>input_sequence_41800
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-------------------------------------ATGCCGCTCCGCGACGGCTGCCGGCGGCGGCTCCAGCGCGCCC
GCGGCCTCTGTCTCGCCGCGGCGCTGTGCGTGCTCGCGCTCGCGCTCGCGTCGGACGCCTCGCCGGCGCCGGTGTCGCTG
CTGGGCATCAACTACGGCCGCGTGGGAAACAACCTGCCGCCGCCGCAGGCCGCGCTGCCCCTGCTCCAGGGCCTCGGCAT
TGCCCGCGTGCGGCTCTACGACCCCGAGCCCGGCGTGCTGCGCGCCTTCGCCAAGACCGGGATCGAGCTCTACGTCGGCG
TCCCCGACCAGTGCCTCGCCGCGGTCGCCGAGCCGGCCGGCGCCACGTCCTGGCTCAAGGACAGCATCCTGCCCTACCTG
CCGGACACCAAGATCGTCGCGCTCACCGTGGGCAACGAGGTGCTCACGGGCAACGACACCGCGCTCACCCGCAACCTGCT
CCCGGCCATGGAGTCCCTCCACGGCGCGCTCGCCGCGGCAAACCTCGACAAGCAGATCGCCGTCACGACCGCGCACAACC
TCGGCGTCCTCGGGACGTCCTACCCGCCCTCGGCGGGGGCCTTCCGGAAGGACCTGCTCCAGTACCTCTGCCCCATCCTC
GACTTCCACGCCAAGACCGGCTCGCCGTTCCTGGTGAACGCCTACCCCTACTTCGCCTACTCCGACGACCCCAAGGGCAT
CCATCTGGACTACGCTCTCCTCGAGCCGAGCAACCCCGGCGTCCCGGACGCCAACACCGGGCTGCACTATCCCAACCTCC
TCGTGGCGCAGGTCGACGCGGCGTACCACGCCATCTCGGCGGCGAACAGCGCGGCGGCGCGGACGGTGGAGATACGGATC
TCCGAGACGGGGTGGCCCTCCGCGGGGGACGCCAACGAGAAGGCCGCGACGCCGGAGAGCGCGGCCCGGTACAACAGCAA
CGTGATGCGGCTGGTGGCGGAGTGGAAGGGCACGCCGCTCAAGCCCAACGTGCCGCTGCGCGTCTACGTGTTCGCGCTAT
TCAACGAGAACATGAAGCCCGGGCCGGCGTCCGAGCGCAACTACGGCCTGTTCAAGCCCGACAGCACGCCGGTGTACCCG
CTCACGTACAAGCCCGCGCGCGGCGACTTCACCCCCGGCGGCAACAGCACCGGCGGAGACAACGGCTACTACGACATCTC
GGCCGCGTCGCGGGAGCCCACGGTGAGCTCTAGTCTATT--TCTCTCAGTTGTTCATGCTTACATTGACCTTTAGGGGTT
TGTCTGCGGAAGGGGGATGACACTTTAGGTGATGGCATCATTTCTCGCTGCTTTTGCGCACTCGAGAGTGCACATGCCGT
AGGTTGACCACGGTCGACTCTCAACGCAGTTCAGATTGTGCAATTAGAAAAGTTTCCAGCGTAATCAACATCAACGTCAG
TTGTTTATTCCACACAGATCCAGATTCTGGCAATCGTCATCTCGAAAATTAGGTGTGACCCCTCCGTCACCATCGACCAG
ATTCTTGTTTCCCCCCTGAGTAGGAACTCGACATCATTCTCAGGTTTCAAAAAAACTGCTCACTTTCCTTGTGGAAATAA
AAAAGGCTTCCAAAATAAACAA------------GT------------AGATCTGGTGACTCCAGCAAGAGATAGTAGAT
CTGGAGTTCTCACTTCCTGCTACTTGATAGTCAAAATGCCAAATGCGCGTCTAGAATCGAATGAAGTCTCCGGCAGGTGT
TCTTTCCGGGACCGATCTGATTGTCCTTTTTCTCAGTAAAATCAATGTTCCTCATTTTACTGCTTTCCTCATGTGGCGTT
TCTCGTTTGTTTTTGGCTTGTGATTCAAAAGGGTTGCCGGTGGACATGGGTGCAAGCTGCTGTGGCAGGAGGTGCGGCTG
CTGCCCTCATGGTCGCAGCCTGA---------------------------------------------------------
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--
>chr4A_1_TraesCS4A01G067900
CATGAAACTCCAACGTCATGTGCTCAAGCATGGACGAGTCCTCACAGATGGTTCCATCTTCACGTGTCAAGGGTGTGGTG
TGCGT------------------------CGACCAATAGCATCATTCTGGCGCTGACCCTGGTTTCATACTAGCCCATGG
GCCCAAGAAAATTGACGGGCTGCACTCATCAGCAGTTTGGCTAAAAAGAACAACGAGTTTGTTGTATTCATCTTCTTTTG
CTAGCACTCTGTGCCACATTATTGACTTTGGATGAAATCAATTCCTTGCAGCAATGCACTACTCGCACTCCCTCCGTTTT
TATTTATTCCACATATTAGTTTTAATTGGAGTCAAACTTTATAAAATTTGACCAAA-TTTTAGAAAACAATTGAACATTT
ACATCAACAAATTTATATGATGTGAAATACATGCAATGATAT------------ATATTTGATGGTGTATTATGTTAATA
TATTTTTTACAAACTTGTTGAAAAAATATGAAGTTTAAGCTTAGACAAACCTAATATGCAAAGTAAATAAAAACAAAAGG
AGTAGT-GAAAAATGAGACCTTTTGCAACGTCTACTTGCGATGGGCGGCTCCCCCACCCCTGCCACCGTCACGTGTGTGC
CACAGTAG-----GCACCAACGTTTCCCATGCTTGGACGGCCCCAGAAATACAGCCGTTGCGGCGGCACCGGCACGGTCC
ACGGCCTACGGGCACAGTCTCGCGTGCCGCCC------ATCGGATCCCATTCCACGGAC------TACTCCAGTAAACAA
CCCCC-GTTGTCTCGCTGTCTCCGGGTCCCACGTGCAGAACTCCCAACGCTTCGTGTCGGTAAAAAAAAGATACTGTGCT
ACTATCGCCGTTTCAGTTCTGTCGGTAA--CTTCACCCGATCGCCTTCTACTCCCCAAAT-----------CTCACTCTT
CCTTCCCACATACCCACCTCCAACCTCCAATCACTCTCCCCCCGCCCCAAAACCTTCGTCCGCGCAAATCTCACCTCGCT
CTCCCCTA--------TCCCGCTCCACTCCTCCAATAATGCCGCTCCGCGACGGCTGCCGGCGGCGGCTCCAGCGCGCCC
GCGGCCTCTGTCTCGCCGCGGCGCTGTGCGTGCTCGCGCTCGCGCTCGCGTCGGACGCCTCGCCGGCGCCGGTGTCGCTG
CTGGGCATCAACTACGGCCGCGTGGGAAACAACCTGCCGCCGCCGCAGGCCGCGCTGCCCCTGCTCCAGGGCCTCGGCAT
TGCCCGCGTGCGGCTCTACGACCCCGAGCCCGGCGTGCTGCGCGCCTTCGCCAAGACCGGGATCGAGCTCTACGTCGGCG
TCCCCGACCAGTGCCTCGCCGCGGTCGCCGAGCCGGCCGGCGCCACGTCCTGGCTCAAGGACAGCATCCTGCCCTACCTG
CCGGACACCAAGATCGTCGCGCTCACCGTGGGCAACGAGGTGCTCACGGGCAACGACACCGCGCTCACCCGCAACCTGCT
CCCGGCCATGGAGTCCCTCCACGGCGCGCTCGCCGCGGCAAACCTCGACAAGCAGATCGCCGTCACGACCGCGCACAACC
TCGGCGTCCTCGGGACGTCCTACCCGCCCTCGGCGGGGGCCTTCCGGAAGGACCTGCTCCAGTACCTCTGCCCCATCCTC
GACTTCCACGCCAAGACCGGCTCGCCGTTCCTGGTGAACGCCTACCCCTACTTCGCCTACTCCGACGACCCCAAGGGCAT
CCATCTGGACTACGCTCTCCTCGAGCCGAGCAACCCCGGCGTCCCGGACGCCAACACCGGGCTGCACTATCCCAACCTCC
TCGTGGCGCAGGTCGACGCGGCGTACCACGCCATCTCGGCGGCGAACAGCGCGGCGGCGCGGACGGTGGAGATACGGATC
TCCGAGACGGGGTGGCCCTCCGCGGGGGACGCCAACGAGAAGGCCGCGACGCCGGAGAGCGCGGCCCGGTACAACAGCAA
CGTGATGCGGCTGGTGGCGGAGTGGAAGGGCACGCCGCTCAAGCCCAACGTGCCGCTGCGCGTCTACGTGTTCGCGCTAT
TCAACGAGAACATGAAGCCCGGGCCGGCGTCCGAGCGCAACTACGGCCTGTTCAAGCCCGACAGCACGCCGGTGTACCCG
CTCACGTACAAGCCCGCGCGCGGCGACTTCACCCCCGGCGGCAACAGCACCGGCGGAGACAACGGCTACTACGACATCTC
GGCCGCGTCGCGGGAGCCCACGGTGAGCTCTAGTCTATT--TCTCTCAGTTGTTCATGCTTACATTGACCTTTAGGGGTT
TGTCTGCGGAAGGGGGATGACACTTTAGGTGATGGCATCATTTCTCGCTGCTTTTGCGCACTCGAGAGTGCACATGCCGT
AGGTTGACCACGGTCGACTCTCAACGCAGTTCAGATTGTGCAATTAGAAAAGTTTCCAGCGTAATCAACATCAACGTCAG
TTGTTTATTCCACACAGATCCAGATTCTGGCAATCGTCATCTCGAAAATTAGGTGTGACCCCTCCGTCACCATCGACCAG
ATTCTTGTTTCCCCCCTGAGTAGGAACTCGACATCATTCTCAGGTTTCAAAAAAACTGCTCACTTTCCTTGTGGAAATAA
AAAAGGCTTCCAAAATAAACAA------------GT------------AGATCTGGTGACTCCAGCAAGAGATAGTAGAT
CTGGAGTTCTCACTTCCTGCTACTTGATAGTCAAAATGCCAAATGCGCGTCTAGAATCGAATGAAGTCTCCGGCAGGTGT
TCTTTCCGGGACCGATCTGATTGTCCTTTTTCTCAGTAAAATCAATGTTCCTCATTTTACTGCTTTCCTCATGTGGCGTT
TCTCGTTTGTTTTTGGCTTGTGATTCAAAAGGGTTGCCGGTGGACATGGGTGCAAGCTGCTGTGGCAGGAGGTGCGGCTG
CTGCCCTCATGGTCGCAGCCTGAGGTACTGAGATCATCATGGAGTGTGC-----CACTC--GTCTTGATGGCTGAGATTC
AGGGGTCGGTGGATAGGAC-GGAATAGAATTGCCTGCTCTGGAGCAATGGTGTTGATGATGATGATGATCCTGATCCTCT
GCACGGCGTTCTTTTGCCGTTGTGGTTGCTGAAGACGAAGACTGAGACCGAGATGTGGATCTGGGTAAGCTGATGAAACG
ATTAATTTTATGGCATCGAAGCTATGTATTTCATCTTGGTGCCTTAAAAACCGCTGATCGTTGGGACTAAAATAGACCCA
AATCAGTCGGTTTTAATTGCCTTTTAATAGAAATGTTCTCTTGAGTGGTACCCCAGTACTGCTATCTATAAATATGCATG
AAGTACAAAAGCTGAAGCCCAGTATCCCTTTCCAAATAATGAAAAATAAATT--------AAGTTCATCTGAATTCGTCA
ACTTCGAGCGGTTAAAATAGTGTGATAATGTTGCGATTGCTCAAGTCCAGAAGGTTAGGCCAACTCCACCGCGTTGACCC
TATCCTGTCTGGCCCCGTCCGTTTGGAGTAAAACGGACAAAGGAGGCGGCTCAGCGCGCGACGGCCCGGACTCATCTTGT
CCGTTTTGTGTCCGGGCCGACCCATTTCGAGCGCAAACTTGCGCCGGGTTTGGGTCGCGGCGGACACCAAACGGACGCGC
GCTCGTCCGCGTCGGGGCCGCGTGGCAGGCGGCCACCTACCTCCCACCCGCCCACATCAATGCGCACAAGCGGGCGGCCC
CACCTGTCATCCGCACGTCGAGCGGTCGCCGTCCTTCTTTAAGTGGGAAGCATGGACGGGTCGTCGTCCACACTGCCCCA
CGCCACCTCGCGGCCTCCTC-AAACCCGACAGCGGCGACCACGT-CCC-AAACCCTAGCCTAGACCTCGTCGGCCGGCCG
CCCCGCAGCCATGGGCCTCTGAAACTACGGCCGCAAAGGCAGGCATGACCGCGAGGCCGGCTCCTCGTCGGGACGCCGCC
GC
>chr4B_1
CATGAAACTCCAACGTCATGTGCTCAAGCATGGACGAGTCCTCACAGATGGTTCCATCTTCACGTGTCAAGGGTGTGATG
TGCGTCGACCAGTAGCATTTTTTTTAGCACGACCAATAGCATCATTCTGGCGCTGACCCCGGTTTCACACTAGCCGATGG
GCCCAAGAAAATTGACGGGCTGCACCCATCAGCAGTTTGGCTAAAAAGAACAGCGAGTTTGTTGTATTCATCTTCTTTTG
CTAGCACTCTGTGCTGCATTATTGAGGTTGAATGAAATCAATTCCTTGCAGCAATGCACTACTCGCACTCCCTCCGTTTT
TATTTATTCTG-------------------------CTTTATAAAATTTGATCAAGCTTATAGAAAACAATAAAAGATTT
ACAGTAACAAATTTATATGATGTGAAATATATGCAATGATAAATTCAATGATACATATTTGATGGTGTATTATGTTAATA
TTTTTTTTGCAAACTTGTTAAAAATATATGAAGTTTAACTTTAGACAAATTTAATACGCGCAGTAAATAAAATCCGAGGG
AGTAGTGGAAAAACGAGACCTTTTGCAACGTCTACTTGCCATGGGCGGCTCCCCCATCCCTGACTCCGTCACGTGTGTGC
CACAGTACGCAACGCACCAACGTTTCCCATGCTTGGACGGCCCCAGAAATACAGCCGTTGCGGCGGCGCCGGCACGGT--
-----CTACGGGCACAGTCTCTCGTGCCGCCC------ATCGGATTCCATTCCACGGAG------TACTCCAGTAAACAA
CCCCCCGTTGTCTACCTGTCTCCGGGTCCCACGTACAGAACCCCCCACGTCTCGTGTCGGTAAAAAAAAAGGA-------
--TATCGCCGTTTCAGTTCTGTCGGTAAAACTTCACCCGATCGCCTTCTACTCCCCAAAT-----------CTTACTCCA
TACCC-----------------ACCTCCAATCACTCTCCCCCCGGCCCAAAACCTTCGTCCGTGCAAATCTCACCCCGCT
CTCCTCCCTCCCTCCGTCCCGCTCCACTCCTCCAATAATGCCGCTCCGCGACGGCTGCCGGCGGCGGCTCCAGCGCGCCC
GCGGCCTCTGTCTCGCCGCGGCGCTGTGCGTGCTCGCGCTCGCGCTCGTGTCCGACGCCTCGCCGACGCCTGTGTCGCTA
CTGGGCATCAACTACGGCCGCGTGGGGAACAACCTCCCGCCGCCGCAGGCCGCGCTGCCCCTGCTCCAGGGCCTCGGCAT
TGCCCGCGTGCGGCTCTACGACCCCGAGCCCGGCGTGCTGCGCGCCTTCGCCAAGACCGGGATCGAGCTCTACGTCGGCG
TGCCCGACCAGTGCCTCGCCGCGGTCGCCGAGCCAGCCGGCGCCACGTCCTGGCTCAAGGACAGCATCCTGCCCTACCTG
CCGGACACCAAGATCGTCGCGCTCACCGTGGGCAACGAGGTGCTCACGGGCAACGACACCGCGCTCACCCGCAACCTGCT
CCCGGCGATGGAGTCCCTCCACGGCGCGCTCGCTGCGGCCAACCTCGACAAGCAGATCGCCGTCACGACCGCGCACAACC
TCGGCGTCCTCGGGACGTCCTACCCGCCCTCCGCGGGGGCCTTCCGGAAGGACCTGCTCCAGTACCTCTGCCCCATCCTC
GACTTCCACGCCAAGACCGGCTCGCCGTTCCTGGTGAACGCCTACCCTTACTTCGCCTACTCCGACGACCCCAAGGGCAT
CCATCTGGACTACGCTCTTCTCGAGCCGAGCAACCCCGGCGTCCCGGACGCCAACACCGGGCTGCACTATCCCAACCTCC
TCGTGGCGCAGGTGGACGCCGCGTACCACGCCATCTCGGCGGCGAACAGCGCGGCGGCGCGGGTGGTCGAGATACGGATC
TCCGAGACGGGGTGGCCCTCCGCGGGCGACGCGAACGAGAAGGCCGCGACGCCGGAGAGCGCGGCTCGGTACAACAGCAA
CGTGATGCGGCTGGTGGCGGAGTGGAAGGGCACGCCGCTCAAGCCCAACGTGCCGCTGCGCGTCTACGTGTTCGCGCTGT
TCAACGAGAACATGAAGCCCGGGCCGGCGTCCGAGCGCAACTACGGCCTGTTCAAGCCCGACAGCACGCCGGTGTACCCG
CTCACGTACAAGCCTGCGCACGGCGACTTCACCCCGGGCGGCAACAGCACCGGCGGAGACAACGACTACTACGACATCTC
GGCCGCGTCGCGGGAGCCCACGGTGAGCTCTACTCTTCTTCTCTGTCACTTGTTCATGCTTACATTGACCTTTTGGT---
-------GGAAAGGAGATGACACTTTGGGTGATTGCATCATTTCTCGCTGCTTTTGCGCACTCGAGAGTGCACATGCCGT
AGGTTGACCACGGTC-----TCAACGTAATTCAGATTGTGCAATTAGAAAAATTTCCTGCGTAATCGACATCAACATCAG
TTGTTTATTCCACACAGATCCAGATTCTGGCAATCGTCATCTTGAAAATTAGGTGTGACCCCTCCGTCACCATCGACCAG
ATTCTTCTTTCCTCCCTGTGTAGAAACTTGACATCATTCTCAGGTTTCAAAACACTGTCCAC--TTCTTTGTGGAAAGGA
AAAAGGCTTCCAAACTAAATAA------------GTATACAAAATAGTAGATCCGGTGACTCCAGCAAGAGATAGTAGAT
CTGGAGTTCTCACTTCCCGTTATTTGATAGTCAAAATGCCAAATGCGCGTCTAGAATCGAATGCAGTGTCCGGTAGGTGT
TCTTTACGGGGCCGATCTGTTTGTCCTTTTTCTCAGTAAAATCAATGTTCCTCATTTTATTGCTTTCCTCATGTGGTGTT
TCTCGTTTGTTTGTTGCTTGTGATTCAAAAGGGTCGGCGGTGGACGTGGGCGCAAGCTGCTGTGGCAGGAGGTGCTGCTG
CCGCCCTCATGGTTGCAGCCTGAGGTACTGAGATCATCATGGAGCGTGC-----CACTCTCGTCTTGATGGCTGAGATTC
AGGGGTAGGTAGATAGGAAGGGAATATAACTGCCTGCTCTGGAGCAATGGTGT------TGATGATGATCCTGATCCTCT
GCACGGCGTTCTTTTGCCGTTGTGGTTGCTGAAGACGAAGACTGAGTCCGAGATGTGGATCTGGGTAAGCTCATGAAACG
ATTAATTTGATGGCATCGACGCTATGTATTTCATCTTGGTGCCTTAAAAACCGCTGATCGTTGGGACTAAAATAGACCCA
AATCATTCGGTTTTAATTGCCCTTTAATAGAAATGTTCTCTTGAGTAGTACCCCAATACTGCTATCTACAAATATACATG
AGGTGCAAAAGCTGAAG---------------------------------------------------------------
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>chr4D_531
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--------AAAAATGAGACCTTTTGCAACGTCTACTTGCCATGGGCGGCTCCCCCGTCCCTGACTCCGTCACGTGTGTGC
CACAGTAC-----GCACCAACGTTTCGCATGCTTGGGCGGCCCCAGAAATACAGCCGTTGCGGCGGCACCGGCACGGTCT
ACGGCCTACGGGCACAGTCTCTCGTGCCGCTGCCGCCTATCGGATCCCATTCCACGGAGTACTCCTACTCCAGTAAACAA
CCCCC-GTTGTCTCGCTGTCTCCGGGTCCCACGTACAGAACCCCCAACTTTTCCTGTCGGT--AAAAAAAGGA-------
--TATCGCCGTTTCAATTTTGTCGGTAA--TTTCACCCGATCGCCTTCTACTACCCCCAATCTTACTCTTCCTTCCCCCA
CACCC-----------------ACCTCCAATCACTCTCCCCC-GCCCCAAAACCTTCGTCCGTGCAAATCTCACCTCGCT
CTCCTCCCTCCCTCCGTCCCGCTCCACTCCTCCAATAATGCCGCTCCGCGACGGCTGCCGGCGGCAGCTCCAGCGCGCCC
GCGGCCTCTGTCTCGCCGCGGCGCTGTGCGTGCTCGCGCTCGCGCTCGTGTCGGACGCCTCGCCGACACCGGTGTCGCTG
CTGGGCATCAACTACGGCCGCGTGGGGAACAACCTGCCGCCGCCGCAGGCCGCCCTGCCCCTGCTCCAGGGCCTCGGCAT
TGCCCGCGTGCGGCTCTACGACCCCGAGCCCGGCGTGCTGCGCGCCTTCGCCAAGACCGGGATCGAGCTCTACGTCGGCG
TGCCCGACCAGTGCCTCGCCGCGGTCGCCGAGCCAGCCGGCGCCACGTCCTGGCTCAAGGACAGCATCCTGCCCTACCTG
CCCGACACCAAGATCGTCGCGCTCACCGTGGGCAACGAGGTGCTCACGGGCAACGACACCGCGCTCACCCGCAACCTGCT
CCCGGCCATGGAGTCCCTCCACGGCGCGCTCGCCGCGGCCAACCTCGACAAGCAGATCGCCGTGACGACCGCGCACAACC
TCGGCGTCCTCGGGACGTCCTACCCGCCCTCCGCGGGGGCCTTCCGGAAGGACCTGCTCCAGTACCTCTGCCCCATCCTC
GACTTCCACGCCAAGACCGGCTCGCCGTTCCTGGTGAACGCCTACCCCTACTTCGCCTACTCCGACGACCCCAAGGGCAT
CCACCTGGACTACGCTCTTCTCGAGCCGAGCAACCCCGGCGTCCCGGACGCCAACACCGGGCTGCACTATCCCAACCTCC
TCGTGGCGCAGGTCGACGCCGCGTACCACGCCATCTCGGCGGCGAACAGCGCGGCGGCGCGGGTGGTCGAGATACGGATC
TCCGAGACGGGGTGGCCTTCCGCAGGGGACGCGAACGAGAAGGCCGCGACGCCGGAGAGCGCGGCCCGGTACAACAGCAA
CGTGATGCGGCTGGTGGCGGAGTGGAAGGGCACGCCGCTCAAGCCCAACGTGCCGCTGCGCGTCTACGTGTTCGCGCTGT
TCAACGAGAACATGAAGCCCGGGCCGGCGTCCGAGCGCAACTACGGCCTGTTCAAGCCCGACAGCACGCCGGTGTACCCG
CTCACGTACAAGCCTGCGCACGGCGACTTCACCCCCGGCGGCAACAGCACCGGCGGAGACAACGACTACTACGACATCTC
GGCCGCGTCGCGGGAGCCCACGGTGAGCTCTGCTCTT-TTCTCTGTCAGTTGTTCATGCTTACATTGACCTTTAGGGGTT
TGTCTGCGGAAAGGGGATGACACTTTGGGTGATTGCATCATTTCTCGCTGCTTTTGCGCACTCGAGAGTGCACATGCCGT
AGGTTGACCACGGTC-----TCAACGTAATTCAGATTGTGCAATTAGAAAAATTTCCTGCGTAATCGACATCAACATCAG
TTGTTTATTCCACACAGATCCAGATTCTGGCAATCGTCATCTTGAAAATTAGGTGTGACCCCTCCGTCACCATCGACCAG
ATTCTTCTTTCCTCCATGAGTAGGAACTTGACATCATTCTCAGGTTTCAAAACACTGCTCAC--TTCTTTGTGGAAATGA
AAAAGGCTTCCAAACTAAATAATCATACAAAATAGT------------AGATCTGGTGACTCCCGCAAGAGATAGTAGAT
CTGGAGTTCTCACTTCCCGCTACTTGATAGTCAAAATGCCAAATGCGCGT-TAGAATCGAATGCAGTCTCCGGCAGGTGT
TCTTTCCGGGACCGATCTGATTGTCC-TTTTCTCAGTAAAATCAATGTCCCTCATTTTATTGCTTTCCTCATGTGGCGTT
TCTCGTTTGTTTTTGGCTTGTGATTTAAAAGGGTCGGCGGTGGACATGGGCGCAAGCTGCTGTGGCAGGAGGTGCTGCTG
CCGCCCTCATGGTTGCAGCCTGAGGTACCGAGATCATCATGGGGTGTGGTGCGTCACTCTCGCCTTGATGGCTGAGATTC
AGGGGTAGGTGGATAGGAC-GGGATGGAACTGTCTGCTCTGGAGCAATGGTGT------TGATGATGATCCTGATCCTCT
GCACGGCGCTCCTTTGCTGTTGTGGTTGCTGAAGGT------TGAGACCGAGATGTGGATCTGGGTAAGCTGATGAAACG
ATTAATTTGATGGCATCGAAGCTATGTATTTCATCTTGGTGCCTTAAAAACCGCTGATCGTTGGGACTAAAATAGACCCA
AATCAGTCGGTTTTAATTGCCTTTTAATAGAAATGTTCTCTTGAGTAGTACCCCAGTACTGCTACCTACAAATATACATG
AGGTGCAAAAGCTGAAGCCCAGTATCCCTTTCCAAATAATGAAAATAAATGAAGTTACTCAATTTCATCTGAATTCGTCA
ACTTGGAGCGGTTAAACTACTGTGATAATGTTGCGATTGCTCAAGTCCAGAAGGTTA-----------------------
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>chr7A_3361
CTCAAGTGAACAACGT----------------------------------------------------------------
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-----------------------------------------------------GTAAGGCCAACTCCACCGCGC-GACCC
TATCCTGTCCGGCCCCGTCCGTTTGGGGTAAAACGGACAAAGGAGGCGGCCCAGCGCGCGACGGCCCGGACCCATCTTGT
CCATTTTGTGTCCGGACCGACCCATTTCGAGCGCAAACTTGCGCCGGGTTTGGGTCGCGGCGGACACCAAACGGACGCGC
GCTCGTCCGCGTCGGGGCCGCGTGGCAGGCAGCCACCTACCTCCCACCCGCCCACATCAATGCGCACGAGCGGGCGCCCC
CACCTGTCATCCGCACGTCGAGCGGTCGTCGTCCTTCTTTAAGTGGGAAGCGTGGACGGGTCGTCGTCCACACTGCCCCA
CGCCACCCCGCGGCCTCCTCGAAACC-GACAGTGGCGACCACGT-CCCAAAACCCTAGCCTAGACCTCGCC-GCCGGCCG
C-CCGCAGCCATGGGCCTCTGGAACTACGGCCGCAAAGGCAGGCACGACCGCGAGGCCGGCTCCTCGTCGGGACGCCGCC
GC
>chr5A_3374
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----------------------------------------------------GGTAAGGCCAACTCCACCGCGC-GACCC
TATCCTGTCCGGCCCTGTCCGTTTGGGGTAAAACGGGTAAAGGAGACGGCCCAGCACGCGACGGCCCGGACCCATCTTGT
CCGTTTTGTGTTCGGGCCGACCCATTTCGAGCGCAAACTTGCGCTGGATTTGGGTCGCGGCGGACACCAAACGGACGCGC
GCTCGTCCGCGTCGGGGCCGCGTGGCAGGCGGCCACCTACCTCCCACCCGCCCACATCAATGCGCACGAGCGGACGGCCC
CACCTGTCATCCGCGCGTCGAGCGGTCGCCGTCCTTCTTTAAGTGGGAAGCGTGGACGGGTCGTCGTCCACACTGCCCCA
CGCCACCCCACGGCCTCCTCGAAACCCGACAGCGGCGACCACGT-CCC-AAACCCTAGCCTAGACCTCGCCGGCCAGCCG
C-CCGCAGCCATGGGCCTCTGGAACTACGGCCGCAAAGGTAGGCACGACCGCGAGGCCGGCTCCTCGTCGGGACGCCGCC
G-
>chr2A_3375
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-----------------------------------------------------GTTGGCCTAACTCCACCGCGC-GACCC
TATCATGTCCGCCCCCGTCCGTTTGGGGTAAAACGGACAAAGGAGGCGGCCCAGCGCGCGACGGCCCGGACCCATCTTGT
CCGTTTTGTGTTCGGGCCGACCCATTTCGAGCGCAAACTAGCGCCGGGTTTGGGTCGCGGCGGACACCAAACGGACGCGC
GCTCGTCCGCGTCGGGGCCGCGTGGTAGGCGGCCACCTACCTCCCACCCGTCCACATCAATGCGCACGAGCGGGCAGCCC
CACCTGTCATCCGCACGTCGAGCGGTCGCCGTCCTTCTTTAAGTGGGAAGCGTGGACGGGTCGTCATCCACACTGCCCCA
CGCCACCCCGCGGCCTCCTCGAAACCCGACAGCGGCGACCACGT-CCC-AAACCCTAGCCTAGACCTCGCCGGCCGGCCG
C-CCGCAGCCATGGGCCTCTGGAACTACGGCCGCAAAGGCAGGCACGACCGCGAGGCCGGCTCCTCATCGGGACGCCGCC
GC
>chr6A_3375
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-----------------------------------------------------GTAAGGCCAACTCCACCGTGC-GACCC
TATCTTGTCCGGCCCCGTCCGTTTGGGGTAAAACGGACAAAGAAGGCGGCCGAGCGCGCGACGGCCCGGACCTATCTTGT
CCGTTTTGTGTCCGGGCCAACCCATTTCGAGCGCAAACTTGCGCCGGGTTTGGGTCGCGGCGGACACCAAACGGACGCGC
GCTCGTCCGCGTCGGGGCCGCGTGGCAGGCGGCCACCTACCTCCCACCCGCCCACATCAATGCGCACGAGCGGGCGGCCC
CACCTATCATCCGCACGTCGAGCGGTCGCCGTCCTTCTTTAAGTGGGAAGCGTGGACGGGTCGTCGTCCACACTGCTCCA
CGCCACCCCGCGGCCTTCTCGAAACCCGACAGCGGCGACCACGTACCA-AAACCCTAGCCTAGACCTCGCCGGCCGGCCG
C-CCGCAGCCATGGGCCTCTGGAACTATGGCCGCAAAGGCAGGCACGACCGCGAGGCCGGCTCCTCGTCGGGACGCCACC
GC
>chr3A_3376
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------------------------------------------------------TTAGGCCAACTCCACCGCGC-GATCC
TATCCTGTCCGGCCC-GTCCGTTTAGGGTAAAATGGACAAAGAAGGCGGCCCAGCGCGCGACGGTCCGGACCCATCTTGT
CCGTTTTGTGTCCGGGCCGACCCATTTCGAGCGCAAACTTGCGTCGGGTTTGGGTCGCGGCGGACACCAAACGGACGCAC
GCTCGTCCGCGTCGGGGCCGCATGGCAGGCGGCCACCTACCTCCCACCCGCCCACATCAATGCGCACGAGCGGGCGACCC
CACCTGTCATCCGCACGTCGAGCGGTCGCCGTCCTTCTTTAAGTGGGAAGCGTGGACGGGTCGTCGCCCACACTGCCCCA
CGCCACCCCGCGGCCTCCTCGAAACCCGATAGCGGCGACCACGT-CCC-AAACCCTAGCCTAGACCTCGCCGGCCGGCCG
C-CCACAGCCATGGGCCTCTGGAACTACGACCGCAAAGGCAGGCACGACCGCGAGGCCGGCTCCTCGTCGGGACGCCGCC
GC
>chr1A_3378
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--------------------------------------------------------AGGCCAACTCCACCGCGC-GACCC
TATCCTATCCGGCCCCGTCCGTTTGGGGTAAAACGGACAAAGGAGGTGGCCCAGCGCGCGACGGCCCGGACCCATCTTGT
CCGTTTTGTGTCCGGGCCGACCCATTTCGAGCGCAAACTTGCGCCGGATTTGGGTCGCAGCGGACACCAAACGGACGCGC
GCTCGTCCGCGTCGGGGCCGCGTGGCAGACGGCCACCTACCTCCCATCCGCCCACATCAATGCGCACGAGCGGGCGGCCC
CACCTGTCATCCGCACGTCGAGCGGTCGCCGTCCTTCTTTAAGTGGGAAGCGTGGACGGGTCGTCGTCCACACTGCCCCA
CGCCACCCCGCGGCCTCCTCGAAACCCGACAGCGGCGACCACGT-CCC-AAACCCTAGCCTAGACCTCGCCGGCCGGCCG
C-CCGCAGCCATGGGCCTCTGGAACTACGGCCGCAAAGGCAGGCACGACCGCGAGGCCGGCTCCTCGTCGGGATGCCGCC
GC
>chr2A_3378
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--------------------------------------------------------AGGCCAACTCCACCGCGC-GACCC
TATCCTGTCCGGCTCCATCTGTTTGGGGTAAAACGGACAAAGGAGGCGGCCCAGCGCGCGACGG-CCGGACCTATCTTGT
CCGTTTTGTGTCCGGGCCGACCCATTTCGAGCGCAAACTTGCGCCGGGTTTGGGTCGCGGCGGACACCAAACAGACGCGC
GCTCGTCCGCATCGGGGCCGTGTGGCAGGCGGCCACCTACCTCCCACCCGCCCACATCAATGCGCACGAGCGGGCAGCCC
CACCTGTCATCCCCACGTCGAGCGGTCGCCGTCCTTCTTTAAGTGGGAAGCGTGAACGGGTCGTCGTCCACACTGCCCCA
CGCCACCCCGCGGCCTCCTCGAAACCCGACAGCGACGACCACGT-CCC-AAACCCTAGCCTAGACCTCGCCGGCCGGCCG
C-CCGCAGCCACGGACCTCTGGAACTACGGCCGCAAAGGCAGGCACGACCGCGAGGCCGGCTCCTCGTCGGGACGCCGCC
GC
>chr5A_3378
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--------------------------------------------------------AGGCCAACTCCACCGCGC-GACCC
TATCTTGTCCGGCCCCGTCCGTTTGGGGTAAAACGGACAAAGAAGACGGCCCAGCGCGCGACGGCCTGGACCCATCTTGT
CCGTTTTGTGTCCGGGCCGACCCATTTCGAGCGCAAACTTGCGCCGGGTTTAAGTCGCGGCGGACAGCAAACGGACGCGC
GCTCGTCCGCGTCGGGGCCGCGTGGCAGGCGGCCACCTACCTCCCACCCGCCCACATCAATGCGCACGAGCGGGCGGCCC
CACGTGTCATCCGCACGTCGAGCGGTCGCCGTCCTTCTTTAAGTGGGAAGTGTGGACGGGTCGTCGTCCACACTGCCCCA
CGCCACCCCGCGGCCTCCTCGAAACCCGACAGCGGCGACCACGT-CCC-AAACCCTAGCTTAGACCTCACCGGCCGGCCG
C-CCGCAGCCATGGGCCTCTGGAATTACGGCCGCAAAGGCAGGCACGACCGCGAGGCCGTCTCCTCGTCGGGACGCCGCC
GC
>SNPs
-----------------------------------------------------------------------------S--
-----------------------------------------------------------S-------S-------S----
-------------------------S--------------------------S---------------------------
--------------SS---------SS---S-------------------------------------------------
---------SSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S---S---S-----------SS--S----
---SS------------------------S-----------S--------------------------------------
-S------S----------S----S-------------SS---------SS-----S--SS-----------S-SS-S--
---------------------------------------S----------------S-----S-S---------------
-------S-----------------------------------------------------------------------S
---------------------S------------------------------------S---------------------
----------------------------------S------S-------S-------------------SSS-SSSSSSS
SS-----------------------------------------------------------------------S----SS
-SSS-SSSSSSSSSSSSSSSSS----------------------------------------S-----------------
----S-SS------------------------------------------------------------------------
------------------------------------------------S----------------S--------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
-S--------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
-------------------S------------------------------------------SS---S------------
--------------------------------S-----------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------S----S--------------------------------------------S---------------
--------------------------------S---SS------S-----------------------------------
-----------S--------------S------S----------------------------------------------
---------------SSSSS------S-S----------------------S-----S--------S--------S----
------------------------------------------S-------------------------------------
------S-----S---------------S-----------------------S-SSSS-SSSSS---S----------S-
--------------S----S------------------------------------------------------------
-----------------S---------------------------------------------S----------------
-----------------------------------------------------------S--------------------
----------------------------------S-S-------------S------------------------S----
-S-----------S------------------------------------------------------------------
------S----------------------S-----------------------SSSSSS---------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
----------------------------------------------S---------------------S------S----
-S--S----------------------------------------SS--SSS----------S-----------------
----S-----------S--S-----------------------------------------------------SS-----
---------S----------------S-----------------------S--------------------S--------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
---------------------------------------------------S----------------------------
-------S-------------------------------------------------------------S----------
-S-------------------S-----------------------S----------------------------------
--
>forward_979
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------T
CCTTCCCACATACCCACCT-------------------------------------------------------------
--------------------------------------------------------------------------------
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--
>reverse_2225
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----------------------------------------------------------------GCTACTACGACATCTC
GGCC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>forward_982
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--TTCCCACATACCCACCTCCA----------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_2860
--------------------------------------------------------------------------------
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-----------------------------------------------------------CTGCTTTCCTCATGTGGCGT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>forward_2332
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------TAGGGGTT
TGTCTGCGGAAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_3515
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------TGACCC
TATCCTGTCTGGCC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
