>input_sequence_41853
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-----------------ATGGCTCTTGAAGCAGCGTTCCACTACCTGCAGCTCGCCGGCATCCATGGCACATCCACGCCG
GCAGTACTACTCACCATTCTCCTGC---TACTCATCATTCGACTAGCATGGGTGAGG---------ACCACAACTGCGTC
AACAAGATTCGGTAAGCAGCAACAGCTCCCGCCTTCACCCCCAGGCAAGCTGCCCATCATCGGCCACCTCCACCTCCTCG
GCTCCCAGACACACATATCCATCCGGGACCTCGATGCCAAGCATGGCCGCAATGGCCTCTTGCTCCTCCGCATCGGTGCC
GTACCCACCTTATTCGTGTCCTCGCCGAGTGCCGCCGAGGCTGTCCTGCGTACCCACGACCAAATCTTTGCGTCGCGGCC
ACCATCCATGGCCGCTGACATCATTCGCTACGGCCCCACAGACATCGCATTTGCACCCTATGGTGAGTACTGGCGGCAGG
CCAGGAAGCTCTTAACCACACATATGCTCAGCGCCAAGGTGGTGCACTCCTTCCGCCATGGTCGTCAAGAAGAGGTAAGA
ACTTTTCCTCCTGTGCAGAAACG------AATATCAACCGTTAGTTAGTCCGTCACTCATCATCTGACTCTCCGATCGAT
TGCTGCAGGTGCGCCTCGTTATCAACAAGATCCATGAGGCGGCCACCAGAGGCACGGCGGTGGACATGAGCGAGCTCCTG
TCCGGCTACACCAACGACGTCGTATGCCGTGCAGTCCTCGGAGAATCCCACCGCAAGGAAGGCCGGAACAGGCTTTTCAG
CGAGCTCACAGAGATCAACGTCTCCCTTCTTGGCGGGTTCAGCCTCGAGAATTACATCCCCCCAAACATGGTAATGGCGG
ATGTGCTCTTGAGGCTGGTTTCCGTCAAGGCTCGGCGGCTCAACAAGAGGTGGGACGAATTGTTCAACGAGATCATTGAA
GAACACCTACACCCCAGCAAACCATCATCTGGCGAGCAGCAAGCGGTAGATTTCATAGATCTTCTGCTCTCTCTCAAGGA
AGAGTACGGTCTCACTACAGATAACATCAAGGCCATCTTGGTGGTAAGTAATTACATTCACAG----TTTTCCCATTGCA
AAT--AATTGTCCATGTCCTACACTGTTGTCAT-------TACTACTAC--TACAATATTTGGAGCTGGAGGGAGTATAT
AAATAGTATATTAAGAGTTGG-----------CATGTTGCATACATAGTTAGTACTTT---TTATGTGGTGATGTTATCA
ACACACACACA--CTAAGTTGGATCCTTTGATCTTAACAGGACATGTTTGAGGCAGGCATAGAAACATCTTATCTGACGT
TGGAGTACGGCATGGCTGAGCTCATGAACAACAGACACATTCTGAAAAAATTACAGGAGGAGGTAAGATCCCAAGGCAAA
AAGTTAGACATGATAACGGAGGAGGACCTTGGCAGCATGGCCTACCTAAGGGCAACCATCAAGGAGACGCTGCGCTTGCA
CCCACCAGCGCCCTTCCTCCTCCCACACTTCTCCACCGCTGAC---TGCAAGATCGACGGATACTTGATACCCTCCAACA
CACGCGTCCTTGTGAATGCTTGGGCCCTTGGGAGGGATCCATCGTCTTGGGAGAGGCCAGAGGATTTCTTGCCTGAGAGG
TTTCTACAAGATCAAGATGGTGATGTTGACACCCAAATGAGGGGTAAGGATCTTAGGTTCCTGCCATTTGGGTTCGGGCG
GAGGATTTGTCCAGGGATGAATTTCGGGTTCGCCACCATGGAGGTTATGTTAGCAAATCTCATGTACCATTTTGATTGGG
ATGTTCCGAATATGGTGGGTACCGGCGCAGGGGTTGATATGGCCGAGTCGTTCGGGTTAACGCTTCGCCGAAAGGAGAAG
CTTCAACTTGTTCCTCGGATTCCCTAA-----------------------------------------------------
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>chr5D_1_TraesCS5D01G014300
AGCACCAGCACAAAGTAAGGTTCAAAGGAGCGTATGCAATGGCTAGGTACCTTGGACTCTTGTAGGCAAAGGTTCAATGC
GGCCACTGAAGCAATCCCGCTAGCATTTGTCCTGTTTTATTGGAATCATAATCAATCGCTTGTTATAAAAGGAAAGACTC
ACGGAACAAGATTATCAGCAGATACTCCAAGTTAACTTGGCGACTCTTGACAAAAAAGGAAGATTATATCTTTTTCTCCT
CATTTGTTTGTGATGAAAACTGTCCTCCAAGAAGTAATTTCAGAAGATTGAAAATATTCTCATAGACAACTGTTCTTCCA
TCAGGTCAAACCATGTAAACAAATAAGCCAAGAGCATTACTTTGGATGACACATATGCTTCAGGCAACCCTCAAAGCAGT
TCCACATTAATTTGGACTCGCACCAGCAGTTAGTCTGGGGCGCCCATCATGGCGTCTGTGATTAGTACAGAGAGCTTGAG
GCTTAGTGGGAACCCAATTAATTAACATGGTAAAAAGTAAAAA-------------------------------------
-----------------------------------------------------------GTGATGAATTAAAAAGCAAAG
AAGTAACCAATTAATTAACATGGTAAATGTGAAATTATCGGAATGTCATTCAAAACTCAAAGCGAAGTAGCCGTTGGTCC
CGTATATTGGCAC-GGTTGCATATATATTCAAATAGTAACGTAGAAACACGCAGAG--TATTATATTTGGAAGTGCCATA
TTCTCTACAAGAAA-----TATTATACGGTTTATTGGATGGTCAATAACTTCTTTGGCTTTGCAATACACGTACGGAAAA
GCAAGGAAACTGCAAA-------TAAGTATTTTTCTAGAGATGTTGTGTGGCTGGAGTGAATACACGTTACAGCCGTGTT
GTAAGCTCAGCCAGTGGTGGAAAACTGCACGAG-CAC-----------------TTGACATAATTGATGAAGAGCTTGAG
GCTGTGC--------TTATATAGATAGAGCTGAGTAGGAAGTAGGAACCCAACCCAGCCCAGCCATTGTAGGCTTCCTGA
TCAGTTGTGTGGACCACATGGCTCTTGAAGCAGCGTTCCACTACCTGCAGCTCGCCGGCATCCATGGCACATCCACGCCG
GCAGTACTACTCACCATTCTCCTGC---TACTCATCATTCGACTAGCATGGGTGAGG---------ACCACAACTGCGTC
AACAAGATTCGGTAAGCAGCAACAGCTCCCGCCTTCACCCCCAGGCAAGCTGCCCATCATCGGCCACCTCCACCTCCTCG
GCTCCCAGACACACATATCCATCCGGGACCTCGATGCCAAGCATGGCCGCAATGGCCTCTTGCTCCTCCGCATCGGTGCC
GTACCCACCTTATTCGTGTCCTCGCCGAGTGCCGCCGAGGCTGTCCTGCGTACCCACGACCAAATCTTTGCGTCGCGGCC
ACCATCCATGGCCGCTGACATCATTCGCTACGGCCCCACAGACATCGCATTTGCACCCTATGGTGAGTACTGGCGGCAGG
CCAGGAAGCTCTTAACCACACATATGCTCAGCGCCAAGGTGGTGCACTCCTTCCGCCATGGTCGTCAAGAAGAGGTAAGA
ACTTTTCCTCCTGTGCAGAAACG------AATATCAACCGTTAGTTAGTCCGTCACTCATCATCTGACTCTCCGATCGAT
TGCTGCAGGTGCGCCTCGTTATCAACAAGATCCATGAGGCGGCCACCAGAGGCACGGCGGTGGACATGAGCGAGCTCCTG
TCCGGCTACACCAACGACGTCGTATGCCGTGCAGTCCTCGGAGAATCCCACCGCAAGGAAGGCCGGAACAGGCTTTTCAG
CGAGCTCACAGAGATCAACGTCTCCCTTCTTGGCGGGTTCAGCCTCGAGAATTACATCCCCCCAAACATGGTAATGGCGG
ATGTGCTCTTGAGGCTGGTTTCCGTCAAGGCTCGGCGGCTCAACAAGAGGTGGGACGAATTGTTCAACGAGATCATTGAA
GAACACCTACACCCCAGCAAACCATCATCTGGCGAGCAGCAAGCGGTAGATTTCATAGATCTTCTGCTCTCTCTCAAGGA
AGAGTACGGTCTCACTACAGATAACATCAAGGCCATCTTGGTGGTAAGTAATTACATTCACAG----TTTTCCCATTGCA
AAT--AATTGTCCATGTCCTACACTGTTGTCAT-------TACTACTAC--TACAATATTTGGAGCTGGAGGGAGTATAT
AAATAGTATATTAAGAGTTGG-----------CATGTTGCATACATAGTTAGTACTTT---TTATGTGGTGATGTTATCA
ACACACACACA--CTAAGTTGGATCCTTTGATCTTAACAGGACATGTTTGAGGCAGGCATAGAAACATCTTATCTGACGT
TGGAGTACGGCATGGCTGAGCTCATGAACAACAGACACATTCTGAAAAAATTACAGGAGGAGGTAAGATCCCAAGGCAAA
AAGTTAGACATGATAACGGAGGAGGACCTTGGCAGCATGGCCTACCTAAGGGCAACCATCAAGGAGACGCTGCGCTTGCA
CCCACCAGCGCCCTTCCTCCTCCCACACTTCTCCACCGCTGAC---TGCAAGATCGACGGATACTTGATACCCTCCAACA
CACGCGTCCTTGTGAATGCTTGGGCCCTTGGGAGGGATCCATCGTCTTGGGAGAGGCCAGAGGATTTCTTGCCTGAGAGG
TTTCTACAAGATCAAGATGGTGATGTTGACACCCAAATGAGGGGTAAGGATCTTAGGTTCCTGCCATTTGGGTTCGGGCG
GAGGATTTGTCCAGGGATGAATTTCGGGTTCGCCACCATGGAGGTTATGTTAGCAAATCTCATGTACCATTTTGATTGGG
ATGTTCCGAATATGGTGGGTACCGGCGCAGGGGTTGATATGGCCGAGTCGTTCGGGTTAACGCTTCGCCGAAAGGAGAAG
CTTCAACTTGTTCCTCGGATTCCCTAAACCTACTATGTATAAGTTTATTTCGACATGAGCACAAGAATAAAGGCAAGGAA
TAAAATGACTAATAATGTAGTGCTGTTTATCAGTTATTATTACTA-----------------------------------
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---------TATATATTTC--------------------------------------AGATGGATGAGAAGTTAATTTAT
TGCACAGATCATATATGATGTACCTCAGGCGCATACATAAAGAAGAATGCAATTTGCATACATTTGAGTGGCGATAGACC
TATCTGCCACAACACGCTGCAGCCACACAGCACGCCAGCAGATGTATGTATATGTATAGGTAAAACTAATATATGTATAG
GTGAGCAAAGCACAATGGATAATAAAACTGAAAGCAAATAAGGCCTAGACAATATATGTATAGGTAACTAATCATGCATG
TATGGAGACAGATATAAGCATGTAAACATTATTTCTACAATAAAATAAATTTTACAC-----------------------
------TCACAACTCGCAAGTTATAGGGAGAGATGCTGCTGTGTGTCTAAGAAAATTTGTAATATCCTGTTCTCCAAAGG
GAATCAGTGACGATCTGATGTTTGGGCTTACCTCTAGGTAAATCATCTGTTCTGCTGTCAGATGAGTTGCCGCTGGTTGA
GGAACTTCTAGTTGAGTAGGGCTTGCGTCATCA-GTCATTTGGTCTGAGGCTAGAAAGTTGGTTTCATCATCTGACTGGT
CCTTCTCTTTGGCCGTGATCAGAGAGGGGAACTGGTCTTGTAAGGATTTTGCACGGGCATAGAGCACCGAGGC-CAGAAT
TGCTCTGCTTGGAGCTTTCTCTGGCATTTCTTGAGTTCTGCAAAATGTGCATCATCTATCATTAGTTCATTA---CTATA
CCTGTATTTTTTAGGTATGACAAAGGGGCAGAACATGTCAATTCGATAGATAGATAGATATAATACGTAAGGTAGAGTAG
TTTGATAGGCCAGGGAGGGAATAAGCATGTACTCCTAGCTGTGTGGAGAATAACGGAAGATATTTATATTAGGCATGGTT
GTGTAATATGCCTCTACATCATC
>chr5A_489
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--------GGAACCCAATTAATTAACATGGTAAAAAGCAAAGAAGTAACCAATTAAACAGCAAAAAGAAGTAACCAATTA
ATTAACATGGTAAAAACTAAAGAAGTAACAAATTAATTAACATGGTAAAAAGTAAAGAAGTAATCAATCAAAAAGCAAAG
AAGTAAACAATTAATTAACATGGTAAATGTGAAATTGTTGGAATGTCATTCACAACTCAATGTGAAGTAGTCGT-GGTCC
CGTGCATTGGCATGGGTTGCATATATACTCAAATAGTAACATAGAAACATGCAGAGAGTATTATAGTTAGAAGTGTCATC
TTCTCAATAAGAAA-----TATTATACGGTTTATTGGATGGTCCATAACTTCTTTGGCTTTGCAATGCACGCACGGAAAA
GCAAGG-------AAA-------TAAGTATTTTTCTAGAGATGTTGTGTGACTGGAGTGAATACACGTTACAGCC--GTT
GAAAGCTCAGCCAGTGGTGGAGAAGTGCACAAG-CAGTGCTATTCTGATTAGTATTGACATAATTGATGGAGAGCTTGAG
GCTGCGC--------TTATATAGATAGAGATGAGTAGGAAGTAGGAACCCAACCCAGCCCAGCCATTGTAGGCTTCCTGA
TCAGTTGTGTGGACCACATGGCTCTTGAAGCAGCGAACCACTACCTGCAGCTCGCCGGCGTCCATGGCACATCCACGCCG
GCAGTACTACTCACCGTTCTCCTGC---TACTCATCATTCGACTAGCATGGGTGAGG---------ACCGCAACCGCGTC
AACAAGATTCGGCAAGCAGCAACAGCTCCCGCCTTCACCTCCAGGCAAGCTGCCCATCATCGGCCACCTCCACCTCCTCG
GCTCCCAGACACACATATCCATCCGGGACCTCGATGCCAAGCATGGCCGCAATGGCCTCTTGCTCCTCCGCATCGGTGCC
GTACCCACCTTGTTCGTGTCCTCGCCGAGCGCCGCCGAGGCCGTCCTGCGCACCCACGACCAAATCTTTGCGTCGCGGCC
GCCATCCATGGCCGCCAACATCATTCGCTATGGGCCAACAGACATCGCGTTTGCACCCTATGGCGAGTACTGGCGGCAGG
CCAGGAAGCTCTTAACCACACATATGCTCAGCGCGAAGGTGGTGCACTCCTTCCGCCATGGTCGTCAAGAAGAGGTAAGA
ACTTTTCCTCCTGCGCAGAAACG------AATATCGACCGTTAGTTAGTCCATCACTCATCATCTGACTCTCTGATCGAT
TGCTGCAGGTGCGCCTCATTATCAACAAGATCCGTGCGGCGGCCACCAGAGGCACGGCGGTGGACATGAGCGAGCTCCTG
TCCGGCTACACCAATGACGTCGTATGCCGTGCGGTCCTAGGAGAATCCCACCGCAAGGAAGGCCGGAACAGGCTTTTCAG
CGAGCTCACAGAGATCAATGTCTCCCTTCTTGGTGGGTTCAGCCTCGAGAATTACATCCCCCCAAATATGGTAATGGCGG
ATGCGCTCTTGAGGCTGGTTTCCGTCAAGGCTCAGCGACTCAACAAGAGGTGGGACGACTTGTTCAACGAGATCATCGAG
GAACACCTACACCCCAGCAAACCATCATCTGGCGAGCAGCAAGCAGCAGATTTCATAGATCTTCTGCTCTCTCTCAAGGA
AGAGTACGGTCTCACTACGGATAACATCAAGGCCATTTTGGTGGTAA-TAATTACATTCGCAG----TTTTC-TATTGCA
AAT--AATTGTCCATGTCCTATACTATTGTCAATTTGTCATACTAGCTACTATAAC-ATTTGGAGCTGGAGGGAGTATAT
AAGTAGTATGTTAAGAGTTG-----------CCATGTTGCATATACAGTTAGTACTTT---TTATGTGGTGATGTGATAA
----ACACACA--CTAAGTTGGACCATTTGATCTTAACAGGACATGTTTGAGGCAGGCATAGAAACATCTTATCTGACGT
TGGAATACGGCATGGCTGAGCTCATGAACAACAGACACATTCTGACAAAATTACAGGAGGAGGTAAGATCCCAAGGCAAA
AAGTTAGACATGATAACGGAGGAGGACCTTAGCAGCATGGCCTACCTAAGGGCAACCATCAAGGAGACGCTGCGCATGCA
CCCACCAGCACCCTTCCTCCTCCCACACTTCTCCACCGCTGAC---TGCAAGATCGACGGATACTTGATACCCGCCAACA
CACGTGTCCTTGTGAATGCTTGGGCCCTAGGGAGGGATCCATCGTCTTGGGAGAGGCCAGAGGATTTCTGGCCTGAGAGG
TTTCTGCAGGATCAAGATGGTGATGTGGACACCCAAATGAGGGGTAAGGATCTTAGGTTCCTGCCATTTGGGTTCGGGCG
GAGGATTTGTCCAGGGATGAATTTTGGGTTCGCCACCATGGAGGTTATGTTAGCAAATCTCATGTACCATTTTGATTGGG
ATGTTCCAAATATGGTGGGTACCGGCGCAGGGGTTGATATGGCTGAGTCGTTCGGGTTAACGCTTCGCCGAAAGGAGAAG
CTTCAACTTGTTCCTCAGATTCCCTAAACCTACTATGTGTAAGTTTATTTCGA-ATGAGCACAAGAATAAAGGCAAGGAA
TAAAATGACTAATAATGTAGTACTGTTTATCAGTTATTATTACTA-----------------------------------
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---------TATACTCCCTCCATCTCAAAATAAGTGTCTAAACTTTGTTCTAGCTCTAGATGGATGAGAAGTTAATTTAT
TACACAGATCATATATGATGTACCACAGGTGCATACATAAAGAATAAAGCAATTTGCATACATTTGAGTGGCTATAGACC
TATCAGCCACAGCACGCTGCAGCCACACAGCACGCCCGGAGATGT----------------------------------G
GTGAGCAAAGCGCAATGGATAATAAAACTGAAAGCAAATACGGCCTAAACAATATATGTATAGGTAACTAATCATGCATG
TATGAACACAGATATAAGCATGTAAACATTATTTCTACAATAAAA----------------AGTGATTAAGCTCAAACTT
GAGTTGTCGCAACTCACAAGTT----------AAGCTGCTGTGTGTCTAAGACAATTAGTAACATCATA-TCTCCAAGGG
GAATCAGTGACGATCACATGTTTGAGCTTACCTCTAGATAAACCATGTGTCCTGCTGTCGTATCAGTTGCCACTGGTTGA
GGAACTTCTAGCTGAGTAGGGCTTGCTTCATCAGGTCATTTGGCCTGAGGCTAGAAAGTTGTTTTCATCATCAGACTGGT
CTTTCTCTTTGGCCGCGATCAGAGAGGGGATCTGGTCCTGTAAGGATTTTACACGGTCATAGAGCACCGAGGCCCGGGAT
TGTTCTGCTTGGAGCTTTCTCTGGCATTTCTTGAGTTCTGCAAAATGTGCATCATCTATCATTAGTTCATTATTACTATA
CCTGTATTTTTTAGGTACGAC-----------------------------------------------------------
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>chr5B_511
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------------------------------TAAAAAGAAAAGA-------------------------------------
-----------------------------------------------------------GTAACCAATTAAAAAGCAAAG
AAGTAACCAATTAATTAACATGGTAAATGTGAAATTGTTGGAATGTCATTCACAACTCAGTGTGAAGTAGTCGT-GGTCA
CGTGCATTGGCACGGGTTGCATATATACTCAAATAGTAACGTAGAAACATGCAGAGAGTATTATAATTGGAAGTGTCATC
TTTTCAATAAGAAATATTGTATTATATGGCTTATTGGATGGTCAATAACTTATTTGGCTTTGCAACACACGTACGGAAAA
GCAAGG-------TAAGTGCAAATAAGTATTTTTCTAGAGATGTTGTGTGGCTGGAGTGAATACATGTTACGGCCGTGTT
GTAAGCTCAGCCAGTGGTGGAAAACTGCACGAGACAC-----------------TTGACATAATTGATGGAGAGCTTGAG
GCTGTGC--------TTATATAGATAGAGATGAGTAGGACGTAGGAACCCAAACCCAGCCCA---------GCTTCCTGA
TCAGTTGTGTGGACCACATGGCTCTTGAAGCAGCCTTCCACTACCTGCAGCTCGCCGGCGTCCATGGCACATCCACGCCG
GCACTACTGCTCACCGTTCTCCTGC---TACTCATCATTCGACTAGCATGGGTGAGG---------ACCACAACGGTGTC
AACAAGATTCGGCAAGCAGCAGCAGCTCCCGCCTTCACCTCCAGGCAAGCTGCCCATCATCGGCCACCTCCACCTCCTCG
GCTCCCAGACACACATATCCATCCGGGACCTCGATGCCAAGCATGGCCGCAATGGCCTCTTGCTCCTCCGCATCGGTGCC
GTACCCACCTTGTTCGTGTCCTCGCCGAGCGCCGCCGAGGCCGTCCTGCGCACCCACGACCAAATCTTTGCGTCGCGGCC
GCCATCCATGGCCGCCGACATCATTCGCTACGGCCCGACAGACATCGCGTTTGCACCCTATGGTGAGTACTGGCGGCAGG
CCAGGAAGCTGTTAACCACGCATATGCTCAGCGCCAAGGTGGTGCACTCCTTCCGCCATGGTCGTCAGGAAGAGGTAAAA
ACTTATCCTCATGTGCATGTGTGCGACGAAATATCAACCA----TTAGTCCGTCACTCGTCATTGGACTCGCCA----AT
TGCTGCAGGTGCGCCTTGTTATCAACAAGATCCGTGAGGCGGCCACCAGAGGCACGGTGGTGGACATGAGCGACCTCCTG
TCCGGCTACACCAACGACGTCGTGTGCCGTGCGGTCCTCGGAGAATCCCACCGCAAGGCAGGCCGGAACAGGCTTTTCAG
CGAGCTCACAGAGATCAACGTCTCCCTTCTCGGCGGGTTCAGCCTCGAGAATTACATCCCCCCAAACATGGTAATGGCGG
ATGTGCTCTTGAGGCTGGTTTCCGTCAAGGCTCAACGACTCAACAAGAGGTGGGACGACTTGTTCAACGAGATCATTGAG
GAACACCTGCACCCCAGCAAACCATCATCCGGCGAGCAGCAAGCAGCAGATTTCATAGATCTTCTGCTCTCTCTCAAGGA
AGAGTACGGTCTCACTACGGATAACATCAAGGCCATCTTGGTGGTAA-TAATTACATTCACTTGTATTTTCC-CATTGCA
AATAAAATTGTCCATGTCCTCCTATACTG-----TTGTCATACTACTAC--TACAATTTTTGGAGCTGGAGGGAGTATAT
AAGTAGTATACTAAGAGTTCATTCACAGTTTCCATGTTGCATATATATATATAGTTAGTACTTATGTGGTCATATGATCA
ACAGACACACACGCTAAGTTGGATCGTTTGATCTTAACAGGACATGTTTGAGGCTGGCATAGAAACATCCTATCTGACGT
TGGAGTACGGCATGGCTGAGCTCATGAACAACAGACACATTCTGAAGAAATTACAGGAGGAGGTAAGATCCCAAGGCAAA
AAATTAGACATGATAACAGAGGAGGACCTTAGCAGCATGGCCTACCTAAGGGCAACCATCAAGGAGACGCTGCGCATGCA
CCCACCAGCGCCCTTCCTCCTCCCGCACTTCTCCACCGCTGAC---TGCAAGGTCGACGGATACTTGATACCCGCCAACA
CACGTGTCCTTGTGAATGCCTGGGCCCTAGGGAGGGATCCGTCGTCTTGGGAGAGGCCAGATGATTTCTGGCCTGAGAGG
TTTCTGCAGGATCAAGCTGGCGATGTGGACACCCAGATGAGGGGTAAAGATCTTAGGTTCCTGCCATTTGGGTTCGGGCG
GAGGATTTGTCCAGGGATGAATTTCGGGTTCGCCACCATGGAGGTTATGTTAGCAAATCTCATGTACCATTTTGATTGGG
ATGTTCCGAATATGATGGGTACCGGTGCAGGGGTTGATATGGCTGAGTCGTTCGGGTTAACGCTTCGCCGAAAGGAGAAG
CTTCAACTTGTTGCTCAGATTCCCTAAATCTACTATGTACAAGTTTATTTCGACATGAGCACAAGAATAAAGGCAAGGAA
TAAAATGACTACT---GTACTACTGTTTATCAGTCATTATTACGTCCTCCATTCCTAAATACTCCCTCCGTCCGGAAATA
TTTGTCATCAGAATGGATAAAAAGTGGTGTATCTAGAACTAAAATACATCTAGATACATCCCCTTTTATTCATCTTGATG
ACAAGTATTTCCGGACGGAGGGAGTATAAGTCTTTTTAGAGATTCCAATAAGAGACTACGTACAGAGCAAAATGAGTGAA
TCTACACTCTATAATATGTCTATATACATCTGTATGTAGTCCATAGTGAAATTTCTAAAAAGACTTACATTTAGGAACGG
AGGGAGTACTATATAGTTC--------------------------------------AGATGTATGAGAAGTTTATC---
--------------ATAATGTACATCAGGC-------TAAACAATAGAGCAATGAACATA-ATTTGAGCGGCGATAGACC
TATCTGCCACAACACGCTGCAGCCACATAGCACGCCCGCAGATGC----------------------------------G
GTGAGCAAAGCGGAGTGGATAAAAAAATTGAAAGCAAATAAGGTCTAAACAGTATATGTGTAGGTAACTAATCATGCATG
TATGGACACAGATATAAGCATGTAAACATTATTTCTACAGTAAAATAAAATTGTAGTCACAAGTGATTAAGCTCAAACTT
GAGTCGTTGCAACTCGCAAGTTATAGGGCGACAAGCTGCTGTGTGTCTAAGACATATTGTAA-ATCATGTTCTCCAAAGG
GAATAGGTGGCGGTCTCATGTTTGGGCTTACCTCTAGATAAACCATGTGTCCTGTTGTCAGATGAGTTGCCACTGGTTGA
GGAACTACTAGTTGAGTAGGGCTTGCGTCATCA-GTCATTTGGTCCGAGGCTAGAAAGTTGTTTTCATCATCAGACTGGT
CCTTCTCTTTGGCCCTGATCAGAGAGGGGAGCTGGTATGGTAAGGATTTTGCGCGGTCATAGAGCACCAAGGCCCAGAAT
TGCTCTGCTTGGAGCTTTCTCTGGCATTTCTTGAGTTCTGCAAAATGT--------------------------------
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>chr5D_888
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--------------------------------------------------------GACATAATTGATGGAGAGCTTGAG
GCTGTGCATGTTTATTTATATTGAGAGAGATGCATG---AGTAGGAACCCAACCCAGCCCAGCCATTGTAGGCTTCCTGG
TCAGTTG--TGGACGGCATGGCTCTTGAAGCTGCCCACCACTACCTGCAGCTCGCCGTCGGCCATGGCACATCCACGCCG
GCGGTACTCCTCATCGTCGTTGTTCCCTTACTGATGTTAGTGCTAGTATCAGTAAGA---------ACATCAGCGTCCAC
AAGA------A------AGCTGCGGCTCCCGCCTTCGCCTCCGGGCAGCCTTCCCATCATCGGCCACCTCCACCACATCG
GCGCCCAGACCCACATCTCCCTGCAGCACCTGGTCGACAAGTACGGCCACAACGGCCTCCTCTTCCTCCGCGCCGGCGCC
GTGCCCACCGTCATCGTCTCCTCGCCAAGCGCCGCCGAGGCCGTCATGCGCACCCACGACCACATCCTCGCGTCGCGCCC
GTGGTCCATGGCCTCGCACATCCTTCGCTACAACACCACTGACGTCGCCTTCTCGCCCTTGGGCGAGTACTGGCAGCACA
CCCGGAAGCTCGTCAACACGCACCTGCTCAGTGCCAAGAAGGTGCACTCCTTCCGCCATGGCCGTCAAGAAGAGGTA---
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>chr5D_977
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-------------------------------------------------------------------------TTCCTAG
TCAGCTGTCTGGACGCCATGGCTCTTGAAGCAGCGTACCACTACCTGCAGCGCGCCGTCGGCCATGGCACATCCACAGAA
GCACTACTACTCACCGTTCTCCTGC---TACTCATCATCCGAGTAGCATGGGTAAGAGCCTTCACCACCACCACCGCATC
GACAAAATGCA------AGCAGCAGCTCCCGCCTACACCTCCAGGCAAGCTGCCCATCATCGGCCACCTCCACCTCATCG
GCTCCCACCCCCACGTATCCTTCCGCGACCTCGCCGCAAAGCATGGCCGCGACGGCCTCATGCTCGTCCATGTCGGTGCG
GTGCCCACCGTGGTGGTGTCCACACCTCAGGCCGCCGAGGCCGTCCTGCGCACACACGACCACGTGTTCGCGTCCAGGCC
ACGTAACCCCGTCGCCGACATCATCCGCTACAACTCCACTGACATCGCATTCGCGCCCTACGGCGACTACTGGCGTAGGG
CTAGGAAGGTCGTCAACACGCATCTGCTCAGCGTCAAGATGGTCTACTCCAAGCGCCATGACCGCGAAGAGGAGGTA---
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>chr5B_1072
--------------------------------------------------------------------------------
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--------ACTCACCCTTCTCCTGC---TACTCATCATTCGACTAGCATGGGTGAGG---------ACCACAAT------
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------------GCCTCGTTATCAACAAGATCCGTGAGACGGCCACCAGAGGCACGGCGGTGGACATGAGCGAGCTCCTG
TCCGGCTACACCAACGACATCGTGTGCCGTGCGGTCCTCGGAGAATCCCACCGCAAGGCAGGCCGGAACAGGCTTTTCGG
CGAGCTCACGGAGATCAACGTCTCCCTTCTCGGCGGGTTCAGCCTCGAGAACTACATCCCCCCAAACATGGTAATGGCCG
ATGTGCTCTTGAGGCTGGTTTCCGTCAAGGCTCGACGACTCAACAAGAGGTGGGACGACTTGTTCAACGAGATCATTGAG
GAACACCCGCACCCCAGCAAACCATCATCCGGCGAGCAGCAAGCAGCAGATTTCATAGATCTTCTGCTCTCTCTCAAGGA
AGAGTACGGTCTCACTACGGATAACATCAAGGCCATCTTGGTGGTAA-TAATTACATTCACTTGTACTTTTCCCGTTGCA
AAT--AATTGTCCGTGTCTTCCTATACTG-----TTGTCATACTACTACAGTATAATATTTCGAGCTGGAGGGAGTATAT
AAGTAGTATATTAAGAGTTCATTCACAATTATAT------ATATATATATATA--TAGTACTTATGTGGTGATATGATCA
ACAGACACACACGCTAAGTTGGATCGTTTGATCTTAACAGGACATGTTTGAGGTAGGCATAGAAACATCTTATCTGACAT
TGGAGTACGGC---------------------------------------------------------------------
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>chr5B_2303
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--------GGCATGGCTGAGCTCATGAACAACAGACACATTCTGAAAAAATTACAGGAGGAGGTAAGATCCCAAGGAAAA
AAGTTAGACATGATAACAGAGGAGGACCTTAGCAGCATGGCCTACCTAAGGGCAACCATCAAGGAGACGCTGCGCATGCA
CCCACCAGCGCCCTTCCTCCTCCCGCACTTCTCCATCGCTGACTACTGCAAGATCGACGGATA-TTGATACCCTCCAACA
CACCCGTCCTTGTGAATGCCTGGGCCCTAGGGAGGGATCCATCGTCTTGGGAGAGACCAGAAGATTTCTGGCCTGAGAGG
TTTCTGCAGGATCAAGCTGGCGATGTGGACACCCAGATGAGGGGCAAAGATCTTAGGTTCCTGCCATTTGGGTTCGGGCG
AAGGATTTGTCCAGGGATGAATTTCGGGTTCGCCACCATGGAGGTTATGTTAGCAAATCTCATGTACCATTTTGATTGAG
ATGTTCCGAATAAGATGGCTACCAGCGCAGGGGTTGATATGGCTGAGTCGTTTGGGTTAACGCTTCGCCGAAAGGAGAAG
CTTCAACTTGTTGCTCAGATTCCCTAAACCTACTATGTATAAGTTTATTTCGACATGAGCACGAGAATAAAGGCAAGGAA
TAAAATGACTAAT---GTAGTACTGTTTATCAGTCATTATTACT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS-----------------------------S---S--------------------------------------
-------------------------------------------------------------S--S---------------
------------------------------------S-S-------------S-------S-S-------S---S-----
---SS----------------------S---------------------S---------------S---------S---S
-----S-S------------------------------------------------------------------------
------SSSSSSS-------------------------------------------------------------------
---------------------------------------------------------------------S----------
-----------------------------S--------------------------------------------------
-----------------------------------------------------------S--------------------
---------------S----------------------------------------------------------S-----
------------S--------------------------S----------------------------------------
--------------------------------------------------------------------------------
-----------S-----------------S-----------S--------S-----------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S--------------------S--------------------S
--------------------------------------------S-S---------------------------------
------------------S----------------------------S--------------------------------
-------------------------S------S-----------------------------------------------
--S-----------------S----------------------S-------------------------------S----
---S---------------------S------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S--------------------------------------------S----
--------------------------------------------------------------------------------
----------------------------S----------------------------------------S----------
-----S--S-----------------S-----------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
----------------S---------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
-S------------------------------------------S--S--------------------------------
------------------------------------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
-----------S-----------------------------------S--------------------------------
------S------------------------------------------S--SSSSS-----------------------
--------S-------------------S--S-S------------------S---------S---S-------------
----------------S--------------------S----S---S---S--------------------S--------
-------------------------------------------------------------S----------S-------
------------------------------S-------------------------S-----------------------
--------------------------------------------------------------------------------
-----------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS
>forward_434
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GACTCGCACCAGCAGTTAGT----------------------------------------------
--------------------------------------------------------------------------------
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-----------------------
>reverse_1536
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TGACATCATTCGCTACGGCC---------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------
>forward_437
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TCGCACCAGCAGTTAGTCTG-------------------------------------------
--------------------------------------------------------------------------------
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-----------------------
>reverse_1873
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------AGTCCTCGGAGAATCCCACC----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>forward_462
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------CCCATCATGGCGTCTGTGAT------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------
>reverse_2080
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
GAACACCTACACCCCAGCA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>forward_725
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------AGTAGCCGTTGGTCC
CGTAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------
>reverse_2749
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------TGGGAGGGATCCATCGTCTT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------
>forward_1470
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TATTCGTGTCCTCGCCGAGT--------------------------------------------------
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-----------------------
>reverse_3679
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AG
GTGAGCAAAGCACAATGG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
