>input_sequence_41690
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-----------------------------------------------------------------------------ATG
GTATGCCTTCGCCTCCGTCGCCCCTCACCTGGCATTTCCATGGCTGTCGAGTTCGCGCGACGGATTCGCTGTGCGGACGC
TAGTTCAGTTAGGGGAATCCGGCAAGATGTGCAGCTGCAGTTTGTGATCTAAGGCGTTCTGCCAT---TTTTATGGAACT
TTTGCAGTATCATTCAGTGCTGGCGTATGATGGAACTGGCTGGCTGTAGCTCTGCGATTTAGGTGCCTAGAGAGTAGAGA
CTGGAACTGTAACCTGGTGCTTTGATTTTTTAACAGCTGAACGTATTCGAGAAAAAGAACAGCTGAACTGGTAGAGAGAT
TTCAAGTTCGATCTGGATGAAGGGTTTCTGTGTTTTGTAGGTGATGATCTTAGTGGCGAACTGTTTGCCTGTGT--TCCA
AATGATTTGGGGCGCTCATATTGGCAGGGGTTAAATCTGGTT-TTCGTTCACAAACATTCCCAAGAGCCACAGTCTTTTA
CTAATTCATTTATACACACTTGCCGTTCACACTTAGATGATTACTGAA--------GAGGCTAAGATTTAACTTAAACTC
ATTTGACATTCCTTTTGTTTACTTGCTGAGAAGAATACTGCATTGGTAGATTTTGAAAGAATT-----------------
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-------------------CTCAGTATGCTGCTCTGATTAGTTACATATTGTCTGCTCATACGCATTTCCACTCTAGTTT
TTGTTGTCATCATGCTACAACATGACAAGTTTTGGCATGAAATTAGTTACACTCAACTTGGGATATAGTAGTGTAAGTGA
ATACAATTTTGCAGTTAATACCTTTTCCATTTAGTTGATGTGAGTTCTGCATTTGGCAGGTTGTAGAAACAATTCTTAGT
ATGCTCCGTTGATTAGTTACATTACATGTTCAACTTTCTGTTATGCAGTTTCCACTTAGTTTTAGCTGTCATTGTGCAAC
TGCATGACAGGTT-ATTGCACGCAATTTGTTATACCCAACTTGGAATGTTGCTACTGTGACAGTGAAATTTAATTCAATG
TTGTTATGCAATTATGTCAAGTATGTACTCAGCTAAATCTGATTTGCCTTGCTAGTCGAAGAGGAAAACCAGGGAGCCTA
AGGAGGAGAATGTTACTCTTGGACCTGCTGTCCGTGAAGGGGAGCATGTCTTCGGAGTTGCTCATGTCTTTGCATCATTC
AATGACACATTCATCGTATGTACTGGTTTGCCTATTACATGCTTTATTATGGTTGTCACCGTCATGTGCTGTTCGGTTTC
TTACTGGTGTTAGCCTCCATCTGCAGCACGTCACTGACTTGTCCGGGAGAGAGACCCTTGTTCGTATCACTGGTATGCTC
CATACTTAAATTTTCTTTTCGTGATCTAGCTATATTTTTTATGGTTTAAAAGTAAATTTGATTGTCCCATAATCAATGCA
GGTGGAATGAAGGTCAAGGCTGATCGTGACGAGTCATCACCATATGCAGCTATGCTTGCTTCTCAAGATGTGGCGACACG
TTGCAAGGTTTGTATGGGCTTTCATTGGACTATTTTCTGTTCAGGTGCCTACATCCAGGATTCTTATATGTTTTCCACTC
GCGCTTCCAGGAGCTCGGCATCACTGCTTTGCACATTAAGCTCCGTGCCACTGGAGGCAACAAGACCAAGACTCCTGGAC
CTGGTGCTCAATCCGCTCTCAGGGCACTCGCTCGTTCTGGCATGAAAATTGGACGCATTGGTAAATTCTGACTTCCCGCC
GCATATATGCAAATGAAGAACACATATCTTGTTAC-------------------------------TTTGCTGTTTCATT
GTGGTCTCGTCCTTATTGGGCATAGAACTAATAATTGTATGTCTGATTCTCTTTGCAGAGGACGTGACCCCCGTTCCCAC
TGACAGCACCCGCAGAAAGGGTGGTAGGAGAGGAAGGAGGCTGTAG----------------------------------
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>chr6A_1_TraesCS6A01G137300
CCTGCAACATCATGAGTTCTGCGCAAGTTCAGTTGAAGACACAATGTTGCAAGCCGCAGAAGATATATGCCATTACCATC
ATTTTGAAGACACAATGTTTCCAGAGATATTTCACCTCTTTTCC--ATAATTAATCCGTGTTTATGAAAAAAATGATGGA
AGGATGGACCTGATACACAAAATGGGACATTATTTTGCAAGTGCTGAACTAACCAAACCTTATGAATACACTACGAAGCA
ACTTTTGCAAATATAGAGCCAAAAATGGTACAAATAATACACTGACCAACCATCTGACTAAATACTTCATGAAAGTTCTT
TGAAAATTGACATTTGGAATTTGGATAGTATAGTTTAAAGAGAAGCAACATCTACCATTAACATGAGAATTTACACATTC
TTTTCCAAA-------AAAAATAAGACCATGTATATTGTGCCCTGCACACAAAAACAAATCGTGCAACGTGCATACT---
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--------------------------------------------ACAGCAAGTTTTCACATGAACAAATTTTTAGTGCAT
GATTACATGATAGAAACACAAGTGTGGTAAACTTAATGCAAGCCTCATATGCACGGGCGTACGTACATGTGTCGACATCT
CCTTCACAACTCGATGCACACATGATAGATTGTAACCCTTTGGGGGTT-AAAAATAGGCCAAAATATGAATTACTTGTTG
AATAAGAGATAAATTACCATTTTCAGTGTACCTT----------------------------------------------
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---------CATGAGGTGTGAGCCCAACCGTACTAATAAATGAGCCCAACCGTACTAATAAATGAGCCCATTTGCTGCCT
TTTTTT-T-CTGGCCTGGGCGGCCATCTAGGCCCATGCGATCACCGGTCCCACTTGCAGACACTGCTTCAGCCTCCGCAT
TAAACCCTAG---TACCCGGCATCCGCCGCCGTCGCATATAACCTCTCCCGCTAATACCTTTCTCACACTTAACGAAACT
CCGGCGGCGGCGGCGGCGAGCTCGCGACCTGAAGCACAAGGAGAAGGCGCCTCGATCCCTCGTCGCCTCGGTCCACCATG
GTATGCCTTCGCCTCCGTCGCCCCTCACCTGGCATTTCCATGGCTGTCGAGTTCGCGCGACGGATTCGCTGTGCGGACGC
TAGTTCAGTTAGGGGAATCCGGCAAGATGTGCAGCTGCAGTTTGTGATCTAAGGCGTTCTGCCAT---TTTTATGGAACT
TTTGCAGTATCATTCAGTGCTGGCGTATGATGGAACTGGCTGGCTGTAGCTCTGCGATTTAGGTGCCTAGAGAGTAGAGA
CTGGAACTGTAACCTGGTGCTTTGATTTTTTAACAGCTGAACGTATTCGAGAAAAAGAACAGCTGAACTGGTAGAGAGAT
TTCAAGTTCGATCTGGATGAAGGGTTTCTGTGTTTTGTAGGTGATGATCTTAGTGGCGAACTGTTTGCCTGTGT--TCCA
AATGATTTGGGGCGCTCATATTGGCAGGGGTTAAATCTGGTT-TTCGTTCACAAACATTCCCAAGAGCCACAGTCTTTTA
CTAATTCATTTATACACACTTGCCGTTCACACTTAGATGATTACTGAA--------GAGGCTAAGATTTAACTTAAACTC
ATTTGACATTCCTTTTGTTTACTTGCTGAGAAGAATACTGCATTGGTAGATTTTGAAAGAATT-----------------
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-------------------CTCAGTATGCTGCTCTGATTAGTTACATATTGTCTGCTCATACGCATTTCCACTCTAGTTT
TTGTTGTCATCATGCTACAACATGACAAGTTTTGGCATGAAATTAGTTACACTCAACTTGGGATATAGTAGTGTAAGTGA
ATACAATTTTGCAGTTAATACCTTTTCCATTTAGTTGATGTGAGTTCTGCATTTGGCAGGTTGTAGAAACAATTCTTAGT
ATGCTCCGTTGATTAGTTACATTACATGTTCAACTTTCTGTTATGCAGTTTCCACTTAGTTTTAGCTGTCATTGTGCAAC
TGCATGACAGGTT-ATTGCACGCAATTTGTTATACCCAACTTGGAATGTTGCTACTGTGACAGTGAAATTTAATTCAATG
TTGTTATGCAATTATGTCAAGTATGTACTCAGCTAAATCTGATTTGCCTTGCTAGTCGAAGAGGAAAACCAGGGAGCCTA
AGGAGGAGAATGTTACTCTTGGACCTGCTGTCCGTGAAGGGGAGCATGTCTTCGGAGTTGCTCATGTCTTTGCATCATTC
AATGACACATTCATCGTATGTACTGGTTTGCCTATTACATGCTTTATTATGGTTGTCACCGTCATGTGCTGTTCGGTTTC
TTACTGGTGTTAGCCTCCATCTGCAGCACGTCACTGACTTGTCCGGGAGAGAGACCCTTGTTCGTATCACTGGTATGCTC
CATACTTAAATTTTCTTTTCGTGATCTAGCTATATTTTTTATGGTTTAAAAGTAAATTTGATTGTCCCATAATCAATGCA
GGTGGAATGAAGGTCAAGGCTGATCGTGACGAGTCATCACCATATGCAGCTATGCTTGCTTCTCAAGATGTGGCGACACG
TTGCAAGGTTTGTATGGGCTTTCATTGGACTATTTTCTGTTCAGGTGCCTACATCCAGGATTCTTATATGTTTTCCACTC
GCGCTTCCAGGAGCTCGGCATCACTGCTTTGCACATTAAGCTCCGTGCCACTGGAGGCAACAAGACCAAGACTCCTGGAC
CTGGTGCTCAATCCGCTCTCAGGGCACTCGCTCGTTCTGGCATGAAAATTGGACGCATTGGTAAATTCTGACTTCCCGCC
GCATATATGCAAATGAAGAACACATATCTTGTTAC-------------------------------TTTGCTGTTTCATT
GTGGTCTCGTCCTTATTGGGCATAGAACTAATAATTGTATGTCTGATTCTCTTTGCAGAGGACGTGACCCCCGTTCCCAC
TGACAGCACCCGCAGAAAGGGTGGTAGGAGAGGAAGGAGGCTGTAGACGCCTTCTTTTTCATCGTCTCTCATGGCCGTGA
TCGAGAATTCGGTGTTCGAATAGCC---TTATAGATCCTATGTAGTTGCCGATCAGTTTACTCCAAGTTCGGATTTGTTT
ACTGTCAGT---TTCAGAGCTGTGCTTCGCTTCAGACCATCTCTGATCGTGTATTTATGCAAAAAATATTCTAGTCCGAA
CATGCC-TTATTATGGTTTCTGATAATATGGTTGGCTCTTATTAGTAATA------------------------------
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-TATCTGATAATATGTTGTGCTGGAATGCCAATGCTGAGTGCTATCTCATTCAGGAACCATCATATTGCATTTGTCATTG
ACCATAACGGAAAAGAATCTGAGCAGAGAGACACATTGCCCTCTGAAAAGGAGCAAATAGTTTCCCGGCTTTGAAAAGGA
GCAGTGAAAGATAGGTTTGGAAAGCAGTACTAGAAAGCAAGCATGGCGTATCCAAACAATGCCGCGAACGAGCCGGCGAG
GCCTGCCACCGTGAGGCCGGCGCCGCTGGCGGCTCCAGGAGGCGCGTCCTTGGCCGGCGTTGAGTTACCCGCC-------
--GGAGCATTTGGGGCTGCTGGGGAGTTTGGCGGGGCGCCACCTGAGGGAGAAGACGGCGGGGTCGTTGCTGTTGCTGCG
GGTGACCCCTGGCTGGGCGTGGGAGCGCCCTTGGCGGCGGCGGCGACCATGACGATGAGCTTCTCGTTGGCGCGGCAGTT
GGCGTCGACGCCGCTGATGAAGAAGAAGGCGCCGGCGCGGTCGAGGTCGAAGACGGTGTTGCCGTCGGTGAACTGCTTGT
CGTACGTGTTGGTGTTGCAAGCGTTGTAGTCGGCCGGCGCCACCAGCAGCACCGAGTCCTTGTCCTTGGGGTACACGAAC
ACTGCACACGCA--ACGCATGCATGCATGAATCACACACACACACACACATCAAAATCACGTCGCCGAGATGCAAAATGA
AAGGTGGTCGTGCG-----------------------GTTACGTACCGAGCTGGTCGCCGACCTGGAAGGTGGTCTTC
>chr6D_1
CCTGCAACATTATGAGTTGTGCGCAAGTTTAGTTGAGGACACAATGTTGCAAGCCGCAGAAGATATATTCCATTAGCATT
ATTTTGAAGACACAATGTTTCCAGAGATATTTCACCTCTTTTCC--GTAATTAATCCGTGTTTATGAAAAAAATGATGGA
AGGATGGACCTGATACACAAAATTGGACATTATTTCGCAAGCGTTGAGCTAACCAAACC---------------------
----------------AGCCAAAAATGGTACAGATAAGACACTGACCAACCATCTGACTAAATACCTCATGAAGGTTCTT
TGAAAATTGAAATTTGGAATTTGGATAGTATAATTTAAATAGAAGAACCATCTACCATTAACATGAGAATTTACACATTC
TTTTCCAAA-------AAAA-TAAGACCATGTATATTGTGCCCTGCACACAAAAACAAATCG------------------
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---------------------------------------TGCATACTACAAGTTTTCACATGAATGGAGTTCTA---CAT
GATTACATGATAGAAACACAAGTGCGGTAAACTTAATGCAAGCCTCGTATGCACGGGCGTACGT-----------CATCT
TATTCACAGCTCGATGCACACATTATAAATTGTCACCATGTGGGGGTTAAAAAATAGGCCAAAATATGAATTACTTGTAG
AATAAGAGATAAATTGCCGTGTTCAATGTACAAAATTTTAGATCTTAAGTTTATGTAAAAAAATCTGGATAAGTATATGT
AATTTTTTTGCCGATTTTTTTATTAACAGTAAATGATAATTCTGTAATTCCGAAACTGTTAAAGGGCCCGTGAAAATTGT
AAAAATAAGAAGGACGCCATGAATAACAGCGTTCATGGTGGACTCTGTTGCTAACAGCGTACACGTCTGGACGCTAATAT
GGACGGCGTCCAGTCATGCCATTCCATTGGTGCTCCGATTAGGCTCAATCGAGTCGTTTTGCACTTATAGATAGAGGTTT
CATGACTTAAAAACCTAATACACATGTAGTGGTCGCTCCTTACCTCGCAGGGTTGTAAGCAAGCTCTAGCACGGGCATCA
CCAATCATCACAGGAGCAACATCGTCTCATTGGCCGCTCGTCATTAGGATCATTCACTCGTCATTAGGATCATCCACTCG
AGCTATGGATGGCGCATGTGAGTTGTTCCAAGTACTCGTTGAATCTTCTTTGTTTGCTATTATGTATAATTTATTCAGTG
GTTACAAGGGTACATTGTATAGATGACTTGGTTGTTACTCTTGAGTAATATAATTGGTAATTGGCTAGTTTATGAGAATA
GATAAGTCGACCTTGAGTCAGCGTCCGCGCTTTTGCCTCTACATGCTTGTGCACCGCTGCCAGTACTTCTGGGAGCATGG
TGTGCCGGCGTCGTAGCTCAATGTGAACCTCCTGTACGGGTGGCACCTCAACCTCGATAGGGTTCCGGTGTCGGCCCTGC
TGGCCTCAGGCCACGCGTAGCTGATGAAGATCCACCGCACTCGTGCTCTACTACCGCCGACCTTCACCGCGACCCAACGT
ACGCGGTGGATTTGCCACCGAGAATGACCAGCGTTGTCGGTAGTGCTTCGAGTGTGCGTTCGATGCACCGCGCTCACTCG
CCGCTCAACGCCACCACTGTAGTCGTGGCAGGCGGAGCAGCAGCTGGCAACCTTCCAGCAGGCATTTGGATGGTGGCGCC
AATCTACGTCAATCTGACCAAGGAGGAGGACAACGACGACCCTGCCTAGATCTACCACCCGCAGCTAACTGTTTTTATAG
TTTTCATTTATTTTTAGATTTAATTAATATAAATAGGACTTTTGTTGGTTGTTTTATTTTTTAGAATTTCCAAAAGCTAG
CGCAAATGTGCAATGCTTCCGACCGTTTTGGACGCACCTACGAACCGGCAGACAAAAACGAACACTGGCGTCCACCCAAA
TGGACAAAGAACGAAGCAAATCTGCGTCAGGCCAAGTTCAACACATGGGACGCTGCTAACAATAGCGTCCAGGTGTGGAC
GTGGATCATAACAGCGACCAGGCCTGGACGCTACTAATCATTGCGTTCTTCCTATTTTTCAAAATACCAACTTATGGTTA
CTAGTTTCGGAATTACAGAATTACTATTTATTACGTAAAAAACTCTCACATTTTTTTGACAATGTAAGCATATGTAAACA
AATCAGGATAAGTCTTGTTTTTAGGCAATAT---TAATTCACTAAAAAGGGACTAATGGATTAGACGTGCTGATGGGCCC
ATATGAAGGCATGAGGTGTGAGCCCAACCGTACTAATAAATGAGCCCA----------------------TTTGCTGCCT
CCTTTTTCCCTGGCCCGGCCGGCCATCTAGGCCCGTGCTATAACCGGTCCCACTTGCAGACACTGCTTCAGCCTCCGTAT
TAAACCCTAGTACTACCCGTCATCCGCCGCCGTCGCATATAACCTCTCCCGCTAATTCCTTTATCTCTCTTCACGAATTT
CCGGCGG---CGGCGGCGAGCTCGCGACCTGAAGCAGAAGGAGAAGACGCGTCGATCCCTCGTTGCCTCGCCCCACCATG
GTATGCCTTCTCCTCCGTCTCCCCTCACCTGGCATTTCCATGGCTGTCGAGTTAGCGGGACGGATTCGCTGTGCGGACGC
TAGTTCAGTGGGGGAAATCCTGCGTGATGTGCTGCTGCTGTTTGTGATCTAAGTCGTTCTGCTAT---TTGTATGGAACT
GCTGCGGTATCATTCGGTGCTGGCGTCTGATGGA--------GCTGTAGCTCTGCGATCTACAGTAGGTGCC--TAGAGA
TTGGAACTGTAACCTGGTGCTTTGATTTTT---------------------------AACAGCTGAACTGGTAGAGAAAT
TTCAAGTTAGTAGTGGACGAACGTTTACTGTGGGTTGTAGGTGATGATCTTGGTGGTGAACTGTCTGTGTGTGTGTTTCA
AAAGATTTGGGGAGCTCATATTGGTTGGGGTTAAATCTGGTTTTTCGTTCACAAACATTCCCAAGAGCCGCAGTCTTTTA
CTA----ATTTATACACACTTGCCGTTCACACTTAGATGATTACGGAA--------GAGGCTAAGATTTAACTTAAGCTC
ATTTGA---TCCTTTTGTTTACTTGCTGAGAA---TACTGCATTGGCAGATTTTGGAAGAATT-----------------
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-------------------CTCAGTATGCTGCTTTGATTAGTTACATAGTGTCTGCCCATACGCATTTCCACTCTAGTTT
TAGTTGTCATCACACAGCCACATGACAAGTTTTTGCATTAAATTAGTTACACTCAACTTGGAATATAGTAGTGTAAGTGA
ATACAATTTTGCAGTTAATACCTTTTCTATTTAATTGATGAGAGTTCTGCATTTGGCAGGGTGTAGGTTCAATTCGTAGT
ATGCTTCGTTGATTAGTTACAG-----GTTCAAGTTTCTGTTATACAGTTTCCACTTAGTTTTAGTTGTCATTGCGCAGT
TGCATGACAGGTTTATTGCACGAAATTTGTTATACCCAACATAGAATGTTGCTACTG-------GAAATTTAATTGAATG
CTGTTGTGCAATTATGTCAAGTATGTACTCAGCTAAATCTGATTTGCCTTGCTAGTCGAAGAGGAAAACCAGGGAGCCTA
AGGAGGAGAATGTTACTCTTGGACCTGCTGTCCGTGAAGGGGAGCATGTCTTCGGAGTTGCTCATGTCTTTGCATCATTC
AATGACACATTCATCGTATGTACTGGTTTGCCTATTACATGCTTTATTATGGTCGTCACGGTCATGTGCTGCTCGGTTTC
TTACTGGTGTTAGCCTCCATCTGCAGCACGTCACTGACTTGTCTGGGAGAGAGACCCTTGTTCGTATTACTGGTATGCTC
TGTACTTAAATTTTCTTTTAGTGGTTGAGCTATA-TTTTTATGTTTTAAAAATAAATCTGATTGGCCCCTAATTAATGCA
GGTGGAATGAAGGTCAAGGCTGATCGTGATGAGTCATCACCATATGCAGCTATGCTCGCTTCTCAAGATGTTGCGACGCG
TTGCAAGGTTTGTATGGGCTTTCATTGGACTATTTTCTGTTTGGGTGCCTA----CAGGATTCTGATATATTTTGTGCTT
GCGCTTCCAGGAACTTGGCATCACTGCTTTGCACATTAAGCTCCGTGCCACTGGAGGCAACAAGACCAAGACTCCTGGAC
CTGGTGCTCAATCCGCTCTCAGGGCACTCGCTCGTTCTGGCATGAAAATTGGACGCATTGGTAAATTCTGGCAT-CCGCT
GCATATATGCAAATGAAGAATACATATCTTGTTACCCCCCTTCATGGACAGCGGGTCCAAGAGTACTTTGTTGTTTCATT
GTGGTGTCACCCTTATTGGGCATAGAACTAATGATGGTATGTCTCATTCTCTTTGCAGAGGACGTGACCCCTGTTCCCAC
TGACAGCACTCGCAGAAAGGGCGGCAGGAGAGGAAGGAGGCTGTAGACACCTTCTTTTTCATCGTCTCTCATGGTCGTCA
TCAAGAATTTGCAGTTTGAGTAGCCTTATTATAGATCCTATGTAGTCGCCCGTCAGTTTACTCTGAGTTCAGAATATTTG
ACTGTCGCTTAATTCAGAGCTGTGCTTCACTTCAGATCATCTCTGGTCGTGTATTTATGCCAAAGTAT---TAGTCCGCA
CATGCCTTTATTATGGTTTCTGATAAGTAATA------------------------------------------------
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---------------C--TGCTGGAATGCCAACG---------ATCTCATTCAGGAACCATCATATTGCATTTGTCATTG
ATCATAACGGAAAAGAATCTGAGCAGAGAGACGCATTGCCTTCTGAAAAGGAGCAAATAGTCTCCCGGCTTTGAAAAGGA
GCAGTGAAAGATAGCTTTGGAAAGCAGTACTAGAAAGCAAGCATGGCGTATCCAAACAATGCCACGAACGAGCCGGCGAG
GCCTGCCACCGTGAGACCGGCGCCGCTGGCGGCTCCAGGAGGCGCGTCCTTGGCCGGCGTTGAGTTACCCGCC-------
--GGAGCATTTGGGGCTGCTGGGGAGTTTGGCGGCGCGCCACCCGAGGGAGAAGACGGCGGGGTCGTTGCTGTTGCTGCA
GGCGACCCTTGGCTGGGCGTGGGAGCGCCCTTGGCGGCGGCGGCGACCATGACGATGAGCTTCTCGTTGGCGCGGCAGTT
GGCGTCGACGCCGCTGATGAAGAAGAAGGCGCCGGCGCGGTCGAGGTCGAAGACGGTGTTGCCGTCGGTGAACTGCTTGT
CGTAGGTGTTGGTGTTGCAGGCGTTGTAGTCGGCCGGCGCCACCAGCAGCACCGAGTCCTTGTCCTTGGGGTACACGAAC
ACTGCACGCGACGCATGCATGCATGAACC----------ACACACGCACATCAAAATCACGTCGCCGAAGTTCAAATGAA
ATGCAAACTTGGATCGATCGTCCAGGTCGGTCGTGCAGTTACGTACCGAGCTGGTCGCCGACCTGGAAGGTGGTCTTC
>chr6B_3
--TGCAACATCATGAGTTGTGCGCAAATTCAGTTGAAGACACAATGTTGCAAGCCGTGGAAGATATATGCCATTAGCATT
ATTTTGAAGACACAATGTTTCCAGAGATATTTCACATCTTTTCCATATACTTAATCCGTGTTTATGAAAAAGATGATGGA
AGGATGGACCTGATACACAAAATGGGACATTGTTGTGCAAGTGTTGAACTAACCAAACATTATGAATACACTACGAAGCA
ACTTTTGCAAATATAGAGCCAAAACTGGTACAGATAAGACATTGACCAGCCATGTGACTAAATACCTCATGAAGGTTCTT
TGAAA-TTGACATTTGGAATTTGGATAGCATAACTTAAAGAGAAGCAGCATCTACCATTAAAATGAGAATGGACACATTC
TTTTCCAAAATAAAATAAAA-TAAGACCATGTATATTGTGCCCTGCACACAAAAACAAATCGTGCATGATTACATGAACG
GAATTTTACATGATTACATGACAGAAACACAACAAGTTTCATATGCATGATTACACAAACGAATTTTTACATGGTTACAT
GGTAGAAACACAAAAAATAAGACCATGTATATTGTGCCATGCACACAACAAGTTTCCACATGAACGAATTTTTA---CAT
GATTACATGATAGAAACACAAGTGCGGTAAACTTAATGCAAGCCTCATATGCACGGGCGTACATACATGTGTCCACATCT
TCTTCACAGCTCGATGCGCACATGATAAATTGTAACCCTGTGGGGGTTAAAAAATAGGCCAAAATATGAATTACTTGTAG
AATAAGAGATAAATTGCCGTGTTCAACGTACAAATTTTGAGATCTTAAGTTTATGTAAAT-AATCAGGATAAGTATATGT
AATTTTTTTTGGAAATATAAGT----------------------------------------------------------
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---------------------------------------------------------------------ATGTGTAAAAA
AATCAGGACAAGTCTTGTTTGTAGGCAACAATAATAATTCACTGAAGAGGGACTGATGGATCAGTCGTGCTGACGGGCCC
ATATGAAGGCATGAGGTGTGAGCCCAACCGTACTAATAAA--------------------AATGAGCCCATTTGCTGCCT
CTTTTTTT-CTGGCCTGGGCGGCTATCTAGGCCCATGCGATCACCGGTCCCACTTGCAGACACTGCTTCAGCCTCCGCAT
TAAACCCTAG---TACCCGTCATCCGCCGCCGTCGCATATAACCTCTCCCGGTAATACCTTTCTCACTCTTAACGAAACT
CCGGCGG---CGGCGGCGA-CTCGCGACCTGAAGCACAAGGAGAAGGCGCCTCGATCCCTCGTCGCCTCGCGCCACCATG
CTATGCCTTCGTCTCCGTCTCCCTTCAGCTGGCATTTACATGGCTGTCGAGTTCGCGCGACGGATTCGCTGTGCGGACGC
TTGTTCAGTGGGGTGAATCCGGCAAGATGTGCAGCTGCATCTTGTGATCTAAGGCGTTCCTTCTGCTATTGTATGGAACT
TTTGCAGTATCATTCGGTGCTGGCTTATGATGAA--------ACTGTAGCTCTGCGATTTAGGTGCCTAT-------AGA
TTGGAACTGTAACCTGGTGCTTTGATTTTT---------------------------AACAGCTGAACTGGTAGAGAAAT
TTCAAGTTAGTAATGGACGAACGGTTACTGTGGTTTGCAGGTGATGATCTTGGTGGTGAACTGTTTGTGTGTGT--TTCA
AATGATTTGGGTTGCTCATTTTGGGAGGGGATAAATCTGGTTTTT-GTTCACAAATATTCCCAAGAGCTGCAGTTTTT--
--A----ATTTAAACGCACTTGCAATTCACACTTAGATGATACAGAGAAACAGAAGGAGGCTAAGATTTAACTTAAACTC
ATTTGACATTCTTTTTGTTTAATTGCTGAGAA---TACTGCATTGGCAGATTTTGGAAGATTTCTCAGGCTCTGTTTGGT
TGAGCTGCAGATTCTAAAAAAGCTGCTGTAGAAAAGCTGCTGTGAAAATGCTGCTGTGGAAAAGCTGGAGGCTGTTTGGT
AAAACAGCTGTGAAATTGTAGATTTGGCTGTGAATTGTCTATATTGCCCATGGGGCCTGAGTTCATATATTTATGTACTT
ATTGACCGTAGGGCAGTGATATGTACATTTGTAGGTAACTGAACGATCATTTTTCAAAGAAAAATTATGACAATGTAGGC
GATTCATAGCTAATGCATAGGCAATACAACGACTGTACTTTGATGTTGCATACATTTAAATAGATATTAATCCCGTAATA
TTATTACAAAACACATGCACCATAGAAAACACATATGGTTCACATGGTGTTGACCTCCATCGACATAGCTAAACATCGAG
ATATGCTACAATACTATCAAAATTTCTTCCACTTTACATCAATATACCACGATATGACAAGCAATATGCAGCAACATATC
AAAATGTCATCCACTTTACATGAATATACAACAATATGACAAGCTACATGCATCAATATATCAAAAATCATCCATTGTTC
ATCACTTCACATGAATTCACTCACTACCAACAGAGCAAAAAAAACCTACTTGGTACAGGACATGGGAAGGGGACAAGGGC
AGTGGGAGGAAAGGGGTGCAGCTACATGGCAGAACGGATGGAGGAGGTCGCGGCAGGGCTGCGGGAGGCGGCGCCGGCGG
CGGGGCGCGCGCGGTGGAGGGACGGCGGCCCTTGCTGCTCCGGTGGCGCAGGCCGGTAGTTGAGGAAGGAGGAGGCCACG
CCGAGTAGTGGAGAACGGAGGTCTCCGCGGGGAGGCGGACGGTGGACGCGGGAGGCAGCGCCGGTGGCTGGGCGCGCGGC
GGCGGATGGGCGGCGCCGGCGGCAGCGGCTAGGAACCCTAGCTGTCGCTCGGGTCAATGTGAAACGAGCAGGGGTTTTTT
CTCTTGTGGTGGATGCCTCGCTCGGGAAGAATAGGATCCAATCGTTTTTCACTTGCCAGTGGCAAACGTGGGTAAATACT
ATGAAACTTTCAGGGGACAGCTAAAACTGCACCGCTGAAGTTGGGGGTTCACCCGCTGCGAAAATTACACTGCGGGGAAG
CTGTAGATTTTGCAACTTCTGCTTCTCATTTTACCCCTTTGGTTAGATTGTAGCTTTGAAAAGCCAGAAGCTGGTTCCAA
AAGTCCAACCAAACACGGCCTCAGTATGCTGCTTTGATTAGTTACATA--------------------------------
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-------------------------------------------------------------------------------G
TTGTTGTGCAATTATGTCAAGTATGTGCTAAGCTAAATCTGATTTGCCTTGCTAGTCGAAGAGGAAAACCAGGGAGCCTA
AGGAGGAGAATGTTACTCTTGGACCTGCTGTCCGTGAAGGGGAGCATGTCTTCGGAGTTGCTCATGTCTTTGCATCATTC
AATGACACATTCATCGTATGTACTGGTTTGCCTATTACATGCTTTATTATGGTCGTCACCGTCATGTGCTGTTCGGTTTC
TTACTGGTGTTAGCCTCCGTCTGCAGCACGTCACTGACTTGTCTGGGAGAGAGACCCTTGTTCGTATTACTGGTATGCTC
TG----TACCTTTTCTTTTAGTGGTTGAGCTATA-TTTT-ATGGTTTAAAAATAAATCTGATTGTCCCCTAATCAATGCA
GGTGGAATGAAGGTCAAGGCTGATCGTGATGAGTCATCACCATATGCAGCTATGCTCGCTTCTCAAGATGTTGCGACGCG
TTGCAAGGTTTGTATGGGCTTTCATTGGACTATTTTCTGTTTGGGTGCCTT----CAGGATTCTGATATA---TGTGCTT
GCGCTTCCAGGAACTTGGCATCACTGCTTTGCACATTAAGCTCCGTGCCACTGGAGGCAACAAGACCAAGACTCCTGGAC
CTGGTGCTCAATCCGCTCTCAGGGCACTCGCTCGTTCTGGCATGAAAATTGGACGCATTGGTAAATTCTGGCAT-CCGCT
GCATATATGCAAATGAAGAATACATATCTTGTTACCCCCCTTCATGGACAGCGGGTCCAAGTGTACTTTGCTGTTTCATT
GTGGTGTCACCCTTATTGGGCATAGAACTAATGATGGTATGTCTCATTCTCTTTGCAGAGGACGTGACCCCTGTTCCCAC
TGACAGCACTCGCAGAAAGGGCGGCAGGAGAGGAAGGAGGCTGTAGACGCCTTCTTTTTCATCGTCTCTCATGGTCGTCA
TCAAGAATTTGTAGTTTGAATAGCCTTATTATAGATCCTATGTAGTCGCCCGTCAGTTTACTCCGAGTTCAGAATATTTG
ACTGTCGCTTAATTCAGAGCTGTGCTTCGCTTCAGAACATCTCTGGTCGTGTATTTATGCGAAAGTAT---TAGTCCGCG
CATGCCTTTATTATGCTTTCTGATAAGTAATACTCCCTGTCCGGAAATACTTGTCGAAGAAATGGATGTACTCTCTTCGT
CCGGAAATACTTGTCATCAAAATGGATAAAAGAAGATGTGTTATCCATTTTTCCGACAAGTATTTCCTTATGGAGGGAGT
CTATCTGATAATATGC--TGCTGGAATGCCAATGCTAGGTGCTATCTCATTCAGGAACCATCATATTGCATTTGTCATTG
ATCATAACGGAAAAGAATCTGAGCAGAGACACG--TTGCCCTCTGAAAAGGAGCAAATAGTCTTCCGGCTTTGAAAAGGA
GCAGTAAAAGATAGCTTTGGAAAGCAGTACTAGAAAGCAAGCATGGCGTATCCAAACAATGCCACGAACGAGCCGGCGAG
GCCTGCCACCGTGAGACCGGCGCCGCTGGCGGCTCCAGGAGGTGCGCCCTTGGCCGGCGTTGAGTTACTCGCCTCACCCG
CCGGAGCATTTGGGGTTGCTGGGGAGTTTGGCGGGGCGCCACCTGAGGGAGCAGACGGCGGGGTCGTTGCTGTTGCTGCA
GGCGACCCCTGGCTGGGCGTGGGAGCGCCCTTGGCGGCGGCGGCGACCATGACGATGAGCTTCTCGTTGGCGCGGCAGTT
GGCGTCGACGCCGCTGATGAAGAAGAAGGCGCCGGCGCGGTCGAGGTCGAAGACGGTGTTGCCGTCGCTGAACTGCTTGT
CGTAGGTGTTGGTGTTGCAGGCGTTGTAGTCGGCCGGCGCCACCAGCAGCACCGAGTCCTTGTCCTTGGGGTACACGAAC
ACTGCACAAGCA--ATGCATGCATGAACCC--------CACACACACGCATCAAAGTCGCGTCACCGAGATGCAAATGTG
CAAGCAGCAGGAAGTC------------------------ACGTACCGAGCTGGTCGCCGACCTGGAAGGTGGTCTTC
>SNPs
------------------S--------------------------------------------------------S---S
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------S----S---------------------------S-------S------
--------------------------------S--------------S--------------------------------
--------------------S---------------------------------------------SSS-SSSSSSS---
--------------------------------------------------------------------------------
-----------------------------------------------S-----------------S--------SSS---
------------------------S------------------------------------------------S------
S-------S------------------S-----------S--------------------------------------S-
---------------S--S-S----S-----SSS----------------------------------------------
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------------------------------------------------SSSSSSSSSSSS--------------------
S-------------------------------------------------------------------------------
-------------------S-----------------------------------------------S------------
-------SSS------------------------------------------------------------SS--------
-------------------S------------------------------------------------------------
---------SS-----------------------------------------------------------S---------
---------------S------------------SSSSSSSS----------------------------SSSS------
S-----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S--
--------S-SSS----S---S----S-----S------------------S----S----------SS--------S--
------------S-----------S--------------------------------------------S----------
---SSSS-------------------------------------S-----------------------------------
--------------------------------SSS-----------S--------S------------------------
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---------------------------------S--------------S-------S-----------------------
-S----------SS-SS-S--------------S----S----------------------S------------------
---------------------------S-----S------S-------------------S-----SSS------S----
-----S---------------SSSSSS------S----------S--------------------S--------S---SS
----------------------S-----------------S-S--------------SSSSSSS-----------S----
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
-------------------------------------------S-----------------------S------------
SS-----------------S---S-SS-------S----------------S-----S----------S-----------
-----------------------------S--------------------------S--------------S-----S--
-----------------------------------------SS--------SSSS---------S----S----SSS--S
------------S--S----------------------------------------------------------------
----------------------------------------------------------------------S-S-S----S
--------------------S-----------------------------------------------------------
-----S--SS----------------------S--S--------S--------------------------S--------
---------S-----------S--S-------------------------------------------------S---S-
--S------S-SS---S-----------------------------S---SS------------S-----S--S-SS--S
------SS----------------------------S--------S--------------S---SSSSSSS-------S-
--------------------------SSSSSSSSS-SSS-SSSSSS-SSS------------------------------
--------------------------------------------------------------------------------
---------------SSS------------------SS------------------------------------------
-S------------------------------S----------------------------S------------------
--------------S------------------------------------------------S----------------
---------------S----------------------------------------------------------------
-------------------------------------------------------------------------------S
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S--------------S------------------------------------------------------------
---------------S---------S-SSSSSSSSSSS--------------------------------------SSS-
----SS-SS-S-S-----------------------------------------------------------------
>forward_2481
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-------------------------------------------------------------ATGAGCCCATTTGCTGCCT
T-------------------------------------------------------------------------------
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>reverse_5174
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-----------------------------------------------------TGTCACCGTCATGTGCTGTT-------
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>forward_2921
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---------------------GGCGTATGATGGAACTGGCT---------------------------------------
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>reverse_5862
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---------------------TGGTAGGAGAGGAAGGAGGC---------------------------------------
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>forward_5390
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----------AGGTCAAGGCTGATCGTGAC--------------------------------------------------
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>reverse_6959
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------------------------------------------------------------------------------GA
AAGGTGGTCGTGCGGTTA------------------------------------------------------------
