>input_sequence_41848
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-----------------------------------------ATGCCGCCGCCACTTTCACTGCTCCACGCGCGCAAGCTC
CACGCGACGCTCCTCAAGTCCGGTCACCATGGCGACGCCTACCGCTGCAACCTCCTCCTCCGCGCCTACACCCGCGGCGG
CGCACTGGCCGACGCCCGCCACCTACTGGACCTCATGCCGTCCCCGACCCTCGTCTCCTACAACACCGTCCTCTCCGGCT
ACGCCTCCTCCTCGACCCCCGGCCTCCTTGACGCCGCCCTGCACCTGCTAGACGGGATGCCCGAAAGGGACTCCTGGTCC
TGGAACACCGCCATATCTGGCCTTGCACGCGCCGGCCGGGCTCGCGACGCGCTGCGAAGGTTCCTGCAGATGACGCGCAC
CCCCGTGGCGCCGGACGCTTTCACGTACTCCATCGTCTCGCCGTGCTGTGGCGTTGACCTAGGATCCGCGGGTCAGGTCC
ACGCGCGGGCTCTCAAGGCCGGGGTGTTCGCGGACGCCTGCGTCGGCACTAGTTTCATCAAGCTGTACGCAGAGCTGGGC
CTGATGGAGGATGCACGCAAGGTGTTCGATTGTATGCCGCTGAGAGATCTAGTGTCATGGAATGTGCTCCTGGACTGCGG
TGTGAGGTCCGGCGAAGCAGGATCATGTATGAAGGAGTTTCTTAGCATGACCGGCTGCGGGGTTCGGCCTGATGAGTTCA
CCTTTGCCACTGTCTTGAATGGTTTGGCTGAGCGGTCTGCAGGTCTAGAGGCAATGCAGGTACACTCAGTTATTCTAAAA
TCTGGATATCTTAGGGATCTTTTCCTATGCAATTGTTTGCTGGACGTGTACGGGAGATGCGGTTACGTTGACTTGGCCAA
GAAGCTGTTTGATGCTATGCTTGAGAAGGATGTTGTGTCGTGGACCGCTGTGATTTCAGGGCTTGCAGCCTGCGGTTACC
AGGCTGATGCCTTCGACATATTTTGCCAGATGCTGAAAGCTGCAATGCTGCCCAATTCATTCACATTTGGGAGCATAGTA
AGCTCATGTGCATATGTGAATGACCTTGGCAGTGGGAGGCAGTGTCATGCTCTTGCTGTCAAGCATGGGTTAGAACTTGT
TCCTATAGTTGCCAGCTGTTTTATCGATATGTACTCAAAGTGCGCCAAGATGGATGATGCAATAAGAATGTTTGAGATCA
TGCCACAGAGAGACATTGTATCTTGGAATGCAATGATATGTGGATTAGCTCAGAATGGTCAATCAGCGAGATCTCTTGAG
CTGTATGATGAAATGATGCGACTTCATTGTGAATCGGTCACCCCAAACTCAGTAACTTTTGTGAGTGTCCTGAGCGCATG
CAGCCATGCTGGTAATGTCCAAAAAGGTTGCAGCTACTTTACTCAAATGGTTAATGACTTCCACATCGAACCAATTTCAG
AGCACTACACTTGCCTTATCGATCTCTTTGCGCGAGCTGGATGGTTAGATGAAGCAGAAGAGATCATTTCAAACTTACCT
TTCAAACATGATGCTGTTATCCTGGGCACCATGCTTAATGGCTGCAGAAAATATGGTAACCTTGACATGGCTAAGCGCTT
TGCTAAGAGGCTTCTAGTGAATAATCCAGATAATGCATCGGCCATTTTTCTACTCTCAAATATGTACATTGCAAATGAAG
AATGGAGTAATGCCTCGGAGCTGAGGGATGCTGCGATTTCAAGTGGAACTCATAAAGTCATGGGGAATAGCTGGATTGAT
GTTGGTGGTCATGTACAATGTTTCAGAGCGGGTTCTAGTCCAGATGCATAATTCGAACATATATATGATGTTCTGCAACA
ACTTCAGTTGATGATGGTAGATGCTGACAAGCTGGTCACACAGATTAACTCCTTATGTACTTATATTAACAGTGAGTAG-
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr4B_1_TraesCS4B01G132900
TCGGCTAGATCCTGTCGTGGATCCAAGACCGTGGCACCGGCCTCCGGTGGATCCCAC-GGCCGCCGCTGGACGCACGGGG
AAGCCGGCGACCCCGACCATCGTTGATCCCGTGACGATGTGTCCACGAACGAACGGCTCCTTCGGCTTCAAGATGGGGAT
GCCCATGAACTGGCGCCGGCCTTCGGTGGATCCCATGGCCGCCGTTGGACGCGCGGGGAAGTCGGCGACCCCGCCCACCG
TCGACCACGCGACGATGTGTCCATGCATGAACGCCCCTTCGGCTTCGAGATGGGGACGCCCATGAACCTGACCCCCAGGA
TCTCGACCGGCGTCCAGCGACGCTCTCTCCGTCGTCGTCGTGGGCGACAAAGGAGGGATAGAATGAGGGAGGAGAGGGGC
GACGGGGTGGGGAAGGAGTGAAGGGAGGACGGAGGCGTGGGAAAAAAAGTGAAGACAGAGTAGTGGGGGGTCTGGGTTCG
TTTGGGCGACACACCTTTGACCCGAACGAGCTTCTAGGGACGACGTGGCAAGTCGGGAGCGTTGTGATGTGTGTGTTTCA
ATCATACGGCGATAAGAGCAAGTACAATAGAGCTGAGTCAGCAGGCTATAAGGAATAAACTAGTATATTTCTACTTAGTT
GGAAGAAAGAGAAGAGGAGAGAGAAGGTAAGCGGGCTCTTCGTGAAGAGCCAGCTCTAGCACGTGCTCCTAGGCACTTTA
TGAGAATGAAAGGTGAGCCACATATAAAAAAAGTAGTATACTCTTTTGATCAACTATTGTACATGTTGACTATAAGATGG
ACTGTAGATGACATGACATTGACTTATAGCCAGCAGCTGGCTATGCTATTAACCATGCTCTAAGGACATCAGAACGATTT
TGCTTCGTGCCACACGTATTAGATTTTCTAGGTTAAACTTTAAAAACTATGATCAAATTCGTAAAACCTCCTCGGCTTTC
TCAAAAAAGGTGAAAAAGAACTCATTGCCACAGTTGAATGAATGCCGCCGCCACTTTCACTGCTCCACGCGCGCAAGCTC
CACGCGACGCTCCTCAAGTCCGGTCACCATGGCGACGCCTACCGCTGCAACCTCCTCCTCCGCGCCTACACCCGCGGCGG
CGCACTGGCCGACGCCCGCCACCTACTGGACCTCATGCCGTCCCCGACCCTCGTCTCCTACAACACCGTCCTCTCCGGCT
ACGCCTCCTCCTCGACCCCCGGCCTCCTTGACGCCGCCCTGCACCTGCTAGACGGGATGCCCGAAAGGGACTCCTGGTCC
TGGAACACCGCCATATCTGGCCTTGCACGCGCCGGCCGGGCTCGCGACGCGCTGCGAAGGTTCCTGCAGATGACGCGCAC
CCCCGTGGCGCCGGACGCTTTCACGTACTCCATCGTCTCGCCGTGCTGTGGCGTTGACCTAGGATCCGCGGGTCAGGTCC
ACGCGCGGGCTCTCAAGGCCGGGGTGTTCGCGGACGCCTGCGTCGGCACTAGTTTCATCAAGCTGTACGCAGAGCTGGGC
CTGATGGAGGATGCACGCAAGGTGTTCGATTGTATGCCGCTGAGAGATCTAGTGTCATGGAATGTGCTCCTGGACTGCGG
TGTGAGGTCCGGCGAAGCAGGATCATGTATGAAGGAGTTTCTTAGCATGACCGGCTGCGGGGTTCGGCCTGATGAGTTCA
CCTTTGCCACTGTCTTGAATGGTTTGGCTGAGCGGTCTGCAGGTCTAGAGGCAATGCAGGTACACTCAGTTATTCTAAAA
TCTGGATATCTTAGGGATCTTTTCCTATGCAATTGTTTGCTGGACGTGTACGGGAGATGCGGTTACGTTGACTTGGCCAA
GAAGCTGTTTGATGCTATGCTTGAGAAGGATGTTGTGTCGTGGACCGCTGTGATTTCAGGGCTTGCAGCCTGCGGTTACC
AGGCTGATGCCTTCGACATATTTTGCCAGATGCTGAAAGCTGCAATGCTGCCCAATTCATTCACATTTGGGAGCATAGTA
AGCTCATGTGCATATGTGAATGACCTTGGCAGTGGGAGGCAGTGTCATGCTCTTGCTGTCAAGCATGGGTTAGAACTTGT
TCCTATAGTTGCCAGCTGTTTTATCGATATGTACTCAAAGTGCGCCAAGATGGATGATGCAATAAGAATGTTTGAGATCA
TGCCACAGAGAGACATTGTATCTTGGAATGCAATGATATGTGGATTAGCTCAGAATGGTCAATCAGCGAGATCTCTTGAG
CTGTATGATGAAATGATGCGACTTCATTGTGAATCGGTCACCCCAAACTCAGTAACTTTTGTGAGTGTCCTGAGCGCATG
CAGCCATGCTGGTAATGTCCAAAAAGGTTGCAGCTACTTTACTCAAATGGTTAATGACTTCCACATCGAACCAATTTCAG
AGCACTACACTTGCCTTATCGATCTCTTTGCGCGAGCTGGATGGTTAGATGAAGCAGAAGAGATCATTTCAAACTTACCT
TTCAAACATGATGCTGTTATCCTGGGCACCATGCTTAATGGCTGCAGAAAATATGGTAACCTTGACATGGCTAAGCGCTT
TGCTAAGAGGCTTCTAGTGAATAATCCAGATAATGCATCGGCCATTTTTCTACTCTCAAATATGTACATTGCAAATGAAG
AATGGAGTAATGCCTCGGAGCTGAGGGATGCTGCGATTTCAAGTGGAACTCATAAAGTCATGGGGAATAGCTGGATTGAT
GTTGGTGGTCATGTACAATGTTTCAGAGCGGGTTCTAGTCCAGATGCATAATTCGAACATATATATGATGTTCTGCAACA
ACTTCAGTTGATGATGGTAGATGCTGACAAGCTGGTCACACAGATTAACTCCTTATGTACTTATATTAACAGTGAGTAGT
GACAACTATGCTTTATTTTGATGAGTTTCAAATTCAAATTAAGTAGTATGTGCTACTTGGGTTGTTTTTGCAAGACCGAT
TTGGATAGTATTTATATGCGAGAAGGTTAGTTATTTATGCAATGCAACCTACTACGTCAGTCGACTCACAGTACTAAATC
ATTTGTTCCTGAAATCATTCATATTTGCTCAAACACCACATTTGTTTGAGTATATACATTGCAGATCTAGGAACTCTTTG
G-TTTACGCCAAAAAATGTCTACTCTTCTTTTAGATGGTTA---AGTTCCTTGTCATGGAACCAGCACACTTGGGTTCAG
ATGTGCCCATTCAGTGGTATTTCAGGTTTTCCAGTGATATTCTTTCGGTGGTATGATGTGCCCATCTACTACAAGGAGCA
TGTGGCGACTTCGTCAATCTCAAGATCTATCGGTTCAGTCTCTCGGAGATCCTGATGGGGATATCGTAGGAAGAAAGATA
GAGTACGCATTTTGGGTGGTAGGGGATAGAATGAATTAATAATCTAAGGAAGAGTTGTATCACAAAGTTACACTCACTCG
ACTCGGCATGGGGCGCGACGAGGTTACAAACAAATCGAGGGACCATTTTGCAGAAGTGTTCCGGACGCACTGAGGAGGGT
ACTTTGTTTTTGCGGGGAATTTAGAGCTTTGTTAAAAAGAATGCATTCACTGAGTTGTTAACTAGAAGACTGCTAATTAG
GAAGCTTGGAGTTTCACTAAGCCAGCTCTCGGTGACAGGCACGGTGCAACCATGCTTTGCACACAAATGTGTTGGA-CCA
TTTGCTGATCTACTTGC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------ATGTTGAAT---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TACATAGCTAGTAAATCTA
GTAGATAGCCCATCTGCTTCTAAAAGAATTGGTGCCGCAAATGAACGACTGTTGAGCTGCGTGTTTCAGAGGTTTACAAC
CTCCAGACTATCTGTTACAACCTCCAGACTGTCGGTCTACATCACCACATGAGCATGCCCTCAAAGATTTGCAAATATG
>chr4D_1
TCGGCTAGATCCCGCCATGGATCCAAGACCGTGGCGCCGGCCTCCGGTGGATCCCACAGGCCGCGGCTGGACGCGCGGGG
AAGCCGGCGACCCCGCCCACCGTCGATCCCGTGACGATGTGTCCACGCACGAACGGCTCCTCCGGCTTTAAGATGGGGAT
GCCCATGAACTGGCGCCGGCCTCCGGTGGATCCCA-GGCCGCCGTTGGACGCGCGGGGAAGTCGGCGACCCCGCCCACCG
TCAACCCCGCGACGATGTGCCCATGCACGAACGCCCCTTCGGCTTCGAGATGGGGACGCCCATGAACCTGACCCCCAGGA
TCTCGGCCGGCGTCCAGCGACGCTCTCTCTGCCGTCGTCGTGGGCGACGAAGGAGGGATATAATGGGGAGGAGCA--GGC
GACGGAGTGGGGAACGAGTGGAGGGAGGAGGGAGGCGTGGGG--AAAAGTGAAGATAGAGTAGTGGGGTGGCTGGGTTTG
TTCGGGTGACACACCTTCGACCCGAACGAGCTTCTAGGGACGACGTGGCGAGTCGGGAGCGTCGTGATGCGGC-GTTTCA
ATCATACGGAGT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TAAGGACATCATGACCATTT
TGCTTCGT----------TTAGATTTTCTAGGTTAAACTTTAAAAACTTTGATCAAATTTGTAAAACCTCGTCGGCTTTC
TCAAAAAAGGTGAAAAAGAACTCATTGCCACAATTGAATGAATGCCGCCGCCACTTTCACTGCTCCACGCGCGCAAGCTC
CACGCGACGCTCCTCAAGTCCGGTCACCATGGCGACGCCTACCGCTGCAACCTCCTCCTCCGCGCCTACACCCGCGGCGG
CGCACTCGCCGACGCCCGCGACCTACTGGACCTCATGCCGTCCCCGACCCTCGTCTCCTACAACACCGTCCTCTCCGGCT
ACGCCTCCTCCTCGACCCCCGGCCTCCTCGACGCCGCCCTGTACCTGCTAGACGCGATGCCCGAAAGGGACTCCTGATCC
TGGAACACCGCCATATCCGGCCTTGCACGCGCCGGCCGGGCTCGCGACGCGCTGCGAAGGTTCCTGCAGATGACGCGCAC
CCCCGTGGCGCCGGACGCGTTCACCTACTCCATCGTCTCGCCGTGCTGCGGCGTTGACCTAGGGTCCGCGCGTCAGGTCC
ACGCACGGGCTCTCAAGGCCGGGGTGTTCGCAGATGCCTGCGTTGGTACTGGTTTCATCAAGCTGTACGCACAGCTGGGC
CTGATGGAGGATGCACGCAAGGTGTTCGATTGTATGCCGCTGAGAGATCTGATGTCATGGAATGTGCTCCTGGACTGCGA
TGTGAGGTCCGGGGAAGCGGGATCGTGTATGAAGGAGTTTCTTAGCATGACCGGCTCCGGGGTTCGGCCTGATGAGTTCA
CCTTTGCCACTGTCTTGAATGGTTTGGCTGAGCGGTCTGCAGGTCTGGAGGCAATGCAGGTACACTCAGTTATTCTAAAA
TCTGGGTATCTTAAGGATCTTTTTCTGTGCAATTCTTTGCTGGACGTGTACGGGAGATGCGGTTACGTTGACTTGGCCAA
GAAACTGTTTGATGCTATGCTTGAGAAGGATGTCGTGTCGTGGACCGCTGTGATTTCAGGGCTTGCAGCCTGCGGTTACC
AGGCTGATGCCTTTGACATATTTTGCCAGATGCTGAAAGCTGCAATGCTGCCCAATTCCTTCACCTTTGGGAGCATAGTA
AGCTCATGTGCATATGTGAATGACCTTGGCAGTGGGAGGCAGTGTCATGCTCTTGCTGTCAAGCATGGGTTAGAACTCGT
TCCTATAGTTGCCAGCTGTTTTGTCGATATGTACTCAAAGTGCGCCAAGATGGATGATGCAATAAGAATGTTTGAGATCA
TGCCACAGAGAGACATTGTATCTTGGAATGCAATGATATGTGGATTAGCTCAGAATGGTCAATCAGCGAGATCTCTTGAG
CTGTATGATGAAATGATGCGACTTCATTGTGAATTGGTCACCCCAAACTCGGTAACTTTTGTGGGTGTCCTGAGCGCATG
CAGCCATGCTGGTGATGTCCAAAAAGGTTGCAGCTACTTTACTCAAATGGTTAATGACTTCCACATCGAACCAATTTCAG
AGCACTACACTTGCCTTATCGATCTCTTTGCGCGAGCTGGATGGTTAGATGAAGCAGAAGAGACCATTTCAAACTTACCT
TTCAAACATGATGCTGTTATCCTGGGCACCATGCTTAACGGCTGCAGAAAATATGGTAACCTTGACATGGCTAAGCGCTT
TGCTAAGAGGCTTCTAGTGAATAATCCAGATAATGCATCGGCCATTTTTCTACTCTCAAATATGTACATTGCAAATGAAG
AATGGAGTAATGCCTCGGTGCTGAGGGATGCTGCGATTTCAAGTGGAACTCATAAAGTCATGGGGAATAGCTGGATTGAT
GTTGGTGGTCAAGTACAATGTTTCAAAGCGGGCTCTAGTCCAGATGCACAATTCGAACAGATATATGACGTTCTGCAACA
ACTTCAGTTGATGATGGTAGATGCTGACAAGCTGGTCACACAGGTCAACTCCTTGTGTACTTATATTAACAGTGAGTAGT
GACAACTATGCTTTATTTTGATGAGTTTCAAATTCATATTGAGTAGTATGTGCAACTTGGGTTGTTTTGAAT-GACCGAT
TTGGATAGTATTTCTACGCGAGAAGGTTAGTTACTTATGCAATGCGACCTACTACATCAGTCGACTCACAATACTAAATC
ATGTGTTCCTGAAATCATTCATATTTACTCAAACACCACGTTTGTTTGAGTATATACATTGCAGATGTAGGAACTCTTTG
GTTTTATGCCAATAAATGTCCACTATTCTTTTAGATGGTTATTAAGTTCCTTGTCATGGAACCAACCCACTTGGGTTCAG
ATGTGCCCATTCATTGGTATTTCCGGTTTTCCAACGCTATTCTTTCAGTGGTATGATGTGCCCATCTACTACAAGGAGCA
TGCGGCGACTTCATCAATCTTAAGATCTATCGGTTCAGTCATT--GAGATCCTCATGGGGATATCGTAGGAAGAAAGATA
GAGGAGGAATTTCAGGTGGTA-GGGCTAGAATGAATTAATAGTCTA----AGAGTTTTATCACAAAGTTACACTCACTCG
ACTCGGCATGGGGCGCGACGAGGTTACAACCAAATCGAGGGACCATTTCGCAGAAGTGTTTCGGACGCAC-GAGGAGGGT
G-TTTTTTTTTGCAGGGAATTTAGAGCTTTATTCAAAAGAATGCATTCACCGAGTTGTTAACCAGAAGACTG----TCAG
AAAGCTCGGAGTTTCAGTAAGCCAGCTTTCGGTGACATGCATGGTGCAACCACGCTTCGCACCCAAATGTGTTGGA-CCA
TTTGCTGATCAACTTAC---------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------ATGTGGAATTACTTCCTCCATTTTTGTATACAAGGCCACAAGTCCACATTACAGGTACCAAGGTAA
ATATTAGTGTCGGTTTAAGCCAATGTTGAAAGCAGGCTTTCTTCCTCGTTTGACGTGTGAATTAATGTGTATTTTTCTCT
CTAACGCACAACAAGTCAACCCTCTCACTCCTCATTGGTTGATTAATGCAGCGCATGCAAACCAACCTTTTTCACTCCCG
TATGCATGCAAGGGATATTAATGTCCTTGGTTGCTAGTACGAGACAAACTCCATCAATTTTGTCTCGATTAGTGTTTAAT
GACCTTATATAGCTGCA-ATTGTAATTTTGATAGTGGCCTTATATACAAAAATGAAGAGAGTACATAGGTAGTAAATCTA
GTAGATAGCGCATCAATTTCTAAAAGAACTGGTGTCGCAACTGAAGGAACATTGAGGCAAGTGTTTCAGAGGTTTAGAAC
CTCTAGACTATC---------------------GGTCTACATCACCACATGAGCATGCCGTCGAAGATTTGCAAA----
>chr4A_897
--------------------------------------------------------------------------------
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-----------------ATTTGATTTTTTATGCTAAACTTAAAAA-CTTTGATCAAATTTGTAAAACCTCCTCGGCTTTC
TCAAAAAAGGTGAAAAATAACTCATTGCCACAGTTGAATGAATGCCGCCGCCACTTTCACTGCTCCACGCGCGCAAGCTC
CACGCGACGCTCCTCAAGTCCGGTCACCATGGCGACGCCTACCGCTGCAACCTCCTCCTCCGCGCCTACACCCGCGGCGG
CGCACTTGCCGACGCCCGCGACCTACTGGACCTCATGCCGTCCCCGACTCTCGTCTCCTACAACACTGTCCTCTCGGGCT
ACGCCTCCTCCTCGACCCCCGGCCTCCTCGACGCCGCCCTGCACCTGCTAGACGCGATGCCCGAAAGGGACTCCTGGTCC
TGGAACACCGCGATATCCGGCCTTGCACGCGCCGGCCGGGCTCACGACGCGCTGCGGAGGTTCCTGCAGATGACGCGCAC
CCCCGTGGCGCCGGACGCGTTCACCTACTCCATCGTCTCGCCGTGCTGCGGCGTTGACATGGGATCCGCGCGTCAGGTCC
ACTCGCGGGCTCTCAAGGCCGGGGTGTTCGCGGACGCCTGCGTCGGCACTGGTTTCATCAAGCTGTACGCAGAGCTGGGC
CTGATGGAGGATGCACGCAAGGTGTTCGATTGTATGCCGCTGAGGGATCTGATGTCATGGAATGTGCTCCTGGACTGCGG
TGTGAGGTCCGGGGAAGCAGGATCGTGTATGAAGGAGTTTCTTAGCATGACCGGCTGCGGGGTTCGGCCTGATGAGTTCA
CCTTTGCCACTGTCTTGAATGGTTTGGCTGAGCGGTCTGCAGGTCTGGAGGCAATGCAGGTACACTCAGTTATTCTGAAA
TCTGGGTATCTTAGGGATCTTTTTCTATGCAATTCTTTGCTGGACGTGTACGGGAGATGCGGTTACGTTGACTTGGCCAA
GAAACTGTTCGATGCTATGCTTGAGAAGGATGTTGTGTCGTGGACCACTGTGATTTCAGGGCTTGCAGCCTGCGGTTACC
AGGCTGATGCCTTTGACATATTTTGCCAGATGCTGAAAGCTGCAATGCCGCCCAATTCCTTCACCTTTGGGAGCATAGTA
AGCTCATGTGCATATGTGAATGACCTTGGCAGTGGGAGGCAGTGTCATGCTCTTGCTGTCAAGCATGGGTTAGAACTCGT
TCCTATAGCTGCCAGCTGTTTTGTCGATATGTACTCAAAGTGCGCCAAGATGGATGATGCAATAAGAATGTTTGAGATCA
TGCCACAGAGAGACATTGTAGCTTGGAATGCAATGATATGCGGATTAGCTCAGAATGGTCAATCAGTGAGATCTCTTGAG
CTGTATGATGAAATGATGCGACTTCATCATGAATCGGTCACCCCAAACTCAGTAACTTTTGTGGGTGTCCTGAGCGCATG
CAGCCATGCTGGTGATGTCCAGAAAGGTTGCAACTACTTCACTCAAATGGTTAATGACTTCCACATCGAACCAATTTCAG
AGCACTACACTTGCCTTATCGATCTCTTTGCGCGAGCTGGGTGGTTAGATGAAGCAGAAGAGATCATTTCGAACTTACCT
TTCAAACATGATGCTGTTATCCTGGGCACCATGCTTAATGGCTGCAGAAAATATGGTAATCTTGACATGGCTAAGCGCTT
TGCTAAGAGGCTTCTAGTGAATAATCCAGATAATGCATCGGGCATTTTTCTACTCTCAAATATGTACATTGCAAATGAAG
AATGGAATAATGCCTCGGAGCTGAGGGATGCTGCGATATCAAGTGGAACTCATAAAGTCATGGGGAATAGCTGGATTGAT
GTTGGTGGTCAAGTACAATGTTTCAAAGCGGGCTCTAGTCCAGATGCACAATTCGAACAGATATATGATGTTCTGCAACA
ACTTCAGTTGATGATGGTAGATGCTGACAAGCTGGTCACACGGATTAACTCCTTATGTACTTATATTAACAGTGAGTAGT
GACAACTATGCTTTATTTTGATGAGTTTCAAATTCATATTGAGTAGTATGTGCAACTTGGGTTGTTTTGAAT-GACCCAT
TTGGATAGTATTTCTATGCGAGAAGGTTAGTTACTAATGCAATGCAACCTACTACATCAGTCGACTCGCAATACTAAATC
ATGTGTTCCTGAAATCATTCATATTTACTCAAACACCACGTTTGTTTGAGTACATACGTTGCAGATGTGAGAACTCTTTG
GTTTTATGCCAATAAATGTCCACTCTTCTTTTAGATGG---TTAAGTTCCTTGTCATGGAACCAACCCACTTGGGTTCAG
ATGTGCCCATTCAGTGGTATTTCGGGTTTTCCAGCGCTAATCTTTCAGTGGTATGATGTGCCCATCTACTACAAGGAGCA
TGCAGCGACTCCGTCAATCTCAAGATCTATCGGTTCAGTCTCTCGGAGATGCTCATGGGAATATCGTAGGAAGAAAGATA
GAGGAGGCATTTCAGATGGTAGGGGCTAGAATGAATTAATAATCTAAGGAAGAGTTGTATCACAAAGTTACACTCACTCG
ACTCGGCATGG------ACGAGGTTACAAACAAATCGAGGGACCGTTTCACAAAAGTATTCTGGATGCAC-GAGGAGGGT
ACTTATTTTTTGCAGGGAATTTAGAGCTTTATTCAAAAGAATGCATTCACTGAGTTGTTAACCAGAAGACTGCTAATCAG
GAAGCTTGGAGTTTCAGTAAGCTAGCTTTCAGTGACAGGCACGGTGCAACCACACTTTGCACACAAATGTGCTGAACCCA
GTTGCTGATCTACTTAGGGCCTGTTTGGTTTTAATAAGTCATCTGGCTTATAAGTCAGGTGACTTAAAACCAATGACTTA
TAAGTCACGTCTGTTTGGTTGTCATCTGACTTATAAGTCACCTGACCACACCTTCTCATCTTGTTTTTTTTTATGAAAAA
AGGGTGGGATCCATGCAAAAGGGGATGACTTATAAGTTTTAAGTTGGGGTGGAGCAACTTATGACTTATAAGTTAGGGTG
ACTTATAAGTTGGATCAGTTTGGCAAAATAAGTCACTTTTTTCACTTTTCTACTTATAAGTTGGTGACTTATTTGGAACC
AAACAGACCCTTATATGTTGAATTACTTTCTTCATTTTTGTACATAAGGCCACAAACTCATATTACAGGTATCAAGATAA
ATATTAATGTCGGTTTAAGCCAATGTTGAAAGCAGGCTTTCCTCCTCGTTTGACGTGTGAATTAATATGTATTTTTCTTT
CCAACGCGCAACAAGCCAACCCTCTCA---CTCATTGGTTGATTAATGCAACGCATGCAAATCGATCTTC-TCATTCCCG
TATTCATGCAAAGGATATTAATGTCTTTGGTTACTAGTACGAGGCAAATCTCATCAATTTTGCCTCGATTAGTA-TTAGT
GGCTTTATATAGTTGCAAATTGTAATTTTGATAGTGGCCTTGTATACAAAAATGGAGAGAGTACATAGGTAGTAAATCTA
GTAGATAGCTCATCAATTTT-----GAACTGGTGCCACAACTAAAGGACTGTTGAGGCGAGTGTTTCAGAGGTTTAGAAC
CTCCAGACTATCA---------------------GTCTACATCACCACATGAGCATGCCCTCGAAGATTTGCAAAGATG
>SNPs
------------S-S-S------------------S----------------------------S---------S-----
---------------S---S---S-----------------------S-------------S------S-----------
----------------------S------------S--------------------------------------------
--S---S------------S-------S----------------------------------------------------
-----S-----------------------S-S----------------S-----------S----S--SS-SSS-SS---
-----S--------S-----S--------S-----------SSS-----------S------------S-S-------S-
--S---S----------S-------------------------------S------------S------S-SSS------
---------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------SS--S----
--------SSSSSSSSS-------------------------------S----------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S------------S------------------------------------------------------------
----------------------------S-------------------------S-------------------------
-----------------S--------------------------------------------------------------
------------------S-----S-----------------------S---------------------S---------
--------------------------------------------------S-----------------------------
--------------------------------------------------SS----------------------------
------------S-----------S-------------------------------------------------------
----------------------------------------------S---------------------------------
-----S-----------------S----------S---------------------------------------------
---S----------------------------------------------------------------------------
-------------S--------------------------------------------S-----S---------------
-----------------------------------------------------------------------------S--
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S-------------S------S---------------S----------S--------------------
--------------------------------------------------------------------------------
------------------------------------S---S------------S--------------SSSSS-------
-------------S-------------------S---------------------S--------------S---------
--S-----------------------S------------S--------------------------S-------------
------S-----S-------S-------------------------------------------S-S-------------
-----------------------S----------S-S---------S---------------------------------
--S--------------------------------------------------S--------------------------
---S-S------SS-----------S------------------------------------------------------
------------------------------------------------S---------------------S---------
-----S-------S----------------S--S----------------------------S--------------S--
----------------S----------S------------------------S---------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
---------S----SSS-----------S-----------S----S----------SS-S----------------S---
------------SSSSSSSSSSSSSSSSSSSSS-----------------------------S------------S---
>forward_894
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------CGATTT
TGCTTCGTGCCACA------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_1727
--------------------------------------------------------------------------------
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----------------------------------------------AGAGGCAATGCAGGTACACT--------------
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-------------------------------------------------------------------------------
>forward_1298
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------CC
TGGAACACCGCCATATCT--------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_2746
--------------------------------------------------------------------------------
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-------------------------GAGCGGGTTCTAGTCCAGATG----------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>forward_1431
--------------------------------------------------------------------------------
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----------------------------------------------------GTTGACCTAGGATCCGCGG---------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>reverse_3185
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GCACACTTGGGTTCAG
ATGTG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
