>input_sequence_42047
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----------------------------------------------------------------------ATGGCGATCG
GCGGCGTTGGCGCTGGGGGCGGGGCTGGGGGCGCCGAGGCGCAGGGGAGGAGCGTGCTGGTGACGGGCGGCGCGGGGTTC
ATCGGCACCCACACCGTGCTGCAGCTGCTGGAGAAGGGCTACGCCGTCACCGTGGTGGATAACTTCCACAACTCCGTCCC
CGAGGCGCTCGACCGCGTCCGCCACATCGTCGGCCCCGCCCTCTCCGCCCGCCTCCAATTCATCTTCGTACGTATACTCC
TACCTGCCTGCGCCCACCGTCT--------AGTTTGTTCGATCCTGCTCTCGATGATCTCGTGCCTGCCGTGCCTGGCAG
AGCTCAGTACCCTGATTGATTGATAGATTGGTTCGGTGAATTTCAGGGGGACCTGACGATCAAGGATGACCTCGAGAAGG
TGTTCGCCGCCAAGAGGTAGGACGTAGTTGTTG----GATCCATCAATCGATCAGGAGCTTTGATTTGATCTTCCAAACT
CGTGGCGATCGATCAAATTAATTAACCGTTTTGCCGTGTGACTCTGACTGATGACCAGGTACGACGCCGTGATACACTTC
GCCGGGCTGAAGGCGGTGGCGGAGAGCGTGGCGCACCCGGAGATGTACAACCGCAACAACATCGTCGGCACCGTCAACCT
ATACGACGTCATGAAGAAGCACGGATGCAACAAGGTACTCCCTCCCCATAAAACCCCAATCCCGTCAGTACTGTCCCCTG
CTCTTCAG----AGATGATGGATGATCTTCAGTGATTGCTCTGACACTTTCGAGAACCTACGTG-CCAGTTGGTGTTCTC
GTCGTCGGCGACCGTGTACGGCCAGCCGGAGAAGGTGCCCTGCTTCGAGGACTCCCCCCTCAAGGCCCTCAACCCGTACG
GCAGGACCAAGGTAAACTCTCTG------CATACACTCTGTCAGAAACGATTGCCTGA--CACTCACGTTGCCGAAGTCG
ACAGCGATGGCCATCGGAGTGATCGGCAATTAATCTAACCTTTTCGAC----------TCTAATGGCGTCGATGTGGTTG
ACGCAGCTGTACCTGGAGGAGATGCTGCGCGACTACCAGCACGCGAACCCGGAGTGGAGGACGATCCTGCTGCGCTACTT
CAACCCCATCGGCGCCCACGAGAGCGGCGACATCGGGGAGGACCCCAAGGGCGTCCCCAACAACCTGCTCCCCTACATCC
AGCAGGTGGCCGTCGGCCGCCGCCCCGAGCTCAACGTCTACGGCCACGACTACCGCACCCGGGACGGCACCGCCGTCAGG
GACTACATCCACGTGGTCGACCTCGCCGACGGCCACATCGCGGCGCTCGAGAAGCTCTTCGCCACCCCTGACATCGGTGC
GTCCGTCCGCCGGCCCAGTTAACAACCAACCCATTTACCAGTGCGTGCATCACTC---GACCATTTCTG----ATTTGTC
AGGCTGTGTGGCGTACAACCTGGGGACGGGGCGCGGGACGACGGTGCTGGAGATGGTGAGCGCGTTCGAGAAGGCATACG
GCAAGGTTGATACCATCTTCTTTGCCCTTGATATTTCGCCTGTCGATTTCGATTGGGAAAGGGATTGAGACTGACGTTTC
TGGCTGCAGAAAATCCCGGTGAAGATGTGCCCCAGGAGGCCGGGCGATTCGGAGCAGGTGTACGCGTCCACCGCCAAGGC
CGAAGAGGAGCTCGGCTGGAGGTAACCGATCGATGTCCATTAACACTACTAGTCGCAA-TGTAGTTTGTCGAGAGAGATG
GATTAAATCTC----------GCACTCACTGGTGTGCCGCTTTGCT---TTGCAGGGCCAAGTACGGGATCGAGGAGATG
TGCAGGGACCAGTGGAACTGGGCCAAGAAGAACCCCTATGGCTACTGCGGAAACGCTG---AAAACAAAGACTGA-----
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------------------------------------------------------------------------
>chr5B_1_TraesCS5B01G315700
ACACTGGATTCCTCCTCTCCACGGCCGTTATCGTCGTCTCGGGAGAG----CTGCCGCCTCATCAATCCAACAAT---CT
CCTTGAGTCGTGCATGTCTTATCCTTTTTTTTCCTTTTCAGTGT-----CATGCATATCCGTCCGGCCGAAGAAAGATAT
GCACTGGGGCACGGAAAAGAAGGGAACGAACGCCCATGGCGGGA------------------------------------
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------------------------------------------------------TGTGGTTGTTCCCCGCACTCCTCCTC
CGCGGCCATCAGATTGGTGGCGCTGGCGTCCACGGCCGGTGCGCCGCAACTTCCACGACTCTGCACGTACG---------
--ACGCCAACGGGCTCCACGCCCGCTAGCGTG----------CCTGCGTGCGTGCCGATTTTTTGTTTTGAGGGTCGTG-
-------------------------------------------------CGTGCGGATTATGAACGGTTCATTTGGGCCT
GCG--GCGCGGCCGAACCGTTTTTTCTGGCCCATAATTATTCCC-TGGAGATGGGGCCGACGGATACGGCGATGGGAACG
TTGGTG---ATC----------CGGCGGGGCGCAACGAGATACCCGCCGCGCGCCGCTCTCGCCGCGGCCTGACTCGTGT
GTCACGCACGCACGCACCTATCTCGGACGCTTCTGTTGCCTAGCGCGTTGTTGGTT----------------------CC
TCGCATCACTTG---CGGCCGGGAACATCGCGCCGGCCGGCGGAGCCGATAGAGCCGCCTCGCTGCGTGCCAAAACCCCA
AAACTAAATATAGTACGTAC------------------------------AGCAG---AAATCAAGACGAGATCGGGCGG
TCGATCGCCCTTTGAGCCCGAAGCGATAGGAAAGCCAACGGTGCCACAGCATATCAGATCAAGATCAGAACGAATATTGC
GTGCGCAATTACTCCTATCCCGATACGTGTGT--GTACGTAGTGTAGACT--TAGCTCGTGGCCTCTCTTCGCACGGGCA
CGGGCACGGGCACGTACCCTCTCCAGTCTATAAATCTTTCGGCGGCGCGGTGGCGTACATACATACGGGAGCGCAAAATC
CCCAACGGAACAGGGCTGACAGCGCGAGATCGGGC-------------------AGAGAGAGCGCGACAGATGGCGATCG
GCGGCGTTGGCGCTGGGGGCGGGGCTGGGGGCGCCGAGGCGCAGGGGAGGAGCGTGCTGGTGACGGGCGGCGCGGGGTTC
ATCGGCACCCACACCGTGCTGCAGCTGCTGGAGAAGGGCTACGCCGTCACCGTGGTGGATAACTTCCACAACTCCGTCCC
CGAGGCGCTCGACCGCGTCCGCCACATCGTCGGCCCCGCCCTCTCCGCCCGCCTCCAATTCATCTTCGTACGTATACTCC
TACCTGCCTGCGCCCACCGTCT--------AGTTTGTTCGATCCTGCTCTCGATGATCTCGTGCCTGCCGTGCCTGGCAG
AGCTCAGTACCCTGATTGATTGATAGATTGGTTCGGTGAATTTCAGGGGGACCTGACGATCAAGGATGACCTCGAGAAGG
TGTTCGCCGCCAAGAGGTAGGACGTAGTTGTTG----GATCCATCAATCGATCAGGAGCTTTGATTTGATCTTCCAAACT
CGTGGCGATCGATCAAATTAATTAACCGTTTTGCCGTGTGACTCTGACTGATGACCAGGTACGACGCCGTGATACACTTC
GCCGGGCTGAAGGCGGTGGCGGAGAGCGTGGCGCACCCGGAGATGTACAACCGCAACAACATCGTCGGCACCGTCAACCT
ATACGACGTCATGAAGAAGCACGGATGCAACAAGGTACTCCCTCCCCATAAAACCCCAATCCCGTCAGTACTGTCCCCTG
CTCTTCAG----AGATGATGGATGATCTTCAGTGATTGCTCTGACACTTTCGAGAACCTACGTG-CCAGTTGGTGTTCTC
GTCGTCGGCGACCGTGTACGGCCAGCCGGAGAAGGTGCCCTGCTTCGAGGACTCCCCCCTCAAGGCCCTCAACCCGTACG
GCAGGACCAAGGTAAACTCTCTG------CATACACTCTGTCAGAAACGATTGCCTGA--CACTCACGTTGCCGAAGTCG
ACAGCGATGGCCATCGGAGTGATCGGCAATTAATCTAACCTTTTCGAC----------TCTAATGGCGTCGATGTGGTTG
ACGCAGCTGTACCTGGAGGAGATGCTGCGCGACTACCAGCACGCGAACCCGGAGTGGAGGACGATCCTGCTGCGCTACTT
CAACCCCATCGGCGCCCACGAGAGCGGCGACATCGGGGAGGACCCCAAGGGCGTCCCCAACAACCTGCTCCCCTACATCC
AGCAGGTGGCCGTCGGCCGCCGCCCCGAGCTCAACGTCTACGGCCACGACTACCGCACCCGGGACGGCACCGCCGTCAGG
GACTACATCCACGTGGTCGACCTCGCCGACGGCCACATCGCGGCGCTCGAGAAGCTCTTCGCCACCCCTGACATCGGTGC
GTCCGTCCGCCGGCCCAGTTAACAACCAACCCATTTACCAGTGCGTGCATCACTC---GACCATTTCTG----ATTTGTC
AGGCTGTGTGGCGTACAACCTGGGGACGGGGCGCGGGACGACGGTGCTGGAGATGGTGAGCGCGTTCGAGAAGGCATACG
GCAAGGTTGATACCATCTTCTTTGCCCTTGATATTTCGCCTGTCGATTTCGATTGGGAAAGGGATTGAGACTGACGTTTC
TGGCTGCAGAAAATCCCGGTGAAGATGTGCCCCAGGAGGCCGGGCGATTCGGAGCAGGTGTACGCGTCCACCGCCAAGGC
CGAAGAGGAGCTCGGCTGGAGGTAACCGATCGATGTCCATTAACACTACTAGTCGCAA-TGTAGTTTGTCGAGAGAGATG
GATTAAATCTC----------GCACTCACTGGTGTGCCGCTTTGCT---TTGCAGGGCCAAGTACGGGATCGAGGAGATG
TGCAGGGACCAGTGGAACTGGGCCAAGAAGAACCCCTATGGCTACTGCGGAAACGCTG---AAAACAAAGACTGATTCGG
T--GGCCCATCGGGAGCCTTGTAGCGTGAAAGAAA-GATGTTGTCAATAAGCCCAGGGCGTTAAAGTGTGCCCAGAAAAT
GTTTCCTGTTGTAGTATTATTCGT-------------AAGATGGAACTTGAGTTGGGTGGGTTAGACTGGACTCTCACTC
GGCCGGGCTGGTGCTTGCCACAGAATTTTGGTCTGGTTTCAAACATGGGTCGTCATCTGCTTCCTTCTTTTTTCCTTCCA
ATTATAGAGCGAAACCGATGAAGCGAATCATTACAAACTTTTTACTGCTTGCAGAACA-------------TGCGTTTGG
TTACCTGCATGATTTTTGGGCACTTTGCATACTTGTTCCAGTTGGTCAGGCA----------------AAAAAACA-TCC
TTTGCATGTTGATTGATTGCCTGCATCCCTTTTTCCCTGCATCGTAGCGACGCCTCTGCGCACTATGTTTGGTTGCTCGC
ATTGATTGTGTTCATATTAGTGCATGTTG-TTGGTTGCATACATTGGACATGATTAAGACTTAAACAACTACACATAACA
CACTGTGTTACACTAGAGTGCCT-------AAC-------GGTAGACGGTGGTCGTGGCGCCGCGTCTGACACGACAAGC
ATGGAGTCGTGGGCGAGCGATCTCATCGGCGGCACAGCGAACTAGTTGCTACTGTTGTTGCCGCAAAGAAAGTTTGTGTG
TAGTAACGAATAGGAGGGCGCTGAGGCAGAGGATGATGGAGAAAAA-TGCAGTGTGCCCGCCATGGCGGCGTCAGTGTAG
TAGGACGCGGAGGAGAAGGCTGAAAAGAAT--------------------------------------------------
-----GACGATGGCAACGGTGCCAATGTAGTAGGATGCGCGCGAGGAGGCCGAGAGGAACGACACTGACGATGGCTTCGG
TGTAGCAGTACATGGGACAAGAGAAGAGGAACAATAGATGATGACCGCACGTGTAGTCGGACAAGAGAGAGGAGGTTGAG
AGGAACGACGTCGGCGATGGCGCTAGTGTAGCAGCACGTGGGATAGAACAACGATGGCGACGTGGCCAATGT
>chr5A_6
-----GGATTCCTCCTCCCCACGGCCGTTATCGTCGTCTCGGGAGAG----CTGCCGCCCCATCAATCAGACATGAAACA
G-----GTCGTGCATGTCTTATCCTTTTTTTTCCCTTTACCGTGTCATGCATGCATATCCGTCCGGCCGAAGAGAGATAT
GCACTGGGGCACGGAAAAGAAGAA----------------GGGA------------------------------------
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------------------------------------------------------TGTGGTTGTTCCCCGCACTTCTCCTC
CA-----------------------------ACGGCCGGTGCGCCGCAACTTCCACGACTCTGCACGTACGTAGTAGGTA
CCACGCCCTGCT---------------------------------------------------------------TCCTG
AAAACGTTGGTTTGCGGTGACGAGAGAGGACCCCTCCTGAC-------TCGTGCCGGTTATGAACGGTTCATTTGGGCCT
GCG--GCGGCCGAACCGT-TTTTTTCCGGCCCATAATTATTCCCCTGTGGATGAGGCCGATGGAGACGGCGATGGCAACG
TTGGTG---ATCGGGCGGGGCGGGGCGGGGGGCAACGAGATACCCGCCGCGCGCCGCTCTCGCCGCGGCGTGACTCGTGT
GTCACGCACGCACGCACCTATCTCGGACGCTTCTGTTGCGTAGCGCGTTGTTGGTTGCCGAATTACTGGCGCGCGGTTCC
TCACATCACTTATTACGGCCGGGAACATCGCGCCGGCCGGCGCAGCCGATAGAGCTGCCTCGCAGCGTGCCAAAACCCCA
ACACTAACTCT----TTTTTTTTTTGAGATTTCCCAAAACTAACTATAGTAGCAG---AGATCAAGACGAGATCGGCCGA
TCGATCGCCTTTTGAGCTCCAAGCGATAGGAAAGCCAACGGTGCCACAGCATATCAGGTCAAGATCAGAACGAATATTCA
---CGCAATTACTCCTATCCCGATCCGTGTGTACGTACTAGACTA-------TAGCTCGTGGCCTATCTTCGCACGGGCA
CG------------TACCCTCTCCAGTCTATAAATCTTTCGGCGGTGCGGTGGCGTGCGTACATACGCGAGTGCAAAATC
CCCAACGGAACACGG-------------------------------AGAGAGAGAGAGAGCGAGCGACAGATGGCGATCG
GCGGCGTTGGCGCTGGGGGCGGGGCAGGGAGCGGCGAGGGGCAGGGGAGGAGCGTGCTGGTGACGGGCGGCGCGGGGTTC
ATCGGCACGCACACGGTGCTGCAGCTGCTGGAGAAGGGCTACGCCGTCACCGCCGTCGACAACTTCCACAACTCCGTCCC
CGAGGCGCTCGACCGCGTCCGCCACATCGTCGGCCCCGCCCTCTCCGCGCGCCTCCAATTCATCTTCGTACGTATACTCC
TAACTGCCTGCGCCCACCGTCGTCTCCTTCAGCTTCTTCGATCCTGCTCGA------------------------GGCAG
AGTTCTGTACCCTGATTGATTGGTAGATTGGTTGGGTGAATTTCAGGGCGACCTGACGATCAAGGATGACCTGGAGAAGG
TGTTCGCCGCCAAGCGGTACTACCTAGTTGTTCGATCGATTCATCCTTCAGTCAGGAGCATCAATTTGATTCCCAA---T
CGTGGCGATCGATCGACGAGACTAACCGTTTTGCCGTGCGACT---ACTGATCACCAGGTACGACGCCGTGATACACTTC
GCCGGGCTGAAGGCGGTGGCGGAGAGCGTGGCGCATCCGGAGATGTACAACCGCAACAACATCGTCGGCACCGTCAACCT
CTACGACGTCATGAAGAAGCACGGGTGCAACAAGGTACTCCCTCCCCGTAAAACCCCAATCCCGTTAGCACTGTCCCCTG
CTCTTCAG----AGATGGCCGACGATCTTCAGTGATGGCCCTGACACTTTGGAGAATGTTTCCTACCAGTTGGTGTTCTC
GTCGTCGGCGACCGTGTACGGCCAGCCGGAGAAGGTGCCCTGCTTCGAGGACTCCCCCCTCAAGGCCCTCAACCCGTACG
GCAGGACCAAGGTAAACTCTCTG------CATACAGTCTGTCAGAAACGATTTCCTGACACACTCACGTTGCCCAAGTCG
ACAGCGATGGCCATCGGAGTTTTCGGCAATTAATCTAACCTTTTCGAC----------T-----GGCGTCGATGTGATTG
GCGCAGCTGTACCTGGAGGAGATGCTGCGCGACTACCAGCACGCGAACCCGGAGTGGAGGACGATCCTGCTGCGCTACTT
CAACCCCATCGGCGCCCACGAGAGCGGCGACATCGGGGAGGACCCCAAGGGCGTCCCCAACAACCTGCTCCCCTACATCC
AGCAGGTGGCCGTCGGCCGCCGCCCCGAGCTCAACGTCTACGGCTACGACTACCGCACCCGCGACGGCACCGCCGTCAGG
GACTACATCCACGTCGTCGACCTCGCCGACGGCCACATCGCCGCGCTCGAGAAGCTCTTCGCCACCCCTGACATCGGTGC
GTCCGTCCGCCGGCCCAATTAACAACCAACCCAACCCAGCGCCCGGCATCATTTACCACAAGTGCGCTTCTGTTTTTGTC
AGGCTGTGTGGCGTACAACCTGGGGACGGGGCGCGGGACGACGGTGCTGGAGATGGTGAGCGCCTTCGAGAAGGCATACG
GCAAGGTTGACACGTTCTTCTTTGCCCTTGATATTTTGCCTG----------ATGAAAACGGGTCTGAGACTGACATTTC
TGGCTGCAGAAAATCCCGGTGAAGATGTGCCCGAGGAGGCCGGGCGATTCGGAGCAGGTGTACGCGTCCACCGCCAAGGC
CGAAGAGGAGCTCGGCTGGAGGTAACCGATCGCCGTGAACACCAGTCA-------------TAGCTTATCGAGCGAGATG
GATTAAAACGTGCTA--------------TGGTGTGCCGCTTTGCTGCTTTGCAGGGCCAAGTACGGGATCGAGGAGATG
TGCAGGGACCAGTGGAACTGGGCCAAGAAGAACCCGTACGGCTACTGCGGCGACGCTG---AAAACAAAGACTGATCCGA
TGGGGCCCGTCGGGAGCCTTGTAACGTGAAAGAAA-GATG-TGTCAATAAGCCCAGGGCATTAAAGTGTGCCCAGAAAAT
GTTTTCTGTTGTAGTACTACTACTAGTACTACTATTCAAGATGGAACTTGAGTTGGGTGGGTTAGACTGGACTCTCACTG
GGCCGGGCTGGTGCTTGCCACAGAATTTTGGTCTGGTTTCAAACATGGGCCGTCATCTGCTTCCTT-TTTCTTCCTTCCA
ATTATAGAGCGAGACTGATGAAGCGAATCATTACAAACTTTTTACTGCTTGGATCTATAGTACTCGCAGGGTGAGTTTGG
TTACCTGGATCATTTTTGGGTCTGGTTAAAATATACAGGC----------------------------AAAAACCG-TCA
TTTGCATGTTGATTGGTTGCATGCATCCCC-TCTCCTTGTATCGTAGCAACGCCTCTATGCATTATGTTTGGTTGCTCGC
ATTGGCTGTGTTCATACTAGTGCATGTTGTTTGGTTGCATACACTGGACATGATTAAGACTT-AACAACTACACATAACA
CACAGTGTTACATTAGAGTGCCTCAGCGACAGC-------GGTGGACGGTGATTGCGGCACCGCATCCGATATGACAAGC
ACGGAGTCGCGGGCGAGCGATCTCATCAGCGGCGCGGCGAACTAGTTGCTAGCGTCGTCACCGCAAAGGAAGTCTGTGTG
GAGTAACAAATAGGAGGGCATTTAGGCAGAGGATGATGAAGAAAAAATGCAGTGTGCCATTGTCGCTG------GTGTAG
TAGGACGCGTGCGAGTAGGCCGAAAAGAAT--------------------------------------------------
-----GACGATGGCAACAACGCCGGTATAGTAGGACGCATGCGTGGAGGCTGAGAGGAACAATGTCGACGATGGCTTTGG
TGTAGTAGGATATGGGACATGAGACCA---------------------------------------------------AG
AGGAACGATGTCAGCGATGGCTTCAGTGTAGCAGGACATGGGACAGGAGACTGAGAGGAACG----------
>chr5D_6
-----GGATTCCTCCTCTCCACTGCCGTTATCGCCGTCTCGGGAGAGCTGCCTGCCGCCCCGTCAATCCAGCAATCTCCT
CCTTGAGTCGTGCATGTCTTATCCTTTTT---CCTTTTCCGTGT-----CATGCATATCCGTCCGGCCGAAGAGAAATAT
GCACTCGGGCACGGAAAAGAAGAA----------------GGGAACGAACGCCCATGGCGGGAGGGATGTGGTTGTTCCC
CGCACTCCTCCTCCAACGGCCGGTGCGCCGCAACTTCCACGACTCTGCACGTAGTACCACGCCAACGGGCTCCACCTCCA
GGCCCTGCTTCCTTCCATCCTGAAAACGTTGGGTTTTTTTTTTTTTGATCAATCCTGAAAACGTTGGTTTGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGAAAAGAAGAAGGGAACGAACGCCCATGGCGGGAGGGATGTGGTTGTTCCCCGCACTCCTCCTC
CA-----------------------------ACGGCCGGTGCGCCGCAACTTCCACGACTCTGCACGTA--------GTA
CCACGCCAACGGGCTCCACCTCCAGGCCCTGCTTCCTTCCATCCTGAAAACGTTGGGTTTTTTTTTTTTGATCAATCCTG
AAAACGTTGGTTTGCCGTGACGAGAGAGGACCCCTGACTCTACTACAGTCGTACCGATTATGAACGGTTCACTTGGGCCT
GCGGCGCGGCCGAACCGT-TTTTTCCCGGCCCATAATTATTCCCGTGGGGATGAGGCCGATGGAGACGGCGATGGGAACG
TCGGTGGTGATC----------GGGCGGGGGGCAACGAGATACCCGCCGCGCGCCGCTCTCGCCGGGGCGTGACTCGTGT
GTCACGCACGCACGCACCTATCTCGGATGCTTCTGTTGGCTAGCGCGTTGTTGGTTGCCGAATTACTGGCGCGCGGTTCC
TCACATCACTTTTTACGGCCGGGAACATCGCGCCGGCCGGCGCAGCCGATAGAGCTGCCTCGCTGCCTGCCAAAACCCCA
AAACTAACTAATTTCTTTTGTTTTTGAGAATGCCCAAAACTAACTATAGTAGCAGCAGAAATCAAGACGAGATCGGCCGA
TCGATCGCCTTTTGAGCCCGAAGCGATAGGAAAGCCAACGGTGCCACAGCACATCAGATCAGGATCAGAACGAATATTCA
---CGCAATTACTCCTATCCCGATACGTGTGTACGTACGTACTGTAGTAGACTAGCTCGTGGCCTCTGTTTACACGGGCA
CGGGCACGTACC--------CTCCAGTCTATAAATCTTTCGGCGGCGCGGTGGCGTGCGTACATACGCGAGCGCAAAATC
CTCACCGGGACGCGACTGACAGCGAGAGACGAAGAGAGAGAGGAACAGAGAGAGAGAGAGAGAGCGACAGATGGCGATCG
GCGGCGTTGGCGCTGGGGGCGGGGCTGGGGGCGGCGAGGGGCAGGGGAGGAGCGTGCTGGTGACCGGCGGCGCGGGGTTC
ATCGGCACGCACACCGTGCTGCAGCTGCTGGAGAAGGGCTACGCCGTCACCGCCGTCGACAACTTCCACAACTCCGTCCC
CGAGGCGCTCGACCGCGTCCGCCACATCGTCGGCCCCGCCCTCTCCGCCCGCCTCCAATTCATCTTCGTACGCTACGCAC
GCCTCCACCTTGCAGTTTCTCCTTCGTGTGCGCGTGCCTTAA--------------------------------------
-------------GATTGATTGACAGATTGAATCGGTGAATTTCAGGGGGACCTGACGATCAAGGATGACCTGGAGAAGG
TCTTCGCCGCCAAGAAGTAATA-GTTGTTGTTG----GATCAATCGATCTGTGAGGAGAC----TTTGGTTTCCCAAGTT
CGAGGCGATCGATCGATCCATGGAATTAATCTG-----------TGACTGATCACCAGGTACGACGCCGTGATACACTTC
GCCGGGCTCAAGGCGGTGGCGGAGAGCGTGGCGCACCCGGAGATGTACAACCGCAACAACATCGTCGGCACCGTCAACCT
CTACGACGTCATGAAGAAGCACGGGTGCAACAAGGTACTCCCTCCCCGTAAAACCCCAATCCCGTCAGTACACTCCCCTG
CTCTTCAGTCAGAGATGATCTATGATCTTCAGTGATTGCTCTGACACTTTCG-------ACGTG-CCAGTTGGTGTTCTC
GTCGTCGGCGACCGTGTACGGCCAGCCGGAGAAGGTGCCCTGCTTCGAGGACTCCCCCCTCAAGGCCCTCAACCCGTACG
GCAGGACCAAGGTAAACTCTCTGTCTCTGCATACAGTCTGTCAGAAACGATTTCCTGACACACTCACGTCGCCCAAGTCG
ACAGCGACGGCCATCGGAGTGATCGGCAATTAATCTAATCTTTTCGACTCTAATGGCAT-----GGCGTCGATGTGATTG
ACGCAGCTGTACCTGGAGGAGATGCTGCGCGACTACCAGCACGCGAACCCGGAGTGGAGGACGATCCTGCTGCGCTACTT
CAACCCCATCGGCGCACACGAGAGCGGCGACATCGGGGAGGACCCCAAGGGCGTCCCCAACAACCTGCTCCCCTACATCC
AGCAGGTGGCCGTCGCCCGCCGCCCCGAGCTCAACGTCTACGGCCACGACTACCGCACCCGCGACGGCACCGCCGTCAGG
GACTACATCCACGTGGTCGACCTCGCCGACGGCCACATCGCGGCGCTCGAGAAGCTCTTCGCCACCCCTGACATCGGTGC
GTCCGTCCGCCGGCCCAATTAACAACTAGCCCAGTGGTGTG------ATCATTTACCAGATCATTTCCG----TTTTGTC
AGGCTGTGTGGCGTACAACCTGGGGACGGGGCGCGGGACGACGGTGCTGGAGATGGTGAGCGCGTTCGAGAAGGCATACG
GCAAGGTTGATGCGATCTTCTTTGCCCTTGATATTTCGCCTGTCGATTTCGAATGGAAAAGGGATTGAGACTGACGTTTC
TGGCTGCAGAAAATCCCGGTGAAGATGTGCCCCAGGAGGCCGGGCGATTCGGAGCAGGTGTACGCGTCCACCGCCAAGGC
CGAAGAGGAGCTCGGCTGGAGGTAACCGATCGATCGCCATGAACACTACTAGTCGCAATTGTAGCTTATCGAGCGAGATG
GATTAAAAGACGCACGTACGTGCACTCACTGGTGTGCCGCTTTGCTGCTTTGCAGGGCCAAGTACGGGATCGAGGAGATG
TGCAGGGACCAGTGGAACTGGGCCAAGAAGAACCCGTATGGCTACTGCGGCAACGCTGCTGAGAACAAAGACTGATTCGG
T--GGCCCGTCGCGAGCCTTGTAACGTGAAAGAAAAGATG-TGTCAATAAGCCCAGGGCATTAAAGTGTGCCCAGAAAAT
GTTTCCTGTTGTGGTACTATTCGT-------------AAGTTGGAACTTGAGTT----GGGTTAGACTGGACTGTCACTG
GGCCGGGCTGTTCCTTGGTGAAGAA-TTTGGTCTGGTTTCGAACATGGGCCGTCATCTGCTTCCTTTTTT-----TTCAA
ATGATAGAGCGAGACCGATGAGGCAAATCATTACAAACCTTTTACTGCTTGGAGCAATAGTACTTGCAGGGTGCCTTCGG
TTACCTGCATCGTTTTTTGGCACTTTGCATACTTGTCGCAGTTGGGTCTGGTTGAGCATGTGCAGCCAAAAAACCCATCA
TATGCATGTTTA-TGGTTGCCTGCATCCCC-TCTCCTTGCATCCTAGCAACGGTTCTATGCATTGTGTTTGGTTGCTCGC
ATTGGCCGTGCTCATACTAGTGCATGTTGTTTGGCTGCATACACTGGACATGATTAAGACTT-AACAGCTACACATAACA
CACAGTGTTACACTAGAGTGCCTCGGCGACAGC-------GGCGGACGATGGTCGCGGTGCTGCGTGCGACACGACGAGC
ACGGAGTCGCGGGCGAGCGATCACATAGGCGGTGCGGCGAACTAGTTGCTAGCGTCGTCACTGCAGAGAAAGTCTTTGTG
GAGTAATGAATAGGAGGGTGCTGAGGCAGAGGATGATGAAGAAAAAATGTAGTGTTCACGCCATGGCGGAGTCAGTGTAG
TAGGACGCGGAGGAGGATGCTAAAAAGAAC--------------------------------------------------
-----GGCAATGGCAACGG-------------------------------------------------------------
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>chrUn_3209
CATGC---------------------------------------------------------------------------
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--------------------------------------------------------------------AAAAAACCAATA
TTTGCATGTTAATTGGTTGCCTGCATCCCC-TC-CAATGCATCGTAACAACGCATTTATGCATCGTGTTTGGTTCCTCGC
ATTGTCTGTGCTCATACTAATACATGTTGTTTGGTTGCATGCACTGGACATGATTAAGAGTT-AACAACTACACATAACA
TACAGTGTTACACTAGTGTGC-TCGGCGACAGCGGTGGGTGGTGGGCGGTGGTCGCGGTGCCGCGTCCGACACGACGAGC
ACA-AGTCGAGGGGGAATGATCTCATCGGCGGCGCGGTGAACTATTTGCTAGCGTCGTCGTCGTAGAGAAAGTCCATGTG
GAGTAACAAACAGGAGGGTGTAGAGGCAGAGGATGATGCAGAAAAA-TGCAGTGTGGCCGCCATGGCGGCGTCAGTGTAG
TAGGACGCGGAGGAGGAGGCTGAAAAGAACGACGATGACGATGGCGTCAGTGTAGTAGGACGCGGAGGAGGAGGCTGGAA
AGAACGACGATGGCGACGGCACCATTGTAGTAGGACGTGAGCTAGGAGGCCGAGAGGAACAACGTCCGTGATGGCTTCAA
TGTATCAGGAGATGGGAGAGGAGACTGAGAGGAATGACGACCGCGCGA--GTGTAGTAGGACATGAGAGAGGAGGTTGAG
AGGAGTGACGCCGGCGGTGACAGTGGTGCAACAGCACGCGAGAGAGAA------------------------
>chr1D_3209
CATGC---------------------------------------------------------------------------
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--------------------------------------------------------------------AAAAAACCAATA
TTTGCATGTTAATTGGTTGCCTGCATCCCC-TC-CAATGCATCGTAACAACGCATTTATGCATCGTGTTTGGTTCCTCGC
ATTGTCTGTGCTCATACTAATACATGTTGTTTGGTTGCATGCACTGGACATGATTAAGAGTT-AACAACTACACATAACA
TACAGTGTTACACTAGTGTGC-TCGGCGACAGCGGTGGGTGGTGGGCGGTGGTCGCGGTGCCGCGTCCGACACGACGAGC
ACA-AGTCGAGGGGGAATGATCTCATCGGCGGCGCGGTGAACTATTTGCTAGCGTCGTCGTCGTAGAGAAAGTCCATGTG
GAGTAACAAACAGGAGGGTGTAGAGGCAGAGGATGATGCAGAAAAA-TGCAGTGTGGCCGCCATGGCGGCGTCAGTGTAG
TAGGACGCGGAGGAGGAGGCTGAAAAGAACGACGATGACGATGGCGTCAGTGTAGTAGGACGCGGAGGAGGAGGCTGGAA
AGAACGACGATGGCGACGGCACCATTGTAGTAGGACGTGAGCTAGGAGGCCGAGAGGAACAACGTCCGTGATGGCTTCAA
TGTATCAGGAGATGGGAGAGGAGACTGAGAGGAATGACGACCGCGCGA--GTGTAGTAGGACATGAGAGAGGAGGTTGAG
AGGAGTGACGCCGGCGGTGACAGTGGTGCAACAGCACGCGAGAGAGAA------------------------
>chr3B_3215
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--------------------------------------------------------------------AAAAAACAAACA
TTTGTATGTTGATTGGTTGCCTGCATCCCC-TCTCCATGCATCGTACCAACAACTCTATACACTATGTTTGGTTGCTTAC
ATTGGATGTGCTCATAGTTATGCATGTTGTTTGGTTACATAGACTGGACATGATTAAGTGTT-AACAGCTGCACATGACA
CACAAAGTTAAACTAGAGTGCCTCGGTGATTGC-------AGTGGACGGTGGTCGTGGCGCCGCGTCTGACACGATGATC
ACGGAGTCGCGGGTGAGCGATCCTGTCGGCGGTGCCTTGAACTAGTTGCTAACTTCATCGCTGCAAAGAAAGTCTGTGTG
GAGTAACAAATAGGAGGGCGCTGAGACAGAGGACGATGGAAAAAAA-TATAATGCGCGCGCCATGGCTGCTTCAGTTTAG
TAGACCA-------------------------------------------------------CGGAGGGGGAGGCCAAGA
AGAAAGACGATGGCGACGTCGCTGGTGTAGTAGGACGCGAGCGAGGAGGCCAAGAGGAACGACGTCTACAATGGCTTCGG
TGTAGCAGGACATTGGAGAGAAGGCAGAGAGAAACGACGGCCGCGCGA--GTGTAATACAATGCGGGAGAGGAAGTTGAG
AGGAACAATGGCGGCGGTGGCGTTAGTGCAACAGCACACGGGAGAG--------------------------
>SNPs
SSSSS------------------------------------------------------S--------------------
---------------------------------------S---------------------------------S------
----------------------SSSSSSSSSSSSSSSSSS----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------------
-------------------SS--SSSSS-SSS--------------SSSS---SSS-S------S------SSSSSSSS-
------------------------------------------------------S-------------------------
--------SSSSSSSSSSS-------S---------------------S----S------S---S---------------
----------------------S-------S--------------------------------------S----------
--------------------------------------------------------------------------------
--S--------S------------------------------S------------S------------------------
-------S---SS-SSS-SS--------------------------------------------------------S--S
---------S--------------------------------------------------------------------SS
SSS--------------------------------------S-----SSS------------------------------
--------SS-SSS------------------------------------------S-S--------S------------
------------S-----------S----SSSS-S---------------------------S-----------------
---------------------------------S-----S----------------------------------------
--------S-------------------------------------------SS--S--S--------------------
--------------------------------------------------------------------------------
---------------------S----------S----------------SSSSSSSSSSSSSSSSSSSSSSSSSS-----
--S--S------------------------------------------------------------------S-------
-------------------SS------------------------S---SS--------S-SS-------S-S----SS-
--------------S-SSS--S----------------S----S--------S---------------------------
--------------------------------------------------------------------------------
S-----------------------S----------------------S--------------------------------
-------------------S------------------------------------SS----------------------
--------------------------------------------------------------------------------
-----------------------------------S----------------S--------------------S------
-----------------------------------------------------------SSSSS------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
-----------------S---------------S-SSSSS-SS--SSSSSSSS-S-----S------------S------
--------------------------------------------------------------------------------
-------------S--------------------------------------S---S-----------------------
--------------------------------------------------------------------------------
----------------------------------------S-----------------------S--S-----S------
-------S-S----------------------------------------------------------------------
-----------------------------------S--------------S-----------------------------
--------S--------------S----------------S------------------S--------------------
----------------S--------------------------------------------------------------S
-------------------------------------------------S----------------S---S---------
------------S--------------------------------------S--S-SS----------------------
----------S-------------------------SS-------SSSS-SS---------------------------S
---------------S-------------SS-S---S-----------S--------SS---------------------
----SS----------S--------------------------S------------------S-----------------
---S---------------------------S-----------S------------------------------------
-S-------S-----------------------S-S---------------SS--S--S--------------S------
S-------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
-------------------S----S----------S---S-----------------------SSS--------------
--------S----------S----SS-S--SS---SSSS-SS-SS--SSS-------S-----S----------------
----------------------S--------------------S----S-SS--SS-SS---SSSSSSSSSS
>forward_188
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GCACGGAAAAGAAGGGAACG----------------------------------------------------
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------------------------------------------------------------------------
>reverse_2078
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------ACT
CGTGGCGATCGATCAAA---------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>forward_195
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------AAAGAAGGGAACGAACGCCC---------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>reverse_2622
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------AATGGCGTCGATGTGGTTG
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>forward_2095
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------AAACT
CGTGGCGATCGATCA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>reverse_3978
--------------------------------------------------------------------------------
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---------------------------------------------------------GCGCACTATGTTTGGTTGCT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
