>input_sequence_41913
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATGG---CGTCGGCGGCGCCCGCCGCCGCACCCGGGCGGC
CCCACCCGACCTACACCAACGCAAGCTCCCTCCCACCTTTCC------------------------------TTCCTTTG
TCCTCCAATCTCGCTCCCCTCCCCGCTCATGGATAA---------GATGGATCTTGCTTT--------TCTTGCAGATGA
TTACTTACGCGCTCGCCCAGCTGGGAGGCGCCTCCGCCCGCTCCGCCATCGCCGGATTCATCGCCGCACGCTTCACCGGG
CTCCCCGTCAGCCACGACGCGCTCCTCTCCGCCCACCTCCGCCGCCTCGTCGCCGAGGGTGTCCTCTGCACCTCCGG---
ATTCTCCTACTTGTTCTCTTCCCACCACCA---------GCCACCCGAGAGTA------ACAGTCCCGATCTCGATTCGG
ATGATCAATCTG------GTTCTGGGTTCCACTTCCACCTCCA---------------CAGTAGCAGTGACGACGACGAC
GACGA---CGATGATGCCTACACTCCTCTGCTGCATCTGCATCTGCCTCTGCCTCTGCCTGTGCCTGTGC------CTGT
GCTGGGAGAGAAGCGGGGCCGGGGGCGACCGCGGAATAGTTCCCCGGCGAATGCTGCCGGCCGTCCTCGCAAGGCTGCTG
CTGCAACGCCTGGAGAACCCTGTCCTGCTCCTGCAAAGGGAGAGCCAAC---AGAGCATTCTGGTGCTGGTTTA------
---GGGTCTGTGCTGCTGTCTGGGAAACCA------------------AAGCGAGGCCGTGGGAGACCAAGGAAGCTACA
GCGAGTTGG---GCCGTCCCCCTCAACTGGTGGTGGTGGTGGTGGTGGTCGTATCAAGAGAGGGCCTGGGAGGCCGACAA
AGGAGGACCAACAATCACAAGCAGCAGCAGCAAAGCATCCTCCAACTCCAACTGCGTCATCAACCAGTGGCATCGCCAAG
ATCAAGAGAGGGCCTGGGAGGCCAAGAAAGGAGGAGCAACAATCACAGGCAGCAGCAGCAGCAGCACAGCATCCTCCAAC
TCCAACTGCGTCGTCAACCGGTGGCATCGCCAAGATCAAGAGAGGGCCTGGGAGGCCAAGAAAGGAGGAGCAACAATCAC
AGGCAGCAGCAGCAGCAGCAGCAGCACAGCATCCTCCAACTCCAACTGCGTCGTCAACCGGTGGCATCGCCAAGATCAAG
AGAGGGCCTGGGAGGCCAAGAAAGGAGGAGCAACAATCACAAGCAGCAGCAGCACAGCATCCTCCAACTCCAACTGCGTC
GTCAACTGGTGGCATCATCAAGATCAAGAGAGGGCGTGGGAGGCCGAGAAAGGAGGAGGAG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CAACAATCACAGGAAGCAACAATGCCTCTTCCAACTCCAC
CGGCATCAAGGGGGT------TCAAGGTAGGATGTGGGAGACCAATGCTAGCTCCTACATCTCATCTGGAGACACACGGA
GGGCCTCCCAGGAATC------GGAGGCCAATAATAATAGAGAAGCTGCCACCAGCA---GC---AAGGTGGTC---TGT
TGATGCTATGCCGTCAGAAATCAA------------GAGGCCAAGAATCTACAGACCATCAGC---AGAAACTGGAGATG
CAACACGTGCTCCTG---AAACTGTAGATG--------------------------------------------------
-------------------------------------------------CTGCGTCGTCCGGAATCAAGATAGAGG----
--------GCGTGCAGCCAC------------------------------------------------------------
------------AAGTGGACAAGCCAACGGCACCAATGCCTGCTGAAGCTGGGGATGCTCGGTCTGCA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GGGATCAAGAGAGGGCGTGGGAGGCCAAGAAAAGACAAGCCAGCAG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------CAGCAGCAGCAGCAATGTTGGCTCAAACTGAAGCTG
TAGATGCTGTGTCAACTGGGATGAAGGGGGCGCTTGAGAATCCAATATCAGGTTATGTCGTGTCAACTGGAACCAAGGGA
GCACTTGAGAAGCCAT------CATCGGCAGGTGATATTGTGTCGGTGGTGATG------AAGAGAGGGCGTGGGAGGCC
AAGGAAAGAGCAACTGACCTT----TGATTGA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr1A_1_TraesCS1A01G446000
TTACTCAGAGAAAGGGGTCGCCACCCTTTAATACATCAGATTAAACTACTTTGGCGACGTGCACCGACATTGACTAAATT
AAACATAATTTATACATAAATGGTCGGTCAAACGCCGATCAAAGTCCACTTAAACATAACCAAAATTTTAAAAACTCTAA
TAAATGTCTACGCACCGCCCTAGTAGACAGCTGTCGCCGCCGTCGGTGAGGCCGATGAAGACGGGAGGTGACCCAGCCTA
TTCGAAACCGCCTTGATAGGCCGCCGGGGCAGCTTCCTCCGACGTCTGCTGCGGCGACGACGGCATTGCGGTGAAGTAGC
AGGGAGCCGCCGCCTCCTTTTCCGGCGTGGAGGCGAAGTAGGAGGGAGGCGCGCTCACCCACTCGCGAAGTTGGCTGGTC
CACGAATAGAATTCCTCGGGCCGGCGAAGTAGATGGAGAGGTTTTTGTAGAGAGAGAAAATAGGAGAATTTTTTTGAGAC
AAAAGAGAAAATAGGAGATGAGAGAGAAAGTAGTAAATGGTGGTCCCATCCATCCATCCATCCGGCCCAGCAATTGCAAA
GCTTCCTTCCTTCCTATTATTTAACCCAAAAAATCAGTAGTGCAGGTCCATGAATGAATGAATCCCACCACCCACGCTCC
CTTTTCCTATACCTACCTATAGCCTATAGGAGGAGGAAGAGCACCCCTTCCCTCAAAAAAAAAAAAAACCCTATAGGAGG
AGGAGCAGGAGGAGGCGGAGGACTCCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGAAGCAGAAGCAGAAGCAGAAGCAGAGGACGGACGGACAATGG---CGTCGGCGGCGCCCGCCGCCGCACCCGGGCGGC
CCCACCCGACCTACACCAACGCAAGCTCCCTCCCACCTTTCC------------------------------TTCCTTTG
TCCTCCAATCTCGCTCCCCTCCCCGCTCATGGATAA---------GATGGATCTTGCTTT--------TCTTGCAGATGA
TTACTTACGCGCTCGCCCAGCTGGGAGGCGCCTCCGCCCGCTCCGCCATCGCCGGATTCATCGCCGCACGCTTCACCGGG
CTCCCCGTCAGCCACGACGCGCTCCTCTCCGCCCACCTCCGCCGCCTCGTCGCCGAGGGTGTCCTCTGCACCTCCGG---
ATTCTCCTACTTGTTCTCTTCCCACCACCA---------GCCACCCGAGAGTA------ACAGTCCCGATCTCGATTCGG
ATGATCAATCTG------GTTCTGGGTTCCACTTCCACCTCCA---------------CAGTAGCAGTGACGACGACGAC
GACGA---CGATGATGCCTACACTCCTCTGCTGCATCTGCATCTGCCTCTGCCTCTGCCTGTGCCTGTGC------CTGT
GCTGGGAGAGAAGCGGGGCCGGGGGCGACCGCGGAATAGTTCCCCGGCGAATGCTGCCGGCCGTCCTCGCAAGGCTGCTG
CTGCAACGCCTGGAGAACCCTGTCCTGCTCCTGCAAAGGGAGAGCCAAC---AGAGCATTCTGGTGCTGGTTTA------
---GGGTCTGTGCTGCTGTCTGGGAAACCA------------------AAGCGAGGCCGTGGGAGACCAAGGAAGCTACA
GCGAGTTGG---GCCGTCCCCCTCAACTGGTGGTGGTGGTGGTGGTGGTCGTATCAAGAGAGGGCCTGGGAGGCCGACAA
AGGAGGACCAACAATCACAAGCAGCAGCAGCAAAGCATCCTCCAACTCCAACTGCGTCATCAACCAGTGGCATCGCCAAG
ATCAAGAGAGGGCCTGGGAGGCCAAGAAAGGAGGAGCAACAATCACAGGCAGCAGCAGCAGCAGCACAGCATCCTCCAAC
TCCAACTGCGTCGTCAACCGGTGGCATCGCCAAGATCAAGAGAGGGCCTGGGAGGCCAAGAAAGGAGGAGCAACAATCAC
AGGCAGCAGCAGCAGCAGCAGCAGCACAGCATCCTCCAACTCCAACTGCGTCGTCAACCGGTGGCATCGCCAAGATCAAG
AGAGGGCCTGGGAGGCCAAGAAAGGAGGAGCAACAATCACAAGCAGCAGCAGCACAGCATCCTCCAACTCCAACTGCGTC
GTCAACTGGTGGCATCATCAAGATCAAGAGAGGGCGTGGGAGGCCGAGAAAGGAGGAGGAG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CAACAATCACAGGAAGCAACAATGCCTCTTCCAACTCCAC
CGGCATCAAGGGGGT------TCAAGGTAGGATGTGGGAGACCAATGCTAGCTCCTACATCTCATCTGGAGACACACGGA
GGGCCTCCCAGGAATC------GGAGGCCAATAATAATAGAGAAGCTGCCACCAGCA---GC---AAGGTGGTC---TGT
TGATGCTATGCCGTCAGAAATCAA------------GAGGCCAAGAATCTACAGACCATCAGC---AGAAACTGGAGATG
CAACACGTGCTCCTG---AAACTGTAGATG--------------------------------------------------
-------------------------------------------------CTGCGTCGTCCGGAATCAAGATAGAGG----
--------GCGTGCAGCCAC------------------------------------------------------------
------------AAGTGGACAAGCCAACGGCACCAATGCCTGCTGAAGCTGGGGATGCTCGGTCTGCA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GGGATCAAGAGAGGGCGTGGGAGGCCAAGAAAAGACAAGCCAGCAG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------CAGCAGCAGCAGCAATGTTGGCTCAAACTGAAGCTG
TAGATGCTGTGTCAACTGGGATGAAGGGGGCGCTTGAGAATCCAATATCAGGTTATGTCGTGTCAACTGGAACCAAGGGA
GCACTTGAGAAGCCAT------CATCGGCAGGTGATATTGTGTCGGTGGTGATG------AAGAGAGGGCGTGGGAGGCC
AAGGAAAGAGCAACTGACCTT----TGATTGAAACCAGGCCTGGTTTGGAGACATGTCTGAAGAAGCTAGTCCAAATCTG
TTTCTCGTATACAAGAAGGGGGTAGGAAACCAGAG-----CTGAAGATGCATGCTGGATGTGTGATCTGAGTCTAATCT-
-------------------GCGAGTGCTCGATTGGTTGATGCATGTAAGCTAAGCCGCCTTCCTTAATTCTTATGATGTA
----TCTATATTTTGTGTCAGATCACATATA-TATAATAAGTAGTAATGCTGTTGCTATTTTCTACAGTAATAACAGTAA
TTCTTAGTCGCATGAAATAATTAATTATTATTTTTCTTTGCGTCAAACAAAGCTAGACTTGAAATTTCGAAGTGAGACAT
ACATAGTAGAATGGGCAAA----TAATGAAAAACATGCTTGAATGGTGAAACATTACACATTATATTAACTGAATTTGAG
TGGCTTCGACTCGAGATCCTTGTCTTAAAATGGCTGCCACATTGTATTTGGAAGAAGGATTTTGTTTGCAGTTTGTGATG
TAGCCTTGCTTCCCCTCTTTTGCTTTGTCTAGAGTTTAGATCATAGATCATAAGATGGAAAGACGAGGGGTCACCGCGAA
CCAGATGGATGGATTGACGGGGGAATGATCCCAAATCAAATCACAAGATTACAACAGCACCTAGAAGATAGTGATAGTCA
GTCAGTCCTAGGGATGGAGGATGATTTCGTTATCTTGTACTACAGTCGGAGTCGTTAGTCCTAGTGTCTGAGGATTAATC
TGAAGCAACTAAGCAAGCCATCTCCATCCCTGAAGCTCTGTCTGAGGATTACTGAAGAAATTGGACACTTTCACTGTTCA
AGCTGAGCTTCCCCTGTTTTTCTATGTGTTTCATCTCTGAATCTCTCTCTCGCTCTCTCTTCTCTGAATTCCCTCTTTGC
CAGGCGCTACCTATAGTTTTGCACCACCAGACGATCATTTGAATGGTTTCTGTAGCCGGTTTTGCATACGTGGCTCAGGC
CGATTGCCATGTCGCCTTAGTGGACG
>chr1D_980
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------GAAGCAGAGGACGGACGGACAATGGCGTCGGCGGCGCCGCCCGCCGCCGCACCCGGCCGCC
CCCATCCGACCTACACCAACGCAAGCTCCCTCTCCTCTCCTCTCCTCTCCTTGGAG-GTGTCGCTAACACCTTTCCTTTG
CTCTCCAATCTCGCTTCCCTCCCCGCTGAC-----A---------GATAGATCTTGCTACTTTTTCTATCTTGCAGATGA
TTACTTACGCGCTCGCCCAGCTGGGAGGCGCCTCCGCCCGCTCCGCCATCGCCGGATTCATCGCCGCGCGCTTCACCGGC
CTCCCCGTCAGCCACGACGCGCTCCTCTCCGCCCACCTCCGCCGCCTCGTCGCCGAGGGCCTCCTCTGCACCTCCGG---
ATTCTCCTACTTCTTCTCCTCCCACCACTCGCCGACCAGGCCACCGGAGAGTA------ACAGTCCCGATTCCGATTCGG
ATGATCCATCAACTGGGAGG------------TTCCACTTCCTCCAGAGTAGCAGTAGCAGTAGCAGTGAGGAGGAGGAG
GACGA---AGATGATGCTGCCTACAC------------------GCCTCTGCCTGTGCATGTGCATGTGCCTGTTCCTGT
GCTGGGAGAGAAGCGGGGCCGGGGCCGCCCGCGGAAGAAGGTTGTGGTTATGCTGTCTGCTCACACCACCA---CTGCTG
CTGCAACGCCTGGAGAACCCTGTCCTGCTCCTGCTCCTGCTCCTGTAAAGGGAGAGCATTCTGGTGCTGCTGCAAAGGGA
AAGGGGTCTGTGCTATCTCTATCTGGGGATGCAGCTTACTCGGTGACTAAGCGAGGCCGTGGGAGACCAAGGAAGCTACA
CCAAGTTGCGCCGCCGTCCCCCTCACCCTCACCCTCACCCTC--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------ACCCTCACCGGGAGCAGGAGATGATCCAC-------------
-----------CGTCAACCGGTGGCATCATCAAGA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TCAAGATCAAGAGAGGGCGTGGGAGGCCGAGAAAGGAGGACCAACAATCAAGATCACAGGAAG
CAACAACAAAGACTCTTCCAACTCCA------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
CTGCGTCAAGGCGGCGGGGGATCAAGGTAGGGTGTGGGAGACCAATGCTAGCTCCTACA---------------------
GGGCCTCCTGGGAGTT------GGAGGCCACTAATAATAGACAAGCACCCACCAGAAACTGCAGCAAGGTGCTCTGTTGT
TGATGCTACGCCGTCGGTAATCAAGAGACCGCGCGGGAGGCCAAGAATGTACAGACCATCCGCTCCTGAAACTGGAGATG
CAGCACCTGCTCCTC---AAACTGGAGATGCTGCATTGATGGGAGTCAAGAGAGCAGCTCATGGTTGGCCAATAAAGGAG
AACCCAGCAGCAGCAGCAGCAGCAGCAATGTCTGGTGAAACTGGAAATGCTGCATCGGCCGGAATCAAGATAGGGG----
--------AAGTGGAGAATCCAACAGCAGCAATATCTGCTGAAGCCGGGGATGTTGGGTCAACGGGAATCAAGAGAGGGG
GTGAGCAACTAGAAGTGGAAATGCCAGCAGCAGCAAGGCCCGCTGAAGCTGGAGATGCAAC-------------------
--------------------------------------------------------------------------------
------------------------------------------------------GCCTGCTGAATTAACTGGAGGTGCTG
CGTCAACGGGGATCAAGAGAGGGCGTGGGAGGCCAAGAAAGGACAAGACAGCAG--------------------------
-------------------------------------------------CAGCAGCAGCAATGCCTGCTGACGCTGGGTC
TGCGGGGATCAAGAGAGGGCGTGGGAGGCCAGGAAAAGAGAAGCCAGCAGCAGCAGACTTGTTGGCTGAAACTGAAGCTG
GAGATGCCGTGTCAACTGGGATGAAGGGGGCGCTTGAGAATCCAATATCAGGTTATGTCGTGTCAACTGGAAGCAAGGAA
GCACTT---AGAACGGAGAAGCCATCGACAGGTGATTTTGTGTCGATGGTAATGAAGAGAAAGAGAGGGCGTGGGAGGCC
AAGGAAAGAGCAGCTGGCCTTCCTTTGATTGAAACCAGGCCTGGTTTGGAGA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr1B_1008
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CGGCGCCGCCCGCCGCCGCACCCGACCGCC
CCCACCCGACCTACACCAACGCAAGCTCCCTCTCCTCTCCTCTCCTCTCGTCTGCTTGTGTCGCTAACACCTTTTCTT--
-TCTCCAATCTCGCTTCCCTCCCCGCTGAATCTGATAGATGGATGGATGGATCTTGC--T--------TCTTGCAGATGA
TTACTTACGCGCTGGCGGAGCTGGGAGGCGCCTCCGACCGCTCCGCCATCGCCGGATTCATCGCCGCGCGCTTCACCGGC
CTCCCCGTCAGCCACGACGCGCTCCTCTCCGCCCACCTCCGCCGCCTCGTCACCCAGGGCGTCCTCTGCACCTCCGGATT
ATTCTCCTACTTCTTCTCCTCCGACCACCACCACCACTCGCCCACCACTAGGAGGCCACACAGTCCCGATCTCGATTCCG
ATGATCAGTCTG------GG------------TTCCACTTCCA---------------GAGTAGCAGTGAGGAGGAGGAG
GACGACGAAGATGATGCTGCCTACAC------------------TCCTCTGC------ATGTGCCTGTTCCTGTTCATGT
TCTGGGAGAGAAGCGAGGCCGGGGGCGCCCGCGGAAGAAGGTTGTGGTTATGCTGTCTGCTCACACCACCA---CTGCTG
CAGCAACGCCTGAACCCTG---------TCTTGCAAAGGGAGAGCAAAC---ACAGCATTCTGCTGCTGCTA--------
----GGTCTGTGCTCTCTCTATCTGGGGATGCAGCTTACTCGGTGACTAAGCGAGGCCGTGGGAGACCAAGGAAGCTACA
GC------------CGTCCCCCTC----------------------------------------CCTGGGAGGCGGCGAT
ACG--------------------------------------------------------TCAACTGGTGGCATCATCAAG
ATCAAGAGAGGGCGTGGGAGGCCGAGAAAGGAGGATCAACAATCACAGGAAGCAGCAACAA------AGCCTCTTCCAAC
TACAACCGCGTCGTCAACTGTTGGCATCATCAAGA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TCAA---CAAGAGAGGGCGTGGGAGGCCGAGAAAGGAGGACCAACAA------TCACAGGAAG
CAGCAACAAAGCCTCTTCCAACTACAACCGCGTCGTCAACTGTTGGCATCATCAAGATCAACAAGAGAGGGCGTGGGAGG
CCGAGAAAGGAGGAGAAACAATCACAGGAAGCAACAAATCCTCTTCCCACTCCAACCGCGTCGTCAACCGGTGGCATCAT
CAAGATCAAGAGAGGGCGTGGGAGGCCGAGAAAGGAGGACCAACAATCACAGGAAGCAACAATGCCTCCTCCAACTCCAC
CAGCGTCAA---GGCGGGGGATTAAGGTAGGGTGTGGAAGACCAATGCTAGCTCCTACA---------------------
GGGTCTCCTGGGAGTGGGACTGGGAGGCCACTAATGATAGACAAGCACCCACCAGAAACTGC---AAGGTGCTC---TGT
TGATGCTACGTCGTCAGTAATCAAGAGACCGCGCGGGAGGCCAAGAATGTACAGACTATCAGCAGAAGAAACTGGAGATG
CAACACCTGCTCCTCCTCAAACTGGATATTC------GATGGGAGTCAAGAGAGC---TCATGGTTGGCCAATTAAGGAG
AACC------CAGCAGCAGCAGCAGCAATGTCTGGTGAAACTGGAGATGTTGCATCGGCCGGAATCAAGATAGGGGGCGT
GCAACCGGAAGTGGAGAAGCCAACAGCAGCAATGTCTACTCAAGCCGGGGATGTTGGGTCAACGGGAATCAAGAGAGGGG
GTGAGCAACTAGAAGTGGAAATGCCAGCAGCAGCAATGTCTGCTCAAGCTGGAGATGCAACACCTGCTGAATTAACTGGA
GCTGCAAGGCTCATGGAAGCTGGAGATGCAAGGCCTGCTGAATTAACTGGAGCTGCAAGGTTCATGGAAGCTGGAGATGC
AAGGCCTGCTGAATTAACTGGAGCTGCAAGGTTCACGGAAGCTGGAGATGCAAGGCCTGCTGAATTAACTGGAGGTGCTG
CGTCGACGGGGATCAAGAGAGGGCGTGGGAGGCCAAGAAAGGACAAGACAGCAGCAGCAGCAATGCCTGCTGACGCTGCG
TCGACGGGGATCAAGAGAGGGCGTGGGAGGCCAAGAAAGGACAAGACAGCAGCAGCAGCAATGCCTGCTGACGCTGGGTC
TGCGGGGATCAAGAGAGGGCGTGGGAGGCCAAGAAAAGAGAAGAAGCCAGCAGCAGCAATGTTGGCTGAAACTGAAGCTG
GAGATACTGTGTCAACTGGGATGAAGGGGGCGCTTGAGAATCCAATATCAGGTAATGTCGTGTCAACTGGAACCAATGGA
GCACTTCTTAGAACGGAGAATCCAGTGGCAGGTGATTTTGTGTCCATGGTAATG------AAGAGAGGGCCTTG------
------------------CTT----TGATTGAAA-----CCTGGTTTGGAGACATGTCTGAAGAAGCTAGTCCATGTGTA
GGAA-------------------AGGAAACCAGGCCTGGCCTGAAGATGCATGCTGGATGTGTGATTTGAGTCTAGTCTC
TCTGGGCTGGGGCTCCCCAGCGAGTGCTCGATTGGTTGATGCATGTAAGCAAGCCGTTAGTAACATTCTCTTTTGCTAAA
TCTTTCTATATTTTGTGTCAGATCACATATAATATAGTAAGTATTAACGATGTTGCTATTTTCT-----------AGTAA
TTCTTAGTCGC--------ATTAATTATTATTTTTCTTTGTGTCAAACAGAGCTAGACTTGAAATTTTGAAGTGGAG---
-CATAGTAGAATGGGCAAAATAATAATAAAAAAGATGCTTCAATGGTGAAACATTTGCACATTA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS------------------------------S-----S-------------------S--S-
--------------------------------S-SS--SSS---------------------------------------
SS-------------S-----------S-SSSSS------------------------S---------------------
-------------------------------------------------------------------S-----------S
-----------------------------------------------------------S--------------------
------------S-----S-------------------------------------------------------------
-------------------SSSSSSSSSSSSS------S-------------------------------S--S--S--S
--------S--------SSS-SSSS-SSSSSSSSSSSSSSSSSS----------S---S---------------------
---------------------------S--------S-SSSSSSS--SS-SSSSSS-S-SS-SSS-SSS--SSS------
---------------------------------------------S-----------------------S-SS-------
--------------SSSSSSSSSSSSSSSS--------------------------------------------------
--S-----S----------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S-SS-S
-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----SS--------SS----
-------------S---------S-----------S-------------S-----------SSS------S--S------
-S----S---------------------SS-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS----------------------------------------SS-S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
-S--S------S--S----------------S---------------------------SSSSSSSSSSSSSSSSSSSSS
--------SS---S-S--------------S----------S----SS-------S---------------S--------
--------S--------S------------------------------S-------------------------------
------S-------S---------S-------------------------------------------------------
-----------------------------------------------------S---S---------------S------
--------SS---S--SSS-------------------------------------------------------------
-------------------S-S----S-S---S-------------------S-----SSSSS----S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S------S--------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
S-------------------------------------------------------------------------------
------SSS-SSS-SS--------------------S--------S----S-----------------------------
------------S---S---------------------------------------------------------SS-S-S
SSSSSSSSSSSSSSSSSSSSSSS----------SS-------------------------------S--------S----
--------------------------------------------------S-SS-SSSSS-SSSSSSS----S--S-SS-
------------------------------------S------S---S-S--------------SSSSSSSSSSS-----
-----------SSSSSSSS---------------------S--------S-----------------S------SSSSSS
S--------------------------S-----S------S--------------SSSSSS-SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_686
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TAGGAGGAGGAAGAGCACCC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_3058
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CACAAGTGGACAAGCCAACG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_1542
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--CGACGACGATGATGCCTACA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_3180
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CGGTCTGCAGGGATCAAGAG-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_2147
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CTGGGAGGCCAAGAAAGGAG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_4571
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------AAGCAAGCCATCTCCATCCC--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
