAGCTAGGCGCTGCACTAGGCAACGCCTAGGAGCTAGGCTGCACACTGACTTAGTAATTTTCTGATCACACGGGTGCGAC
GCTGGCCGTGTAGCGCCTATCTGTGAGGCGTTGCACAGTGTAGTGTGGCGCCTTCGTGTCGGGCGTCACACAAAAAGGTC
AGCCGCGTGAAATAGTTTCACGGATAGTTTATTCTGTGATTTGATTTCGTCTATAGGTCAAATTTGTCAAATTTGCCATG
ATGGAGCAAGTGAAGATCTCCACATGCCCTTGCCCGCGTGCGTACGTGGTGGTTGTACGTACTCTCGACCCTCGTGTG-T
GGTCCTAGTGGTTTGTTC--GGGGCTGTGAAGATGTAAGTAGCTCTTCAGATTTGTAGGTAGTGAGGTCAACTTGGGATC
AAATGTGTTGGGA-AAATTTGAAGGGGGTCAACTTGCACAGTTTGGCCTGGCGCTTACGTTTGGCCCTAGCAAGGAAGAG
AAAATGATATGACAACTTGACAAGGATTACCAAACGTTTGGAAGAAGAGGGACCAGCAAGCCTTTGTTGGTTGCTGACAC
TGTAAATTTGCAACCACCCAATGTTCGAAATCGAGTATATATTTTTCTCC-AAACAGGATCATTGTGTTTCGAGCAACCT
TTTCACTAAAATGATAAAATGTCATTGAGATCTGTTATAGTTGTTATAAACTACATTCAAACTTTCTCGTGTTTGTAACC
TGGGAACATTGCAAGGAGCTCAACTATTCTCGTGTTTGTAAC-CTGACAACATTGTAAGGAGCTCAACGCGAGAGT
>chr5B_3
--TGGACTACAATAACCCCGTTTGCTCAATCCTCTTCTGGCTATTTTTAGTACTGTATTTGCTTAGCGCTTATTGCCCAC
TTTTGTATCTGATTTTATATGGTAGGTTATGAGATACTCATAGTGCAACATTGTTCATGAACCGAAAATCGGTCCAGTGT
TGTTATATGGGATGGTAG----TTTCCCCAAAAAAATCTCGAACTCCTGAGGA-TAGGTTGGGCGAAGGAAGTTTTAAAA
CCCATGTGCGGCGCTTTCAATTTATATTCAGTGTAAAAAAAGTTCAAGAACGGTGAAAATCTTGATATCAAAATAGGCGC
ATACGTCTGTTTCTTAAACACAGGGAAAGACAAAGCCAAACACCCCATGAGTATAGATTTCACGGAATTATAGATATCAA
AATAGGCGCATACGTCTGTTTCTT-AAAAAAAAAAGCTGCTTTTGCTAAAGAAATCAAAAAGGAAATAAAACGCGGTGCT
GTTTGGGACGGAAGAAGTTAAGACGAACGCTCGCTCGCTGTGAAAAAAGAAGTTGGGATAAATCGGCATGCCAACGAACG
AGGTTGACGTCCCGGCGGTTGCCAGCCGCAAGCGAAGTGCTACCGCGAGAGCGAGCTGCGCACT-TTGTCAGCCGGGCTC
CCGCGTGGAACCTTCTGCGTTTGCCTT---------TGCCTAAGTGTGCGACGCCATCGCCCCAATCGCGTACCGCGTTG
CCGCGAGTAGGCCCATCACTACCTCGTGCTCATTCCGACTCGCGCCCCTGGCCGAGCTCACAATAAACGAGAAAAAAATA
ATTCGTCCCGGCTTTGACCGTCTCGCCTCTTTTAGCCCTCTCCGCCTCTCTCTCAGACCGTACGGGTCCATTTGACCACG
TGACCCAAATCCGCCACTTGGGCCCCATGGCTCCCTCTCCCCCTCCCGCCGCGGCTATATAACCGCGTCCGGACATTTTC
CCGACAAACA---CTTCACCTTCACCAAGCAAGCACACACACAGCGCCCAGCAGCGACTCATCGACGCAGAGCAGAGGAG
CGAAGGAGGCCGGCCGGCGGGATCGACGCAAATGCAGATGGACTCCTACTACTTCCACGACGACGCCCACCTCTTCGCCG
GCTGCGGCGTCCCCGGCTCGCCGGACCTGCCCTTCGCCGACCTCATTGCGTCGCTCTCGGAGCCGCTGCCTGCGGTGGTA
GAGAGCCAGAGCGCGTTCCGGGAGTACCGCGGCGTCGGCCTGGAGCTTCCGGGGACGGCCCGGGGAGGAACCGGGAACGG
GATCAACATCCACCGGAGGATGATGGGCGTGCTGGGCAGGATGGGGCCGGCCGCTGAGGAGGAGGAGCGGCCGCAGCAC-
-----------CAGCAGCAGCAGGCGGCCGGCGCCGTCGAGAGCAGCCGCGGGTTCCGGCACATGATGCGCGAGCGCCAG
CGCCGCGAGAAGCTCAGCCAGAGCTACGCCGACCTCTACGCCATGGTCTCCTCCCGCTCCAAGG---TACCCAACATT--
----------------CCACATTCCATCTCACTGAATGATCGATTCCCTGTGCTGAATTCGGCAAGCGCTCGAATGCCAC
GTGCTGAACGAATGAATGGGTGATGCCATTGCAGCAGGACAAGAACTCGATCGTGCAGTCCGCGGCCGTCTACATCCACG
AGCTCAAGGTCGCCAAGGAGCAGCTCCAGAGGAGGAACGACGAGCTCAAGGCCAAGATCCTGGGGCACGACGAGCAGCAG
CAGTGCGTCAAGGTCCAGTTCGAGGTGGACGAGCCCTCGTCCTCCGTCGACTCCATGATCGGGGCCCTCACGCGCCTCAA
GAGCATGAATGTCAAGACCAGGGGGATCCACTCCATCTTGTCCGGCCAGCGGTTGACGACGGAGATGAATGTCGAAACCA
CGGTGAGCTAGCTTCATTTTTCTTACCTTAGTCCTCCTACCTGCTTTGTTGACAATAATAAACCCGACTAAACTTCAG--
--GTTAGAAAATACACAACAGTTGAGTCACCCACAAGATTTTTTCGGAATTTCCGTGTTCTTTTAGTACACTACTACATC
ATCGATATCCATTACTAGTACATCATTGCGCTGTTCGATAGGGACTGCATCATCGATAGGATAACGACGAGGATTCTAAA
ATTAGTTCTAGAAATGA-----CTGCAATATGTTTTAAATCTTGTGTTTTTGTTGAAAGC---TACAAAACATCTTGGTT
GTGAGAATCCGGATTAAGCCATGTGAGGATCAAAGTATACTATAAAATTGCTGAAGGGACATATTAAT------------
TCATTCGGCCGTTTAC-ACTTTTCATCAAAATTTGACACTCGGTCTTTTCTAATACA-----AATCACGAGAAAGCACAG
CTT-AAAATTTGAGCAAGACAAATAA-AAAATTTGACTATCGCCGAGGAATCTGTGTCAAAAGTTGTGTTAGAAACCCTC
TGACTGATG---AAGACATCATTT-----GAACATATCCTTTGCCAGTTTACATGTTATAAAATCTGCAGGGCCAATCCT
TGTCGAATTAATCCGCATCCGCTGTTACTGTCAAACAAAATAAATTCTGCAGCTACTGTTAGGTCAATT--TTTTCCGCA
AGAATCGAACAAT----CTTGCCCTTTTTAAGAACTACACCA-AAATGAATCAAGTCAACGGATCCCCAATCTGAATAAT
GCGGTGTCAAGCTTAACATTTACTCAAGGTTCAATGCATGATTGATCAGTATCATATTA---TATAT-AGTAAGCCGCTT
GTACACTCTTAACTAACCATGCTGCTTTCCTCACGTGTCCTATTCACAGATTGCGGCCTGCGAGGTAGAAAAGGCAGTGG
AGGAGGCTCTCCAGGAAGTAGAGAGGAATCAGCTGCCTGACAGCGAGGCCCCGTTTCCCGGAAGCAGGAGCGCCTGGCCT
CAAACATCACACGTGCAAAATGTGTTCTGAGAGGTTTCTAACCACAAGAGTCATGAGACCCATCTGTTCATTGTTTTTTC
TCCTCTCTTTTTTTCTTG--TTCTTCTG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ATG
ATGGAGCAAATGAATACCTCCACCAGCTTATT--------------------------GTGCTCTCGACCCTCGTGTCTT
GGTCCTGGTGGTCTTTTTTAGAGGCTGTGAAGATGTAAGTAGCTCCTCAGATGTGTAGCTAGTGAGGTCAACTTGGAATC
AAATGGGTTGGAG-AAATTTGAAGGGGGTCTACTCGCACTGTTTGGCCTGGCGCTTACGTGTGGCCGTAGCAAGGAAGAG
AAAAGGATCTGACAAGTTGAGAAGGATTGTCAAACGTTTGGAAGAAGAGGGACCAGCAAGCC----TTGGCTGCTGAGAC
TGTAAATTTGCAACCACCCAATGTTCGAAATCGAGTATATATTTTTCCTCTAAACAGGATCGTTGTGTTTCGAGCAACCT
TTTCACTAAAATC--------TCATTGAAATTTGTTATAGTTGTTATAAACTACATTTAAACTTTCTCGTGTTTGTAACC
TAGGAGCATTGCAAGGAGCTCAACTATTCTCGTGTTTTT-AC-CTGACAACATTGTAAGGAGCTCAACGCGAGA--
>chr5A_476
--------------------------------------------------------------------------------
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------------AGAAGTTGAGGCGAACGCTCGCTGT-----AAAAAAGAAGTTTGGATAAATCGGCATGCCAAGGAATG
AAGTGGACGTCCCGGCGGTTGCCAACCGCGAGTGAAGAAGTGCT-------------------ACTTGTCAGTCGGGCTC
CCGCGTGGAACCTTCTCCCCCCGGCTGCCCCCACTCTGCCTACGTGTGCGACGCCATCGCCCCGATCGCGTACCGCGTTG
CCGCGAGTAGGCCCATCACTACCTCGTGCTCATTCCG------------GGCCGGGCTCGCAATAAATGGAAAAAATAT-
ATTCGCCCCGGCTTTGACCGTCTCGCCCCTTTTAGCTCCCCTCGC----CTATCAGACCGTACGGGTCCATTTGACCACG
TGACCCAAATCCGCCACTTGGGCCCCA----------TCCCCCTCCCGCCGCGGCTATATAACCGCGTCCGGACATTTTC
CCGACAAACA---CTTCACCTTCACCAAGCACGCACACAGCGCCCAG-CAGCAGCAACTCATCGACGCAGAGCAGAGCAG
CGAAGGG----GGCCGGCGAGATCGACGCAAATGCAGATGGACTCCTACTACTTCCACGACGACGCCCACTTCTTCGCCG
GCTGCGGCGTCCCCGGCTCGCCGGACCTGCCCTTCGCCGACCTCATTGCGTCGCTCTCGGAGCCGCTGCCTGAGGTGGC-
--CAGACAGAGCGCGTTCCGGGAGTACCGCGGCGTCGGGCTGGAGCTTCCGGGCACGGCGCGGGGCGGGACGGGGAACGG
GATCAACATCCACCGGAGGATGATGGACGTGCTGGGCAGGATGGGGCCGGCCACCGAGGAGGAGCAGCGGCCGCAGCAC-
-----------CAACAGCAGCAGGCGGCCGGCGCTGTCGAGAGCAGCCGCGGGTTCCGGCACATGATGCGCGAGCGCCAG
CGCCGCGAGAAGCTCAGCCAGAGCTACGCCGACCTCCACGCCATGGTCTCCTCCCGTTCCAAGG---TACTTCGACCGTC
CGCGCCCGCTGTCCTCCCACATTCCATTTCACTGGT-------------------------------GCTCGAATGCCAT
GTGCTGAATGAACGA----GTGATGCCATTGCAGCAGGACAAGAACTCGATCGTGCAGTCCGCGGCCGTCTACATCCACG
AGCTCAAGGTCGCCAAGGAGCAGCTCCAGAGGAGGAACGACGAGCTCAAGGCCAAGATCCTGGGGCACGACGCGCAGCAG
CAGTGCGTCAAGGTCCAGTTCGAGGTGGACGAGCCCTCGTCCTCCATCGACTCCATGATCGGGGCCCTCACGCGCCTCAA
GAGCATGAACGTCAAGACCAGGGGGATCCACTCCATCTTGTCCGGCCAGCGGTTGACGACGGAGATGAATGTCGAAACCA
CGGTGAGCTAGCTTCATTTTTCTTACCTTAGTCCTCCTACCTGCTTTGTTGACAATAATAAACCGGACTAAACTTTTAAG
AAGTTGGAAAAGATACAACAGTTGAGTCACCTGCAAGATTTTTTCGGAATTTCCGTGTTGTTTTAGTACACTACTACATC
AACGATATACATTACCAGTACGTCATTGCACTGTTGGATAGGGACTGCATCATCGATACGATAACGATGAGGATTGTAAA
ATTGATTCAAGAAATGA-----CTGCAATATGTTTTAAATCCTGTGGTTTTATCGAAAGC---TACAAAACATCTTGGTT
GTGAGAATCCGGATTAAGCCATGTGAGGATCAAAGTATACCATAAAATTGCTGAAAGGGCATATTAAT------------
TCATTCCACCGTTTAC-TCTTTTCATAAAAGTTTGAAACTCGGTCTTTTCTAATACA-----CATCACGAGAAAGCACAG
CTTAAAATTTTGAGTAAGACAAATAA-AAAATTTGACTATCGTCGAGGAATCTGTGTCAAAAGTTGTGCTAGAAACCCTC
TGACTTCTG---AAGACATCATTA-----GAACATATCCTTTGCCAGGTCCCATGTTATAAAATCTGCGGGGCCAATCCT
TGTCTAATTAATCTGCATCCGCTGTTACTGTCAGACTAAATAAATTCTGCAGCTACTATTAGGTCAATT--CTTTTCGCA
AGAATCGAACAAT----CATGCCCTTTTTAAGTAGTAATCAGCAAATGAATCAAGTCAACGGATCCCCAATCTGAATAAT
GCAGTGTCGAGCTTAACATTTACTCAAGGTTCAATGCATGATTGATCAGTCTGATGTTATACTATAT-AGTAAGCCACTT
GTACACTCTTAACTAACCACGCTGCTTTCCTCACGTGTCATATTCACAGATTGCGGCTTGCGAGGTAGAAAAGGCAGTGG
AGGAGGCTCTCCAGGAAGTAGAGAGGAATCAGCTGCCTGACAGCGAGGCCCCGTTTCCCGGAAGCAGGAGCGCCTGGCCT
CAAACATCACACGTGCAAAATGTGTTCTGATCGGTTTCTGACCACAAGGGTCATGAGACCCATCTGTTCATTGTTTTTTC
TCCTCTTTTTTTCTCTCCTTTTTTTCTG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ATG
ATGGAGCAAGTGAAGATCTTCACATGCCCTTGCCTGCGTAC-----TGGTGGTTGTACTCTCGATCGACCCTCGTGTT-T
AGTCCTAGTGGGATTTTTTAGGGGCTGTGAAGGTGTAAGTAGCTCTTCAGATGTGTAGGTGGTGAGGTCAACTTGGAATC
AAATGGGTTGGAAAAAAATTGAAGAGGATCTACTCGCACGGTTTGGCCTGGCGCTTACGTTTGGCCCTAGCAAGGAAGAG
AAAAGGATATGACAACTTGACAAGGATTACCAAACGTTTGGAAGAAGACGGGCCAGCAAGCC----TTGGTTGCTGAGAC
TGTAAATTTGCATCCACCCAATGTTCGAAATCGAGTATATATTTTTCTCC-AAACAGGATCGTTGTGTTTCGAGCAACCT
TTTCACTAAAATC--------TCACTGAAATTTGTTATAGTTGTTGTAAACTGCATTCAAACTTTCTCGTGTTTGTAACC
TGGGAACATTGCAAGGAACTCAACTATTCTCGTGTTTGT-AATCTGACAACATTGTAAGGAGCTCAACGCGAGAGT
>SNPs
SS---------------S------------------S----------SSSS----------------S------------
----------S-------------S-----------S------S--------------------S---------------
------------------SSSS---S--------------------------SS----S---------------------
------S-----------------------------S----------------S------------S-SSSSS-SS-SSS
S-SSS-SSSSSS-SS--------------S---------------SS--------S--------S---------SS----
S-----SSS------S-------SS------S-S----S-----------------------------------------
-----------S-------------S-----------SS---------------S-------------------------
-------------------------------------------------------S------------------------
-------------------S------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S----------SS-S-----SS--S-S------------------------------------
---S------SSS-------------------SS--------------------------S------------S------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----S------------S---S-S--------SS
SSSSSSSSSSS---------------------------------------------------------------------
----------------------------------------------------------------SSS-------------
------------------------------S-------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------S-------------------------------------------S---------
-----------------------------------S--------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------S-----------------------------------
--S----------------SSSSSS-S-----------------------------------------------------
-----------------SSSSS-S--S-----S---S-S----SS--S---SS-SS--SSSSS----------------S
----S---SSSSS-----------S-SS---------S----S-S----S-------------S----SSSSSSSSSSSS
---S----------SSS----------S---S-S----------------S------SSSSS---SS-S-S----S-S-S
SS-------S---S----S-----S-S----------------S-------SSSSSS------------------S---S
---------SSS------------SSSSS----------------S--S-------------------------------
----------------------------------------------------------------S----SS---S-----
---------S---SSSS-------SS---S-----------S--------S-----------------------------
-------------------------------------------------------------------S------------
----------------------S-------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------S-S------S---S----S------------S-----------S----
-S-------------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
----------------------------------S----S-SSSSS--------------S----------------S--
------------S-S--S----------------------------------S-----------------------S---
-----S-----S------------------S---S----S----------------------------------------
----S---------------------------------------------------------SSSS-----------S--
-------------------------------------------------------------S------------------
------------SSSSSSSSS-------S--S------------------------------------------------
---------------------------------------S------------------------------------
>forward_219
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CGAACTCCTGAGGGGTAGGA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>reverse_1505
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TATTACTTCGACCGTC
CGCG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_335
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------AGGCA
CTGGCTTATACGCAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_1831
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GGCGCCTCAA
GAGCATGAAT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_1787
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TCAAGGTGCAGTTCGAGGTC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_3341
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------GGGCGTCACACAAAAAGGTC
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
