>input_sequence_42003
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------ATGGTGAATTTGAGGAGTATGCGCTTACTTGTCTT
TGTGCGGTTTCGTCCGATGATAATGGTATGTTTGCATTTAGCTATTTAATCTTCCATCCAGTATATCAATATGCAAGTTA
CTGAAATTTGCATTATGTTCACACTTTGTATCACCAAGTGCCATATTCAGAATTCACCATAACAATATTCTGTTGCGTTA
TTTTCACTTGCTGCCGGCAAGATGTTGCAGAGCCACCGCCGCCTCGCCGCTGGCTGCTGCATCTAGAGAACAATGAGCAT
CTAGCCAGCATTGTTTATAAAGTGTCCTGCTTCAGACGCTTAAGCGTCGCTTAAGTGATAAGGCGCCTTGGCAGCTCCTT
AGAAATATGCCTGC--------------------TTTAGGCGCTTAGGCGTCGCTTAAGCATCCTTTAGGTCACTTTACC
GCCTTATAAACCATGCTAGTGAGCCGTTATCTTGTGAGCTATGGTATATGGTACATGAACATCAGTAGCATTAGAGAGAA
AGGGAGGAGGAGCAGGAGCACAAGTTGCTGCTGCTGCCAGCTGCCGCTGCGTGAGAGACCGAGAGGAGGAGTCAGGGGTG
ACGTGGAGGAGGTGAGGAGGAGCGAGTGAGACTGGGGCAGGATCGCAGGAGCCCTCCGCAAGCTCGCCGCTGGCCTGCTG
CTGCCGCTGTTTAGGTCGGGAAGGAAATGTATTGGGGAGGGATTGCGCTGGACTGGGGT---ACCATGATAAGTAGGGTT
AGTCTTACTCTTACTGGACTGGGCTGTATCGGGATAGTATCATGGGAGGTATCCAGCACGTATCGGGAATTATCTTTTTT
TTTTGTTGCTTTATTAATCGCAGATACTTCACTGAAACGTATCAGCCACGGATTCGCTATGCACAGGACATATCAGTGTT
TCTTAGGTGTTCATTAGCTGTTTCAGATTTTCAACCAGAATATTAACTATATTGGAGCATGTCTAAAGTTTCATAAGCTT
AGCTAAGTGCCATTCAGTATATCAGTATGCAAGTTAATAAATTCTTCCTTTCCGTATTATCAATATGCAAGT--------
-------TTATTTTCACACTTTGTATCACCTAGTGCCATTTAACTAAGTGC------TAGCTGTTTTCACACTTTGTTAA
TTCACTTGAAGAGTAGGTGTGTTCGCTGCGCCGGTAAAGATAACAATGA----------AGAATTCAGAATTTGGTCACA
ACAACACCTATTTTTGACTCAATTTGAGCATTTCTAAAAACATGGGAGTAGGTGTGTTCGGTAGTTGTTTCAGATTTTCC
ACCGGAATATTAACTATGTTTTAGCATGTCTAAAATAGGCGTGTTAGCTAGCTGTTTCAGATTTCCACCAGAATATTAAC
TACTCCCTCCATACCAAAATAAGTGTCTCAACTCTAGTACAACT------------------------------------
-------TTGTAGCATGTCTAAAGTGTCATAAGCTTAGCTTAGCTGGTTCTCCGGTTATTCTTAGTTATGATAAAAAGAG
CATACCGATACCTTGTGCATTAG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ATATTGATTAACAAAACTAAACCATAATTGTAGGTGAGTGCTGTGAATGTGGTGATGATGTGAAGCATCCCACTGG
TGTGGAGTACAAAAAGGGTGAAGCAAAGCCCCATGGTCGATGCAAGTGCATTAACAGGCCTATCTCAGATGAAGCATTTA
ACAAGGTATTATTTTGTCGGCAAAAAACTTA----AT-ATGGATGTGCAGATGAGTCATTGTTAGTTTCATGTCTTTTTT
CCTTTTCTTTTTTTGCAGTTTATTGTTGTGCGTGATGAGGATTCCCTGGAGGCGGAGGAGGCTAGGGTGAGACGGCAATT
CAGGATACGCAACATAGCAGATGGCCATGGAGCGAGGGGCAAATACATCGTACCGGCGAAACGTGTGCAAGCATAG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr4A_1_TraesCS4A01G054200
AGTCTTCTAACATAGCAGAATCCTTGGCGAAATCTGAATTTACTCGTTCAACCCAGATAACACTCTCATTTTCTTGTTTC
ATCCCAAGCAGCTTTTTCCTTGTCTCCTTCTCAGCTAGCAAGTTCATATCCAATTCATATTGGCTGGATACCCCTTCCTC
ACAGTTTTCAGTAGCAGAAATATCTTCAGAGGGAGCAACAGAGGTGTCATGCTTTCGGGATTTGCTAGTGTTTCCAAGAC
CACCATGAAATTATTATTGATAATTTATAACAGAGGTGTCATGCTTGTACTTTTGCTCAGCTATGTGATTGCGTTTTCAG
ATTCCTGACCCAGTGTTGTTTTACGGGTTGGACTTACTGACCTCGTGTCAGTGATCACTGCTGCTGTGATATAACAGCAA
ACTGTTGATTTGTTTGTCACAACTTTTCTTGTTTGGTACCTTGGTAGTAGTAATTAGCATTCTGTCATCTAGTAGCAATC
AAGTTTGCTGGGCGCTCATTGGTTGCAAGAACAATGATGCA-TTTGTGGTAATTAATCACAAGAGTTGTTTGGTCCATCT
CTTATTC-TTTTGTAATTGTTATCTGAACTAGGTACTTGGGTGAGCTTTCCAAAGAGGACAGGTATGTTTGGCATAAACT
ATATTGGCGTGATGGAACAAGGAAGAATTCGAAAGAAGCTTTGGATGCAATGATGAACCTTGACCCCACTTTGGAAGTAG
TTAAATGTTTACTAGACAAGCATAATGAGGAACACCATCTTTTCGAGGTTTGTTCTCTACCTTGTTCTCTCTTTCCATTT
TTTTTATCGCCGCTCTCCCTCACCACCTTTCTTATGTTTTAGGATCTTGCATATGAAGTCAAGCAGGTTGTGAGTTACAA
AGCTCATTTTCCGGAAAACGATTCTCAATATGAATGCAGGTCCTTCTCACATTTAAATGTGCTTGCAAAAAGAGGATTGA
ATGACAACCAAAATCTTCTCTTCATTGAAATCACATGCACA---GATGGTGAATTTGAGGAGTATGCGCTTACTTGTCTT
TGTGCGGTTTCGTCCGATGATAATGGTATGTTTGCATTTAGCTATTTAATCTTCCATCCAGTATATCAATATGCAAGTTA
CTGAAATTTGCATTATGTTCACACTTTGTATCACCAAGTGCCATATTCAGAATTCACCATAACAATATTCTGTTGCGTTA
TTTTCACTTGCTGCCGGCAAGATGTTGCAGAGCCACCGCCGCCTCGCCGCTGGCTGCTGCATCTAGAGAACAATGAGCAT
CTAGCCAGCATTGTTTATAAAGTGTCCTGCTTCAGACGCTTAAGCGTCGCTTAAGTGATAAGGCGCCTTGGCAGCTCCTT
AGAAATATGCCTGC--------------------TTTAGGCGCTTAGGCGTCGCTTAAGCATCCTTTAGGTCACTTTACC
GCCTTATAAACCATGCTAGTGAGCCGTTATCTTGTGAGCTATGGTATATGGTACATGAACATCAGTAGCATTAGAGAGAA
AGGGAGGAGGAGCAGGAGCACAAGTTGCTGCTGCTGCCAGCTGCCGCTGCGTGAGAGACCGAGAGGAGGAGTCAGGGGTG
ACGTGGAGGAGGTGAGGAGGAGCGAGTGAGACTGGGGCAGGATCGCAGGAGCCCTCCGCAAGCTCGCCGCTGGCCTGCTG
CTGCCGCTGTTTAGGTCGGGAAGGAAATGTATTGGGGAGGGATTGCGCTGGACTGGGGT---ACCATGATAAGTAGGGTT
AGTCTTACTCTTACTGGACTGGGCTGTATCGGGATAGTATCATGGGAGGTATCCAGCACGTATCGGGAATTATCTTTTTT
TTTTGTTGCTTTATTAATCGCAGATACTTCACTGAAACGTATCAGCCACGGATTCGCTATGCACAGGACATATCAGTGTT
TCTTAGGTGTTCATTAGCTGTTTCAGATTTTCAACCAGAATATTAACTATATTGGAGCATGTCTAAAGTTTCATAAGCTT
AGCTAAGTGCCATTCAGTATATCAGTATGCAAGTTAATAAATTCTTCCTTTCCGTATTATCAATATGCAAGT--------
-------TTATTTTCACACTTTGTATCACCTAGTGCCATTTAACTAAGTGC------TAGCTGTTTTCACACTTTGTTAA
TTCACTTGAAGAGTAGGTGTGTTCGCTGCGCCGGTAAAGATAACAATGA----------AGAATTCAGAATTTGGTCACA
ACAACACCTATTTTTGACTCAATTTGAGCATTTCTAAAAACATGGGAGTAGGTGTGTTCGGTAGTTGTTTCAGATTTTCC
ACCGGAATATTAACTATGTTTTAGCATGTCTAAAATAGGCGTGTTAGCTAGCTGTTTCAGATTTCCACCAGAATATTAAC
TACTCCCTCCATACCAAAATAAGTGTCTCAACTCTAGTACAACT------------------------------------
-------TTGTAGCATGTCTAAAGTGTCATAAGCTTAGCTTAGCTGGTTCTCCGGTTATTCTTAGTTATGATAAAAAGAG
CATACCGATACCTTGTGCATTAG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ATATTGATTAACAAAACTAAACCATAATTGTAGGTGAGTGCTGTGAATGTGGTGATGATGTGAAGCATCCCACTGG
TGTGGAGTACAAAAAGGGTGAAGCAAAGCCCCATGGTCGATGCAAGTGCATTAACAGGCCTATCTCAGATGAAGCATTTA
ACAAGGTATTATTTTGTCGGCAAAAAACTTA----AT-ATGGATGTGCAGATGAGTCATTGTTAGTTTCATGTCTTTTTT
CCTTTTCTTTTTTTGCAGTTTATTGTTGTGCGTGATGAGGATTCCCTGGAGGCGGAGGAGGCTAGGGTGAGACGGCAATT
CAGGATACGCAACATAGCAGATGGCCATGGAGCGAGGGGCAAATACATCGTACCGGCGAAACGTGTGCAAGCATAGATGT
ATAATCATTAAGG-----------------------------TTGTGCTGCGTTTGTTTTTGGTACCAGTGATGCTGAGT
AAGTAGCATGTGAGTGTTTGGCGTCTTGCTTGCTGACGTAGAAGCCTCAGCTCGTTTGGGTGGAGGAC------------
-GGTCCTGTGCGGAACCCTCGTTTATGGTGGAATATCTGAAACAGCTAATGAACACCTACGTTTTGGGGGAATAAGCTGG
CAAAACCAAAGTGGCTTTTTCAGTGCAATGTGTTTTGTTGTGTCAGTGAAGTGTTTTTCAGTGCAATGTGTTTTGTTGTG
TCAATGAAGTGTTTCTCAGCGCAATG------------------------TGTTTTGTTGTGACAGTGAATTAGTCATAG
AAATGTGGGA----------TACATGCGTGACAAGAGAACT----------------------------TTGAGTCTGGC
GCCCAAGCTTTTGTCAAATTGTGTACTCAAACCTAAGTGGAGTATAATTTATTCACAACCAACACTGTACTTTGTACTCT
CTCTGTATCAAAATATAAGACGTTTTTTTTTGGGTCTAAATTTAGACTGAAAAATATTGTATATGTTGTTAGAGGGAG--
TATCTTATAGCAATCTAACTTGAAGTACACTGAAGAATGTTGAAGCGTCTTGCCTCATTAGAGGAGACTCTGCGTGTTAT
ATAGCAGGGGCTTATCCTTGGATATGCATGCATCGCTGGAGTATATCTTGGAGAAGATCTACAGAGGGAGATTGCTAGAG
ATAAACTAGGCTACGGTAGCAAGACATAAATGTTAGGGTCTGACTATGTCATATCTAAGTATTTTTT----GCCCCCTGT
TTTA--TTTTTGTTGAGCGACATTTTTTTTTGCATGTAATGTTAGTTGGAACGTTAAAAAGCCGAAAAACTGGTTATCCA
CTTGACACAATTAGATCTCATGGCTAGTAGGTAGCTCGGAACTTAATGAAGTCATAAGCAGGGACAGATCTGAGGCTTTT
TTGAAACTTCAAAACACTAGTTTTTTTTAAAAAAATAGTAAGTATTTTTTGGAATGCGAACCGTTTTA
>chr4B_1
AGTCTTCTGACATAGCAGAATCCTTGGTGAAATCTGAATTTACTCGTTCAACCCAGATAACACTCTCATGTTCTTGTTTC
ATCTCAAGCAGCTTTTTCCTTGTCTCCTTCTCAGCTAGCAAGTTCATATCCAATTCATATTGGCTGGATGCCCCTTCCTC
ACAGTTTTCAGTAGCAGAAATATCTTCGGAGGGAGCAACAGAGGTGTCATGCTTTCGGGATTTGCTACTGTTTCCAAGAC
CACCATGAGATTATTATTGATAATTCATAACAGAGGTGTCATGCTTGTACTTTTTCTCAGCTATGTGATTGCGTTTTCAG
GTTCCTGACCCAGTGTTGTTTTACGGGTTGGACTTACTGGCCTCGTGTCAGTGATCACTGCTGCCGTGATATAACAGCAA
ACCGTTGATTTGTTTGCCACAACTTTTCTTGTTTGGTACCTTGGTAGTAGTAATTAGCATTCTGTCATCTAGTAGCAATC
AAGTTTGCTGGGCGCTCATTGGTTGCAAGAACAATGATGCATTTTGTGGTAATTAATCACAAGAGTTGTTTGGTCATCTC
TTATTTATTTTTGTAATTGTTATCTGAACTAGGTACTTGGGTGAGCTTTCCAAAGAGGACAGGTATGTTTGGCATAAACT
ATATTGGCGTGATGGAACAAGGAAGAATTCGAAGGAAGCTTTGGATGCAATGATGAACCTTGACCCCACTTTGGAAGTAG
TTAAATGTTTACTAGACAAGCATAATGAGGAACACCATCTTTTCGAGGTTTGTTCTCTACCTTGCTCTCTCTTTCCATTT
TTTTTATCGCCGCTCTCCCTCACTACCTTTCTTATGTTTTAGGATCTTGCATATGAAGTCAAAGAGGTTGTGAGTTACAA
AGCTCATTTTCCGGAAAACGATTCTCAATATGAATGCAGGTCCTTCTCACATTTAAATGTGCTTGCAAAAAGAGGATTGA
ATGACGACGGGAATCTTCTCTTCATTGAAATCACATGCACA---GATGGTGAATTTGAGGAGTATGCGCTTACTTGTCTT
TCTGCGGTTTCGTCCGATGATAATGGTATGTTTGCATTTGGCTATTTAATCTCCCATCCAGTATATCAATATGCAAGTTA
CTGAAAATTGCATTATGTTCACACTTTGTATCACCGAGTGCCATATTCAGAATTCACCATAACAATATTATGTTGCGTTA
TTTTCACTTGCTGCCGGCGAGATGTTGCAGAGCCACCGCCGCCTCGCTGCTGGCTGCTGCATCTAGAGAACAGTGGGCAT
CTAGTCAGCATTGTTTATAAAGCGTCCTGCTTCAGACGCTTAAGC-----------GATAAGGCGCCCTGGCAGTGCCTT
AGAAATATGCCTGCTTTAGGCGCTTAAATGTGCGTTTAGGCGCTTAGGCGTTGCTTAAGCATCCTTTAGGTTGCTTTACC
GCCTTATAAACCATGCTAGTGAGCCGTTATCTTGTGAGCTATGGTATATGGTACATCAATATCTGTAGCATTAGAGAGAA
AGGGAGGAGGAGCAGGAGCACAAGTTGCTGCTGCTGCCAGCTGCCGCTGCGTGAGAGACCGAGA---GGAGTCAGGGGTG
ACGTGGAGGAGGTGAGGAG---CGAGTGGGACTGGGGCAGGATCGCAGGAGCCCTCCGCAAGCTCGCCGCTGGCCTGCTG
CTGCCGCTGTTTAGGTCGGGAGGGAAATGAATTGGGGAGGGATTGTGCTGGACTGGGGTACCACCATGATAAGTAGGGTT
AGTCTTACTCTTACTGGGCTGGGCTGTATCGGGATAGTATCATGGGAGGTATCCAGCACGTATCGGGAAGTATCTTCTTT
GTTTTTGTTGCG-TTAATCGCGGATACTTCACTGATACGTATCAGCCACGGATTCGCTATGCCCAGGACATGTCGGTGTT
TCTTAGGTGTTCATTAGCTGTTTCAGATTTTCCACCAGAATGTTAACTATATTGGAGCATGTCTAAAGTTTCATAAGCTT
AGCCAAGTGCCATTCAGTATATCAGTATGCAAGTTAATAAATTCTTCCATTCAGTATTATGAATATGCAAGTTGATAAAG
TTTTGTGTTATTTTCACACTTTGTATCACCGAGTGCCATTTAACTAAGTGC------TAGCTGTTTTCACACTTTGTTAA
TTCACTTGAAGAGTAGGTGTGTTCGCTGCGCCGGTAAAGATAACAATGA----------AAAATTCAGAATTTGGTCACA
AC------------------------------------AACATGGGAGTAGGTGTGTTCGGTAGCTGTTTCAGATTTTCC
ACCGGAATATTAACTACTCCGGTTAATATTAG------------------------------------------------
--------------------------------------------------------------------------------
-----------AGCATGTCTAAAGTGTCATAAGCTTAGCTTAGCTGGTTCTCCGGTTATTCTTAGTTATGATAAAAAGAG
CATACCGATACCTTATGCATTAG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ATATTGATTAACAAAACTAGACCATAATTGTAGGTGAGTGCTGTGAATGTGGTGATGATGTGAAGCATCCCACTGG
TGTGGAGTACAAAAAGGGTGAAGCCAAGCCCCATGGTCGATGCAAGTGCATTAACAGGCCTATCTCAGATGAAGCATTTA
ACAAGGTATTATTTTGTCAGCAAAAAACTTGGAATCCCATGGATGTGCAGATGAGTAATTGTTAGTTTCATGTCTTTTTT
CCTTTCCTTTTTTTGCAGTTTATCGTTGTGCGTGATGAGGATTCCCTGGAGGCGGAGGAGGCTAGGGTGAGACGGCAATT
CAGGATACGCAGCATAGCAGATGGCCATGGAGCGAGGGGCAAATACATCGTACCGGCGAAACGTGTGCAAGCATAGATGT
AGAATCATTAAGG-----------------------------TTGTGCTGCGTTTGTTTTGGATACCAGTGATGCTGAGT
AAGTAGCATGTGAGTCTTTGGCATCTTGCTTGCTGACGTAGAAGCCTCAGCTCATTTGGGTGGAGGATAAGCTGGTGCGA
AGGTCCTGTGCAGAACCCTTGTTTATGGTGGAATATCTGAAACAGCTAATGAACACCTACGTTTTGGGGGAATAAGCTGG
CAAAACCAAAGTGGCTTTTTCAGTGCAATGTGTTTTGTTGTGTCAGTGAAGTGTTTTTCAGTGCAATGTGTTTTGTTGTG
TCAGTGAAGTGTTTTCCAGTGCAATG------------------------TGTTTTATTGTGACAGTGAAGTAGTCATAG
AAATGTGAGA----------TACATGCGTGACAAGAGAACTTTTTTTTTTTTGAAACGACAAGAGAACTTTGAGTCTGGC
GCCCAAGCTTTTGTCAAATTGTGTACTCAAACCTAAGTGGAGTATAATTTATTCACAACCAACACTGTACTTTGTACTCC
CTCCGTATCAAAATAGAAGTATGTTTTTTTT--GTCTAAATTTAGACCAGAAAACATTGTATATTTTGTTAGAGGAAGTA
TATCTTATAGCAATCTAACTTGAAGTACACTGAAGAATGTTGAAGCGTCTTGCCTCATCAGAGGAGACTCTGCGTGTTAT
ATGGCAGGTGCTTATCCTTGGATATGCATGTATCGTTGGAGTATATCTTGGAGAAGATCTACAGAGGGAGATTGCTAGAA
ATAAACTAGGCTACGGTAACAAGACATAAATGTTA-GGTCTGACTATGTCATATCTAAGTATTTGTTTATGGCCCCCTGT
TTTTCTTTTTTGTTGAGCGACATTTTTTTCACT-TGTAATATTAGTTCGAACGTTAAAAAGCCGAAAAACTGGCTATCCA
CTTGACACAATTAGATCTCATGGCTATTAGGTAGCTCGGAACCTAATGAAGTCATAAGCAGTGACAGATCTGAGGCTTTT
TTGAAACTTCAAAACAATAGTT-TTTCTAAAAAAAAAGTAAGCATTTTTTGAAATGTGAACCTTATTA
>chr5A_575
TTGTTTATCTAC--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------ACTAGGTACTTGGGTGGGCTTTCCAAAGAGGACAGGTATGTTTGGCATACACT
ATATTGGCGTAATGGCACAAGGAAGAACTCGAAAGAAGCTTTGGATGTAATGATGAACTATAACCCCACTCGGGAAGTAG
TTAAAGCTTTACTGGACAAGCACAATGAGG---ACCATCTTTTGGAGGTTTGCTATCTCCCTTGCTCTCTCTTGCCGTTT
TCTTGATTGCCGCTCTCCCTCACTGTCTTTCTTATGTTTTAGGATCTTGCATATGAAATCAAGAAAGTTGTGAGTTACAA
AGCTCACTTCCCAAGAAAAGGTTCTCAGCATGAATGCAGGTCCTTCTCACATTTAAATGTGCTTGTAGAAAGAGGACCTA
ATGCCATCGAAGATCTTCTCTTCATTGAAATGACCTGCACAACAGATGGTGAATTTGAGGAATACACGCTTAGTTGCATT
TGTGTGGTTTCATCCGAAGATGATGGTATGTTTGCATTTTCGTTATTTAGC-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TATTCAATTCTTCCATTCAGCATTATCAGTATGCAAGTCAGTAAAA
TTTTGCATTCTATTCATACTTTGTATCACCTAGTGCCTTTTAACTAAGTGGTACTGGTAGCTGTTTTCACACTTTTTTAA
TTCACTAGAAGAGTAGGTGTGTTTGCTCCATGGGTACAGCCGTACAGGTAACAATAAAGAAAAATCAGCATTTGCTCACA
GCACATG---TTTTTGACTC-ATTTGAGCATGTCTAAAAACATAAGAGTAAGTGTGTTCGCTAGCTGTTTTAGATATTCG
---------------------------------------------------------------------AGAATATTAAC
TACTCCCTCCGTCCCATAATATAAGAGCGTTTTTGACACTACACTAGTTTCAAAAACGCTCTTATATTATGGGACGGAGG
GAGTATGTTGTAGCATAGTTAATCGATGAAACCGTATAAGTGTTCCTAGGACAGATCAGCTATATTTTTTTCGCTGACTT
GAATTGAAAGAATAGTTCTGCCTGAAATGTTATGCTGAACCTAGTAACCATGTGGTGCAGATTTACATTGCCAATAAAAT
CATGCTCGGTTCTACCGGTAGCCAATATAAGGATACTCCACAAGACCATGCTGTGAGAGATTCTGAATGACTTGTACTAT
GATAGTCATCAAGCTCTAGTATTTCTTTTGTACATTAGAATGCTAATTGTAGGTGAGTGCTCTGAGTGTGATGATGTACA
TTACATATTGGTTAACAAAACTATACCATAATTGTAGGTGAGTGCTGTGAATGCGGTGATGATGTGAAGCATCCCACTGG
TGCGGAGTACAAAAAGTGTGAAGCCAAGCCCCATGTTCGGTGCAGGAA---------GCCTATATCAGAAGAAGAATTTA
ATGAGGTATTATTTTGTTGGCAATTTTTTAGAATGAT-ATGGATGTGCAGATGAGTCAATGTTAGTTTCATGTCTTTT--
--------TTTTTTGCAGTTTATTGTTGTGCGCGATGAAGATTGGCTGGAGACGGAAGAGGCTGCGGTGAGGTGGCAATT
CAGGATGCGCAACGCAGCAGATGGCCATGGAGCGAGGGGCAAATACATCGTACCGGCAAAACGTGTGCAGGCATAGATGT
AGAGTCGATGGGGCCTAGTGCTTGCTTTGCTGTATGCCATTCTTGTGCTGCGTTCGTTTTTGGTACCTGTGATGCTGAGT
CAGTACTA--TGTGTCTTGAGTGTTTGGCTTGCTGATGTAGAAGCCTC-----GTCTGGGTGGAGGATAAGCTGGTGTGA
AGATCCTGTGCAGAACCCGTGTTTATGGTGTAGGTGA-----------------ACCCAAGTTTTGCGGGAGTAAGCTGG
CAAAACGAAAGTGACC-----------ATGTGCTTTGTTGGTGATTT----TGTTTGGTAAAGCAATGTGCTCTTGCAGT
GGATGGTACCTACTTACAGGTAGCTTTTCATGCCTGAGAGTCTCAAGACCTGTTTTGTTGTCACAGTGAAGTAATCACGG
AAATGATTGAGAAATGAGAGTACATCCGTGACGAGAGAA-----------------------------------------
-------CTTTTGTCAAATTGTGTACTCAAACCTAACTATAGTTTATTTA---------CAACACTGTACTTTGTATCT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>SNPs
--------S------------------S-----------------------------------------S----------
---S-----------------------------------------------------------------S----------
---------------------------S---------------------------------------S------------
--------S----------------S----------------------------S-------------------------
S--------------------------------------S------------------------S---------------
--S-------------S---------------------------------------------------------------
---------------------------------------------------------------------------SSSSS
S-SS--S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
-----------------------S---------------------------------------S----------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
---------------------------------------S------------S---------------------------
------S----------------------------S---------------------------------S----------
------------------S----------------------------S------------------------S--S----
----S-----------------S----------------------SSSSSSSSSSS-----------S------SS----
---------------------------------------------------S-------------------SS-------
--------------------------------------------------------S--S---S----------------
----------------------------------------------------------------SSS-------------
-------------------SSS------S---------------------------------------------------
---------------------S-------S---------------S----------------------------------
-----------------S---------------------------------------------------S------S---
S---S-SSSSSSS--------S-------------S--------------------------S--------S--S-----
--------------------------------S--------S--------------------------------------
---S--------------------------------------------S---S---------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
---SSSSSSS----------S----------S--------------------------------S---------------
----------------SSSSSSSSS--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
----------S-S---S----SSS-SSSSSSS-SS-SSSS-SSS------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
------------------------S-------------------------------------------------------
------------------------------S-------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
---------------S---------------------------------------------------S------------
-----------S-------S------------------------------------------------------------
--------------------------------------------------------------------------------
---S----------SS---S--------------------------------------------------S---------
-------S------------------------------------------------------------------------
-------------------------------------------------------------------------------S
---S-----------S---SSSS--------SS--------------SSS----S---------S----------S----
----------------------------------------------------------S---------------------
--S-----S---------------------S----S-------------------------------------------S
------------------S----------------S----------------------------S---------------
---S-------------------------SSSSS------S------S-------------------------S------
--------------------------S---------------S------------------S------------------
----------------S-----S---S--------S------S--------S----S-----S-S---
>forward_228
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TCATGCTTTCGGGATTTGCTAG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>reverse_1328
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CGCTTAAGTGATAAGGCGCC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>forward_1273
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------GCTGCTGCATCTAGAGAACAA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>reverse_2357
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------AGGCGTGTTAGCTAGCTGTT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>forward_1622
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--GTGGAGGAGGTGAGGAGGAG----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>reverse_3296
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GTTTGGCGTCTTGCTTGCTG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
