>input_sequence_41657
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-----------------------------------CTACAAAACCCTAGCAAAATATCCCCATTCGATCGAGCCCCTTCC
TCCCCCCGCCCCCGCCC-CCACCCCCACCCCCGCCGATTCGATTCGATTCGATTCAAGCCGCCCCGCGCAAGATGATGCC
GGGGTCAGCCCCGCCGGCAGCCGGGAGCGGCATGTTCGTGCCGACGCAGACGGCGGGCACGGTGCTCTGCTGCATCTGCG
GCGTCTCCATGCAGCCCAACCCGGCCAACATGTGCGCCCGCTGCCTCCGGGCGCGCGTCGACATCACCGAGGGCGTCCCG
CGCAACGCCGCCGTCGTCTACTGCCCCGACTGCTTCTCCTACCTCCAGCCGCCGCGCTCCTGGCTCCGCGCCGGCCCGGA
GTCCCCCG-----------------------------AGCTCCTGCAGATCCTCCTCCGCCGCCTCAAGCACCCGCTCGC
CCGCCTCAAGGTCTCGCTCTCCGGCGCCGAGTTCGTCTTCTCCGAGCCCCACTCCAAGCGCCTCCGCCTCAAGCTCCGCC
TCCGCCGCGAGGTCCTCAACGGCATCGTCCTCGAGCAGACCCACTCCGTCGAGTTCGTCGTCCACGACCGCCTCTGCGAC
TCCTGCGCCCGCGCCCAGGCCAACCCTGACCAGTGGGTCGCCGTCGTCCAGCTCCGCCAGCACGTCCCGCACCGCCGCAC
CTTCCTCTACCTCGAGCAGCTCCTCATCAAGCATGGCCAGGCCGCACTCGCCATCCGCGTCGCCTCGGCTCCCGGCGGCC
TCGACTTCTTCTTCGGCTCGCGCTCGCACGCTGCCCGCCTCGTCGACTTCCTTGGTACAGTCGCTCCCATCCAGACCAAC
ACAGCCAAGCAGCTCGTCTCTCATGACACAAAGAGTTTTATCTATAACTACAAGTACACTTTCTCGGTCGAGATCTGCCC
CATATGCCGTGAGGACCTGATTGCCCTCAGCCCCAAGGCGTCCCGTGATCTTGGTGGACTAGGCCCGCTCGTCCTCTGCA
CCAAGGTCACCAATGCCATTGCGCTGCTTGACCCGCTCACTCTGCGTGTGCACCATCTGGAGGAGAAGAAGTACAGGGTG
TACAACTTCAAGGCCGCTCTGACTAGCAAGCAGCTCGTGCAGTACATGGTGCTTGATATTGAGCCAGAGTCACCTGAGAT
CACCATCGATGGATCTCGGTACCAGCTGGCATATGCGCAGGTCGCCCGCATGTCTGATTTTGGGAAAAATGATACTGTGT
TTACAGTACGAACTCATCTTGGGCACCGTCTGAGCCCTGGGGATCTTGCCCTTGGGTATGATCTCTATGGCGCCAATATG
AATGATGATGATATGGACAAGGCTTTATTACGCCAGAATTTGCCTGAAGTCATTCTGGTCAAGAAGAGCTATGAGAAGAG
GCGACGCACACGCAGATGGAAGCTGAAGAGGCTGCCTGTTGAGGAAGACCTTGGGAACAAGGCCAAAGGTGAGGAAGAGC
GGAGGGAAGATGAGTATACAAATTTCCTTGATGAGTTGGAGCGTGATCCAGAAATAAGGTTTACGATAAATCTGTACAAG
AACGACGACTACAGGTCAGAAATGGCATCCACGATTGGTGACGATGTCCCTACTGTGCCAATTGAGGAGTTGATTGAGGA
CCTAACCCTTGGTGATGATGAGGA---------GGAAGA---------CGGTGCAGATGCTGGTATGGTGGAATGAGCGA
GCATGTCTACCTACACCATTGGTCATGACTGTTCATGCCCACTGCAGGTCATAGGTCTGACTGCATCTGTTTAATTCATA
TAAGTTTTGTTTTTCTTTACTGCTATAAGCTATGAATGTCGGAGGTGTTGCTTAAAAGGTCTAAATTTTGGATTTCTCTG
TTTGTTGATGTCGACATTGTTTAAAACCATATCTCGTATCTTGGTGTAACA-----------------------------
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>chr1B_1_TraesCS1B01G207100
TAGCGATCAGGCAGGGAATAGGAAGCGAAAGTTACGGAACGTACTGCGTTGGGGCTGTCGTTTCATCTACGATCGATCAA
TCCACGCGACGGGAAAGCGTATCGCTGAGACTTGACCGGACCAGGCCCAAGAAGGCCTAAAACTGAATTTTTTTCCAGAC
TACATATATGTATATGGACCCTAGTTGGGGGCCCCAGGATTTTGGGGCCCCTGTGCGAGCGCACAGCTCGCACATGCCCT
TGAACGGCCCTGCATGACGCGTAGGAATTGCTTCCACGGACTGGGCCCATTACTTGAGTTTACTGCCA------TTTTTT
TATTATTGGTTTCTTCCGGTTTTGGACTAGCTATGTTCTTTCGTTTTCTTTTAACATTTCTTCATGTTTTCCAATTTTGC
ATTTTATTTTTTTATTTTCACTTATATATATATATATATATGTTTTCTACATGGATTT-TTCCATAGTATACAAACATAC
ATTCATAGGAGTATGAACACTATTTTCATCTTTGATCTTTT-AAAAAATACTTAAATTTTGTAATGCATGTGTATTATTT
ATACATTTTTTTCAAACTCATGATGAATATTTTTCAAATATGTGATAATTTTT-CTTAAATATCCAATGAACATTCTTTA
----------------------AAATTCAGGATGAACA------------CAT---------------------------
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-----------------------GAATGAACAAAAAT-TAAAAATACACAATGAGTAATTAATAGTTTTGAAATGCATGA
TGTC-ATTTTAAATTATGCATACTTGAACATTTTATTTTTTTTCCTAAAATTTTATTT-CTTTTGACAGCCCATACAAGG
GCTGTGTGGGCGTTTCACCTCCTATTCGCCGCTTT-----------------------------------AAGCGTCAGA
AAAGAACACTCTAGC-ACCGCCATTTCCGTCGGCTAGGGCTGCTTTGCTTGTA----GAATCAAAAGGCCCATT------
-------CAGCATCCTGGTTGGTCCAAAAGCCCACGCGGTGTTCGACAACGTAATCGCCTTCGTCACCGCGACCACAGCG
CCGCCG------CCTCTCCTCCCCACCTACAAAGGCTACAAAACCCTAGCAAAATATCCCCATTCGATCGAGCCCCTTCC
TCCCCCCGCCCCCGCCC-CCACCCCCACCCCCGCCGATTCGATTCGATTCGATTCAAGCCGCCCCGCGCAAGATGATGCC
GGGGTCAGCCCCGCCGGCAGCCGGGAGCGGCATGTTCGTGCCGACGCAGACGGCGGGCACGGTGCTCTGCTGCATCTGCG
GCGTCTCCATGCAGCCCAACCCGGCCAACATGTGCGCCCGCTGCCTCCGGGCGCGCGTCGACATCACCGAGGGCGTCCCG
CGCAACGCCGCCGTCGTCTACTGCCCCGACTGCTTCTCCTACCTCCAGCCGCCGCGCTCCTGGCTCCGCGCCGGCCCGGA
GTCCCCCG-----------------------------AGCTCCTGCAGATCCTCCTCCGCCGCCTCAAGCACCCGCTCGC
CCGCCTCAAGGTCTCGCTCTCCGGCGCCGAGTTCGTCTTCTCCGAGCCCCACTCCAAGCGCCTCCGCCTCAAGCTCCGCC
TCCGCCGCGAGGTCCTCAACGGCATCGTCCTCGAGCAGACCCACTCCGTCGAGTTCGTCGTCCACGACCGCCTCTGCGAC
TCCTGCGCCCGCGCCCAGGCCAACCCTGACCAGTGGGTCGCCGTCGTCCAGCTCCGCCAGCACGTCCCGCACCGCCGCAC
CTTCCTCTACCTCGAGCAGCTCCTCATCAAGCATGGCCAGGCCGCACTCGCCATCCGCGTCGCCTCGGCTCCCGGCGGCC
TCGACTTCTTCTTCGGCTCGCGCTCGCACGCTGCCCGCCTCGTCGACTTCCTTGGTACAGTCGCTCCCATCCAGACCAAC
ACAGCCAAGCAGCTCGTCTCTCATGACACAAAGAGTTTTATCTATAACTACAAGTACACTTTCTCGGTCGAGATCTGCCC
CATATGCCGTGAGGACCTGATTGCCCTCAGCCCCAAGGCGTCCCGTGATCTTGGTGGACTAGGCCCGCTCGTCCTCTGCA
CCAAGGTCACCAATGCCATTGCGCTGCTTGACCCGCTCACTCTGCGTGTGCACCATCTGGAGGAGAAGAAGTACAGGGTG
TACAACTTCAAGGCCGCTCTGACTAGCAAGCAGCTCGTGCAGTACATGGTGCTTGATATTGAGCCAGAGTCACCTGAGAT
CACCATCGATGGATCTCGGTACCAGCTGGCATATGCGCAGGTCGCCCGCATGTCTGATTTTGGGAAAAATGATACTGTGT
TTACAGTACGAACTCATCTTGGGCACCGTCTGAGCCCTGGGGATCTTGCCCTTGGGTATGATCTCTATGGCGCCAATATG
AATGATGATGATATGGACAAGGCTTTATTACGCCAGAATTTGCCTGAAGTCATTCTGGTCAAGAAGAGCTATGAGAAGAG
GCGACGCACACGCAGATGGAAGCTGAAGAGGCTGCCTGTTGAGGAAGACCTTGGGAACAAGGCCAAAGGTGAGGAAGAGC
GGAGGGAAGATGAGTATACAAATTTCCTTGATGAGTTGGAGCGTGATCCAGAAATAAGGTTTACGATAAATCTGTACAAG
AACGACGACTACAGGTCAGAAATGGCATCCACGATTGGTGACGATGTCCCTACTGTGCCAATTGAGGAGTTGATTGAGGA
CCTAACCCTTGGTGATGATGAGGA---------GGAAGA---------CGGTGCAGATGCTGGTATGGTGGAATGAGCGA
GCATGTCTACCTACACCATTGGTCATGACTGTTCATGCCCACTGCAGGTCATAGGTCTGACTGCATCTGTTTAATTCATA
TAAGTTTTGTTTTTCTTTACTGCTATAAGCTATGAATGTCGGAGGTGTTGCTTAAAAGGTCTAAATTTTGGATTTCTCTG
TTTGTTGATGTCGACATTGTTTAAAACCATATCTCGTATCTTGGTGTAACAATAATGTCTCAAGTTAAATACATTTCCTA
TCATGTCATATGTTTGTGGAATGGTTTTCAGTTGTCATT-TTTGATTGGTCACAATATCATGGAGTGGATGCAAGATTTG
ATTCTTGAAACATGTGTTTATG----------------------------------------------------------
-----------------------------------------------TTGCTGAGTGATTACTGATTATTGGATGTCTTT
CAGGGATTAGCTGAATGGTCTTTCCTAGAATGGTCAACTGAGAGCTTTTCCCCTCTTGCTCTGTCCCAATTGTATCTATG
AGTGCAGCTGAATAGCTGTTGT-GATTTTGTTGAGGCTGCATTACAGGTCTCACTGAAAATTGTTCAGCGGATGGTGTGC
TCTGCAGCCCTCTGCTGGTTTGTAATGCATGGACTCACCCGTGACTAGTTTAGAAGTTAAACAACTTGGTAAGATGGTTA
TGCG----TACAACGCATGTTTGCTTTCCTTTTCTTTTCAGTAGAGAATGGCAGAGCTGTTTGTAGTATAATTTGTCAAT
TGGGATGTTTAGAACATGAATGCACCACACTATGTCTCGTGTCTTTGTGCCAAAACAGCCCAGTGAACTGATTTGAAATG
ATGCAGTGTGTGTAGTTGCATTGCTTGTGTGTTGG---ATAAGTTGAGACATACCTATATCTTACTGTTCTTCAGTTAGA
AATTATTCAACATAGGTGGCTACTTTTTCCAAGCTCGTGGCCTCTGGTCTCCCATGTTCCTCTTTTGAACCCAATTCCTT
CCATTTCTGCGGAAAGCTTTTTGTACCGATCTCTGTTTTCTTACCGATCTCTGTTTTCTCCCCGTGAGAAAACCCACTAC
ATCGATTACAGTCATGTTAGCAACAGAGTCTCACCTGCAACGTCATATAGCGCTACGGACTCAGAAGGTGCTGCTTGTGT
GGTACCCATTTGTGGTGGAGTACTAACTTAAAGTTGATGAGTTGTTTTTCCCAACGCCCCTCATCCCCAAGG--CAGACA
TACCAGGATAGCAATTGCAGTGT--GTCGCTCAAAGATCTGAAGCTTTG
>chr1D_252
GCATGGCACC----------------------------------------------------------------------
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---------------------TAGGAATTGCTTCCACGGACCGGGCCCATTACTTGAGTTTATTGCCAGTTTTTTTATTA
TGTTCTCGGTTTCTTCCAATTTAGA-----CTATGTTCTTTCGTTTTCCTTTTACATTTCTTCATGTTTTCTA-------
-------------ATTTTTCCTTTTAGATATATACTA--ATTTTTTATAGATGGATTT-CCCCACAGTATACAAACATAT
ATTCATAGGAGTATGAACACTATTTTCATCTTTGAACTTTT-AAAAAATACTTACATTTTGTAATGCATGTGTATT----
------TTTTTTCAAACTCATGATGAATATTTTCCAAATATGTGATGA-TTTT-CTTAAGTATGCAATGAACATTCTTTC
AAATACGTGATGGATATTTTTCAAATTCAGGATGAACATTTTTTAAAATACAT---------------------------
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-----------------------GAATGAACAAAATT-TTAAAATACACAATGAGCGACTAATAGTTTTGAAATGCACGA
TCTTTATTTTAAATTATGCATACTTGAACATTTTAA--TTTTTCGCAAAATTTTATTCCTTTTTGACAGCCCATACAAGG
GCTGTGTGGGCGTTTCACCTCCTACCCGGCGCTTTAAGCGTCAGATAGGATTGTTTTGTTTTTTGAGGAAAAGCGTCAGA
TAGGAGCACTCCGCCATTC------CCCGTCGGCTAGGGCTGCTTTGCTTGTA----GAACCAAAAGGCCCATTTCGCCC
AACGGTGCAGCATCCTGGTTGGTCCAAAAGCCCACGCGGTGTTGGACAACGTAATCGCCTTCGTCACCGCGACCACAGCG
CCGCCGCCTCTCCCTCTCTTCCCCACCTACAAAGCCTACAAAACCCTAGCGAAATATCTCCATCCGATCGAGCCCCCTCC
C-------------CCC-CCGCCCCCACCCCAGCCGATTCGATTCGATTCGATTCAAGCCGCCCCGCGCAAGATGATGCC
GGGGTCAGCCCCGCCGGCCGCCGGGAGCGGCATGTTCGTGCCGACGCAGACGGCGGGCACGGTGCTCTGCTGCATCTGCG
GCGTCTCCATGCAGCCCAACCCGGCCAACATGTGCGCCCGCTGCCTCCGGGCGCGCGTCGACATCACCGAGGGCGTCCCG
CGCAACGCCGCCGTCGTCTACTGCCCCGACTGCTTCTCCTACCTCCAGCCGCCGCGCTCCTGGCTCCGCGCCGGCCCGGA
GTCCCCCG-----------------------------AGCTCCTGCAGATCCTCCTCCGCCGCCTCAAGCACCCGCTCGC
CCGCCTCAAGGTCTCGCTCTCCGGCGCCGAGTTCGTCTTCTCCGAGCCCCACTCCAAGCGCCTCCGCCTCAAGCTCCGCC
TCCGCCGCGAGGTCCTCAACGGCATCGTCCTCGAGCAGACCCACCCCGTCGAGTTCGTCGTCCACGACCGCCTCTGCGAC
TCCTGCGCCCGCGCCCAGGCCAACCCCGACCAGTGGGTCGCCGTCGTCCAGCTCCGCCAGCACGTCCCGCACCGCCGCAC
CTTCCTCTACCTCGAGCAGCTCCTCATCAAGCATGGCCAGGCCGCGCTCGCCATCCGCGTCGCCTCCGCGCCCGGCGGCC
TCGACTTCTTCTTCGGCTCGCGCTCGCACGCTGCCCGCCTCGTCGACTTCCTTGGTACAGTCGCTCCCATCCAGACCAAC
ACAGCCAAGCAGCTCGTCTCTCATGACACAAAGAGTTTTATCTACAACTACAAGTACACTTTCTCGGTCGAGATCTGCCC
CATATGCCGTGAGGACCTGATTGCCCTCAGCCCCAAGGCGTCCCGTGATCTTGGTGGGCTAGGCCCGCTCGTCCTCTGCA
CCAAGGTCACCAATGCCATTGCGCTGCTTGACCCCCTCACTCTGCGTGTGCACCATCTGGAGGAGAAGAAGTACCGGGTG
TACAACTTCAAGGCCGCTCTGACTAGCAAGCAGCTCGTGCAGTACATGGTGCTTGATATTGAGCCAGAGTCACCTGAGAT
CACCATTGATGGATCTCGGTACCAGCTGGCATATGCGCAGGTCGCCCGGATGTCTGATTTTGGGAAAAATGATACTGTGT
TTACAGTCCGAACTCATCTTGGGCACCGTCTGAACCCTGGTGACCTTGCCCTTGGGTATGATCTCTATGGTGCTAATATG
AATGATGATGATATGGACAAGGCTTTATTACGCCAGAATTTGCCTGAAGTGGTTCTGGTCAAGAAGAGTTACGAGAAGAG
GCCACGCACACGCAGATGGAAGCTGAAGAGGCTGCCTGTTGAGGAAGACCTTGGGAACAAGGCCAAAGGCGAGGAAGAGA
GGAGGGAAAATGAGTATGATATGTTTGTTCGTGATTTGGAGTCCGATCCAGAACTAAGGTTTGGGATAAATTTGTACAAG
AACGAGGACTACAGGTCAGAAATGGCATCCACGATTGGCGACGATGTCCCTACTGTGCCAATTGAGGAGTTGATTGAGGA
CCTAACCCTTGGTGATGATGAGGA---------TGAAGAGGAGGAAGAGGGTGCAGATGCTGGTATGGTGGAATGAGCGA
GCATGTCTACCTAGACCATCAGTCATGACTGTTCATGCCCACTGCCGATCATAGGGCTGACTGCATCTGTTTAATTCATA
TAAGTTTTGTTTTTCTTTACTGCTATAAGCTATGAATGTCGGAGGTGTTGCTTAAAAGGTCAAAGTTTTGGATTTCTCTG
TTTATTGATGTCGACATTGTTTGAAACCATATCTCGTATCTTGGTGTAACAGTAATGTCTGAAGTTAAATACATTTCCTA
TCATGTCATATGTTTGTGGTATGGTTTTCAGTTGTCATT-TTTGATTGGTCACAATATCATGGAGTGGATGCAAGATTTG
ATTCTTCAAACATGTGTTTATATTGCTGTGTGATTACTGATTATTGGACGTCTCTCAGGGATTAGCTGAATGTTCTTTCC
TAGAATGGTCACATGAGAGCTTTTCCCCTCTTGCTCTGTCTCAATTATTGCTGTGTGATTACTGATTATTGGATGTCTCT
CAGGGATTAGCTGAATGTTCTTTCCTAGGATGGTCACCTGAGAGCTTTTCCCCTCTTGCTCTGTCTCAATTGTATCTATG
AATGCAGCTGAATAGCAATTGT-GATTTTGTTGAGGCTGCATTACAGGTCTCACTGAAAATTGTTCAGCGGGTGGTGTGC
TCTGCAGCCCTCTGCTGGTTTGTAATGCATGGACTCACCCGTGACTAGTTTAGAAGTTAAACAACTTGGTAAGATGGTTA
TGACATACTACAACGCATGTTTGCTTTCCTTTTCTTTTCAGTAGAGAATGGCAGAGCTGTTTGTAGTATAATTTGTCAAT
CGGGATGTTTAGAACATGAATGCACCACACTATGTCTCGTATCTTTGTGCCAAAACAGCCCAGTGAACTGATTTGAAATG
ATGCAGTGTGTGTAGTTGCATTGCTTGTGTGTTGTACTATAAGTTGAGACATACCTATATCTTTCTGTTCTTCAGTTAGA
AATTATTCAACATAGGTGGCTACTTTCTCCAAGCTCGTGGCCTCTGGTCTCCCATGTTCCTCTTTTGAACCCAATTCCTT
CCATTTCTGCGAAAAGCTTTTTGTACC------------------GATCTCTGGTTTCTCCCCGTGAGAAAACCCACTAC
CTCGATTACAGTCATGTTAGCAACAGAGTCTCACCTGCAATGTCATATAGCGCTACGGACTCAGAAGGTGCTGCTTGTGT
GGTACCCATTTGTGGTGGAGTACTAACTTAAAGTTGATGAGTTATTTTTCCCAACGTCCCTCATCCCCAAGGCACAGACA
TACCAGGATAGCAATTGCAGTGTCTGTCGCTCAAAGATCTGAAGCTTTG
>chr1A_437
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------------------------------------------TTTTATAGATGGATTTTCCCCATAGTATACAAACATAT
ATTCATAGGAGTATGAACACTATTTTCATCTTTGAACTTTAAAAAAAACACTTACATTTTGTAATCCATGTGTATT----
------TTTTTTCAAACTCATGATGAATATTTTTCAAATATGTGATGA-TTTTTCTTAAATATGCAATGAACATTCTTTC
AAATACATGATGAATATTTTTTAATTTCAGGATGAACATTTTTTAAAATACATGAATACAACAACAACAACAACAACAAC
AAAGCCTTTAGTCCCAAACAAGTTGGGGTAGGCTAGAGGTGAAACCCATAAGATTTTGCAACCAACTCATGGCTCTGGCA
CATGGATAGCAAGCTTCCACGCACCCCCTGTCCATAGCTAGCTCTTTGTCGATACTTCAATCCTTCAGGTCTCTCTTAAC
GGACTCCTCCCATGTCAAAATCGGTCGACCCCGCCCTCTCTTGACATTCTCCGCACGCTTTAGCCGTCCGCTATGCACTG
GAGCTTCTGGAGGCCTGCGCTGAATATGCCCAAACCATCTCAAACGATGTTGGACAAGCTTCTCCTCAATTGGTGCTACC
CCAACTCTATCTCGTATATCATCATTCCGGACTCGATCCTTCCTCGTGTGGCCACACATCCATCTCAACATACGCATTTT
CGCCACACCTAACTGTTGAACATGTCGCCTTTTAGTCGGCCAACACTCCGCGCCATACAACATTGCGGGTCGAACCGCCG
TCCTATAGAACTTGCATTTTAGCTTTTGTGGCACTCTCTTGTCACAGAGAATGCCAGAAGCTTGGCGCCACTTCATCCAT
CCGTCTTTGATTCGATGGCTCACATCTTCATCAATACCCCCATCCTCCTGCAACATTGACCCCAAATACCGAAAGGTGTC
CTTCCGAGGTACCATCTGGCCATCAAGGCTAACCTCCTCCTCCTCACAGCTAGTAGTACTGAAACCGCACATCATGTACT
CGGTTTTAGTTTTACTAAGCCTAAACCCTTTCGATTCCAAGGTTTGTCTCCATAACTCTAACTTCCTATTTACCCCCGTC
CGACTATCGTCAACTAGTACCACATCATCCGCAAAGAGCATACACCATGGGATATCTCCTTGTATATCCCTTGTGACCTC
ATCCATCACCAATGCAAAAAGATAAGGGCTCAAAGCTGACCCCTGATGCAGTCCTATCTTAATCGGGAACTCATCGGTGT
CGACATCACTTGTTCGAACACTTGTCACAACATTATTGTACATGTCCTTGATGAGGGTAATGTACTTTGCTGGGACTTTG
TGTTTCTCCAAGGCCCACCACATGAATGAACAAAAAAATTAAAATACACAATGAGCGATTAATAATTTTGAAATGCACGA
TGCC-ATTTTAAATTATGCATACTTGAACATTTTAA--TTTTTCGCAAAATTTTATTTCCTTTTGACAGCCCATACAAGG
GCTGTGTGGGCGTTTCACTTCCCATTCGACGCTTT-----------------------------------AAGCGTCAGA
TAGGAGCACTCCAGAGACCGCCATTCCCGTCGGCTAGGGCTGCTTTGCTTGTAAGTAGAACCAAAAGGCCCATT------
-------CAGCATCCTGGTTGATCCAAAAGCCCACGCGGTGTTGGACAACGTAATCGCCTTCGTCACCGCGACCACAGCG
CCGCCGCCTCT-CCTCTCTTCCCCACCTACAAAGCCTACAAAACCCTAGCGAAACATCTCCATCCGATCGAGCCCCCTCC
T-------------CCCTCCGCCCCCACCCCAGCCGATTCGATTCGATTCAGCCCT-----CCCCGCGCAAGATGATGCC
GGGGTCAGCCCCGCCGGCCGCCGGGAGCGGCATGTTCGTGCCGACGCAGACGGCGGGCACGGTGCTCTGCTGCATCTGCG
GCGTCTCCATGCAGCCCAACCCGGCCAACATGTGCGCCCGCTGCCTCCGGGCGCGCGTCGACATCACCGAGGGCGTCCCA
CGCAACGCCGCCGTCGTCTACTGCCCCGACTGCTTCTCCTACCTCCAGCCGCCGCGCTCCTGGCTCCGCGCCGGCCCGGA
GTCCCCCG-----------------------------AGCTCCTGCAGATCCTCCTCCGCCGCCTCAAGCACCCGCTCGC
CCGCCTCAAGGTCTCGCTCTCCGGCGCCGAGTTCGTCTTCTCCGAGCCCCACTCCAAGCGCCTCCGCCTCAAGCTCCGCC
TCCGCCGCGAGGTCCTCAACGGCATCGTCCTCGAGCAGACCCACCCCGTCGAGTTCGTCGTCCACGACCGCCTCTGCGAC
TCCTGCGCCCGCGCCCAGGCCAACCCCGACCAGTGGGTCGCCGTCGTCCAGCTCCGCCAGCACGTCCCGCACCGCCGCAC
CTTCCTCTACCTCGAGCAGCTCCTCATCAAGCATGGCCAGGCCGCGCTCGCCATCCGCGTCGCCTCGGCTCCCGGCGGCC
TCGACTTCTTCTTCGGCTCGCGCTCGCACGCTGCCCGCCTCGTCGACTTCCTTGGTACAGTCGCTCCCATCCAGACCAAC
ACAGCCAAGCAGCTCGTCTCTCATGACACAAAGAGTTTTATCTATAACTACAAGTACACTTTCTCGGTCGAGATCTGTCC
CATATGCCGTGAGGACCTGATTGCTCTCAGCCCCAAGGCGTCCCGTGATCTTGGTGGACTAGGCCCGCTCGTCCTCTGCA
CCAAGGTCACCAATGCCATTGCCCTGCTTGACCCCCTCACTCTGCGTGTGCACCATCTGGAGGAGAAGAAGTACCGGGTG
TACAACTTCAAGGCCGCTCTGACTAGCAAGCAGCTCGTGCAGTACATGGTGCTTGATATTGAGACAGAGTCACCTGAGAT
CACCATTGATGGATCTCGGTATCAGCTGGCATATGCGCAGGTCGCGCGGATGTCTGATTTTGGGAAAAATGATACTGTGT
TTACAGTCCGAACTCATCTTGGGCACCGTCTGAACCCTGGTGACCTTGCCCTTGGGTATGATCTCTATGGTGCCAATATG
AATGATGATGATATGGACAAGGCTTTATTACGCCAGAATTTGCCTGAAGTGGTTCTGGTCAAGAAGAGTTACGAGAAGAG
GCCACGCACACGCAGATGGAAGCTGAAGAGGCTGCCTGTTGAGGAAGACCTTGGGAACAAGGCCAAAGGCGAGGAAGAGA
GGAGGGAAAATGAGTATGATATGTTTGTTCGTGATTTGGAGTCCGATCCAGAACTAAGGTTTGGGATAAATTTGTACAAG
AACGAGGACTACAGGTCAGAAATGGCATCCACGATTGGTGACGATGTCCCTACTGTGCCAATTGAGGAGTTGATTGAGGA
CCTAACCCTTGGTGATGATGAGGATGAAGAGGAGGAAGA---------GGGTGCAGATGCTGGTATGGTGGAATGAGCGA
GCATGTCTACCTAGACCATTGGTCATGACTGTTCATGCCCACTGCAGGTCATAGGTCTAACTGCATCTGTTTAATTCATA
TAAGTTTTGTTTTTCTTTACTGCTATAAGCTATGAATGTCGGAGGTGTTGCTTAAAAGGTCTAAGTTTTGGATTTCTCTG
TTTGTTGATGTCGACATTGTTTGAAACCATATCTCGTATCTTTGTGTAACGATAATGTCTTAAGTTAAATACATTTCCTA
TCATGTCATATGTTTGTGGTATGCTGTTCAGTCGTCATCGTTTGATTAGTCACAATATCATGGAGTAGATGCAAGATTTG
ATTCTTGAAACATGTGCATATTGTG-------------------------------------------------------
----------------------------------------------------GTGTGATTACTGATTATTGGATGTCTCT
CAGGGATCACCTGAATGTTCTTTTCTAGAATGGTCACCTAAGAGTTCTTCCCCTCTTGC-CTGTCCCAATTGTATCTATG
AATGCAGCTGAATGAGGTATTGCGATTTTGATAGGGCTCTGTTACAGGTCTCACTGGAAATTGTTTAGCT-GTGGTGTGC
T-------------------------------------------------------------------------------
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>chr1A_1193
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--------------------------------------------------------------------GCTGCATCCGCA
GCGTCTCCATGCAGCCCAACCCGGCCAACATGTATGCCTGCTGCCTTCAGGCGCGCGTTGACATCACCCAGGGCGTCCCG
CGTAACGCCGCCGCCGGCTGCTGCCCCGACTGCTTCTCCTACCTCCAGCCGCAGCGCTCCTGGCTCCGCGCCGGCCCGGA
GTCCCCCG-----------------------------AGC------------------------------ACCCGCTCGC
TCGCCTCCGGATCTCGCTCTCCGGCGTCGAGTTCGTCTTCTCCGAGCCCCACTCCAAGCGCCTCTGCCTCAAGCTCCGCC
TCCGCAGCGAGGTCCTCAACGACATCGTCCTCGAGCAGACCCACCCCGTCGAGTTCGCCGTCCACGACCGCTTCTGTGAC
TCGTGCGCCCGCGCCCAG-CCAAGCCCGACCAGTGGGCCGCCCTCGTCCAGTTCCGCCAGCACGTTCCACACCGCCGCAC
CTTCCTC--------GCAGCTCCTCTTCAAGCATGGCCAAACCGCGCTCGCCATCCGCGTCGCCTCGGCTCCCGGCGGCC
TCAACTTCTTCTTCGGCTCACGCTCGCACGCCGCAAGCCTCGTCGTCTTC-TTGGTACAGTCG-----------------
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>chrUn_1194
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---------------------------------------------------------------------CTGCATCCGCG
GCTTCTCCAAGCAGCCCAACCCGGCCAACATGTAGGCCCGCTGCCTTCGGGCGCGCGTCGACATCACCGAGGGCGTCCCG
CGCAACGCCGCTGTCGGCTACTGCCTTGACTGCTTCTCCTACCTCTAGCCGCCGCACTCATGGCTCCGCGCCGGCCCGGA
GTCCCCGAGCTCCTACAGATCCTCCTGCGCCGCCTCAAGC------------------------------ACCCGCTCGC
CCGCCTCCGGATCTTGCTCTCTGGCGCCGAGTTCGTCTTCTCCGAGCCCCACTCCAAGCGCATCCGCCTCAAGCTCCGCC
TCCGCCATGAGGTCCTCAACGGCATCATCCTCGAGCAGACCCACCCCGTCGAGTTCGTCATCCACGACCGCCTCTGCGAC
TCGTGCGCCTACGCCCAGGCCAACG-TGACCAGTGGGTCGCCCTTGTCCAGTTCCGCCAGCACGTTCCACACTGCCGTGC
CTTCCTC--------GCAGCTCCTCTTCAAGCATTGCCATGCCGCGCTCGCCATCCACGTCTCCTCGGCTCCCGGCAGCC
TCAACTTCTTCTTCGGCTTGCGCTCGCACACCGTCCGCCTCGTTGTCTTC-TTGGTACAGTCG-----------------
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>SNPs
SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS--------------------S--------------------S-------------S--S
-S--S-S----------SS---S-SSSSSS------------------S---S------------------S-SSSSSSS
SSSSSSSSSSSSS-----SS---S--S-------SSSSS--S----S--S---------SS------------------S
-----------------------------------S------------------S---------------------SSSS
SSSSSS----------------------------------------S-S--------------S---------------S
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---------------------------------------S---------------SS--------------------S--
-----------------------------------SSS------SS----------------------------------
----------------------------S---------------------------------------------------
S-S--S-----S-------------S----------------------------------S-------------------
-------------------------------------------S------------------------------------
------------------S---------------S---------------S-------S----S------------S---
-SSSSSSSSSSSSS------S----------S------------------------------------------------
------------------S-------------------------------------------------------------
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--------------------------------------------S-----------------------------------
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---------------------------------------------S----------------------------------
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----------------------------------S---------------------------------------S-----
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------S-----------------------------------------S-------------------------------
-------S-------------------------S------S--S--------------------------S---------
--------------------------------------------------SS----------------S--S--------
--S------------------------------------------------------------------S---------S
--------S--------SSS-SS--SS--SS---S------SSS---------S--------SS-------S--------
-----S--------------------------------------------------------------------------
------------------------------------------------S-------------------------------
-------------S------------------------------------------------------------------
----------------------------------------------------------------S---------------
----------------------S-------------------------------------S-------------------
-------------------S------------------------------------------------------------
---------------------S----------------------------------------------------------
-----------------------------------------------------S------------------------S-
-----------------S------------------S-------------------------------------------
-S--------------SS-----------------------------------------------------S--------
--------------------------------------------------------------------------------
--SS----------------------------------------------------------------------------
S---------------------------------------S---------------------------------------
----------------------------------S----------------------------S----------------
--------------------------S-----------------------------------------------------
-----------S---------------SSSSSSSSSSSSSSSSSS--------S--------------------------
S---------------------------------------S---------------------------------------
-------------------------------------------S------------S-----------------------
-------------------------------------------------
>forward_29
---------GGCAGGGAATAGGAAGCGAA---------------------------------------------------
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>reverse_2224
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---------------------------------------------------------------TCGATCGAGCCCCTTCC
TC------------------------------------------------------------------------------
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-------------------------------------------------
>forward_124
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------------------------CTGAGACTTGACCGGACCAG------------------------------------
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>reverse_3275
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--------------------------------------------------------------------------AGGGTG
TACAACTTCAAGGCC-----------------------------------------------------------------
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>forward_2026
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------ACACTCTAGCACCGCCATTT------------------------------------------------------
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>reverse_3367
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------CGATGGATCTCGGTACCAGC------------------------------------------------------
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>forward_2242
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--------------------------------------------------------------TTCGATCGAGCCCCTTCC
TC------------------------------------------------------------------------------
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>reverse_3448
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-------ACGAACTCATCTTGGGCACC-----------------------------------------------------
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>forward_2765
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--------------------------GTCCTCGAGCAGACCCACT-----------------------------------
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>reverse_3589
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--------------------------------------------------------------------CTATGAGAAGAG
GCGACGCA------------------------------------------------------------------------
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>forward_3571
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------------------------------CGCCAGAATTTGCCTGAAGTC-----------------------------
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>reverse_5164
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-------------------------------------------GTTTTTCCCAACGCCCCTCA-----------------
-------------------------------------------------
