>input_sequence_41876
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--------------------------------------------------------------------AGAAAATATTGG
GAAGCAGATAGTGAAAGCCAAATCTGTAGTATAAATTTGATGTTTTTATGTTTTTGGATCTGTTCGTCTTTCGTCGGCAT
TCGCATGTATTCAGATTGGATCCTTCCGATCTACGCTAGTCTTCATCGGCAGCGGTTACTGTTCTGGTGCGCTGGTCCTA
TGGGGCCTTAGCACGACGACGTCCTGAGTATCAATTTGATGTTGATGATGAATTTTTCACACGGATAGTCATGTACATAA
CATTGCAGTTGCAAAGATTCTAGAGACTCGAATAGACAATCAGAGGGAATATTAGCATATCCATTTCTAATTTTGAAGGG
CTCAAGTTCTAAGTGGGTATTTTAACAACATTTTGGAGTACATGCTAATGGTGAGAGAACATACGAATCTACACCAGAAT
ATACAGAACACACAAGCAATGACCATTAACCAGCATTTAGCAAAACGAATATTTGCCCAAGCATCAAAATATTTGTGATA
AACAAAGTAACAGTATGTGGCATGACCAATGAACATGGGG-TTTGAACGAGGTACAGAGCAGAGACTGGAAAATTAAATT
GGGCCC-GCATGAGGTGGGGAGTGAGAGGATGGAAGGGGTGGCGGCCTTGATTTGGTGAGAAAGCTTAGCTTGAGAGAAC
TACAGGACATTTACATCAGTGATAGCTTAGAGATAATGTCTCAGTTAGCCAAGTGAGTGGTATTCTAGATTTCCCTATAT
TCTACCCACACTATTAACAAATTTGACATGAGACTACCCTAAGCATCAAGCAATAGTTCCATGTGAAACA----------
-ACATATAGAAACTGAATAAAGTATGCTAATGTTTCTGTTGAATATTTGAACTTGACTTTTCCAGATCATTTCTACAGGG
ATGTGCTACTTCAGTACGCGTCAAGAACCAAGATAATAAAAGATTGTATCATGGGAGCCCTGGCAAATCTTCTAGAGCTC
GATGAGGATTACTTCATCAATAGGACCACAACCAGGGCCCGAGCATTAGCTAGGCTAGGCTACTACCCTCCATGTCCGAG
GCCTGACCTTGTTTCGGGCTTCAAGCCTCACTATGATGGTGGCGCCCTTTCAATCCTTTTCGTCGAGGAGAACGTCGGTG
GCTTGCAAGTTCTGAGAAATGGAAAATGGTACAATATTCTAGCCAAGCCTTATACATTGTTGATCAACATAGCAGAGTGC
ATTGAGGTAGGCACCTACAAATACAAGCTACTTCATCTACTCCCTCTATGTC-AAATACTTCAGATTATGGGTCTTGGAT
TTATGTCATCTTACTTCACAATCTGAATTAATGTTCCAAGGAGTAATCAACAGTAAAACAAAAAGCCACACCCCTTATTT
TGGGCTTCTTTAATGCTAACATGGTTTTGATTGATTGGTTATATGGCTCAGTAGTACTGATAAATGCTTTGCTTATTTTG
TCCAAAAAATTTCAGAATGTGAATTATTGAGATACGAAGGGTGTAGTAATAAATATGGAAGAATTTGATTAATTGAATAT
CCTAGTGTGGCCTCTGAGTCGTCACAAAGTTGCATTTAATTTTTT--CACGCGGATAATGAGTAATGGCATCTTGAAGAG
CCCACCACATAGGGTCTTGACAAATGCAGAGAAGGAAAGGACCTCAGTAGCTATATTCTATGGCGTGGATGTGGAAACGG
TGGTTGAACCAGCACCTGGTTTGTTGGATGAGAAGCGACTGGCAAGATTCAAGAAAATAAAGGCCGAGGATTACTATGGT
ACTGTCTTTGGGCATTTCCGCCAAGGAAAAAGGCTTATCAACACCCTGATAATTTAAGCAAATCATTTTAT----GTTAG
ATTTGATTCAAGTTTTAATAGTGGTTACCTATAAATGTAATAAA------------------------------------
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>chr5D_1_TraesCS5D01G007300
AAATCTTTGAGGCAAGCAATCTGGTTCTCAGTAGCTCACTAATAAGTAGAAGGAAATAAAACCACTATTATCTATAGTCA
TCCAGATAGCTAAATAATAAGGCTGTTGAGCCAATGCATT------CACACACACACAAAATTTCATATAATAACTATA-
TGTGCATAGAAAATAATGCGGTAAAGATGTTTGAACCTGTAGGTATTAAAAATAAGAGTGATAAAAAGCAAAAATATTTT
AGCCACTTACTAAAATCAAAGACTGTTAAAAGCAATAAATGGCTCAAAATTTTAGTCCCTTTAGACTTAGGCATCTGGTG
GT-AAAGTGACATTTTGACCATCAATTAGGAAAACTAGCCATCAACTCATGCCAGGGCACGGGCCAGTTATTTTTATAAA
AAATCATACATGGCAGAAGTATAATATTATAGAATCTGATTAAAAAATATCTATTGACTATTTGTGTGAGAAAATTTTGG
TTACTACTATTACAATCCTTTTTATGTTTGCATTGAGTACTTTAGGATAGTCTTTTT-AGGGAGACTAGTTTAATATTGT
TGATAAATATAGGGCGACTCTCTTTGTTGTGGGTTGAGGATTCCCTTTTCGGTACATGGCTTTTTACTTATTTTCTAATT
AGAGCTGGGTATGTTTCTTAGAAGTACGTGAAAGGGTAGGACTCTCTTTTCTTGCGTGTGG-TTTTTTTTTGTGTCCATT
TTCTTACGTGTGGTGCTTTAGTTTTCTTTTGTACGTGCTTGTTTTTCTTAATTGGGCCGGAATATGTGGTATAGGTACAA
ACTTAATGCCTTATCTAGTTTGGCATCATGAATACTAACTCAAGTTATATTCCAACTAAAAAAGTGGAACGGGACAACTA
TTATGTATCATGATTTATGTTTTAATCTCAACCATTGATTATTATATCTAACGTCCGAATTAATTTGAATGATGTGGATT
GATGAGGAGC------------------TTAGTATGGAGTATATATAAAGATGTGTGTTCCTTCAGATAGAAAATATTGG
GAAGCAGATAGTGAAAGCCAAATCTGTAGTATAAATTTGATGTTTTTATGTTTTTGGATCTGTTCGTCTTTCGTCGGCAT
TCGCATGTATTCAGATTGGATCCTTCCGATCTACGCTAGTCTTCATCGGCAGCGGTTACTGTTCTGGTGCGCTGGTCCTA
TGGGGCCTTAGCACGACGACGTCCTGAGTATCAATTTGATGTTGATGATGAATTTTTCACACGGATAGTCATGTACATAA
CATTGCAGTTGCAAAGATTCTAGAGACTCGAATAGACAATCAGAGGGAATATTAGCATATCCATTTCTAATTTTGAAGGG
CTCAAGTTCTAAGTGGGTATTTTAACAACATTTTGGAGTACATGCTAATGGTGAGAGAACATACGAATCTACACCAGAAT
ATACAGAACACACAAGCAATGACCATTAACCAGCATTTAGCAAAACGAATATTTGCCCAAGCATCAAAATATTTGTGATA
AACAAAGTAACAGTATGTGGCATGACCAATGAACATGGGG-TTTGAACGAGGTACAGAGCAGAGACTGGAAAATTAAATT
GGGCCC-GCATGAGGTGGGGAGTGAGAGGATGGAAGGGGTGGCGGCCTTGATTTGGTGAGAAAGCTTAGCTTGAGAGAAC
TACAGGACATTTACATCAGTGATAGCTTAGAGATAATGTCTCAGTTAGCCAAGTGAGTGGTATTCTAGATTTCCCTATAT
TCTACCCACACTATTAACAAATTTGACATGAGACTACCCTAAGCATCAAGCAATAGTTCCATGTGAAACA----------
-ACATATAGAAACTGAATAAAGTATGCTAATGTTTCTGTTGAATATTTGAACTTGACTTTTCCAGATCATTTCTACAGGG
ATGTGCTACTTCAGTACGCGTCAAGAACCAAGATAATAAAAGATTGTATCATGGGAGCCCTGGCAAATCTTCTAGAGCTC
GATGAGGATTACTTCATCAATAGGACCACAACCAGGGCCCGAGCATTAGCTAGGCTAGGCTACTACCCTCCATGTCCGAG
GCCTGACCTTGTTTCGGGCTTCAAGCCTCACTATGATGGTGGCGCCCTTTCAATCCTTTTCGTCGAGGAGAACGTCGGTG
GCTTGCAAGTTCTGAGAAATGGAAAATGGTACAATATTCTAGCCAAGCCTTATACATTGTTGATCAACATAGCAGAGTGC
ATTGAGGTAGGCACCTACAAATACAAGCTACTTCATCTACTCCCTCTATGTC-AAATACTTCAGATTATGGGTCTTGGAT
TTATGTCATCTTACTTCACAATCTGAATTAATGTTCCAAGGAGTAATCAACAGTAAAACAAAAAGCCACACCCCTTATTT
TGGGCTTCTTTAATGCTAACATGGTTTTGATTGATTGGTTATATGGCTCAGTAGTACTGATAAATGCTTTGCTTATTTTG
TCCAAAAAATTTCAGAATGTGAATTATTGAGATACGAAGGGTGTAGTAATAAATATGGAAGAATTTGATTAATTGAATAT
CCTAGTGTGGCCTCTGAGTCGTCACAAAGTTGCATTTAATTTTTT--CACGCGGATAATGAGTAATGGCATCTTGAAGAG
CCCACCACATAGGGTCTTGACAAATGCAGAGAAGGAAAGGACCTCAGTAGCTATATTCTATGGCGTGGATGTGGAAACGG
TGGTTGAACCAGCACCTGGTTTGTTGGATGAGAAGCGACTGGCAAGATTCAAGAAAATAAAGGCCGAGGATTACTATGGT
ACTGTCTTTGGGCATTTCCGCCAAGGAAAAAGGCTTATCAACACCCTGATAATTTAAGCAAATCATTTTAT----GTTAG
ATTTGATTCAAGTTTTAATAGTGGTTACCTATAAATGTAATAAAGAGACGGTTTCTCTTATGTAAGGATGGATTTTCCTA
CCACCGTTGTAAAGTTCCGAGTAGCTCTTGGCCTATGCAACAACCATGAACCCTGCGGGGTTATCCAATGATGGCTTGGC
ATAAATCTTTCAGAACTATGTAATAAACTAA----ATTATATGCTACTTTTGATATTGTAATTTGAAAAGAGATATG---
TTCTTCTTTTCTTCCAGTTCGCCACATGGATAGCCCAGTCTTCGCA-CTTCCTTTGGTCCTGATTGGTTTTAATATCTCT
ACTCAAAAA--AGAGAGAGGGAGAGTACAAAAGTTCACATGTATAATTTTCACT--------------------------
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---GGCCGACAAAATAACTAATATGTTGTGTGGGTGGAGCATGGCCGTGTCGGCAGCTCCCCATTGGTATCAATCAATCT
CTAAGTAAAAACAGAGCAAATGAATCAATCTCTAAGTAATCGTTCATTCAT--AAGGAGACGAGGATGATT--------A
TAAGTC----GACGAGATGGCTATTACTACTACAAATACCATGACTAGCAACAGGAATTAATCTTGGTAGATAAAACGAT
ATAAACTAAAAA-CTAGGCGACCGATTGAGCCGAGATCTCGGTCTCTAAGAGATGGCGGTGGCGGCGGCGAGGCCGGCAT
TACTGGACCCGCGGTGGCACTGGTTGAGCAAGTCAAGGTAGAACTTGCACCGGCTGATGTCGCTCTGGGAGTGGTTGCGG
CACTGCGCGCACCAAACAATTCAACCAAACAATC-------------AATTAAAACTCTTGGCTGTCATCATACAGATCA
ATAGATAGACACATAGATAGATACTACTCCTTCCGTAAACTAATATAAAAGCATTTATATCATTACTTTATATTAGTTTA
AAGAGAGAGTAGAAGAATGATGGGTACGTAGATCGGCGAAGGCCTTGTTGTGGGCGCCGCACGAGTCGAGGGACGAATCG
GCGGCGGTGGCGGCCTGGGGCTCGGAGGAGACAACCTGGATGGTGCGTGGCCCGGCGAAGAACTCGACGAA
>chr5D_1
AAATCTTTGAGGCAAGCAATCTGGTTCTCAGTAGCTCACTAATAAGTAGAAGCGCACGGGCCAGTT--------------
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-----------ATTTTTACCATCAATTAGGAAAACTAGCCATCAACTCATGCCAGCGCACGGGCCAGTTATTTTTATAAA
AAATCATACATGGCAGAAGTATAATATTATAGAATCTGATTAAAAAATATCTATTGACTATTTTTGTGAGAAAATTTTGG
TTACTACTATTACAATCCTTTTTATGTTTGCATTGAGTACTTTAGGATAGTCTTTTTCAGGGAGACTAGTTTAATATTGT
TGATAAATATAGGGCGACTCTCTTTGTTGTGGGTTGAGGATTCCCTTTTTGGTACATGGGTTTTTACTTATTTTCTAATT
AGAGCTGGGTATGTTTCTTAGAAGTACGTGAAAGGGTAGGACTCTCTTTTCTTGAGTGTGGTTTTTTTTTTGCGTCTATT
TTCTTACGTGTGGTGCTTTAGTTTTCTTTTGTACGTGCTTGTTTTTCTTAATTGGGCCGGAATATGTGGTATAGGTACAA
ACTTAATGCCTTATCTGGTTTGGCATCATTTATACTAACTCAAGTTATATTCCAACTAAAAAAGTGGAACGGGACAACTA
TTATGTACCATGATTTATGTTTTAATCTCAACCATTGATTATTAGATCTAACGTCCGAATTAATTTGAATGATGTGGATT
GATGAGGAGC------------------TTAGTATGGAGTATATATAAAGATGTGTGTTCCTTCAGATAGAAAATATTGG
GAAGCAGATAGTGAAAGCCAAATCTGTAGTATAAATTTGATGTTTTTATGTTTTTGGATCTGTTCGTCTTTCGTCGGCAT
TCGCATGTATTCAGATTGGATCCTTCCGATCTACGCTAGTCTTCATCGGCAGCGGTTACTGTTCTGGTGCGCTGGTCCTA
TGGGGCCTTAGCACGACGACGTCCTGAGTATCAATTTGATGTTGATGATGAATTTTTCACACGGATGGTCATGTACATAA
CATTGCAGTTGCAAAGATTCTAGAGACTCGAATAGACAATCAGAGGGAATATTAGCATATCCATTTCTAATTTTGAAGGG
CTCAAGTTCTATGTGGGTTTTTTAACAACATTTTCGAGTACATGCTAATGGTGAGAGAACATACGAATCTACACCAGAAT
ATACAGAACACACAAGCAATGACCATTAACCAGCATTTAGCAAAACGAATATTTGCCCAAGCATCAAAATATTTGTGATA
AACGAAGTAACAGTATGTAGCATGACCAATGAACATGGGG-TTTGAACGAGGTACAGAGCAGAGACTGGAAAATTAAATT
GGGCCC-GCATGAGGTGGGGAGTGAGAGGATGGGAGGGGTGGTGGCCTTGATTTGGTGAGAAAGCTTAGCTTGAGAGAAC
TATAGGACATTTACATCAGTGATAGCTTAGAGATAATGTCTCAGTTAGCCAAGTGAGTGGTATTCTAGATTTCCCTATAT
TCTACCCACACTATTAACAAATTTGACATGAGACTACCCTAAGCAGCAAGCAATAGTTCCATGTGAAATA----------
-ACATATAGAAACTGAATAAAGTATGCTAATGTTTCTGTTGAATATTTGAACTTGACTTTTCCAGATCATTTGTACAGGG
ATGTGCTACTTCAGTACGCGTCAAGAACCAAGATAATAAAAGATTGTATCATGCGAGCCCTCGCAAATCTTCTAGAGCTC
GATGAGGATTACTTCATCAATAGGACCACAACCAGGGCCCGAGCATTAGCTAGGCTAGGCTACTACCCTCCATGTCCGAG
GCCTGACCTTGTTTTGGGCTTCAAGCCTCACTATGATGGTGGCGCCCTTTCAATCCTTTTCATCGAGGAGAACGTCGGTG
GCTTGCAAGTTCTGAGAAATGGAAAATGGTACAATGTTCTAGCCAAGCCTTGTACATTGTTGATCAACATAGCAGAGTGC
ATTGAGGTAGGCACCTACAAATACAAGCTACTTCATCTACTCCCTCTATGTC-AAATACTTCAGATTATGGGTCTTGGAT
TTATGTCATCTTACTTCACAATCTGAATTAATGTTCCAAGGAGTAATCAACAGTAAAACAAAAAGCCCCACCCCTTATTT
TGGGCTTCTTTAATGCTAACATGGTTTTGATTGATTGGTTATATGGCTCAGTAGTACTGATAAATGCTTTGCTTATTTTG
TCCAAATTTTTTCAGAATGTGAATTATTGAGATACGAAGGGTGTATTAATAAATATGGAAGAATTTGATTAATTGAATAT
CCTAGTGTGGCCTCTGAGTTGTCACAAAGTTGCATTTAATC--TTTTCACGCAGATAATGAGTAATGGCATCTTCAAGAG
CCCACCACATAGGGTCTTGACAAATGCAGAGAAGGAAAGGACCTCAGTAGCTATATTCTATGGCGTGGATGTGGAAACGG
TGGTTGAACCAGCACCTGGTTTGTTGGATGAGAAGCGACTGGCAAGATTCAAGAAAATAAAGGCCGAGGATTACTATGGT
ACTGTCTTTGAGCATTTCCGCCAAGGAAAAAGGCTTATCGACACCTTGATAATTTAAGCAAATCATTTTAT----GTTAG
ATTTGATTCAAGTTTTAATAGTGGTTGCCTATAAATGTAATAAAGATGCGGTTTCTCTTATGTAAGGATGGATTTTCCTA
CCACCGTTGTAAAGTTCCGAGTAGCTCTTGGCCTATGCAACAACCATGAACCCTGCGGGGTTATCCAATGATGGCTTGGC
ATAAATCTTTCAGAACTATGTAATAAACTAA----ATTATATGCTACTTTTGATATTGTAATTTGAAAAGAGATATG---
TTCTTCTTTTCTTCCAGTTCGCCACATGGATAGCCCAGTCTTCGCATCTTCCTTTGGCCCTTATTGGTTTTAATATCTCT
GCTCAAAAA--AGAGAGAGGGAGAGTACAAAAGTTCACATGTATAATTTTCACT--------------------------
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---GGCCGACAAAATAACTAATATGTTGTGTGGGTGGAGCATGGCCGTGTCGGCAGCTCCCCATTGGTATCAATCAATCT
CTGAGTAAAAACAGAGCAAATGAATCAATCTCTAAGTAATCGTTCATTCAT--AAGGAGACGAGGATGATT--------A
TAAGTC----GACGAGATGGCTATTACTACTACAAATACCATGACTAGCAACAGGAATTAATCTTGGTAGATAAACCGAT
ATAAACTAAAAA-CTAGGCGACCGATTGAGCCGAGATCTCGGTCTCTAAGAGATGGTGGTGGCGGCGGCGAGGCCGGCGT
TACTGGACCCGCGGTGGCACTGGTTGAGCAAGTCAAGGTAGAACTGGCACCGGCTGATGTCGCTTTGGGAGTGGTTGAGG
CACTGCGCGCACCAAACAATTCAACCAAACAATC-------------AATTAAAATTCTTGGCTGTCATCATACAGATCA
ATAGATAGACACATAGATAGGTACTACTCCTTCCGTAAACTAATATAAAAGCATGTATATCATTACTTTATATTAGTTTA
AAGAGAGAGTAGAAGAATGATGGGTACGTACATTGGCGAAGGCCTTGTTGTGGGCGCCGCACGAGTCGAGGGACGAATCG
GCGGCGGTGGCGGCCTGGGGCTCGGAGGAGACGACCTGGATGGTGCGTGGCCCGGCAAAGAACTCGACGAA
>chr5A_1
AAATCTTTGAGGCAAGTAATCTGGTTATCCATAGCTCACTAATAAGTAGAAGGAAATAAAACCACTATTATCTAA--TCA
TCCAGATAGCTAAATAATAAGACTGTTGAGCCAATGCATTCACACACACACACACACAAAATTTCATATAATAATTATTT
TGTGCGTAGAAAATAATGTGGTAAAGATGTTTGTACCTGTAGGTATTAACAATAAGAGTGATAAAAGTGAATG-TATTTT
AGCCACTTACTAAAATCAAAGACTGTTAAAAGCAATAGATGGCTCAAAATTTTAGTCCCTTTGGACTTAGGCATCTGGTG
GTAAAAGTGACATTTGGACCATCAATTAGGAAAATTAGCCATCAACTCATGCCAGCGCACGGGCTAGTTATTTT-ATAAA
AAATTATACATGGCAGAAGTATAATATTATAGAATCTGATTTTAAAATATCTATTGACTATTTGTGTGAGAAAATTTTGG
TTACTACTATTACAATCCTTTTTATGTCTGCATTGAGTACTTTAGGATAGTCTTTTTTAGGGAGACTAGTTTAATAGTGT
TGATAAATATAGGGCGACTCTCTTTGTTGTGGGTTGAGGATTCCCTTTTTGGTACATGGTTTTTTACTTATTTTCTAACT
AGAGCTGGGTATGTTTGTTAAAAGTACGTGAAAGGGTAGGACTCTCTTTTCTTACGTC----------------------
-------------TGCTTTAGTTTTCTTTTGTACGTGATTGTTTTTCTTAATTGGGCCAAAATATATGGTATAGGTACAA
ACTTAATGCCTTATCTGGTTTGGCATCATAAATACTAACTCAAGTTATATTCCAACTAAAAAGGTGGAACTGGACAGCTA
TTATATACCATGATTTATGTTTTAATCACAACCATTGATTATTAGATCTAACGTCCGAATTAATTTGAATGATGTGGACT
GATGAGGAGCTTAGTATGAAGCCTCAAATTAGTATGGAGTATATATAAAGATGTG-GTTCCTTCAGATAGAAAATATTGG
GAAGCAGATAGTGAAAGATAAATTTGTAGTACCAATTTGATGTTTTTTTT-------ATCTGCTCGTCTTTCATCGGCAT
TCGCGTGTCTTCAGATTGGATCCTTCCGATCTACACTACTCTTCATCGGCAGCGGTTACTGTTCTAGTGCGCTGGTCCTA
TGGGGCCTTAGCACGACGACTTCCTGAGTATCAATTTGATGTTGATGATGAATTTTTCACACTAATGGTCATGTACATAA
CATTGCAGTTGCAAAGATTCTAGAGACTCGAATAGACAATCAGAGGGAATATTAGCATATCCATTTCTAATTTTGAAGGG
CTCAAGTTCTAAGTGGGTATTTTAACAACATTTTGGACTACCTGCTAATGGCGAGAGAACATACGAATCTACACCAGAAT
ATACAGAACACACGAGCAATAACCATTAACCAGCATTTAGCAAAACAAATATTTGCTCAAGCATCAAAATATTTGTGATA
AACGAAGTAATAGTATGTAGCATGACCAATGAACATGGGGCTTTGAACGAGGTACAGAGCAGAGACTAGCAAATTAAATT
GGGCCCTACATGAGGTGGGGAGTGAGAGGATGGGAGGGGTGGCGGCCTTGATTTGGTGAGAAGGCTTAGCTTGAGAGAAC
TATAGGACCTTTGCATCAGTGATAGCTTAGAGATAATTTCTCAGTTAGCCAAGTGAGTGGTATTCTAGATTTCCCTATAT
TCTACCCACACTATTAACAAATTTGACATGAGACTACCCTAAGCAGGAAGCAATAGTTCCATGTGAAACATTTGTGAAAC
AACATATAGAAACTGAAAG-AGTATGCTAATGTTTCTGTTGAATATTTGAACTTGACTTTTCCAGATCATTTCTACAGGG
ATGTGCTACTTCACTACGCGTCAAGAACCAAGATAATAAAAGATTGTATCATGCGAACCCTGGCAAATCTTCTAGAGCTC
GATGAGGATTTCTTCATCAATAGGACCACAACCAGGGCCCGAGCTTTAGCTAGGCTAGGCTACTACCCTCCATGTCCGAG
GCCTGACCTTGTTTTGGGCTTCAAGCCTCACTATGATGGTGGTGCCCTTTCAATCCTTTTCCTCGAAGAGAACGTCGGTG
GCTTGTAAGTTCTGAGAAATGGAAAATGGTACAATGTTCTAGCCAAGCCTTATACATTGTTGATCAACATAGCAGAGTGC
ATTGAGGTAGGCACCTACAAATACAAGCTACTTCATCTACTCCCTCTATGTCAAAC-ACTTCAGATTATGGGTCTTGGAT
TTATGTCATCTTACTTCACAATCTGAATTAATGTTCCAAGGAGTAATCAACAGTAAAATAAAAAGCGACACCCCTTATTT
TGGGCTTCTTT--TGCTAACATGGTTTTGATTGATTGGTTATATGGCTCAATAGTACTGATAAATGCTTTGCTTATTTTG
TCCAAATTTTTTTAGAATGTGAATTATTGAGAAACGAAGGGTGTATTAATAAATATGGAAGAATTTGATTAATTGAATAT
CCTAGTGTGGCCTCTGAGTCGTCACAAAGTTGCATTTAATTTTTTTTCACGCAGATAATGAGTAATGGCATCTTCAAGAG
CCCACCACATAGGGTCTTGACAAATGCAGAGAAGGAAAGGACCTCAGTAGCTATATTCTATGGCGTGGATGTGGAAACGG
TGGTTGAACCAGCACCTGGTTTGTTGGATGAGAAGCGACTGGCAAGATTCAAGAAAATAAAGGCCGAGGATTAGTATTGT
ACTGTCTTTGGGCATTTCCACCAAGGAAAAAGGCTTATCGACACCCTGATAATTTAAGCAAAGCATTTTATATATGTTAG
ATTTTATTCAAGTTTTAATAGTGATTACCTATAAATGGAATAAAGAGACGGTTTCTCTTATGTAAGGATGGATTTTCCTA
TCACCGTTGTGACGTTCCGAGTAGCTCTTGGCCTATGCAACAACCATGAACCCTGTGGGGTTATCAAATGATGGCTTGGC
TTAAGTCTTTCAGAACTATGTAATAAACTACGTATATTATATGCTACTTTTGATATTGTAATTTGAAAAGAGATATACTC
TTCTTCTTTTCTTCCAGTTCGCCACATGGATAGCCCAGTCTTGGCATCTTCCTTTGGCCCTTATTGGTTTTAATATCTCT
GCTCAAAAAAGAGAGAGAGGGAGAGTACAAAAGTTCACATGTATAATTTTCACCGGCCGGGGCGGAGCCACGACCAGGGC
ACCCAGGGCCCAGGCCCGGGGCGTAGGTTTTCCTCCGGCTATATTACTTAGGTAGAATTCGTATAGGCCCGGGGTTCAGC
ACACCTGCAGCCCGCAGAGCTGAAGGCCCAAGGCTGGCTGAACACGTGCCCACGCACGCACAACCCAGGCACGACCTAAC
TCCCTCCCGTGCGCGTGATCCAACGCTCCCTTGCCGCCTACGGCCTCGTGACACCCGAGTATCCTGGTCCCTCCGCCAAG
TCCCGCTGTCCTGCGCAAGCGCGGGTGCGCGGCCCCGGCCAACTGCTGCTGGCTATAGACGTGCAGTCGCCGTCAATCTT
GCTATTGCAGACTAGGAGTGCAGATCAATCAACCACTAGTCAATCTTGCATCTGAAAAATCAGTTGTAATTTGTAAAACA
AGGTGACTTAATTGTTTCAGTACAACTGTACAAGTTAATTGAGTCCTCCATACTTTGCTTGTGTACGTCTACTACTCTAT
TGGCATGTGAACTGTTGAATTCAACTAAATAAATTTTAATTGAAAATTCTGCATATATGTATTGGCAGGTGTGAATTGCT
GAAGTCGATATTGATTCATTTTTGTGTCAATCATATTTCATGTTTGTAGAAGTAGAAGAAGAAAATATTTTCTTTGGTCG
GTCACCTGCACAGAAGGTGTCTACGCCTGGATTTCAGCTCAGGGGAATCAAGGGCCTGAAGACACTGAATCAACATCACA
GCCTTCGACTTCAAGCAACCCACTGATTTGGTACTCATTTACCAATGTTAGTTATTTCACTTCATTTTATGCCTTCTCTT
ATGAAACTATGTTTTTCATGTTTTGAAGGTGTTGGTTCTTCTTTAACTGTTGATCAGGTTACGGGTGGCAGCAAAGAAGC
ACAACATTGACTAGGTACTCTTTTGTATCCCATGCCGTTTTATTTGTTGTGTTTTATCCATTTTATTGTATTGTTAAGCA
TTAAGTTTGATACCTAATATTATTGTGCAATTGAGCCATATTGTGTATGTTCTCGTATGGGGTGTTTTTTGAGGTAGTTG
CAGCCTTATGGACGCTAAGTTTTTCCCTCATCCTAATTTTTTTTGGGCCCGGGGCTTGCACTAATCCTGGCTCCGCCACT
GCCGGCCGACAAAATAACCAATATGTTGTGTAGGTGGAGCATGGCCATGTCGGCAGCTTCCCATTGGCATCAATCAATCT
CTAAGTAAAAACAGAGCATATGAATCAATCTCTAAGTAATCATTCATTCATTCAAGGAGACGAGGAGAGACTTGAGACGA
TAAGTC----CACGAGATGTCTAGCACTACTACAAATACCATGACTGGCAACAGGAATTAATCTTGGTAGATAAACAGAT
ATGAACT-AAAAACTAGCCGACCGGTTGAGC--------CGATGTCTAAGCGATGGTGGTTGCGGTGGCGAGGCCGGCGT
TGCTGGAGCCGCGGCGGCACTGATTGAGCAAGTCAAGGTAGAACTGGCACCGGCCGATGTAGCTCCGGGAGTGGTTGAGG
CACTGCACGC-------------ACCAAACAATC-------------AATTGAAACTCTTGGCTGTCATCATACAAATAG
ATATACCTACT---------------------------------------------------------------------
---AGATACCAGAAGAAAGATGAGTACGTACGTCGGCGAAGGCCTTGTTGTGGGCGCCGCACGAGTCGAGGGACGA----
-----------------------------------------------------------------------
>chr5B_1
AAATCTTTGATGCAAGTAATCTAGTTCTCAGTAGCTCACTAATAAGTAGAAGGAAATAAAACCACTATTATCTAA--TCA
TCCAGATAGCTAAATAATAAGACTGTTGAATACTAACTCAAGTTATATTCATATCTAA----------------------
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----------TTATCTGGCTTGGCATCATGAATACTAACTCAAGTTATATTCCAACTAAAAAAGTGGAACGGGACAGCTA
TTATGTACCATGATTTATGTTTTAATCTCAACCATTGATTATTAGATCTAACGTCCGAATTAATTTGAATGATGTGGATT
GATGAGTAGCTTAGTATGGAGCCTCATATTAGTATGGAGTATATATAAAGATGTGTGTTCCTTCAGATAG-AAATATTGG
GAAGCAGATAGTGAAAGACAAATCTGTAGTATCAATTTGATGTTTTTTTGTTTTTGGATCTGTTCGTCTTTCGTCGGCAT
TCACGTGTCATCATATTGGATCCTTCCGATCTACACTACTCTTCATCGGTAGCGGTTACTGTTCTCGTGCGCTGGTCCTG
GGGGGCCTTAGCACGACGACTTCCTGAGTATCAATTTGATGTTGATGATGAATTTTTCACACTGATGGTCATGTACATAA
CATTGCAGTTGAAAAGATTCTAGAGACTCGAATAGACAATCAGAGGGAATATTAGCATATCCATTTCTAATTTTGAAGGG
CTCAAGTTCTAAGTGGGTATTTTAACAACATTTTCAACTACATGCTAATGGCGAGAGAACATACGAATATACACCAGAAT
ATACAGAACACATAT----TAACCATTAACCAGCATTTAGCAAAACAAATATTTGCTCAAGCATCAAGATATTTGTGATG
AACGAAGTAACAGTATGTAGCATGACCAATGAACATGGGGCTTTGAACGAGGTATAGAGCAGAGACTGGCAAATTAAATT
GGGCCCTGCACGAGGTGGGGAGTGAGAGGATGGGAGGAGTGGCGGCCTTGATTTGATGAGAAAGCTTAGTTTGAGAGAAC
TATAGGACCTTCACATCAGTGATAGCTTAGAGATAATGTCTCAGTTAGCCAAGTGAGTGGTGTTCTAGATTTGACTATAT
TCTACCCACACTATTAACAAATTTGACATGAGACTACCCTAAGCAGAAAGCAATAGTTCCATGTGAAACATTTGTGAAAC
AACATACAGAAACTGAATAAAGTATGCTAATGTTTCTGTTGAATATTTGAACTTGACTTTTCCAGATCATTTCTACAGGG
ATGTGCTACTTCAGTACGCGTCAAGAACCAAGATAATAAAAGATTGTATCATGCGAGCCCTGGCAAATCTTCTAGAGCTT
GATGAGGATTACTTCATCAATAGGACCACAACCAGGGCCCGAGCATTAGCTAGGCTAGGCTACTACCCTCCATGTCCGAG
GCCTGACCTTGTATTGGGCTTCAAGCCTCACTATGATGGTGGCGCCCTTTCAATCCTTTTCGTCGAGGAGAACGCCGGTG
GCTTGCAAGTTCTGAGAAATGGAAAATGGTACAATGTTCTAGCCAAGCCTTATACATTGTTGATCAACATAGCAGAGTGC
ATTGAGGTAGGCACCTACAAATACAAGCTACTTCATCTATTCCCTCTATGTCAAAATACTTCACATTATGGGTCTTGGAT
TTATGTCATCTTACTTCACATTCTGATTTAATGTTCCAAGGAGTAATCAACAGTAAAACAAAAG----------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GACTTGAGACGA
TTATATGTCAGACCAGATGGCTAGTACTACTACAAATACCATGGCTGGCAACAGGAATTAATCTTGGTAGATAAACCGAT
ATAAACT-AAAA-CTAGGCGACCGATTGAGCCGAGATCTCGATGTCTAAGCGATGGTGGTTGCGGCGGCGAGGCCGGCGT
TGCTGGAGCCGCGGCGGCACTGGTTGAGCAAGTCGAGGTAGAACTGGCACCGGCTGATGTCGCTCTGGGAGTGGTTTAGG
CACTGCAAGC-------------ACCAAACAATTCGACCAAACAATGAATTGAAACTCTTCACAGTCATCGTATAGATAG
ATAGATAGATAGATAACAGATCGATG------------------------------------------------------
----------------AAGACGGGTACTTACGTCGGCGAAGGCCTTGTTGTGAGGGCCGCACGAGTCGAGGGACGAATCG
GCGGCGGCGGTGGC---------------------------------------------------------
>SNPs
--------------------------------------------------------------------------SSS---
---------------------S----------------------------------------------------S---S-
-----S------------S--------------S---------------S----------------SSS--SSS------
-------------------------------------S------------------------S-----------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S---------S--------------------
------------------------------------------------------------------------S---S---
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
-------S------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S--------------S-------------------------------------------------------------
---------------------------------S----------------------------------------------
--S-----------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------SSS------------------------------------S----------------------------------
----------------------------------------------------S---------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S---S------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------S---------------------S-
---------------------------------------------S-------------------------------S--
--------------------------------------------------------------------------------
--------------------S---------------------------------S-------------------------
------------------------------S-------------------------------------------------
--------------------------------S-----------------------S--------------
>forward_376
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------AGCCATCAACTCATGCCAGG------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>reverse_1974
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GGAGCCCTGGCAAATCTTCT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>forward_1634
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GTGGGGAGTGAGAGGATGGA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>reverse_2635
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GAAGAG
CCCACCACATAGGG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>forward_1806
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TGACATGAGACTACCCTAAGCAT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>reverse_4719
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AT
TACTGGACCCGCGGTG----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
