>input_sequence_42004
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------ATGGGGATACCCAACGATGAGGTGGTGCAAATCCGGCAAGCCGATGCGGTC
GGCGACCCGACCATGGTCACAGTCAGCTGCCCCGACAAGATCGGCCTGGGCTGTGACCTCTGCCGCATCGTCCTCCTCTT
GGGCCTCAACATCCTCAAGGCGGATAGGAGCACGGACGTACGGGAGGTGGTGCTACATTGTGCTGTGGGTGGCGGCAATG
CAGCGGAGTCGGTGGACCATGCATGGCCTGGAACCTCCTCAAGGAGAGGCTGGTTGAGCTCTGCCCTGTGCCCGCGCTGT
TTGGCATTGACATCTCCTACCTTGCTGCCGCCGGCCTCCTAGATAACCACGTGCCCCAGGTCTTCTTGCTCAAATT----
--------------------------------------------------------CTGCTGCTTCGACAGCATGGGCCT
CCTGCATCGTTGGTTTTAGTTTCACCACCTGAATGATCAGCTACTGCTTCAGATTTTTATGGATATGTTTTGCAGACGTG
ACACGCGTCTTGTGCGAGATGGAACTCACCATTATGAGAGTGAAGGTCTCCACTACGCCCGATGGGAGAGTGATGGACCT
TTGCTTCATCACAGATGGCAGGTTCATTTCCTATCTCCTAAATCCGGATGCATCCTCATCTTACTGATCTTATAACAAAC
TCATAACGTGTTGGGCTGGTAACATACATTTCAGGGAACTTCTATACACACAGAGTAGGAAGATCTTATAACAAACTCAT
AACGTCTTGGGCTGGAAACATACATTTCTTATCTCCAAAATCCGGATACATACATTTCAGGGAACTTCCATACACAAAGA
GTAGGAAGGACGAGGCCTATGAAAGGCTGCAGAACATCTTGGGCGACTCCGTGACGAGTTGCGAAATAGAGTCTGTGACA
GAGGACATGACAGAGGTCATGGAACAAATATTGGGCGTAGAGGAGCAGTTGAGCTGCTCTTGCCTGTCGGTCACCATGGC
CAACTCCCTCAGCCCCGCGCACACCCTAATCCA-----------------------------------------------
----------------------GATGCAGTGCGGTCACCACAAGGGCCTCCTGTACGATATCTTGAGGACACTCAAGGAC
TGCAACATCCAGGTACTTAGTTGTGCAAAGCCGGGGTCTATGATCGTTTTGCTTTGTGTTCTCTTAATGTGACATTACGA
GTTAATAAAATGCACTTTAATGAATAATAGGTAGTTGCGGCAAAACAATTCCCGGCCGCCACATTCCACCTGTCTCTCTG
GCCGGTTGGTAATCCTGTGAGGATAAGAAACATGGCCAACTTGTTTCCTTTCAGATCTCCTATGGCTGGTTCTCCTATCA
GCGAATCAAATCTCCTTTTTGTCTCAGATCTCCTACGGCCGGTACTATGTGGGGAGAAAGGGCGACTACGAGGTGGACCT
GTTCGTGGTGCGCCCGAACGGGAAGAAGATCATCGATGAGCTCGAGAAGAGCGCATTGTGCTCCTGCCTACGGGTGGAGC
TCCGACACCTGCTGCATGTGGCGATGGTGAACCGGGACCACAACACAGAGCTCCTAGTGGCAAACCCAGTGGAGGTCCCC
GGGAAGGGTCGGCCTCTAGTGTTGCACGACATAACCCTCATTCTCAAGGACCTCGAGAAGCGCATCTTCTTGG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TGCGCATGCATTGGAAACGGCGAAGC
TGCATCTCTATACACACCCATGACCATCCATTTCTAGTGACTACAATACACACCTATTATCGTAGCATCGATGTGATTCT
TGTGGTGGATGGTGGTTTTGTAAGCGGAGATCGGAAGGCATGTGGTGGATGACGGAGAGTGGGAGGTGTAGAGGGTGCAC
TTGGGTGAGGACGACTGCAAGCTCACTTGTGCAATGAGGAGTAGGATCGTCGACAGTATCACCAGCATGCTCATGGTTTG
GGACTGA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr4A_1_TraesCS4A01G310400
GCACGTAGCGGAGCGAGCGATCCGTCCGGCCAACGACGCGCACACAACGCGCTCGATTCATCTGATCGTAACAGCCTCCC
TACTGCATGGTGCATGCACACAGCTCCT---------ATGCATGTCAAGCTAACTAACTCCAACACACACACACACACGC
ACACGGACTCACGCACACACAC--GCACCTACGAACCTGACCCGGCCACACACCGCCCGCACACAC--GCGCCACGCTGC
TGCGTTCCGCA-CGTTCCGTCCGTCCCGCGTGCCACCAACGCGCCCGACGAGCCCGACGAGCCCGACGACACTAGTGCGT
TCCGTCCGTCCCGTGCGCATT---------CGACGAGGCCGATCACACACGCCGTGGCTTATTCCAACAAATCCTTCCGT
AGTCTCACCACATTGCACTTTCCTCTTGGTAAGCTGAACAGACACCTTATAAAGAAGACCACGACAAACCACTCTAGCTA
TCTGAGTGCAACATGGA---------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CGGAGCTGCGCCGCGCC
GGAGCACATATGGTGCATGCACGGTTGATTATTTAGCCCCAAAAAAGCGGAGCACGCACTTCCTGCTTTGGCGTGACTTG
CTTGTGTTGCGGGTGTGGCACATGTTTGTTTCATTGTTGCGATAAAGCCACTGTCATCGGTCATCGTCCCCATTTCTGTC
GTTGTTGCCGTTGCGTCGCTGCCTTGGAGGTGGCAGCTATGCGCCGTGCTAGCCCGCCCGTGTAAAACATTGGCCGCACA
CAACCACACAAGCCAACACAAGACTGGTCTTCCAGTGGAAACCAACTTTGAAGTTTGAAATTTTCAAATATAGTTTGAAA
TTTCCCCCTAGAGCTTAAGGTATTCTCAGTGAAACGTACGTGTAATTGGTAGAAGCCGACGGTACCTATATATATATGTG
ACTTTTAGCTGGCTACAAATGCACGCACCAGACCACACCCACTAGACTCATAGTACTAGTACCTCCTGTTTAAAGAAGAA
AAAGAGGTATATTTTGTTGGGAGGGGGTGATGGGGATACCCAACGATGAGGTGGTGCAAATCCGGCAAGCCGATGCGGTC
GGCGACCCGACCATGGTCACAGTCAGCTGCCCCGACAAGATCGGCCTGGGCTGTGACCTCTGCCGCATCGTCCTCCTCTT
GGGCCTCAACATCCTCAAGGCGGATAGGAGCACGGACGTACGGGAGGTGGTGCTACATTGTGCTGTGGGTGGCGGCAATG
CAGCGGAGTCGGTGGACCATGCATGGCCTGGAACCTCCTCAAGGAGAGGCTGGTTGAGCTCTGCCCTGTGCCCGCGCTGT
TTGGCATTGACATCTCCTACCTTGCTGCCGCCGGCCTCCTAGATAACCACGTGCCCCAGGTCTTCTTGCTCAAATT----
--------------------------------------------------------CTGCTGCTTCGACAGCATGGGCCT
CCTGCATCGTTGGTTTTAGTTTCACCACCTGAATGATCAGCTACTGCTTCAGATTTTTATGGATATGTTTTGCAGACGTG
ACACGCGTCTTGTGCGAGATGGAACTCACCATTATGAGAGTGAAGGTCTCCACTACGCCCGATGGGAGAGTGATGGACCT
TTGCTTCATCACAGATGGCAGGTTCATTTCCTATCTCCTAAATCCGGATGCATCCTCATCTTACTGATCTTATAACAAAC
TCATAACGTGTTGGGCTGGTAACATACATTTCAGGGAACTTCTATACACACAGAGTAGGAAGATCTTATAACAAACTCAT
AACGTCTTGGGCTGGAAACATACATTTCTTATCTCCAAAATCCGGATACATACATTTCAGGGAACTTCCATACACAAAGA
GTAGGAAGGACGAGGCCTATGAAAGGCTGCAGAACATCTTGGGCGACTCCGTGACGAGTTGCGAAATAGAGTCTGTGACA
GAGGACATGACAGAGGTCATGGAACAAATATTGGGCGTAGAGGAGCAGTTGAGCTGCTCTTGCCTGTCGGTCACCATGGC
CAACTCCCTCAGCCCCGCGCACACCCTAATCCA-----------------------------------------------
----------------------GATGCAGTGCGGTCACCACAAGGGCCTCCTGTACGATATCTTGAGGACACTCAAGGAC
TGCAACATCCAGGTACTTAGTTGTGCAAAGCCGGGGTCTATGATCGTTTTGCTTTGTGTTCTCTTAATGTGACATTACGA
GTTAATAAAATGCACTTTAATGAATAATAGGTAGTTGCGGCAAAACAATTCCCGGCCGCCACATTCCACCTGTCTCTCTG
GCCGGTTGGTAATCCTGTGAGGATAAGAAACATGGCCAACTTGTTTCCTTTCAGATCTCCTATGGCTGGTTCTCCTATCA
GCGAATCAAATCTCCTTTTTGTCTCAGATCTCCTACGGCCGGTACTATGTGGGGAGAAAGGGCGACTACGAGGTGGACCT
GTTCGTGGTGCGCCCGAACGGGAAGAAGATCATCGATGAGCTCGAGAAGAGCGCATTGTGCTCCTGCCTACGGGTGGAGC
TCCGACACCTGCTGCATGTGGCGATGGTGAACCGGGACCACAACACAGAGCTCCTAGTGGCAAACCCAGTGGAGGTCCCC
GGGAAGGGTCGGCCTCTAGTGTTGCACGACATAACCCTCATTCTCAAGGACCTCGAGAAGCGCATCTTCTTGG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TGCGCATGCATTGGAAACGGCGAAGC
TGCATCTCTATACACACCCATGACCATCCATTTCTAGTGACTACAATACACACCTATTATCGTAGCATCGATGTGATTCT
TGTGGTGGATGGTGGTTTTGTAAGCGGAGATCGGAAGGCATGTGGTGGATGACGGAGAGTGGGAGGTGTAGAGGGTGCAC
TTGGGTGAGGACGACTGCAAGCTCACTTGTGCAATGAGGAGTAGGATCGTCGACAGTATCACCAGCATGCTCATGGTTTG
GGACTGATCTCGCTTGCTGCGCCTCTTCTTTGTACATCCTAATATCAGTGGCTACTTTGCTGAGCTGCTCATGCTTGGGT
TTGTTAACTTGTCCTCTACAAACATGCTTGCAAGCATGTTATCTCGTGTTGATATTTCATGTGGTGTCACACCAAAATAT
CTAAAGTCGGTATCCTACCAGGTTTTGGTTTAAAACAGACATGTACGGTGTAATTTGTTTGGCATGTAGATAATAATACT
ACGAAGGTTCTTCGTTATGGAGCAAACATATGTCGCTGGTCAAGGAACTCGTTTGTGGAGTGTCGTATGTGTCCGCCGGG
ATCAGGAATGTCGCGCAAAGATCCTAATATAATATGGAAAAAATTAGGAGTGAGCTAGTCAAAGTAGTCACTGGAGAATG
CATGAGGTGCACCACACACACACACACACACACACACACACACACACACACACTTGTACACATCCTCCATAGGAAGAAGA
CATCGCCACCAATCCGCACATCCTTCTTCATGCTGGCATGAGCACCAGTCATGGGGATGGGAATGTGTGGGAGGAGGGCT
AGATGGACTCCGACTGCCGCTATGGCCGTTCCATCCATCTTTATTTTCCCTCTCTCATCCTGGTTGGCCCCGTAAGCATC
GTCCTCATCGCCCAGGGAATTGCATTCAAATAAGTCAGCGTGGCCGGAGCTGGTGGTGATGCATGGCGGCGACGCTTATT
GGAATTATCGACATGGAGCGGCCAGACGTGTTTGCTCTTCTGAGGATGGAGGGAGAACCGGAGCCGCCGACCATTGAACT
TGACCGGGTCTACGTCTGGTGCTACTGCGTCCAGCCAATTGTCTCCCGGACTCCGGTCATTGGATAGACTGCATGTTGTG
TCGTTATGGATCAAATAAACTACATGAAGGAGTAAATCCAAGTTACAGAGCTTTGGTAATAATGCAAGCAAATCTGATAC
CATTTGCCATGCATTCAGACTTTATTTCTAGTGGACCTAGTTATAGC
>chr2D_1
GCACGTAGCGGAGCGAGCGATCCGCCCGGCCAACGACGCGCACACAACGCGCTCGATCCATCCGATCGTAACAGCCTGCA
TG----------------CACAGCTCCTCCACACTACATGCATGTCAAGCTAACTAACTCCAACACACACACAC------
----GGACTCACG--CACACAC--GCACCTACGAACCTGACGTGGCCACACACCGCC--CACACAC--GCGCCACGCTGC
TGCGTCCCGCA-CGTTCCGCTCGTCCCACGCGCCACCGACAAGCCCGACGAGCCCGACGA---------CACCAGTGCAT
CCCGCCCGTCCCGCGCGTATCCGTCGCGCCCGACGAGCCCGACCACACACGCCGTGGCTTATTCCAACACACACCCCCTA
AACCACAGCCTAGAGGAGTCCG----------------------------------------------------------
-----------------------TCGTCGTCAACGTTGGCGCCAGGCAAGAGAGCCTGCTCCGCCGCCGGTCCTTTCCGC
AGCTGCGGGCACTCGCGCCAGAAGTGCCCGTGCTCCCCGAACTTGTAGCAGCGCCTGCGCCTGTTGCCGCC---------
----------GCTCCCCGACGCCACGCTGCGC-----------------CCGTCGTCGTCGTCCCGAGCACCGCCGTGTC
GACGCTCCCGTGTTGCCCACTGCGCCGCCGTCATGAGCAGCT--------------------------------------
-----------------------------------------------------------------------GCTCACCCC
CGCGCCCGCCGCCGTCTTGTCCACGGCGCCGAACCCGCTCGTCGAACACACGCAGCCGCCCGAGCGCTTCGTCGAACGCC
ATCTC-GTCACGT-------------------------------------------------------------------
--------------------------------------CGTGGAACTGCTCGATGCCGG---------------------
--------------------------------------------------------------------------------
----------------------------------------CAACGACGGGGAAGAGCCGATCCGGCACCGTATCCAGCAG
CTTCTTGACGAGCGCC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GCGTCGCCCAGCATCTCCCCGAGGTTGG--------------------------------
---------------CGTACCTCGCCGCCATCGCCGCGAGCCTCCCGCCGTACACGTCGAGCTCCTCGCCGTCCGCCATC
TTCATCCGGTCGAATTCGCCGCGCAGCGTCCCCAGCCTCACCGCGCTGACCCGATTGGCTCCGACGAA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CCTCCCTGGCGGTGAGCTTTGT
CAACACCTGCAGCAGCACATCCTCCG------------------------------------------------------
--------------------------------------------------------------------------------
------------------------GCAACGCGCGCGCGCCAGCTTGTCCTTCTTGGCGTTCACCGCCGCGTCGCCCGGCG
CCACCGCCTCCCATACGGTGTGGACGTCGAGGATCGCCTGCGCCTTGATGGTC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CAGACCGTGTAGTTGTCCGC
GGTCAGCATCGGCATCGCCATCGTCGCCGATCCGCCCGCGCCGCCGCTGTGTGGGACGAGCGCCATGGTTGGCGGTGATC
GTCTGAACCGAAGCTCTGTATACCAATTGTTGTTGCCGCTCTCTCACACGGATGGATGGAGGTAGAAGAAGGAGGAGCAC
ACAGTACACTGGAGTTTCACCCGGCTTCACAGCCCCGTTACTCTTCCCAGAGC------CCCAACTCTTCTCAATGAATA
CATAATCGTGTCCGCGACTTTGTAGTCCTACAGCTACGCAGCGCCCACGTCTCCTGCGCATGCATGCACGTAGCGGAGCG
AGCGATCCGCCCGGCCAACGACGCGCACACAACGCGCTCGATCCATCTGATCGTAACAGCCTGCATG-------------
---CACAGCTCCTCCACACTACATGCATGTCAAGCTAACTAACTCCA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------ACACACACACACACACGGACTCACGCACACACACGCACCTACGAACCTGACGCGGCCACACACTGCC
CACACACACACGCCAC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GCTGCTGCGTCCCGCA-CGTTCCGCTCGTCCCACGCGCCACCGACAAGCCCGACGAGCCC
GACGACACCAGTGCGTCCCGCCCATCCCGCGCGTATCCGTCACGCCCGACGAGCCTGACCACACACGTCGTGGCTTATTC
CAACAA-----------------------------------------
>chr7D_1
GCACGTAGCGGAGCGAGCGATCCGCCCGGCCAACGACGCGCACACAACGCGCTCGATCCATCTGATCGTAACAGCCTACA
TG----------------CACAGCTCCTCCACACTACATGCATGTCAAGCTAACTAACTCCAACACACACACAC------
----GGACTCACG--CACACACACGCACCTACGAACCTGACGCGGCCACACACCGCC--CACACACACGCGCCACGCTGC
TGCGTCCGGCA-CGTTCCGCTCGTCCCACGCGCCACCGACAAA---------CCCGACGA---------CACCAGTGCGT
CCCGCCCGTCCCGCGCGTATCCGTCGCGCCCGACGAGCCCGACCACACATGCCGTGGCTTATTCCAACACACACCTCCTA
AGCCACGGCCTAGAGGAGTCCG----------------------------------------------------------
-----------------------TCGTCGTCGACGTTGGCGCCAGCCAAGAGAGCCTGCTCCGCCGCCGGTCCTTTCCGC
AGCTGCGGGCACTCGCGCCGGAAGTGCCCGTGCTCCCCGAACTTGTAGCGGCGCCTGCGCCTGTTGCCGCC---------
----------GCTCCCCGACGCCACGCTGCGC-----------------CCGTCGTCGTCGTCCCGAGCACCGCCGTGTC
GACGCTCCCGTGCTGCCCACTGCGCCGCCGTCATGAGCAGCT--------------------------------------
-----------------------------------------------------------------------GCTCACCAC
CGCGCTCGCCGCCGTCTTGTCCACAGCGCTGAACCCGCTCGTCGAACGCACGCAGCCGCCCGAGCGCTTCGTCGAACGCC
ATCGTTGTCACGT-------------------------------------------------------------------
--------------------------------------CGTGGAACTGCTCGTTGCCGG---------------------
--------------------------------------------------------------------------------
----------------------------------------CAACGACGGGGAAGAGCCGATCCGGCACCGTATCCAGCAG
CTTCTTGACGAGCGCC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GCGTCGCCCAGCATCTCCCCGAGGTTGG--------------------------------
---------------CGTACCTCGCTGCCATCGCCGCGAGCCTCCCGCCGTACACGTCGAGCTCCTCGCCGTCCGCCATC
TTCATCCGGTCGAATTCGCCGCGCAGCGTCCCCAGCCTCACCGCGCGGACCCAATTGGCGCCGACGAA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CCTCCCTGGCGGTGAGCTTTGT
CGACACCTGCAGCAGCAGATCCTCCG------------------------------------------------------
--------------------------------------------------------------------------------
------------------------GCAACGCGCGCGTGCCAGCTTGTCCTTCTTGGCGTTCACCGCCGCGTCGCCCGGCG
CCACCGCCTCCCATACGGTGTGGACGTCGAGGATCGCCTGCGCCTTGATGGCC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CAGACCGTGTAGTTGTCCGC
GGTCAGCATCGGCATCGCCATCGTCGCCGATCCGCCCGCGCCGCCGCCGTGTGGGACGAGCGCCATGGTCGGCGGTGATC
GCCCGAACCGAATCTCTGTATACCAATTGTTGTTGCCGCTCGCTCACACGGATGGATGGAGGTAGAAGAAGGAGAAGCAC
ACAGTACACTGAAGTTTCACCCGGCTTCACAGCCCCGTTACTTTTCCTTTCCCAGGGCACCCAACTTTTCTCAACGAATA
CATAATCGCGTCCGCGGCTTTGTAGTCCTACAGCTACGCAGCGCCCACGTCTCCTGCGCATGCATGCACGTAGCGGAGCG
AGCGATCGGCCCGGCCAACGACGCGCACATAACGCGCTCGATCCATCTGATCGTAACAGCCTGCATG-------------
---CACAGCTCCTCCACACTACATGCATGTCAAGCTAACTAACTCCA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------ACACACACACACAC--GGACTCATGCACACACACGCACCTACGAACCTGACGCGGCCACACACCGCC
CACACACACGCGCCAC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GCTGCTGCGTCCGGCA-CGTTCCGCTTGTCCCACGCGCCACCGACAAACCCGACGAGCCC
GACGACACCAGTACGTCCCGCCCGTCCCGCGCGTAGCCGTCGCGCCCGACGAGCCCGACCACACACGCCGTGGCTTATTC
CAACAAA----------------------------------------
>chr7A_3
--ACGTAGCGGAGCGAACGATCCACTCGGCCAATTACGCGCACACCACGCGCTTGATCCATCTGATCGTAACAGCCTCCC
TACTGCATGGTGCATGCACACAGCTCCT---------ATGCATGTCCAGCTAACTAACTCCAACACACACAT--------
------------------------GCACCTACGAACCTGACGTGGCCACACACCGCC--CACACACACGCGCCACGCTTC
TGCGTCCCGCATCGTTTCGTCCGTCCCACGCGTCACCGACGTGCCCGACGAGCCCGACGA---------CATCAATGCGT
CCCGCTCGTTCCGCGCGCATCCGACGCGTCCGACGAGTCCGACCACAC--GCCGTGGCTTATTCCAACACACACACCCTA
AGCCACGGCCTGGCCTACACTCACATGCACGGTGTCTACCTACACAGGCATGGCTTGCTGCTAACATTCACACCCCAAGC
CATGGCCCTTGCACATGCCAGGCTCGTCGTCCACATCGCGCCATG-----------------GCCGTCGCACCATGCCGC
TGCGGCCTCCGCCGAGCAGCACCCCACGTCCTGCGCTTTCAGACTCGTGTACACGACGCGCACGCACGCAGTTGCCACGG
CCCGAGTCCAGCGCCCCGACGCGGTCAGTCCTCCGCTGCCTTCGCCACGCCGTCGTCGTCGTAG----------------
-------CCGTACTCCCCACGTCCCCGCGCTCCTGCCGCCACGTACGCGATCTGCGCAACCAGGTTCAGCGCCTCGACGC
GGTCCACTCCCGTGGTCCCGACGCGCCTGACGTGTCTGGTGCGCACCCATAACACGCACCGGTCGCTCCCGGCTCACCGC
CGAGCTTATTGCCCTGCACCGTTGCGCCGTCAAC----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CGCAGCGCAGCGCCTCCACTGTCGTCGCGCCGAGCCGCCGCTGCCTCTGCGACACCACGCAGGT
CCTGCGCGACCTCCTC----------------------------------------------------------------
---------------------------------------------GTCTCCGCGACCGCCGCTGCTCGT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CGCGCACACGGCATCACGCCACACCACCTTGGACTCGCCACGCGCCCGGCATCACGTCACACCGC
CGTGGACTCGCCGCGCGTTGCCGATGCCACGCGCTCACCGCGCGCCGTTGCCAAGACCTTCATGTC--------------
-----------------------------------------------------------------------CGCCGCGCG
CCACGGCCGTCCCTCAAACCTAGGTCTG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------ATACTAATTGTTGGCGCAGCTCTCTCTCTCGTAGGTA--GAGGTAGAAGAAGGAGGAGCGT
ACAGTACACTGAAGTTTCACCCGGCTTCACAGCCCCGTTACTC------------------------TTCTCAACAAATA
CATAGTCGCGTCCGCGACTTTGTAGTCCTACAGCTACACAGTGCCCACGTCTCCTGCGCATACATGTACGTAGCGAAGCG
AACGATCCGCCCGGCCAACGACGCGCACACCACGCGCTCGATCCATCTGATCGTAACAGCCTCCGTACTGCATGGTGCAT
GCACACAGCTCCT---------ATGCATGTCCAGCTAACTAACTCCA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------ACACACG------------------------CACGCACCTACGAACCTGACGCGGCCACACACCGCC
CACACACACGCGCCAC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GCTGCTGCGTCCCGCATCGTTCCGTCCGTCCCGCGCGTCACCGACGCGCCCGACGAACCC
GACGACATCAGTGCGTCCCGCCCATCCGGCGCGCATCCTACGTGCCCGACGAGTCCGACCACACACGCCGTGGCTTATTC
CAACA------------------------------------------
>SNPs
------------------------S--------------------------------S----------------------
--------------------------------------------------------------------------SSSSSS
SSSS---------SS--------------------------S---------------SS---------------------
-----S---------------------S--S------S---S------------------SSSSSSSSS---S-------
S---S--------S------S----------------S----S--------------------------S-SS-S---SS
--S-S--S-SS-SS-S---S--SSS-SSSSSSSS-SS--SS----SSSSSSSSSSS-SSSSSS---SS-SSSS-SSSSSS
SS--SSSSSSS--SSSS---------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S----SS-----S-S-
-SS--S-SSS--S---SSS-SSS-SS-SSSSSS-SS-----SSS-S---SSSSS----SSSSSSSSSSSS--S-SSSSSS
SS-SSSS-S-S-SS--SS-SSSSSSSSSSSSSSS-S-S-S-SSS-SS-SSSSSS-SSSSSSSSSSS----SSS-SSSSS-
SSS-S-SS-SSSS-SS-S----SSS-SS-SSSS-SSSSSS-SSSSSS--SS--SSS-S-SS-SSSSSSSSSSSSSS-S-S
SSSS-SSS--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S--S--S-S--S----SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-S--SS-S--SS--------SSSSSSSSS-SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS--S-S---SS-S-S----S-S---SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS-S-----S------SS--S-SSSSSSSSSSSS-SSSSSS-SSS-SS--S--S--SSSSSSS----
------------------------------------------------------------SS--S-----S--S-SSSS-
-----SSSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-S--SS---S--SSS-SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-S-S----S----S-S-S-S-S
----S--SS----SS----------SS-SSS-S-----------------------------------------------
---------------------------SSS---S-----S-SS-SSSS-S-SSSSSSS-SSS-SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS----S--SS-S--SSSS-S-S--SS-S---S-S----S-SSSSSSSSSSSSSSSSS
SSSSSSSSSSSS-S-SSSSS--S--SSSSS-S-SSSS-S--SSSSSS--SS--SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S---SS--S-SS----S-
--SS--SS-----S--SSSSSSSS-S-SSSSSSS---S-SSSSS-SSS-SSSSS--SS-----SSSSSS-S-S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------SSSSSSS-SS--SSS
S--SSSS-SSSSSS-SSS-SSSS-SSS-SSSSSSSSS-SSS-S--SSSS-SSSSS-SSSS-SSS-S-SS-SSSS-SSSS-
SSSSSSS-S-SS-SSSSSSSSS-SSSSS-SS-S-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS----------------SS--S---S---------S---SSSS-S--SSSS-SSSSSS-SSS-SSSSS
--SSSS---SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS---S--------S--SSSS-SS-S----SS-SS--SS-SSSS--S-S--SSS-S-SSSSS
SSSSSSSSS-SS-SS-SSSSSS---SSS-SSSSS-SS-S-S--SS-S--SSSS-SSS-SS-SSSSSSS-SSSS--S--S-
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_958
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CGTGTAAAACATTGGCCGCA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>reverse_2561
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GCCGGTTGGTAATCCTGTGA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>forward_1790
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TGTGCGAGATGGAACTCACC--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>reverse_3765
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GGAATGTCGCGCAAAGATCC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
