>input_sequence_41947
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-------------------------------------------------------ATGGCGCCGGTGGGTCTGCCGCCGG
GTTTCCGGTTCCACCCGACGGACGAGGAGCTGGTGAACTACTACCTGAAGCGCAAGATCCACGGGCTCCACATCGAGCTC
GACATCATCCCGGAGGTGGACCTCTACAAGTGCGAGCCCTGGGACCTCGCAGGTAC----AGTACGCACCACCGATCTCA
GTTCGCATGTGATCTCGATCGCGTATGTGTTGTGAACTGATGC--GAATTACAACGTACGTCCTCATGG--CGTGCAGAG
AAGTCGTTTTTGCCGAGCCGTGACCCGGAGTGGTACTTCTTCGGGCCGAGGGACCGCAAGTACCCCAACGGCTTCCGGAC
CAACCGGGCGACGCGGGCAGGGTACTGGAAGTCCACCGGCAAGGACCGGCGCGTCATGACGCAGCAGCACCACGGCGGCG
GAGGAGCCGGCGGGGGCGCGCGGGCAATCGGGATGAAGAAGACGCTGGTGTACTACCGCGGACGCGCGCCGCAGGGGGTG
CGCACCGACTGGGTGATGCACGAGTACCGCCTCGACGACAAGGACTCCGAGGACACCATCGCCATCCAGGTATGTATAAT
----CACCTTCATTCTCTGAGTGACCTATCCCGTCA--------TGCAAGGTGATCATGCATGCATGTCTAATCTTCTCC
TTCCATGGATGCAATGGAAAGCTATTTAGC--------------TAGGGCTTTGAGAAAAAATTGATCCTTTTCTTTTGT
GCT------------GGCCGGGCAAAGAAAATTTTCTGCTTGCGTCTAAAATGAAAGGAAGACGTAAAATTTTCTGAGAG
GATTACAACATGGCTTTTC-TCCCGTCTGTAAAACGGTGTGGTAGTA---------GTAT--------GGGTCACTTTGC
TTTGCTCCAGCTACTACTCTGATGAGAGAGACAAACATGTAGGCCTCGCCTTGCTGTCCAAAAAATTTAACTAACAAAAG
TAAAAGCCGGGGCCTTAGCATTAGTAGT----ATTTGTTCGTTCTCCAGCTACGTTCTTTGTTCTAAGATAAGAGTAGTA
CGTACTCTG-----CGTGTTAACCATGCATGCTACGCTACGTTCTCTCTTTTTTTG-GGG-TGAGATTAGAGCAGTCTGC
ACTGATCATGAGACGCTAAAGGGCCTTAACCAAAGCTAGAG----AGCAAAGCAAAGCAAGCCCTCATGCATCTTGGCGC
GAGATAGCAGCTCGTGTCGAGTCATGGCCATATGCATGTCGGCGTCCTCCCGCGCTTTCCGCTTTATTCCGTGCTGAATC
CCATCATCATCCTCACACCCTTCTGATTTTTCCATGGCCGGCTAGTCTTCTTATTTCTTCTCCCGCTTTGCTTTGATAAT
CGATCGGCCTCTTTTTCTGATTAACAATCAACAAGAATGTATACAACACTATGATGGCACTCTGATGGATCAAATTGCCC
AAAACCCAAGGCCTGTTGACTACTAATTGGCAGAAGTAACTGCACATGAGATAATCATGCATCAGTGTGTGCATAAACTT
TCAAGAAAGTCTCGAGAAACCACAATAGCAGATGGATCTTGTTTTTGCTTTTTCCTG-TCATGAGTTAATATACCATGCA
TGGTGGATGGATCAGGACACCTACGCGCTGTGCCGGGTCTTCAAGAAGAACGCCATCTGCGCCGAGGTGGAGGAGCTGCA
GGAGGGGCAGTGCAGCATGGCACTGCTCGAGGGCGCCTGCCAGCAGCTGCTCGCCAGCAGCCGCACTGCCGGACAGGAGT
ACTACCAGACCCCGTCGCCCGACGTGCCCGCAGGGTCCACCTCCTGCGGTGCTGACGCCGACGCAGACGACGACGCTGAC
AAGGACGACTCCTGGATGCAGTTCATCTCCGAGGACGCCTGGTGCTCCAGCACCGCCGCCGAGGAGAGCACCTCCTGCGC
CGGCTGA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>chr5D_1_TraesCS5D01G360700
ACTAACGCTAAGCTTAGCATCCAATGCTAAGCTTAGCAAAGTATGTTAAACTAATAGCTTGTGTGCCAATCTTTAATTTG
GATGATAAATTTAATATATTTAGTACCTTCAAGTGGTGCTAGAGGATATGGTAAAAAAAACACTTATCAAGGTGAATGAG
AGAGAAAGTTGACACACTTATCGAGGCTGGAAACTATAATTATTTATGGGGATGCGGATGATCTAAGAAATCGACCAATG
GCTCCACAATGCACATATATATTTTAA-----------------------------------------------------
--AAAATAAAATGTGTGTAAGTGGCATCTAAAATAACGGGGGCATGCTCAGCTTTTAACTCTCGGATCAAGAGAAAGATG
GTGTGTATACCGAGGCTATAGGTGTTTATAGGGTGTGGATGCTCAAACAATGTAGCAATGGCTTCACA--TTGTACATGT
ATAAACATGTGCTCAGCTTTCTAACTGTTGGACCGAGATTATGTAATATAATTATATAAACCATTTATTAAGGACTTGG-
--TTTTTTG-AAACCTCAATAAAGACATGACATATAGTGGACACTGTCTTAGTAGTTTTATTTCAGCAATGGAGTAATCT
AGTCACTCGCAAAAAAATTGATCCATTCACTTGCCAGGATGA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GAGAGAGAGAGAGAGAGAGAGAGTGTTACAC
GTCTAGAGAG--AGA----AATGAGGGGCGGTCG---GCCGTGTAAGGAAAAGGATGAAGCTTGCGAGGG-AATCTGCAA
AAGAGGAGGTAGCTAGCTAAAGGTGGCCCCCATCCGATCGATGAAAATCTCGAGGGGAGGACGACTACTGTGCCTCCTAC
CCCAGCCGACGACGATCGACCCAGAGG-------AAGAGAAAACCTACTTATAAGGGCAGCTGGCCGCCCGGTAAAGGCA
GCAGCAGCAGCCTCCTCCAACCAGCAGGAGCAGAGAAGAAGAAGCAAAGTGCGCGTCTTGCTCCTCCGCCGAAGCAGCTA
CCTACCAACCTAGCTGCTGCTGCT----------GCCGCCGTCGATCGCCGGGGTATGGCGCCGGTGGGTCTGCCGCCGG
GTTTCCGGTTCCACCCGACGGACGAGGAGCTGGTGAACTACTACCTGAAGCGCAAGATCCACGGGCTCCACATCGAGCTC
GACATCATCCCGGAGGTGGACCTCTACAAGTGCGAGCCCTGGGACCTCGCAGGTAC----AGTACGCACCACCGATCTCA
GTTCGCATGTGATCTCGATCGCGTATGTGTTGTGAACTGATGC--GAATTACAACGTACGTCCTCATGG--CGTGCAGAG
AAGTCGTTTTTGCCGAGCCGTGACCCGGAGTGGTACTTCTTCGGGCCGAGGGACCGCAAGTACCCCAACGGCTTCCGGAC
CAACCGGGCGACGCGGGCAGGGTACTGGAAGTCCACCGGCAAGGACCGGCGCGTCATGACGCAGCAGCACCACGGCGGCG
GAGGAGCCGGCGGGGGCGCGCGGGCAATCGGGATGAAGAAGACGCTGGTGTACTACCGCGGACGCGCGCCGCAGGGGGTG
CGCACCGACTGGGTGATGCACGAGTACCGCCTCGACGACAAGGACTCCGAGGACACCATCGCCATCCAGGTATGTATAAT
----CACCTTCATTCTCTGAGTGACCTATCCCGTCA--------TGCAAGGTGATCATGCATGCATGTCTAATCTTCTCC
TTCCATGGATGCAATGGAAAGCTATTTAGC--------------TAGGGCTTTGAGAAAAAATTGATCCTTTTCTTTTGT
GCT------------GGCCGGGCAAAGAAAATTTTCTGCTTGCGTCTAAAATGAAAGGAAGACGTAAAATTTTCTGAGAG
GATTACAACATGGCTTTTC-TCCCGTCTGTAAAACGGTGTGGTAGTA---------GTAT--------GGGTCACTTTGC
TTTGCTCCAGCTACTACTCTGATGAGAGAGACAAACATGTAGGCCTCGCCTTGCTGTCCAAAAAATTTAACTAACAAAAG
TAAAAGCCGGGGCCTTAGCATTAGTAGT----ATTTGTTCGTTCTCCAGCTACGTTCTTTGTTCTAAGATAAGAGTAGTA
CGTACTCTG-----CGTGTTAACCATGCATGCTACGCTACGTTCTCTCTTTTTTTG-GGG-TGAGATTAGAGCAGTCTGC
ACTGATCATGAGACGCTAAAGGGCCTTAACCAAAGCTAGAG----AGCAAAGCAAAGCAAGCCCTCATGCATCTTGGCGC
GAGATAGCAGCTCGTGTCGAGTCATGGCCATATGCATGTCGGCGTCCTCCCGCGCTTTCCGCTTTATTCCGTGCTGAATC
CCATCATCATCCTCACACCCTTCTGATTTTTCCATGGCCGGCTAGTCTTCTTATTTCTTCTCCCGCTTTGCTTTGATAAT
CGATCGGCCTCTTTTTCTGATTAACAATCAACAAGAATGTATACAACACTATGATGGCACTCTGATGGATCAAATTGCCC
AAAACCCAAGGCCTGTTGACTACTAATTGGCAGAAGTAACTGCACATGAGATAATCATGCATCAGTGTGTGCATAAACTT
TCAAGAAAGTCTCGAGAAACCACAATAGCAGATGGATCTTGTTTTTGCTTTTTCCTG-TCATGAGTTAATATACCATGCA
TGGTGGATGGATCAGGACACCTACGCGCTGTGCCGGGTCTTCAAGAAGAACGCCATCTGCGCCGAGGTGGAGGAGCTGCA
GGAGGGGCAGTGCAGCATGGCACTGCTCGAGGGCGCCTGCCAGCAGCTGCTCGCCAGCAGCCGCACTGCCGGACAGGAGT
ACTACCAGACCCCGTCGCCCGACGTGCCCGCAGGGTCCACCTCCTGCGGTGCTGACGCCGACGCAGACGACGACGCTGAC
AAGGACGACTCCTGGATGCAGTTCATCTCCGAGGACGCCTGGTGCTCCAGCACCGCCGCCGAGGAGAGCACCTCCTGCGC
CGGCTGATCATGCATGCGGCCGGAGAGCTTCTTCTGTCGGTGGAAATAATCCTCCTGATATATATACCTATATA---TTT
TTCCTTTTTCTTTTTGTGATCGGTGCTGCTGGCAATTTATCAATAATCACCGAGTGTTGAAGGTGAAAGATCAAGCAGTA
ATAAGGTATATATAATCCTTTTGGGTTCCATCTTCCAGCGTATTGCTGGGAGTTTGGGTAACCGATCGATCGATGCTGGC
CTCAAGGTGAAGGCTGTAATCCTTCCTGGAGTTGAGCTCATAAGGAGGATTTATATTTATAT--GATGATGATAGGAACA
ATCAGACTACATTTGTGTTTTTCT---TCTTCTGTTCATGCTTTCCTTGGTGTTCATATGTATTATTAAGCTTCTCGATT
GGAGG--CTTTTTTTTCTCCTCTTCCTGTGAAAAAAGAAAGAGTGAGGCTATGCCATTCCATAGCATATATAGTTGTTGT
GTGC---CTCCCTATATGTCAATAGAATTGAACAAAAATGTAACTGCTTGTACCTGACTGCTCAATTTGCATCAATCTGC
TCCAAACCTGGCACCTGGTTCTTATTGCCTCAGTAAATCCATTATTCGTATGTTTATCAATAAATAAGAAAATAAAATTG
CAACTAAATTATGATTTTTGGCAACCACATTTGTGCCGTA-ATTGTTTACATGTATTACTTTAGT---AAATAGGCCAAG
CATATAGATATGAAAAAACATTC-TTT-ATACTTCATGACTCATAAAATAGAAATCTCACAGTAAACCATTTTACTTTTT
TTAAATATATATCTTCAAATGCTGAAAATCTACCTTTT--TTA-GTATATCACATGCAAAGCACTATATCCTGTAAACAT
GGAAAATCCTATGCAACAGGTTCCGTTACATGCTTGGATTGCAAGGCATGCATCAGTACTGACGAAGAAGCTTAATTGAA
CACTTCTGTGCACCAAAGCGTTGAAGGAATACTATTCTAGATCAGAGGCTACCACATGCTGTTGCCAGT
>chr5B_1
ACTAACGCTAAGCTTAGCATCCAATGCTAAGCTTAGCAAAGTATGTTAAACTAATAGCTTGTGTGTCAATCTTTAATTTG
GATAATAAATTTAATATATTGAGTGCCTTCAAGTGGTGCTAGAGGATATGGTAAAAAAA-CACTTATCAAGGTGAATGAG
AGAGAAAGTTGACACACTTATCGAGGCTGAAAACTATAATTATTTATAGGGATGCGGATGATCTAAGAAATCGACCAATG
GCTCCACAATGCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT
ATAACATAAAATGTGTGTAAGTGGCATCTAAAATAACGGGGGAATGCTCAGCTTTTAACTCTTGGATCGAGAGAAAGATG
ATGCGTATACCGAGGCTATAGGTGTTTATAGGGTGCGGATGCTCAAACAATGTAGCAATGGCTTCACA--TTGTACATGT
ATAAACATGTCCTCAGCTTTTTAACTGTTGGGCCGAGATTATGTAATATAATTATATAAACCATTTATTAAGGACCTGGT
TTTTTTTTG-AAACCTCAATAAAGACATGACATATAGTGGACACTGTCTTAGTAGTTTTATTTCAGCAATGGAGTAATCT
AGTCACTCGCAAAAAAATTGATCCACTCACTTGCCAGGATGA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------G----------AGAGAGAGAGAGAGTTACAC
GTCTAGCTAG--AGAGAGAAATGAGGGGCGGTCG---GCCGTGTAAGGAAAAGGATGAAGCTTGCGA-GG-AATCTGGAA
AAGAGGAGGTAGCTAGCTAAAGGTGGCCCCCATCCGATCGATGGAAATCTCGAGGGGAGGACGACTACTGTGCCTCCTAC
CCCAGCCGACGACGATCGACCCAGAAGCCAGAACAAGAGAAAACCTACTTATAAGGGCAGCTGGCCGCTCGGTAAAG---
---GCAGCAGCCTCCTCCAACCAGCAGGAGCAGAGAAGAAGAAGCAAAGTGCGCGTCTTGCTCTTCCGCCGAAGCAGCTA
CCAACCTAGCTGCCGCAGTCCGGAGCACGCAGACGCCGTCGTCGATCGCCGGGGTATGGCGCCGGTGGGTCTGCCGCCGG
GTTTCCGGTTCCACCCGACAGACGAGGAGCTGGTGAACTACTACCTGAAGCGCAAGATCCACGGGCTCCACATCGAGCTC
GACATCATCCCGGAGGTGGACCTCTACAAGTGCGAGCCCTGGGATCTCGCAGGTACGTGCAGTACGCACCACCGATCTCA
GTTCGCATGTGATCTCGATCGCGTATGTGTTGTGAACTGATGC--GAATTACAACGTACGTCCTCATGG--CGTGCAGAG
AAGTCGTTTTTGCCAAGCCGTGACCCGGAGTGGTACTTCTTCGGGCCGAGGGACCGCAAATACCCCAACGGCTTCCGGAC
CAACCGGGCGACGAGGGCAGGGTACTGGAAGTCCACCGGCAAGGACCGGCGCGTCATGACGCAGCAGCACCACGGCGGCG
GAGGAGCCGGCGGCGGCGCACGGGCCATCGGGATGAAGAAGACGTTGGTGTACTACCGCGGGCGCGCGCCACAGGGGGTG
CGCACCGACTGGGTCATGCACGAGTACCGCCTCGACGACAAGGACTCCGAGGACACCATCGCCATCCAGGTATGTATAAT
TAATCACCTTCGTTCTCTCTAGCTATATCATATCTCTCGTCATGTGCATGGTGATCG---------------TCATCTC-
--CTATGCACGGAAAATTAGGGTTCTTTTTTAGGAATTGGAAGTTAGGGCTTTGAGAAAATTTTGATCCTTTTCTTTTGT
GCT------------GGCTGGGCAAAGAAAATTTTCTGCTTGCGTCCCAAATGAAAGGCATA---AAAATTTTCTGAGGG
GATTAAAACATGGCTTTCTATCACGTCTGTAAAACGGTACGAGTGCTGGTAGTAGCGTAT--------GGGTCACTTTGC
TTTCATCCAGCTATACTCTGAT-----GAGACAAACATGTAGGCCTCGCCTTGCTGTCCAAAAAGTTTAACTATCAAAAG
TAAAAGCCGGGGCCTTAG------TAGT----ATTTGTTCGTTCTCCAGCTACGCTCTTTGTTCTAAGATAAGAGTAGTA
CGTACTCTG-----CGTGTTAACCATGCATGCTACGCTACGTTCTCTCTTTTTTTTTGGG-TGAGATTAGAGCAGTGTGC
ACTGATCATGAGACACTAAAGGGCCTTAGCCAAAGCTAGAG----AGCAAAGCAAAGCAAGCCCTCATGCATCTTGGCGC
GAGATAGCAGCTCGT-----GTCATGGCCATATGCATGTCGGCGTCCTCCCGCGCTTTCCGCTTTATTCCGTGCTGAATC
CCATCATCATCCTCGCACCCTTCTGATTCTTCCATGGCCGG-TAGTCTTCTTATTTCTTCTCCCGCTTTGCTTTGATCAT
CGATCGGCCTC-TTTTCTGATTAACAATCAACAAGAATGTATACAACACTATGATGGCACTCTGATGGATCAAATTGCCC
AAAACCCAAGGCCTGTTGACTACTAATTGGCAGAAGTAACTGCACATGAGATAATCATACATCAGTGTGTGCATAAACTT
TCAGGAAAGACTTGAGAACCCACAATAGCGGATGGATCTTGTTTTTGCTTTTTTCCTATCATGAGTTAATATACCATGCA
TGGTGGATGGATCAGGACACGTACGCGCTGTGCCGGGTCTTCAAGAAGAACGCCATCTGCGCCGAGGTGGAGGAGCTGCA
GGAGGGGCAGTGCAGCATGGCACTGCTCGAGGGCGCCTGCCAGCAGCTGCTCGCCGGCAGCCGCACGACGGGCCAGGAGT
ACTACCAGACGCCGTCGCCGGACGTGCCCGCAGGGTCCACCTCCGGCGGTGCTGACGCCGACGCAGACGACGACGCGGAC
AAGGACGACTCCTGGATGCAGTTCATCTCCGAGGACGCCTGGTGCTCCAGCACCGCCGCCGAGGAGAGCACCTCCTGCGC
CGGCTGATCATGCATGCGGCCGGAGAGCTTCTTCTGTCGGTGGAAATAATCCTCCTGATA--TATACCTATATA---TTT
TTCCTTTTTCTTTTTGTGATCGGTGCTGCTGGCAATTTATCAATAATCACCGAGCGTTGAAGGTGGAAGATTAAGCAGTA
ATAAGGTATATATAATCCTTTTGGGTTCCATCTTCCAGCGTATTGCTGGGAGTTTGGGTAACCGATTGATCGATGCTGGC
CTCAAGGTGAAGGCTGTAATCCTTCCTGGAGTTGAGCTCATAAGGAGGATTTATATTTATATATGATGATGATAGGAACA
ATCAGACTACATTCGTGTTTTTCTTCTTCTTATGTTCATGCTTTCCTTGGTGTTCATATGTATTATTATGCTTCTCCACT
GGAGG--CTTTTTTTTCTCCTCTTCCTGTGAAAAA-GAAAGAGTGAGGCTATGCCATTCCATAGCATATATAGTTGTTGT
GTGTCGTCTCCCTGTATGTCAATAGAATTGAACAAAAATGTAACTGTTTGTGCCTGCCTGCTCAATTTGCATCAATCTGC
TCCAAACCTGGCACCTGGTTCTTATTGCCTGAGTAAATTCATCATTCATCTGTTGATCAATAAATAAGAAAATAAAATTG
CAACTACAGTATAATTTTTCGCAACCAAATTTGTATCATACATTGTTTACATATATATTTCATAAGAAAAATAGACCAAG
CATATAGATATGAAAAAACATTCTTTT-ATACTTCATGACTCATAAAATAGATATTTCACCGTGAACCATTTTACTATTT
TTAAAC--ATATCTTCGTATGCTGAAAACCTACCTTTT--TTCTGTACATCACATGCAAAGAACC--ATCCTATAAACAT
GGAAAATCCTATACAGCAGGTTCCATTGCATGCTTGGATTGCAAGGCATGCATCAGTGCTGACGAAGAAGCTTAATTGAA
CACTTCTGTGAACAAAAGCGTTGAAGGAATACTATTCCAGATCAGGGGTTACCACATGCTGTTACCAGT
>chr5A_1
ACTAACGCTAAGCTTAGCACCCAATGCTAAGCTTAGCAAAGTATGTTAAACTAATAGCTTGTGTGCCAATCTTTAATTTG
AATGATAAATTTAATATATTTAGCACCTTCAAGTGGTGCTAGAGGATATGGTAAAAAAAACACTTATCGAGGTGAATGAG
AGAGAAAGTTGACACACTTATCAAGGCTGAAATCTATAATTATTTATAAAGATGCGGATGATCTAAGAAATCGACCAGTG
GCCCCACAATGCACATATATATTTAAA-----------------------------------------------------
--AACATAAAATGTGTGTAAGTGACATCTAAATTAACGGGGGCATGTTCAGCTTTTAACTCTCGAATCGAGAGAAAGATG
GTGTGTTTACCGAGGCTATAGGTGTTTATAGGGTGTGGATGCTCAAACAATGTAGCAATGGCTTCACACATTGTACATGT
ATAAACATGTACTCAGCTTGTTAACTGTTGGACCGAGATTATGTAATATAATTATATAAACCATTTATTAAAGACTTGA-
--TATTTTGAAAACCTCAATAAAGACATGACATATAGTGGACACTGTCTTGGTAGTTTTATTTCAGCAATGGAGTAATCT
AGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGGG----------AGAGAGAGAGAGAGTTACAC
GTCTAGACTCTAAGAGAGAAATGAGGGGCGGTCGGGCGCCGTGTAAGGAAAAGGATGAAGCTTGCGA-GGGAATCTGGAA
AAGAGGAGGTAGCTAG-TAAAGGTGGCTCCCATCCGATCGATGAAAATCTCGAGGGGAGGACGACTAGTGTGCCTCCTAC
CCCAGCCGACGACGATCGACCCAGAGG-------AAGAGAAAACCTACTTATAAGGGCAGCTAGCCGCCCGGTAAAGGCA
GCAGCAGCACCCTCCTCCAACCAGCAGGAGCAGAGAAGAAGAAGCAAAGTGCGCGTCTTGCTCCTTGGCCGAAGCAGCTA
CCAACCTAGCTGCCGCAGCCCGGAGCACGCAGACGCCGTCGTCGATCGCCGGGGTATGGCGCCGGTGGGTCTGCCGCC-G
GTTTCCGGTTCCACCCGACGGACGAGGAGCTGGTGAACTACTACCTGAAGCGCAAGATCCACGGGCTCCACATCGAGCTC
GACATCATCCCGGAGGTGGACCTCTACAAGTGCGAGCCATGGGACCTCGCAGGTATGATCGAT---------CGATTTGA
ATTCGCATGTGATCTCGCCTAC---------GTGAACTGATTGATGAATTACACCATCCGTCCTCATGGCGCGTGCAGAG
AAGTCGTTGTTGCCGAGCCGTGACCCGGAGTGGTACTTCTTCGGGCCGAGGGACCGCAAGTACCCCAACGGCTTCCGGAC
CAACCGGGCGACGCGGGCAGGGTACTGGAAGTCCACCGGCAAGGACCGGCGCGTCATGACGCAGCAGCACCACGGCGGCG
GAGGAGCCGGCGGCGGCGCCCGGGCAATCGGGATGAAGAAGACGCTGGTATACTACCGCGGACGCGCGCCGCAGGGGGTG
CGCACCGATTGGGTGATGCACGAGTACCGCCTCGACGACAAGGACTCCGAGGACACCATCGCCATCCAGGTACGTATAAT
TGATCACCTTCGTTCTCTCTAGCTATATCATATCTCTCGTCATGAGCATGCTGATCG---------------TCATCTCC
TTCTATGCATGGAAAATTAGGGTTCTTTTTTAGGAATTGGAAGTTAGGGCTTTGAGAAAATTTTGATCCTTTTCTTTTGT
GCTGGCCGGCCGGCCGGCCGGGCAAAGAAAATTT-CTGCTTGCATCCCAAATGGAAGGCGTA---AAAATTTCCTGAGAG
GATTAAAACATGGCTTTCTATCACGTCTGTAAAACGGTACGAGTACTGGTAGTAGCTAAGTATGGGTCGGGTCACTTTGC
TTTCATCCAGCT-------GAT-----GAGACAAACATGTAGGCCTCGCCTCGCTGTCCAAAAAATTCAACTAACAAAAG
TAAAAGCCGGGGCCTTAGCATTAGTAGTATTAATTTGTTCTTTCTCCAGCGACGTTCTTTGTTCTAAG---AGAGTAGTA
CGTACTCTACTCTACGTGTTAACCATGCATGCTGCGCTGCGTTCTCTTTATTTTGGTGAGATGAGATTAGAGCAGTCTGC
ACTGATCATGAGGCACTAAAGGGCCTTAACCAAAGCTACAGAGCAAGCAAAGCAAAGCAAGCCCTCATGCATCTTGGCGC
GAGATAGCAGCTCGT-----GTCATGGCCATATGCATGTCGGCGTCCTCCCGCGCTTTCCGCTTTATTCCGTGCTGAATC
CCATCATCATCCTCGCACCCTTCTGATTCTTCCATGGCCGGCTAGTCTTCTTATTTCTTCTCCCGCTTTGCTTTGATCAT
CGATCGGCCTC-TTTTCTGATTAACAATCAACAAGAATGTATACAACCCTATGATGGCACTCTGATGGGTCAAATTGCCC
AAAACCCAAGGCCTATTGACTAGTAATTGGCAGAAGTAACTGCACATGAGATAATCATGCATCAGTGTGTGCATAAACTT
TCAGAAAAGACTTGAGAAACCACAATAGCAGATGGATCTTGTTTTTGCTTTTT-CCTATCATGAGTTAATATACCATGCA
TGGTGGATGGATCAGGATACCTACGCGCTGTGCCGGGTCTTCAAGAAGAACGCCATCTGCGCCGAGGTGGAGGAGCTGCA
GGAGGGGCAGTGCAGCATGGCACTGCTCGAGGGCGCCTGCCAGCAGCTGCTCGCCAGCAGCCGCACTGCCGGACAGGAGT
ACTACCAGACCCCGTCGCCCGACGTGCCCGCAGGGTCCACCTCCGGCGGTGCTGACGCCGACGCAGACGACGAGGCAGAC
AAGGACGACTCCTGGATGCAGTTCATCTCCGAGGACGCCTGGTGCTCCAGCACCGCCGACGAGGAGAGCACCTCCTGCGC
CGGCTGATCATGCATGCGGCCGGAGAGCTTCTTCTGTCGGTGGAAATAATCCTCCTGATA--TATATACCTATATATTTT
TTCCTTTTTCTTTTTATGATCGGTGCTGCTGGCAATTTATCAATAATCACCGAGTGTTGAAGGTGAAAGATTAAGCAGTA
ATAAGGTATATATAATCCTTTTGGGTTCCATCTTCCAGCGTATTGCTGGGAGTTTGGGTAACCGATCGATCGATGCTGGC
CTCAAGGTGAAGGCTGTAATCCTTCCTGGAGATGAACTCATAAGGAGGATTTATATTTA--TATGATGATGATAGGAACA
ATCAGACTTCATTTGTGTTTTCTTCG-TCTTCTGTTCATGCTTTCCTTGGTGTTCATATGTATTATTATGCTTCTCGATT
GGAGGCTCTTTTTTTTCTCCTCTTGCTGTGAAAAAAGAAAGAGTGAGGCTATGCCATTCCATAGCATACATAGTTGTTGT
GTGC---CTCCGTGTATGTCAATAGAATTGAACAAAAATGTAACTGTTTGTACCTGCCTGCTCAATTTGCATATATCTGC
TCCAAACCTGGCACCTGGTTCTTATTGCCTGAGTAAATCCGTCATTCATTTGTTGATCAATAAATAAGAAAATAAAATTG
CAACTAAAGTATGAT-TTTGGCAACCAAATTTGTACCGTACATTGTTTACATATATATTACATAAGTAAAATAGACCAAG
CATATAGATATGAAAAAACATTT-TTTCATACTTCTTGAATCATAAAATAGATATCTCACAGTAAACCATTTTACTTTCT
TTAAAT--GTATCTTCAAATGCTGAAAACCTACCTTTTCTTTA-GAATATCACATGCAAAGCACTATATCCTGTAAACAT
GGAAAATCCTATGCAGCAGGATCCGTTACATGCTTGGATTGCAAGGCATGCATCAGTACTGACGAAGAAGCTTAATTGAA
CACTTCTGTGCACAAAAACGTTGAAGAAATACTATTCTAGATCAGAGGTTACCACATGCTGTTACCAGT
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S-----------------S--------------------------------
------------------------S-------------------------------------------------------
----S---------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
----------S---------S-----------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------SSSSSSSSSS------------S-------
-------S-----------------------------------------------------------S---------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S---S-S--SS-SSSSS-S-SS--------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S-----S------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S------SSSSSSSSSSSSSSSSSS------------S-------SSSSSSSSSSSSSSSS--S-----
---S---S---S--SSSS-S-S-SS--SSS------------------------------SS------------------
----------------------------------------------SS----------S-S-SSS---------------
-----S-----------SS---S---------------SS-SSS-SS---------------------------------
---SS--------SSSSSSSSSSSSSS-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
---------------SSSSS------------------------------------------------------------
--------------S-------------S------------------------------------------------S--
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
---S-----S--S----------------------------------------S-SS-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-------------------------------S---
--------------------------------------------------------------------------------
------------------------------------------------------------SS------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
-------------S--------------------------------S---------S-----------------------
------------------------------S-----------S----S-S----S-------------------------
--------S------------------S------S-----------------S---SSS-SSSSS---------S-----
----------------------------------------------------S---------------------------
------SS--------------------S---------------------------------------------------
---------------S----------------------------------------------------------------
-------------S----------------------------------S--------------S-----
>forward_1379
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
CCTACCAACCTAGCTGCTG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>reverse_2657
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TCGAGTCATGGCCATATGCA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>forward_2057
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CCCGTCATGCAAGGTGATCA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>reverse_3749
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------AGCTTCTCGATT
GGAGGCTT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
