>input_sequence_41897
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-------------------------------------------------------------ATGAGAAAGCCCCACAAGC
TTCTGCCCAACTACCTTCTCCTCTACCGACGCACCAGACCCTACACCTCAACCGCGGCCAACCCCGTCGCGGCCGCCTCC
GCCGTCCTCCGTGACCTCGATCTCCTGGACGCCGGCGAGCTCGCCCCG----ACCCCGCGCGTTTACCGCTCGTTCATAA
CCGCCTGTGCGCAATCCAAGAACCTCGAGGATGCCAG---GAAGATCCACGCGCACCTGGGCAGCTCCCGGTTCGCCGGC
GACGCCTTCCTCGACAACTCGCTCATCCACATGTACTGCAAGTGCCGCAGCGTGCTGGACGCGCGGAATGTGTTCGACCA
AATGCGGAGGAAAGACATGGTCTCCTGGACCTCGCTCATTGCCGGGTACGCGCAGAACGACATGCCGGTGGAGGCCATCG
GGCTGCTCCCTGGCATGCTGAAGGGGCGGTTCAAGCCAAAC----GGGTTCACGTTCGCCAGCCTCCTCAAGGCTGCCGG
CGCTTATGCTGACAGCGGCACCGGGAGGCAGATCCATGCTCTCGCTGTGAAGTGTGGTTGGCATGAGGACGTCTATGTTG
GGAGCGCGCTTCTCGACATGTATGCGCGGTGTGGGAAGATGGACATGGCCACCGCAGTGTTTGACAAACTTGACTCGAAG
AATGGGGTTTCCTGGAACGCATTGATCTCCGGGTTTGCAAGGAAGGGTGATGGAGAGTCTGCTCTGATGACCTTTGCAGA
GATGCTGAGAAATGGGTTTGAAGCGACACATTTTACATACTCCAGTGTCTTCAGTTCTATCGCTCGTTTAGGTGCTCTTG
AGCAGGGGAAGTGGGTGCATGCACATGTGATTAAATCTCGGCAGAAACTGACTGCA-TTTGTTGGAAATACATTGCTTGA
CA----TGTATGCAAAATCAGGGAGCATGATCGACGCGAGAAAGGTGTTTGACCGTGTGGATAATAAGGATCTAGTTACT
TGGAACTCAATGCTCACAGCATTTGCACAATATGGGCTCGGGAAGGAAGCAGTTTCCCATTTTGAGGAGATGAGGAAGTC
TGGCGTTTACCTGAATCAGATCACCTTCCTTTGCATTTTGACTGCCTGTAGCCATGGAGGACTGGTGAAGGAGGGCAAGC
GCTACTTTGAAATGATGAAGGAGTACGATTTAGAACCAGAGATTGATCATTATGTTACGGTTGTTGCTCTTCTCGGCCGA
GCTGGTTTACTAAATTATGCTCTGGTCTTTATATTTAAAATGCCCATGGAGCCAACTGCTGCAGTTTGGGGAGCCTTGCT
TGCGGCTTGCAGAATGCATAAGAATGCTAAAGTAGGGCAATTTGCAGCTGATCATGTATTTGAACTTGACCCAGATGATA
GTGGTCCACCTGTCTTGCTGTATAACATATATGCTTCCACAGGCCAATGGGATGCTGCAGCCAGAGTGAGGATGATGATG
AAGACAACTGGTGTGAAGAAGGAACCTGCATGCAGTTGGGTTGAGATGGAGAATTCTGTGCACATGTTTGTGGCAAATGA
TGATACCCATCCACAAGCGGAAGAGATATATAAGATGTGGGGTGAGATAAGCAAGAAGATTAGGAAAGAAGGATATGTTC
CTGATATGGATTATGTGCTTCTGCATGTAGATGATCAAGAGAAGGAGGCAAACCTACAGTACCACAGCGAGAAGCTTGCG
CTTGCATTTGCACTGATCGAAATGCCTGCAGGGGCAACAATTCGTATCATGAAAAATATTAGGATATGTGGGGATTGCCA
CTCTGCATTCAAATACATCTCCAAAGTTTTTGGAAGGGAGATTGTTGTGAGGGACACAAATAGATTTCATCATTTCAGTA
GTGGATCTTGTTCCTGTGGAGATTACTGGTGA------------------------------------------------
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-------------------------------------------------------------------------
>chr5B_1_TraesCS5B01G255500
CGGCGGTTACTTGGTTGTTTCCAGCGCCGTCGATCGACTAAGGCTTGCAAATGACCCTCCGATGCCATCTTTGAGGTTGG
CCGATTCGATTTCCAGCGAAAAGGGACCTCACGACGATAGGACGGAGCTACGCGATGGCGGCCACACGGGTAGTGAAAAC
GATGACTCCGATGCGGACGAGTGCGGCAGACCAAATTTGTTGAGATGTTGTGTTGCTAGAGCATGGACCTGAGGGGTGAG
ATGTTGGGATTGAAAAGTTCACATTTAAAAAATAATGAAACGGG-----TGGACTAGAAGGTGCTTAATTCTTCATACTA
TAAAAAGAAAATAGACTAAATCTGATTTATGTGGAATGGGCTATAGAGAGGCCCTTGCTACTCTCTTAACAATTTTCTAA
ATCGATCGAACTAGCCATTCCCTTTTATGCTACCTCCGTTCA----AAATAAAATTTGCTTTAGATATATTAATTAATAC
TCTACTATATAAACTATTTTTTTGTGAAAAATATATAAACTACACTAGAACTAAAATGAGTGAACAAACACACTAAAATA
TATCCATATGCATTCAATTCAGATTTTTTTT---AACATCTTGTAGTACTCCCTCCGTTTCTTTTTAGTCTGCTATAAGA
TTTGGTCAAAGTCAAACTACACAAAATTTGACCAAATTTATATAAAAATATATGAACATCTACAATACTAAAACTATATA
ATATGAAAATACGTTTCATGATGCATCTAATAATATTGATTTTATATTGTGAATATTTATATTTTTTAATATAAAGTTAG
TCAAACTCAACCAGGCTTGACTTTGACCAAACCTTATATGCGGAGTAAAAAAAAAAGGAGGGAGTATTTGTGAACGGATG
GAGTAGTAAAAAGGAAACTGAGAATCAACCA-----AAAATATATTTTCTCGCTGTTCTTGTCATACGGACCCCTCGTTC
----CTTCTCGCCTTCTCGGGAGCAAAACGTCGGACACCTGCGGCCTCCTTCGCCACCTCCATGAGAAAGCCCCACAAGC
TTCTGCCCAACTACCTTCTCCTCTACCGACGCACCAGACCCTACACCTCAACCGCGGCCAACCCCGTCGCGGCCGCCTCC
GCCGTCCTCCGTGACCTCGATCTCCTGGACGCCGGCGAGCTCGCCCCG----ACCCCGCGCGTTTACCGCTCGTTCATAA
CCGCCTGTGCGCAATCCAAGAACCTCGAGGATGCCAG---GAAGATCCACGCGCACCTGGGCAGCTCCCGGTTCGCCGGC
GACGCCTTCCTCGACAACTCGCTCATCCACATGTACTGCAAGTGCCGCAGCGTGCTGGACGCGCGGAATGTGTTCGACCA
AATGCGGAGGAAAGACATGGTCTCCTGGACCTCGCTCATTGCCGGGTACGCGCAGAACGACATGCCGGTGGAGGCCATCG
GGCTGCTCCCTGGCATGCTGAAGGGGCGGTTCAAGCCAAAC----GGGTTCACGTTCGCCAGCCTCCTCAAGGCTGCCGG
CGCTTATGCTGACAGCGGCACCGGGAGGCAGATCCATGCTCTCGCTGTGAAGTGTGGTTGGCATGAGGACGTCTATGTTG
GGAGCGCGCTTCTCGACATGTATGCGCGGTGTGGGAAGATGGACATGGCCACCGCAGTGTTTGACAAACTTGACTCGAAG
AATGGGGTTTCCTGGAACGCATTGATCTCCGGGTTTGCAAGGAAGGGTGATGGAGAGTCTGCTCTGATGACCTTTGCAGA
GATGCTGAGAAATGGGTTTGAAGCGACACATTTTACATACTCCAGTGTCTTCAGTTCTATCGCTCGTTTAGGTGCTCTTG
AGCAGGGGAAGTGGGTGCATGCACATGTGATTAAATCTCGGCAGAAACTGACTGCA-TTTGTTGGAAATACATTGCTTGA
CA----TGTATGCAAAATCAGGGAGCATGATCGACGCGAGAAAGGTGTTTGACCGTGTGGATAATAAGGATCTAGTTACT
TGGAACTCAATGCTCACAGCATTTGCACAATATGGGCTCGGGAAGGAAGCAGTTTCCCATTTTGAGGAGATGAGGAAGTC
TGGCGTTTACCTGAATCAGATCACCTTCCTTTGCATTTTGACTGCCTGTAGCCATGGAGGACTGGTGAAGGAGGGCAAGC
GCTACTTTGAAATGATGAAGGAGTACGATTTAGAACCAGAGATTGATCATTATGTTACGGTTGTTGCTCTTCTCGGCCGA
GCTGGTTTACTAAATTATGCTCTGGTCTTTATATTTAAAATGCCCATGGAGCCAACTGCTGCAGTTTGGGGAGCCTTGCT
TGCGGCTTGCAGAATGCATAAGAATGCTAAAGTAGGGCAATTTGCAGCTGATCATGTATTTGAACTTGACCCAGATGATA
GTGGTCCACCTGTCTTGCTGTATAACATATATGCTTCCACAGGCCAATGGGATGCTGCAGCCAGAGTGAGGATGATGATG
AAGACAACTGGTGTGAAGAAGGAACCTGCATGCAGTTGGGTTGAGATGGAGAATTCTGTGCACATGTTTGTGGCAAATGA
TGATACCCATCCACAAGCGGAAGAGATATATAAGATGTGGGGTGAGATAAGCAAGAAGATTAGGAAAGAAGGATATGTTC
CTGATATGGATTATGTGCTTCTGCATGTAGATGATCAAGAGAAGGAGGCAAACCTACAGTACCACAGCGAGAAGCTTGCG
CTTGCATTTGCACTGATCGAAATGCCTGCAGGGGCAACAATTCGTATCATGAAAAATATTAGGATATGTGGGGATTGCCA
CTCTGCATTCAAATACATCTCCAAAGTTTTTGGAAGGGAGATTGTTGTGAGGGACACAAATAGATTTCATCATTTCAGTA
GTGGATCTTGTTCCTGTGGAGATTACTGGTGATTCTGCCAAGATGTAGTGCGTTTATAAATCTACAAGGCCATG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GTTTGATTCAGTAACAGCCAACAGGAACCTTTTTATGGACTGATAAAGGGCA
AAGTTTTTCTGCTTGATTGTCTCTGTTGACAGAGCAAACAGCACG-----TGCGGCCCTGAAGATCATTTGACATCC---
---TTCATGAGGGATGA----------------ACTCCAGAAGACATGCACTTTCATCCTTGTAGCGCAATCACTAAAAT
TTCGCAGGTTGCTAAAACAGCATCATTGTCTTCATGATTCCTGGGAGAAAAGTAG---------------ACCTCCATTT
GGAGGCACAATCTCCGACTGGAAACACACTTCAGATGGCTTTATTTTCCAGGTAAACATTCCCAACAACCTATCTTGCTC
ATACGTGCAAACGAATGATAGTCTGCGGATTTCCTGGACCTAATTTCCACACCGGATAAATTCCAGAGAGAGAACAATTT
AGATATCCGTAATTCTACAAGTGCAAGGCTGGGTGATTTTGCTACATATGCATGGTGTACATTTCAGAGTATATCGGGTT
CAGCTCAGAGCTCACGAAGCGCAATGCACGGTGATTTTGCTAACCATTGCCCTTTGGGACTGATGATGGCTCTTTTGTAG
TCACTTGCTCGTCGTTCTTTCGGTCCATGCTCCTCGTGCACTACTCCACAAAATATGTCCCTTTTGGAACTGCCAGAAGC
CTCTGGGACTGGGAATATGCGTGGTTGTTCTGCTCGGCCACTGGAGGTGATTGTCCAACAAGGGGATGCACT--------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------TGA
TTCAGTCTGGCGACAGTGACAGATCGGTTTACTCTTCCTTGGTTGAGGAGATAAAGCTACTCCTAAACCTACGTAGAACT
AGTATTAATCATGTTAGACGCTCACAACATAAGGTTAGCAATTATTTGGCTATCTTTGCTCGTGTGGAAGGCAGAACTAT
GATTTCGCTAGGGTCTGGCCCTCCTCGTGGGCCGATTGAGTTGAACAATGTTGATTGTAATGCTCTTCTGGTT
>chr5A_2
GGG-GGTTACTTGGCCGATTCCGGCGGCGTCGACCAGCTAGGGCTCAGAAATGTGCCTCCTACGCCATCTTCGAGGTTGG
CCGATTCGATTTCCAGCGAAA-GGGACCTCACAATGATGGGACGGAGCTCTGCGATGGTAGCCACAGGGGCAGTGAAAAC
GATGATTCCGACACTGGCGAGTGTGGTAGACCAAATTTGTCGAGATGTTGTGTTGCTAGAGCATGGACCCGAGGGGTGAG
ATGTCAGGATTGAAAAGTTGACCTTCTAAAAAATTAAATGAATCGGGGATGGACTAGAAGGTGCTTAATCTTTAGAATAC
AA-----AAAATAGACTAAATTTGACTTATGTGGGATGGGT--TAGAGAGGCCCTTGCTACTCTCTTAACGACTTTCTAA
-TCGATCAAATTAGCCATTCTTTTAAAAGGTACTACCTCCATTCATAAATATATGATGGTTTGGATATTTTAATGC----
---------------------------------TATGAACTACCTATGGAGTGAAATGGCTGAACAAACAGACTAAAACA
TCTCTATATACATTCAATTCAGAAAAAAAAGTTGAACACTTTTTAGTACTCCCT--------------------------
-------------------------------------TTATCTCATAATATAAAATCGTTTTGCAAACTAAAACAGCTTG
CAAAACGGTCTTATATTACGGGAC--------------------------------------------------------
--------------------------------------------------------GGAGGAAGTATTTGTGAACGGATA
GAATAGTAAAAAAACGAGAATTAGCCA---AAATAGAAAATATTTTTTCTCGCTGT-------ATACGGACCC-----TC
----GTTCTCGCATTCTCGCGAGCAGAACGTCGGACACCGGCCGCCCCTTTCGCCACCTCCATGAGAAAGCCCCACAAGC
TTCTGCCCAACTACCTTCTCCTCTACCGACACACCAGACCCTGCACCTCAACCGCGGCCAACCCCGTCCCGGCCGCCTCC
GCCGTCCTCCGTGACCTCGATCTCCTGGACGCTGGCGAGCTCGCCCCG----ACCCCGCGCGTTTACCACTCGTTCATAA
CCGCCTGTACGCAATCCAAGAACCTCGAGGATGCCAG---GAAGATCCACGCGCACCTGGCCAGCTCCCGGTTCGCCGGC
GACGCCTTCCTCGACAACTCGCTCATCCACCTCTACTGCAAGTGCGGCAGCGTGCTGGAAGCGCGGAAGGTGTTCGACGG
AATGCGGAGGAAAGACATGGTCTCCTGGACCTCGCTCATTGCCGGGTACGCGCAGAACGACATGCCGGCGGTGGCCATCA
GGCTGCTCCCTGGCATGCTGAAGGGGCGCTTCAGGCCGAAC----GGGTTCACGTTCGCCAGCCTCCTCAAGGCTGCCGG
CGCTTATGCTGACAGTGGCATCGGGAGGCAGATCCATGCTCTTGCTGTGAAGTGTGACTGGCATGAGGACGTCTATGTTG
GGAGCGCGCTCCTCGACATGTATGCGCGGTGTGGGAAGATGGACATGGCCACCGCAGTGTTTGACAAACTTGACTCGAAG
AATGGGGTTTCTTGGAACGCATTGATCTCCGGGTTTGCGAGGAAGGGTGATGGAGAGACTGCTCTGATGACCTTTGCGGA
GATGCTGAGAAATGGGTTTGAAGCGACACATTTTACATACTCCAGTGTCTTCAGTTCTATCGCTCGTTTAGGTGCTCTTG
AGCAGGGGAAGTGGGTGCATGCACATGTGATTAAATCTCGGCAGAAACTGACTGCA-TTTGTTGGAAATACATTGCTTGA
CA----TGTATGCAAAATCAGGGAGCATGATTGACGCAAGAAAGGTGTTTGACCGTATGGACAATAAGGATCCAGTTACA
TGGAACACAATGCTCACAGCATTTGCACAATATGGACTGGGGAAGGAAGCAGTCTCCCATTTTGAGGAGATGAGGAAATC
TGGCGTTTACCTGAATCAGATCACCTTCCTTTGCATTTTGACTGCCTGTAGCCATGGAGGACTGGTGAAGGAGGGCAAGC
GCTACTTTGAAATGATGAAGGAGTACGATTTAGAACCGGAGATTGATCATTATGTTACGGTTGTTGCTCTTATGGGCCGA
GCTGGTTTCCTAAATTATGCTCTGGTCTTTATATTTAAAATGCCCATGGAGCCAACTGCTGCAGTTTGGGGAGCCTTGCT
TGCGGCATGCAGAATGCATAAGAATGCTAAAGTAGGGCAATTTGCAGCTGATCATGTCTTTGAACTTGACCCAGATGATA
GTGGTCCACCTGTCCTGTTGTATAACATATATGCTTCCACGGGCCAATGGGATGCTGCAGCCAGAGTGAGGAGGATGATG
AAGACAACTGGTGTGAAGAAGGAACCTGCATGCAGTTGGGTTGAGATGGAGAATTCTGTGCACATGTTTGTGGCAAATGA
TGATACCCATCCACGAGCGGAAGAGATATATAAGATGTGGGGTGAGATAAGCAAGAAGATTAGGAAAGAAGGATATGTTC
CTGATATGGATTATGTGCTTCTGCGTGTAGATGACCAAGAGAGGGAGGCAAACCTACAGTACCACAGCGAGAAGCTCGCG
CTTGCATTTGCGCTGATCGAAATGCCTGCAGGGGCAACAATTCGCATCATGAAGAATATTAGGATATGTGGGGATTGCCA
CTCTGCTTTCAAATACATCTCCAAAGTTTTTGGAAGGGAGATTGTTGTGAGGGACACAAATAGATTTCATCATTTCAGTA
GTGGATCTTGTTCCTGTGGAGATTACTGGTGATTCTGCCAAGATGTAGTGCGTTTATGAATCTACAAGGCCGTG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GGTTGATTCAGTAACAGCCAACAGGAACCTTTTTATGGACTGATAAAGGGCA
AACTATTTCTGCTTGATTGTCTCTGTTGACAGAGCAAACCGCAAGCATGCTGCGGCCCTGAAGATCATTTGGCATCC---
---TTCATGAGGGATGG----------------ACTCCAGAAGACATGTGCTTTCATCCTTATAACGCAATCACTAAAAT
TTCGCAGGTTGCTAAAACAGCATCATTGTCTGCATGATTCCTGGGACAAAAGTAG---------------ACCTCCATTT
GGAGGCACGATCTCCGACTGGAAACACACTTCAGATGGCTTTATTTTCCAGGTAAACATTCCCAACAACCTATCTTGCTC
ATACGTGCAAATGAATGATAGTCTGCCGATTTCCGGAACCTAATTTCCGCACCTGATAAATTCCAGAGAGAGAACAATTT
AGATATCCGTAGTTCTACAAGTGTAAGGCCGGGTGATTTTGCTACATATGCATGGTGTGCATTTCAGGGTATATCGGTTT
CAGCCCAGAGCTCACGAAGCGCAATGCACGTTGATTTTGCTAAGCATTGCCCTCTGGGACTGATGATGGCTCTTTTGTAG
TCGCTTGCTCGTCGTTCTTTCGGTCCATGCTCCTCG--------------------------------------------
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-------------------------------------------------------------------------
>chr5D_883
AAACCT--------------------------------------------------------------------------
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---------------GAGAATTAGCCA---A-----AATATATATATTCTCGCTGTTCTTTTCACACGGACCC-----TC
GTTTCTTCTCGCCTTCTCGGGAGCAAAACGTCGGACACCTGCCGCCA---TCGCCACCTCCATGAGAAAGCCCCTCAAGC
TTCTGCCCAACTGCCTTCTCCTCTACCGACACACCAGACCCTACACCCCAACCGCGGCCAACCCCGTCCCGGCCGCCTCC
GCCGTCCTCCGTGACCTCGATCTCCTGGACGCCGGCGAGCTCGCCCCG----ACCCCGCGCGTCTACCACTCGTTCATAA
CCGCCTGCGCGCAATCCAAGAACCTCGAGGATGCCAG---GAAGATCCACGCGCACCTGGCCAGCTCCCGTTTCGCGGGC
GACGCCTTCCTCGACAACTCGCTCATCCACCTCTACTGCAAGTGCGGCAGCGTGCTGGAAGCGCGGAAGGTGTTCGACGA
AATGCGGAGGAAAGACATGGTCTCCTGGACCTCGCTCATTGCCGGGTTCGCGCAGAACGACATGCCGGCGGAGGCCATCG
GGCTGCTCCCTGGCATGCTGAAGGGGCGCTTCAAGCCGAAC----GGGTTCACGTTCGCCAGCCTCCTCAAGGCTGCCGG
CGCTTATGCTGACAGCGGCATCGGGAGGCAGATCCATGCTCTCGCTGTGAAGTGTGGTTGGCATGAGGACGTCTATGTTG
GGAGCGCGCTTCTCGACATGTATGCGCGGTGTGGGAAGATGGACATGGCCACCGCAGTGTTTGACAAACTTGACTCGAAG
AATGGGGTTTCCTGGAACGCATTGATTTCCGGGTTTGCGAGGAAGGGTGATGGAGAGACTGCTCTGATGGCCTTTGCAGA
GATGCTGAGAAGTGGGTTTGAGGCGACACATTTTACATACTCCAGTGTCTTCAGTTCTATCGCTCGTTTAGGTGCTCTTG
AGCAGGGGAAGTGGGTGCATGCACATGTGATTAAGTCTCGGCAGAAACTGACTGCA-TTTGTTGGAAATACATTGCTTGA
CA----TGTATGCAAAATCAGGGAGCATGATCGATGCGAGAAAGGTGTTTGACCGTGTGGATAATAAGGATCTGGTTACT
TGGAACACAATGCTCACAGCATTTGCACAATATGGACTGGGGAAGGAGGCAGTCTCCCATTTCGAGGAGATGAGGAAATC
TGGCGTTTACCTGAATCAGATCACCTTCCTTTGCATTTTGACTGCCTGTAGCCATGGAGGACTGGTGAAGGAGGGCAAGC
GTTACTTTGAAATGATGAAGGAGTACGATTTAGAACCGGAGATTGATCATTATGTTACGGTTGTTGCTCTTCTCGGCCGA
GCTGGTTTACTAAATTATGCTCTGGTCTTTATATTTAAAATGCCCATGGAGCCAACTGCTGCAGTTTGGGGAGCCTTGCT
TGCGGCCTGCAGAATGCATAGGAATGCTAAAGTAGGGCAATTTGCAGCTGATCATGTCTTTGAACTTGACCCAGATGATA
CTGGTCCACCTGTCCTGTTGTATAACATATATGCTTCCACGGGCCAATGGGATGCTGCTGCTAGAGTGAGGAGAATGATG
AAGACAACTGGTGTGAAGAAGGAACCTGCATGCAGTTGGGTTGAGTTAGAGAACTCTGTGCACATGTTTGTGGCAAATGA
TGATACTCATCCACGAGCGGAAGAGATATATAAGACGTGGGGTGAGATAAGCAAGAAGATTAGGAAAGAAGGATATGTTC
CTGATATGGATTATGTGCTTCTGCGTGTAGATGATCAAGAGAGGGAGGCAAACCTACAGTACCACAGCGAGAAGCTCGCG
CTTGCATTCGCACTGATCGAAATGCCTGCAGGGGCAACAATTCGTATAATGAAGAATATTAGGATATGTGGGGATTGCCA
CTCTGCATTCAAATACATCTCGAAAGCTTTTGGAAGGGAGGTTGTTGTGAGGGACACAAATAGATTTCACCATTTCAGTA
ATGGATCTTGTTCCTGTGGAGATTACTGGTGATTCTGCCAAGCTGTAGTGCGTTTATGAATCTACAAGGCCATAGGCAGT
GGCGGAGCTTCACTAGGGCCAAGGGGGGCTATGGCCCCCCTACCCTAGAGAAAGTATATGAAATACCATTAATTGGTAAG
CTAAAATTTTAAAAATTATCATAGTTTAAGCAGAATATGTCCTTTTGCCCCCCCATAACTCGGCTTTGCCCCCTCAACAA
TCTCTGTCAAGCTCCGCCACTGGCCATAGGTTGATTCAGTAACAGCCAACAGGGACCTTTTTATGGACTGATAAAGGGCA
AACTATTTCTGCTTGATTGTCTCTGTTGACAGGGCAAACAGCACGC----TCCGGCCCTGAAGATCATTTGACATCC---
---GTCATGAGGGATGG----------------ACTCCAGAAGACATGTGCTTTCATCCTTCTAGCGCAATCGATAAAAT
TTCATGGGTTGCTGAAACAGCATCATTGTCTGCGTGATTCCTGGGAGGAAAGTAG---------------ACCTGCATTT
GGAGGCACAATCTCCGACTGGAAACACACTTCAGATGGCTTTATTTTCCAGGTAAACATTCCCAACAACCTATCTTGCTC
ATACGTGCAAATGAATGATAGTCTGCCGATTTCCGGAACCTAATTTCCACACCGGATAAATTCCAGAGAGAGAACAATTT
AGATATCCGTAATTCTACAAGTGTATGGCTGGGTGATTTTGCTACATATGCACGGTGTGCATTTCAGGGTATATCGGGTT
CAGCTCAGAGCTCACGAAGCACAATGCACGGTGATTTTGCTAACCATTGCCCTCTGGGACTGATGATGGCTCTTTTGTAG
TCACTTGCTCGTCGTTCTTTCGGTCCATGCTCCTCGTGCACTACTCCACAAAATATGTCCCTTTTGGAACTGCCAGAAGC
CTCTGGG------AATATGCGTGGTTGTTCTGCTCTGCTACTGGAGGTGATTGTCCAACAAAAGGATGCACTTATGTTCC
AGCCATGACTTGTGCCGAAATGTATACTACGTACTCCGCAAAAATATTTGCTCCACAGTCCACACAAGTGTGTGGGTGTC
GTTGGTATCTTGATCGTGATCATAGCGGAGGGCCTACTCTACTCCTAGGACGGTTTGGAAGCTGAATTTGGTGCGTGTAT
GGAGGGGCTTTCTCAGGCCTTGATGAGAAGTAATCTGCCGGTGATGGTAGAATTGGATTCTCTACAAGCTGTTAGAATGA
TTCAGTCTGGCGACAATGACAGATCGGTTTACTCTTCCTTGGTTGAGGAGATAAAGCTACTCCTAAACCTACATAGAGCT
AGTATTACTGATATTAGACGCTCACAACATAAGGTTGGCAATTGTTTGGCTATCTTTGCTTGTGTGGAAGGCAAAACTAT
GATTTGGCTAGGGTCTGGCCCTCCTCGTGAGGCGATTGAGTTGAACAATGTTGATTGTAATCCTCTTCTCGTT
>chr2D_1071
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---------------------------------------------------CCGCGGCCAACCCCGTCGCGGCCGCCTCC
GCCGTCCTCCGTGGCCTCGATCCCCTGGACGCCGGCGAGCTCGCCCCGCACGACCCCGCGCGTTTACCACGCGTTCATCA
CCGCCTGCGCGCAGTCCAGGAACCTCGAGGATGCCAGCAGGAAAGTCCACGCTCACCTGGCCAGCTCACGGTTCGCGGGC
GACGCCTTCCTCGACAACTCACTCATTCACATGTAGTGCAAGGGCGGAAGCGTGCTCGAAGCGCAGAA---------CGA
AATGCGGAGGAAAGACATGGTTTCCTGGACCTCGCTCATCGCCGGGTACGCGCAGAACGACATGCCGGAGGAGGCCATTG
CGCTGCTACCCAGCATGCTCAAGGGGAGCTTCAAGCCTAACGTACGGGTTCACGTTCGCCAGCGTCCTTAAGGCCGCTGG
TGCTTACGCGGACAGTGGCGTCGGGGGACAGATCCATGCTCTCGCCATGAAGTGTGATTGGAATGAGGATGTCTACGTTG
GGAGCGCACTTGTTGACATGTACGCGCGGTGTGGGAGGAAGAACGGGGT-------------------------------
-------TTCCCTGGAACGCTCTGATTTCTTGGTTTTCAAGGAAGGGCGACGGAGAAACAGCTTTAAAGGTGTTGGCCGA
GATGCAAAGAAATGGGTTTGAGGCGACACATTTTACTTACTCCAGCCTGTTCACTGCCATTGCTAGTTTAGGTGCTCTTG
AGCAGGGGAAGTGGGTGCATGCACATATGATTAAGTCTCGGCAGAAACTGACCGCGGTTCCTTGGGAACACAATTCTTGA
CATATATGTATGCAAAATCGGGGAGTATGGTTGACGCGAAAAAGGTGTTTGACCGTGTGGAGAGTAAAGATCTAGTTACT
TGGAACTCCGAAGC-------------------------------GAAGCAATCTCCCATTTTGAGGAGATGAGGAAATC
CGGCATTTACCTGAATCAGGTCTCCTTCCTTTGCATTTTGACCGCCTGTACCCATGGAGGCCTGGTGAAGGAGGGAAAGC
ACTACTTTAACATGACGCAGGAGTATAATTTAGAGCCCGAGATTGACCATTATGTTACGGTTGTTGATCTATAAGCGGAA
GAAGTAGGT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------AAGCGGAAGAGATATATAAGATGTGGGATGAGATAACCATGAAGATTAGGAAAGAAGGATATGTTC
CTGATATGGATTATGTCCTTGTGCGTGTAGATGATCAAGAGAGGGAGACAAACTTACAGTACCACAGCAAGAAGATCGCG
CTCGCATTTGCACTGATCCAGATGCCTACAGGGGCAACAATTCGGATCATGAAGAATATTAGGATATGTGGGGATTGCCA
CTCTGCATTCAAATACGTCTCCAAAGTTTTTAAAAGGGAGATTGTTGTGAGGGACACTAATAGATTTCACCATTTCAGTA
ATGGGTCTTGTTCCTGTGGAGATTACTGGTGATTCTGCTAATATTTAGTGTGTTTATGAATCTACACGGCCATG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GGTTGATTCAGTAACAGACAACAAGAACTTGTTCATGCAC------AGGTCG
AGCCATATCTGCTTGATTTTC--TGTCGGCAGAACAAACAGCATGC----TGCAGCCCTCAAGATCATTCAGCATTCATT
TCGTTCATGAGGGAGGGAGGGAAATTAAGAGCTACTCTTGAAGACATGTGCTTTCGCTCTTATAGCACAATCACTAAAAT
TTCGCAGGTTGCAGAAGCAGCATTATTGTGTGTGTGTGTGGCTTATGGGTTTCTGAGAGGAACTTAGACCACCTGCATTT
GGAGGTGCAATGTCCGAATAGAAGCATGCTTCGGATGTCTTTATTT--CAGGTAAAAATTCCCAACAATATATCTTGCGG
ATATTTGCAAATGATGGTGGGTTGAC----TTCCAAAACCTAATTACCACATCGGATGAATTCCACAGAGAAATAGTGTT
AGGCGTAATTAATTCTAGAAATATAAGGCTGGGTGATTT-GCTACTTATGCA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>SNPs
S-------------SS-S----S---S------S-SS---S----SSS-----SS-----S-S--------S--------
---------------------S----------S-S---S----------SS-------SS------S---S---------
-----S-----SS-S-S------S--S-------------S----------------------------S----------
----SS-------------S--S--SS-----SSSSS-SSSSSS-------------------------SS--SSS-SSS
S-SSSSS--------------S---S--------S-----SSS---------------------------S-S-------
S------S--S---------SS--SS-S-S---SS--SSSSS---------S-SSS--S---S-----S-----SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S------SSSS-S-S-S-----SS----------S-------S-
-S--S----S-------------SSSSSSSS-------SS--S-----------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-S-S------SS-S-S-S-SSS-S--------SSSS-S
SS-SSSSSSSSSS-S-S-S-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-----------------S
--S---------SSSS-SSSSS-SS--SSS------------------------------S------------SSSSS--
------------------------------------------S---S-S-------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------S-----------
------------------------------------------------------------S-------------------
---------------------------------------------S-------------S--------S---------S-
--------------------------------------------------------------------S-----------
----------------------------S--------S------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--S--------------S-----------------------S--
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
------S--------------------------------------------------S----------------------
--------------S--S----------------------S-------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-----------------S---------------------------------S---
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
--S-S---------------------------------------------------------------------------
----------------S-------------------------------SS-----------S------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------S-------S-S-------------------------------------------
-----------------------S----------------------------------S--------S------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
-------SSSSSS----------------------S--S----------------------SS-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S--------------------------------------------------------S----S--
-------S-S--S-----------------------S------S----------------S------------S------
-----S-----------------------S-S-----------------------------S-------S---
>forward_957
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CTTGTCATACGGACCCCTCG---
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_2036
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------GCTCGGGAAGGAAGCAGTTT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_958
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TTGTCATACGGACCCCTCGT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_2683
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AGGAGGCAAACCTACAGTACC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_2418
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TA
GTGGTCCACCTGTCTTGC--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_3624
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CAAGGCTGGGTGATTTTGCT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
