>input_sequence_41824
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------GGTCCCAAAACCCTAGCAGCCTC--CCACCCGGCGCCATCCCACCCCCGCCGCAGCCTCCTA
CCCGGCGCCATCCCACCCCCGCCGCAGCCGCAGCAACCGTAGCCCGATGGAAGTCGACAGAGCCCCGACCGCTGCCGCGG
GAGGAGGATCCTCCTCCGGCGCGATGGCGGTGGACGCGGCCGGCGGCGTGGAGAAGCCGCGGTTCGACGCGCTGATGCCA
AGCGAGATGAGCGGCGGGAGGCCACAGTACCGCAAGGTCCAGGTGCCTCCGCACCGCTTTGCGCCGCTGAAGAAGGCGTG
GCTGGAGATCTACACCCCCGTCTACGAGCACATGAAGGTCGACATCCGCATGAACCTCAAGGTTGGTAACCCGGCTCGGT
TTTCTAATGTCTCGTTGCAGCGTCCTAATAGTTAGAG---------GAAGTCGTGTGACCTGT----GTTCTCTCCCTGT
CATTTAAAGCACGCCGTTTGGTGAGTAATTATGGAGAAAATTGTTGGTCTGTTGATGATCT--TA-TCCTGTACGGTTTG
GTTCAAGCACTTGTGTATCATGGAGAAAATCCGGACTAGCTT-------------TTAAACATTTAGGTCAAAAATACAC
CCGATGCATGCCATGTTCCTTCAATTCACTGTACTAGCACTTTTATCAGGATAAAGCATATTCTGTTTTCAAACTTCAGT
GTTCAGTATTTTAATTCCCTGTGCACTTGACCTGAAAAAATGGGAGGTA-TCATGATAGTCATGGTGATAAAGTAGACTA
TTTTTCGAACTTAATTGTTCAGTGTGTTAGCAGTATGTATTGAATCTGATCGATTAGCTTTGATTAGAGGATTCTTCATG
AATTCGATCGATTGGATAAACGCTAGCAGTATGTCTTGAAGCAAGTAAACGTCTGCTGCCTATCCTGATTATTTGCATAT
ACATATTTATTTCAGTTCATCATGAT--GAAGCTACTGATTCGTATTATTGCCACCAACTGAGCACTTGACCTGATTAAT
TAGCTTAGTGGTGTTCTTATTTTTGTGGGAAAGCATAGTGTTCTAGAAGAATACAGATACACGTGAGTCAATTGGTTTGC
CTTGTGGCTGGTGTTTCTCTCATGGTTTTTGGGTCTGCAGGGAGTTCTTCCGGTGCTTATTATTGAGGCAGAACTTGTCA
GATA--TCTGAATGTTAAGCATTTTTCTGTCTCCTTTGCAGCAATTTCATTAGTCTGTTTTGTTTTTT--ACAGGCAAAA
AGGGTCGAGCTGAAGACAAGGCATGATACACCAGATGTGAGCAACCTTCAGAAGTGCGCGGACTTCGTGCATGCTTTTAT
GCTTGGATTTGACATTGCCGATGCTGTTGCCTTGCTTCGTCTTGATGACCTGTATGTGGACTCCTTCGAGATCAAGGATG
TGAAGACACTCAGAGGGGAGCATCTGTCGCGTGCCATTGGGCGCCTATCAGGGAAAGGAGGCAAGACCAAGTATGCCATC
GAGAACTCTACCAGGACTCGCATAGTTATCGCTGATACGAAGATCCACATACTCGGATCCTTTGTTAACATCAAGGTTGC
CAGGGATTCACTCTGTAGTCTTATCTTAGGTTCTCCTGCCGGCAAGGTCTATTCTAAGCTTAGGGCTGTATCTGCTAGGT
TGGCAGAAAGGTATTAGTTGAGTCTCGGTCACATTATATAGCTGCAGTTTTGGCCTTGTAAGGTGTTGTATCCGCTGATT
TGTGTCACTGTGCTATGCATTGTCTTGATACGAAGAACAACTTGGATGTGCCGAGAGATCTGTGGTGATATTCCTTGTGT
TCTGTTCTCGGCTTTTTCTTGAGAAAATGCTGTTCTGATACATGTTA---TATGTTTGCTTCGACTACTCGTTCTATATG
CCACATACTATTGTGTAA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr3D_1_TraesCS3D01G159900
CAGAGCACGGAAAGAGTCGACGGGCTTTGCTCCTCTCTTGTACATGGATGTACTCTAGTAGTTATGATCCTTATGAACTC
CCGGGTGTCGCTTTGTACCCTTCAAAAATGTATAGCAACTTAGCAACACGGTTTAGAACTGGAAGGAGTCGCCATACATG
GTTCATCAGTGTAAAGTTCAGGATATGTATGTTCCTTTTCTTGTAGATTTATACTCCCTCTGTTTCTAAATATAAGTCTC
TTTAGAAATTTCAATATGGACTACATACATAGCACAATGAGTGAATCTACACTTTAAAATACGTCTATATACATCCGTGT
GTAGTTCATATTGAAATATCTTAAAAGACATATATTTAGGAACGGAGGGAGTACATACCATGAGAGGACAAAAAGGTTGC
ATAGAAAG-AAGCAAGACTGCGAAATGTGAACTAAAGATGTGGATTTTTGTACACATGGAGTAAATTTCCACTGTGGCTT
CTTGATGGGAAAACAACACTTGACATCGCATGATCGAAACATAATGCTAATGTATACAGGAGTAAATTTCCACAGTGACA
TTATGGGTGGATCATAGGACCCCCTGAAAATATGCGGCAA----------------------------------------
-----------------CGAATTATCCCATCATGCATATCACCCAAAAAGTCCAATGCAA----------ACACATCCCA
ATTACAAAAGCTTCAAATGTGCACATCATCAGCATCTTTTTGAATTTGTGAAC-TTTTTGTCAAATTCGTGAATAAATTT
TCAATTCATGAACTTTTTTTCAAATCTGCGAACAATTTTTT---------------------------------------
----------TTTTCAACTTAAAAGTAAACAGACCGATAAAAAAACAAAAAAACATGCGTGAGTTTCTG-----------
---------TCGCTGGGCCAGGCCCATGTCGCGCAGGGGACGCGAACGAGCTGCTCTTTTTTTGTGTTTTTGGCGAAGGA
ACAATGAATGAAGCAGCCCCATCGCCTTGTAGTGGCCCAAACACAGCCTTCCACAGCCCAATATAAGCCTCTCCGTTCCA
AAGTTTTTCACTCCTCTCGGTCCCAAAACCCTAGCAGCCTC--CCACCCGGCGCCATCCCACCCCCGCCGCAGCCTCCTA
CCCGGCGCCATCCCACCCCCGCCGCAGCCGCAGCAACCGTAGCCCGATGGAAGTCGACAGAGCCCCGACCGCTGCCGCGG
GAGGAGGATCCTCCTCCGGCGCGATGGCGGTGGACGCGGCCGGCGGCGTGGAGAAGCCGCGGTTCGACGCGCTGATGCCA
AGCGAGATGAGCGGCGGGAGGCCACAGTACCGCAAGGTCCAGGTGCCTCCGCACCGCTTTGCGCCGCTGAAGAAGGCGTG
GCTGGAGATCTACACCCCCGTCTACGAGCACATGAAGGTCGACATCCGCATGAACCTCAAGGTTGGTAACCCGGCTCGGT
TTTCTAATGTCTCGTTGCAGCGTCCTAATAGTTAGAG---------GAAGTCGTGTGACCTGT----GTTCTCTCCCTGT
CATTTAAAGCACGCCGTTTGGTGAGTAATTATGGAGAAAATTGTTGGTCTGTTGATGATCT--TA-TCCTGTACGGTTTG
GTTCAAGCACTTGTGTATCATGGAGAAAATCCGGACTAGCTT-------------TTAAACATTTAGGTCAAAAATACAC
CCGATGCATGCCATGTTCCTTCAATTCACTGTACTAGCACTTTTATCAGGATAAAGCATATTCTGTTTTCAAACTTCAGT
GTTCAGTATTTTAATTCCCTGTGCACTTGACCTGAAAAAATGGGAGGTA-TCATGATAGTCATGGTGATAAAGTAGACTA
TTTTTCGAACTTAATTGTTCAGTGTGTTAGCAGTATGTATTGAATCTGATCGATTAGCTTTGATTAGAGGATTCTTCATG
AATTCGATCGATTGGATAAACGCTAGCAGTATGTCTTGAAGCAAGTAAACGTCTGCTGCCTATCCTGATTATTTGCATAT
ACATATTTATTTCAGTTCATCATGAT--GAAGCTACTGATTCGTATTATTGCCACCAACTGAGCACTTGACCTGATTAAT
TAGCTTAGTGGTGTTCTTATTTTTGTGGGAAAGCATAGTGTTCTAGAAGAATACAGATACACGTGAGTCAATTGGTTTGC
CTTGTGGCTGGTGTTTCTCTCATGGTTTTTGGGTCTGCAGGGAGTTCTTCCGGTGCTTATTATTGAGGCAGAACTTGTCA
GATA--TCTGAATGTTAAGCATTTTTCTGTCTCCTTTGCAGCAATTTCATTAGTCTGTTTTGTTTTTT--ACAGGCAAAA
AGGGTCGAGCTGAAGACAAGGCATGATACACCAGATGTGAGCAACCTTCAGAAGTGCGCGGACTTCGTGCATGCTTTTAT
GCTTGGATTTGACATTGCCGATGCTGTTGCCTTGCTTCGTCTTGATGACCTGTATGTGGACTCCTTCGAGATCAAGGATG
TGAAGACACTCAGAGGGGAGCATCTGTCGCGTGCCATTGGGCGCCTATCAGGGAAAGGAGGCAAGACCAAGTATGCCATC
GAGAACTCTACCAGGACTCGCATAGTTATCGCTGATACGAAGATCCACATACTCGGATCCTTTGTTAACATCAAGGTTGC
CAGGGATTCACTCTGTAGTCTTATCTTAGGTTCTCCTGCCGGCAAGGTCTATTCTAAGCTTAGGGCTGTATCTGCTAGGT
TGGCAGAAAGGTATTAGTTGAGTCTCGGTCACATTATATAGCTGCAGTTTTGGCCTTGTAAGGTGTTGTATCCGCTGATT
TGTGTCACTGTGCTATGCATTGTCTTGATACGAAGAACAACTTGGATGTGCCGAGAGATCTGTGGTGATATTCCTTGTGT
TCTGTTCTCGGCTTTTTCTTGAGAAAATGCTGTTCTGATACATGTTA---TATGTTTGCTTCGACTACTCGTTCTATATG
CCACATACTATTGTGTAAGCTGTGTTGTCTCTTTTTCTTTGAC---TGTATTTTATACTCTATATAACATGGCTGTGGAT
GTGGGGAATGATAAAGTTAACCTAGAATGTTGAATTGTCAGATTTGGTCCATTTTACCCTTACAAATCGACCACAGTAAT
GGTTGTGAATCGTACAGAAACTTTTGCATTTCTCTGGATCAGTATGGCGAGCCCTTCACACAGGAGGCTCACCCAAAACA
TATAGCATTGGTACAGTAATTTATTGCCATGTAAATTCATCTTAGCTTGGCTATGTTTGTTTAGATGCCATAGTTTCTTT
CTTTGGTGCTTCGTTCTTCTAATCTTGGATTACCATCCTGTGCATGCGCTGCGGTGCTTCTGCAGAGTTTGAGCTGGATA
ACAGTGCTCAA---------------------------------------------------------------------
-----------------------------------------------------------------------------TCT
CCTGCCTCCAATGGTCCTT----CTACAGCGACACCTATGACCAATCTGTCTCTCTTACGTCGTCACAGTCAGTAAGAG-
-----TTAGGATCAGACTTTAGA--AGGTAAACATGTAGTCTACATATGGTTATCCTTATGATAGCTTATATATTATTAT
TGTCTAAAGATCCGACAATTTAACTGCAATCCCTATGGTTGATACAGCGGACATGGGAAGCGGAGTGCCATAAAGGGTTT
GGTCTGCTTCTCCTGCTACAGCATGTTATCCCTGTAGTAGCTGCTACATGAAGTTTATAGAAGGATTTACATATTTGGTA
TATGTAAATGTTGGGACAAGATGCAGAAGATGTGATATGCATCCCTTCTGGCAACACCATGTAATCTCTGCTATAGCGAA
GGTACCTGCTGGTACTCTGTTCTTATACCTATTTTCTGATTCCTATTCGTTGGGCTTAGAAATCGTTAACTGGGCAACAT
TCTACTCAGCTACTATTCATACATAGACCATGATTTTAGGTCCTCAAATTATAATTATAATTTCAGCTTATCTGTAGAAA
CTATTGAGAAAAGAATTATCTTAGTCTTCCACTATATTTTATTTAAAAGCAGTGTTAGT
>chr3A_157
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CATG
GTTCATCAGTGTAAAGTTCAGGATATGTATGTCCCTGTTCTTGTAGATTTATACATATT---------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GTTGT
ATAGAAAGAAAGCAAGACTCGGAAACGTGAACTAAAGAAGTGGATCTTTGTACACATGGAGTAAATTTCCACTGTGGCTT
CTTGATC---------------------------------------------TATACAGGAGTAAATTTCCACTGTGACA
TTGTGTGTGGATCAACGGACCACAGAAAATGCTAATGACTCCAGACATTTGCGGCAACGAATTATCCTTCTTCTTTTTTT
TTTTGCGAGGAGCGCATCGAATTATCCCATCATGCATATCACCCAAAAAGTCCAATGCCAGAAAGGCTTGACACATCCCA
ATTACGAAAGCTTCAAATGTGCACATCATCAGCATGTTTTTGAATTCCCGAACTTTTTTGTCAAATCCGTGAATAATTTT
TCAACTCATGAACTTTTTTTCAAATCTGCGAACAATTTTTTAGTCCTGAACATTTTTTTAGTTCATTAACAATTTTTTAA
TTCGTATTTTTTTTCAACTTAAAAGTAAACAGACCGACAAAAAAAC-AAAAAACATGCGTGAGTTTTCTGTCGCTAGCTC
TGACTGTGCTCGCTGGGCCAGGCCCATGTCGCACAGGGGAAGGAACAGT-------------------------------
------------------CCATCGTCTTGTGCTGGCCCAAACT---CCTTCCACAGCCCAATATAAGCCTCTCCGTTCCG
AAGTTT-TCACTCCTCTCGGTCCCAAAACCCTAGCAGCCTC--CCACCCGGCGCCATCCCACCCCCGCCGCAGCCTCCTA
CCCGGCGCCATCGCACCCCCGCCGCAGCCGCATCAGCCGTAGCCCGATGGAAGTCGACAGAGCCCCGGCCGCTGCCGCGG
GAGGAGGATCCTCCTCTGGCGCGATGGCGGTGGACGCGGCCGGCGGCGTGGAGAAGCCGCGGTTCGACGCGCTGATGCCA
AGCGAGATGAGCGGCGGGAGGCCACAGTACCGCAAGGTCCAGGTGCCGCCGCACCGCTTCGCGCCGCTGAAGAAGGCGTG
GCTGGAGATCTACACCCCCGTCTACGAGCACATGAAGGTCGACATCCGCATGAACCTCAAGGTTGGTGACCCGGCTCAGT
TTTCTAGTCTGTCGTTGCAGCGTCCTAATAGTTAGGG---------GAAGTCGTGTGACCTGTGTTCGTTCTCTCCCTGT
CATTTAAAGCACGCCGTTCGGTGAGTAATTATGGAGAAATTTGTTGGTCTGTTGATGATCTTATA-TCCTGTACGGTTTG
GTTCAAGCACTTGTATATCATGGGGAAAATCCGCACTAGCTTAAAGCACCTGTGGTTAGACATTCGGGTCAAAAAGACAC
GTGATGTATGTCATGTTCCTTCAGTTCACTGTACTAGCACTTTTATCAGGATAAAACATGTTCTGTTTTCAAACTTCAGT
GTTCAGTATTTTAATTCCCTGTGCACTTGACCTGAAAAAATGGGAGGTAGTCATGATAGCCATGGTGATAAAATAGACTA
TTTTTCGAACTTGATTGTTCAGTGTTTTAGCAGTATGTATTGAATCTGATCGATTAGCTTTGATTAGAGGATTCTTCATG
AATTCGATCAATTGGATAAACGCTAGCAGTATGTCTTGAAGCAAGTAAACGTCTGCTGGCTATCCTGATTATTTGCATAT
ACATATTTATTTCAGTTCATCATGATGTGAAGCTACTGATTTGAATTATTGCCACCAACTGAGCACCTGACATGATCAAT
TAGCTTAGTGGTGTTCTTATTTTTGTGGGAAAGCATAGTGTTCTAGAAGAATACAGATACACGTGACTCAATTGGTTTGC
CTTGTGGCCGGTGTTTCTCTCATGGTTTTTGGGTCTGCAGGGAGTTCTTCCAGTGCTTATTATTGGGGCAGAACTTGTCA
GATA--TCTGAATGTTAAGCATTTCTCTGTCTCCTTTGCAGCAATTTCATTAGTCTGTTTTGTTTTTT--ACAGGCAAAA
AGGGTCGAGCTGAAGACGAGGCATGATACACCAGATGTGAGCAACCTTCAGAAGTGCGCGGACTTCGTGCATGCTTTTAT
GCTTGGATTTGACATTGCCGATGCCGTTGCCTTGCTTCGTCTTGATGACCTGTATGTGGACTCCTTTGAGATCAAGGATG
TGAAGACACTCAGAGGGGAGCATCTGTCACGTGCCATTGGGCGCCTGTCAGGGAAAGGAGGCAAGACCAAGTATGCCATC
GAGAACTCTACGAGGACTCGCATAGTTATCGCTGATACGAAGATCCACATACTTGGATCCTTTGTTAACATCAAGGTTGC
CAGGGATTCACTCTGTAGTCTTATCTTAGGTTCTCCTGCCGGCAAGGTCTATTCTAAGCTTAGGGCTGTATCTGCTAGGT
TGGCAGAAAGGTATTAGTTGAGTCTGGGTCACATTATATAGCTGCAGTTTTGGCCTTGTAAGGTGTTGTATCCGCTGATT
TGTGTCCCTGTGCTATGCATTGTCTTGATACGAAGAACAACTTCGAAGTGCCGAGAGATCTGTGGTGATATTCCTTGTGT
TCTGTTCTCGGCTTTTTCTTGAGAAAATGCTGTTCTGATACACGTTACTATATGTTTGCTTCGACTACTATTTATATATG
CCAAATACTGTTGTGTAACTTGTGTTGTCTCTTTTTCTTCAGTGTGTGTATTTTATACTCTATA--ACATGGCTATGGAT
GTGGAGAATGATCAAGTTAACCTAGAATCTTGAATTGTCAAATTTGGTCGA-TTTACCCTTACAAATTGACCACAATAAT
GGTTGTGAATCCTACAGAAAGTTCTGCATTGCTCTTGAGCAGTATGGCGAGCCCTTCTCACAGGAGGCTCACCCAAAACA
TATAGCATTGGTGCAGTACTTTATTGCCATGTAAATCCATCTTAGCTTGGCTATGTTTCTTTGGACGCCATAGTTTCTTT
CTTTGGTGCTTTGTTAATCCAATCTTGGATTACCATCCTGTGCGTGCGCTACGGTGCTTCTGCAGAGTTTGAGCTGGATA
ACAGTTCTCAAGGCCTGTTCGGAATTTCACCAGCTCCACGAAATTTCAGGAGTTGTGGAGTTAGGAAATAGCTGCTTCGC
AGTTTTCAACTGCAACTCCACCAACTCCGGGAAATTTCAGGAGTTGTGGAGTGGAGGTTCTCCGAACAGGGCCTCAATCT
CCTGCCTCCAATGGTCCTTTACACTACAGCGACACCTATAACCAATCCGTCGCACTTATGTCGTCACAGTCAGTATAAGT
TACCCTTAGGATCAGACTTTGGAGAAGGTAAACATGTAGTCTACATATGGTTATCCTTATGATAGC-TATGTATTATTAC
TGTCTCAAGATCGGACAATTTAACTGCAGC--------------------ACATGGGCAGTGGAGAGCCATAAAGGGTTT
GGTCTGCATCTCCTGCTGCAGTATGTTATCCCTGTAGTATCTGCTACATGAAGTTTATAGAAGGATTTACATATTTGGTA
TATGCAAATGTTTGGACAAGATGCAGAAGATGTGATATGCATCCCTTCCGGCAACACCATGTAATCTCTGCTACAGCGAA
GGTACCTACTGGTACTCTGTTCTAATACCTATTTTCTGATTCTTATTCCTTGGGCTTAGAAATCGTTAACTGGGCAACAT
TCTACTCAGCCACG-------CATAGACCATGATTTTAGTTCCTCAAATTACAATTAAAATTTCAGCTTATCTGTAGAAA
CTATTGAGAAAAGAATTATCTTAGTCTTCCACTATATTTT-------------------
>chr3B_924
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------TCGTCTTGTGCTGGCCCAAACT-AGCCTTCCACAGCCCAATATAAGCCTCTCCGTTCCA
AGGTGTC-CACTCCTCTCGGTCCCAAAACCCTAGCAGCCTCTCCCACCCCGCGCCATCCCACCCCCGCCGCAGCCGCA--
-----------------------------GCAGCAGCCGTAGCCCGATGGAAGTCGACAGAGCCCCGACCGCTGCCGCGG
CAGGAGGATCCTCCTCTGGCGCGATGGCGGTGGACGCGGCCGGCGGCGTGGAGAAGCCGCGGTTCGACGCCCTGATGCCA
AGCGAGATGAGCGGCGGGAGGCCACAGTACCGCAAGGTCCAGGTGCCGCCGCACCGCTTTGCGCCGCTGAAGAAGGCGTG
GCTGGAGATCTACACCCCCGTCTACGAGCACATGAAGGTCGACATCCGCATGAACCTCAAGGTTGGTAACCCGGCTGCGT
TTTCTAATGTCCCGTTGCTGCTTCTCTGAATAGTAAGAGCAAGTCCGAATTCGTGTGACCTGT----GTTCCCTTCCTCT
CATTTAAAACGCGTCATCCGGTCAGTAATTGCGGAGAAAATTATTGGTCTGCTGTTGATCATCGTTTCTTGTACTGTTTG
GTTCAAGCACTTGTGTATTATGGAGAAAATCCGCACTAGCTTGTAGCACCTGTGGTTAA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TGGGGGACAACTTGTAA
GATATCTCTGAATGTTTAGCATTTAGCTGTCTCCTTTGTAGCAATTTCATTAGTCTGTTTTTTTTCATCAACAGGCAAAA
AGGGTTGAGCTGAAAACAAGGCATGATACACCAGATGTGAGCAACCTTCAGAAGTGTGCGGACTTCGTGCATGCTTTTAT
GCTTGGATTTGACATTGCCGATGCCGTTGCCTTGCTTCGTCTTGATGACCTGTATGTGGACTCCTTCGAGATCAAGGATG
TGAAGACACTTCGAGGGGAGCATCTGTCGCGTGCCATTGGCCGCCTATCAGGGAAAGGAGGCAAGACCAAGTATGCCATT
GAGAACTCTACCAGGACTCGCATAGTTATCGCTGATACGAAGATCCACATACTTGGATCCTTTGTTAACATCAAGGTTGC
CAGGGATTCACTCTGTAGTCTTATCTTAGGTTCTCCTGCCGGAAAGGTCTATTCGAAGCTAAGGGCTGTATCTGCTAGGA
TGGCAGAAAGGTATTAGTTGAGTCTGGGTCACATTATATAGCTGCAGTTTTGGCCTTGTAAGGTGTTGTATCCGCTGATT
TGTGTCCCTGTGCTATGCATTGTCTTGATATGAAGAACAACTTGGAAGTGCCGAGAGATCTGTGGTGATATTCCTTGTGT
TCTGTTCTCGGCTTTTTCTTGGGAAAATGCTGTTCTGATACATGT---TATATGTTTGCTTCGACTACTATTTATATATG
CCAAACACTATTGTGTAAGTTGTGTGGTCTCTTTTTCTTCGA-GTGTGTATTTTATACTCTATA--GCATGGCTATGGAT
GTGGAGAATGATCAAGTTAACCTAGAATCTTGAATTGTCAGATTTGGTTGA-TTTACCCTTAGAAATGGACCACAACAAT
GGTTGTGAATCCTACAGAAAGTTTTGCATTTCTCTTGAGCAGTATGGCGAGCCCTTCGCACAGGAGGCTCACCCAAAACA
TATAGCATTGGTACAGTACTTTATTGCCATGTAAATTCATCTTAGCTTGGCTATGTTTGTTTAGATGCCATTGTTTTTCT
CTTTGGTGCTTTGTTCTTTTAATCTTGGATTACCATCCTGTGCATGCACTGCGGTGCTTCTGCAGAGTTTGAGCTGGATA
ACAGTGCTCAA---------------------------------------------------------------------
-----------------------------------------------------------------------------TCT
CCTGCCTCCAATGGTCCTTTACACTACAGTGACACCTATAACCAATCTGTCTCTCTTACGTCGTCACAGTCAGTAAGAG-
-----TTAGGATCAGACTTTGGAGAAGGTAAACATGTAGAGCATAATTGGTTTGCTACCAACATTTGGCATTGCCA----
--------------------------------------------------------------------------------
----------------------------------------------------------------------ATATTTGGTA
AGCCAACATTTGGCAAAAACAAAAGTTGCCAACTTTTGGCAACTTTTTGTGAGATTGGCAACAAGAATTGGCAAGCAACC
AATCTCTAGCCAATATTTGTAGTTC-------------------------------------------------------
----CTCAGCTACTATTCATACATATACCATGATTTTAGTTCCTCAAATTATAATTATAATTTCAGCTTATCTGTAGAAA
CTATTGAGAAAAGAATTATCTTAGTCTTCCACTATATTTT-------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
--------------------------------S---S-----------------SSSS-SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S
-------------------SS----S------------S------S----------------------------------
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S------
--S--S--------SS-----S-SSS---SSS-SSS-SSS----------------------------------------
----------------------------------------------------------S---------------------
-----S-----------------------------S----------SSS-----------------S---------S---
----S---------------------------------------------------------------------------
-------------------------------------S--------S-------------------SSS-----------
--------------------------------S-------S-SS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS------S-----SS----------SS------------------------------------
------S-------------------------------------------------------------------------
------------S----------------------S--------------------------------------------
----------------S---------------------------------------------------------------
-----------------------------------------------S--------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
---------------------------------S------------------------------SS---------S----
SS----S---S------------S-------------------------------S---S--------------------
-----------------------------------------------------------S------------S-------
------------S------------S------------------------------------------------------
---------S------------------------------------------------S---------------------
-----------------------------------------S-S----------------------S----S----S---
------------------------------------------------------------------S-------------
--------S------------------------------------------S-------------S--------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
------S---------------------------------------S---------------------------------
---------------------------------------------------------------------SS--S------
---S---------------S-------------------S--S---------------------SS--------S-----
----S-------S---------------S--------------------S-S---------------S-------S----
-----------S--------S--------------S--S------------------S----------------------
------------------S-------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------S---------------------------------------------S---S--------S
-----S------S---------------SSSSSSSSSSSSSSSSSSSSSS-------S--S----S--------------
-------S---------S---S-----------------S----------------------------------------
----S-------------------------------------------S------------------------S------
-------S----------------------------------S-----S-------------------------------
---------------------------------------S----------------------------------------
----------------------------------------SSSSSSSSSSSSSSSSSSS
>forward_41
---------------------GGGCTTTGCTCCTCTCTTGT---------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_1762
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-CGATGCATGCCATGTTCCTT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_585
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GGTGGATCATAGGACCCCCT-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_2505
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TGTTGCCTTGCTTCGTCTTG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_2147
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------ATTGCCACCAACTGAGCACT-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_3802
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------ATACAGCGGACATGGGAAGC-------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------
