>input_sequence_41641
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------------------------------------------ATGGACACCGCCATGCACCCCGCCGGCG----------
--GC------------CTCGCCGACCTGCTTACCGACAACGCCGGCACCGGCACCGGCACCGAGGTAG------------
--------TACAAAAATCACATCTCTCTCTGTCGTTTTACTACG------------TACTATTTTCGTGTG---TACTTT
GAAGTTCTTTTTT-CACCCTCGAGTAGCATGCGTGTATTTTTTTATATATGAAAGAAAGATGTGCGAAAGAA-AAAAAAA
TATCACGGCCGTTCCATCCA-------GCTTTTGTACCGTTGTGAGAGTGAGATATGGCTTGGACTTTTCCGGATGCGGA
ACCGTGTGGTGCGCTCTAGGCTGCAGTTTTCGGTTGTGGCCTTCAGTTCCGTGTGGGTGGGCCCCTGCCTCAGCCCGCTC
CTTGGTCCTTGCTTGCTTCTTTATTACAGCTCCTTGCCACTCGGCCCCGAATATTCGCTCCCCACAGGCCACGCGAATAT
GCCTTCAGAGATG------CTCTCCCTCTCTGAAGAAAAAACTTCGTCAGTGTGTGGCTTGCTTAACCTGCAAGCAGCAG
TGCTAGCAGGTGCTTAGGTCAAGTCAAGAGACGGTATA---GCATATTATGCTATGGTTAATCACTTTCTTAAGCGTGAG
ACAGTATAGCATATTATGCTATGGTTAATCACTTTCTTAAGCGTGAGACAGGCTGTCTTTGACGCTAGAGCTGTCGCTCC
TGCGGCCCCACCTGCCTGTGCCTGCTCGCCATTGAGAGTGACACAAGGGACTTTTCTGTAATTATTTGGGGTGGGGGG-T
CCTCTGACTAGAGATATTTGTGATAGGGTCACTTTCTCCTCT-CACTGTCCATGTTTGTCCACAAAGCCAAGGGGCTTCG
CTGCAAGTGAGCACCACATGATTTTGTCACTTAAGTGCTCCCAACCACAGCATGGTCCAGAG-----TAGCATAAAAGTA
CAAGGTATGCAACTGCGTGGACACATGATTGTTGTTATGGAGGCTGTAATATTCCATCTTTGTG----------------
-------------------------------------------------GCACTCTGAAATA------------------
-------------------------------------------------GATTCACAAGACAGATAGGTTGAAGGTAAAC
TGGCTGAGC--TATGTATAAATAATAAAACTGAGGTTGTTCAGCCTCTTTACA----------TGAGGGGTGAGATCAGG
CTTCACAAGCCTTAAGTTTCAGCTGGTCTGCTCCTTAACTGCTAA----------------------------GCAGCCG
GTTCTAGGATATCAAACGGGGTTGTTGTTTATTGAGCCGTGCTCTTGTTGCTTACTAATATGAGATGCTAAGTTTACCAT
TAAGAAAAAGG----AATGATCTGCTGCCATGCCCCTCGTTATTTACTAGCTTTTGGCCACTTTAC-TAATCCTTTGTTC
TTGTGTTGTGCTTGTGGGTTTTTAAGCTTTGTTTCAAGCTTTGGTCTGGATGCTGTTTGTGCTTGTGGGTTTTTCAGTTT
TGTTTCAAGCTTTGGTCCGGATGCTGGTTTTTTGACTTAACTATGTTTGCCTGATCCTTGTACAGGGCATTATTTGTGGC
ATGCCAGACTTCAAGATGGGTGGAAAGAGGGGCGATGAATCTGCCCCTACTGATGCTGGTGATGAAGATGGCGAAGATGA
TGACGGGGATGAGGATGGTGACTTCGCGGAGGGCGAAGAGGAAATCTCGGAAGGAGAGGAGTATGACAACCCCAAGGCCA
GTGACGCCAAGAAGAAACAAATAGGCGAGGGTGAGGAGAATGGCGAGGATGATGAGGAAGAACAAGAGGAGCAGGACGGT
GGAGGAGGTGACGACGATGATGATGATGACGA---CGATGATGACAATGAGGACGACGACGATGATGACGACGATGTCGC
TGCTGAAGACGATGAGGATGGAGTAGAAGAGGAGGATGACGACCAGGACAACGACGATGATGAGGAGGACGATGACGAGG
ACTCGCTCCAGCCCCCGAAGAAGAAGAAGAAGTGA---------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------
>chr2A_1_TraesCS2A01G526500
GGTGGGGATCTGGCCGTTTGATCCGACGATGATTAT---CCC-TTCCTTCCGCCTCTCTCTCTCTCTCTCTCAAACGGAT
TTCCTGCCATGCACCGGGTCCTTGTACAATCCAGCGGAACAAAATCTCTCTTCGGTCCTCGGGTTAGTGGAGAATTCACG
TCTTTGCCCTCCGCGCACACATCACTGCCCACCTGCCCCTTCTGCCCGCGCTGCCCGCTCCTCTATCCCT------TCTC
TCTCCAGCATCCTCTTTCTCTCCTCCCTCCCATGGCCATGGAGTCGGC-CTAGCCAGTTGTGCCCGTTGAGAGCGCTCAT
ATACCCTCAGAGACGGACCTCCAGATCTGTGGTCTGTTGTAGTCTCTCTGCTTCCTCAAAACAAGG-------TAACCTC
TCATGTTTACATCGCCTTTATTAACGCATCTCAACTGCTTTTTACACCTGCTTGTGGTAGTATGC-------ATAATCAT
ATCTTTGTTGTTCATCCTGGTAATTTACCCTAGCCGCTCA-AGGTTTGAG-TTGGCACCTGTTCTAGGCTCTGCTCTGCT
CTGACAGACCACGGCAAATTGTGCTATGAATTCGTTTGCGTGCACCTGCAGAGTCTGAAACCTTCAGGATTCAGCACAGA
TTTTCTCACTCGCTGAGAGAAATAAATACTAGTGCT-----CTCGTTTTCTGTATACTCGTTTTTCTCTCTTATC--TTT
CCCTGGCACTTCTGTGAGCTTTCTGTTCAG---------------------AGAAAAGTTGTGTTTTCACGTCTCTTCTC
TGACCTACCAGTAGC---GGAGGATAGGGTGGA-GTTTTGCTAGAATTAGGCGCAACAAAATCTCTGGGAAGAATCGC-T
TTTTTCTGCCGGCCCAAACCTTGTTGGGAAAGTAGAATGTTGCGGGCGGAGGTTTTAAGGTTTCCTGCTGCTGCCTCTGC
CT---------------CTAACTAACGGTAAAAGTAAAG-CCTTATCTCTGACTGACGT--GTGTTGATTTCTCCTGCCT
GCCCAC----GTGTTCAGCCCCTGCAGCCGCGCCCGGATCGGATGGACACCGCCATGCACCCCGCCGGCG----------
--GC------------CTCGCCGACCTGCTTACCGACAACGCCGGCACCGGCACCGGCACCGAGGTAG------------
--------TACAAAAATCACATCTCTCTCTGTCGTTTTACTACG------------TACTATTTTCGTGTG---TACTTT
GAAGTTCTTTTTT-CACCCTCGAGTAGCATGCGTGTATTTTTTTATATATGAAAGAAAGATGTGCGAAAGAA-AAAAAAA
TATCACGGCCGTTCCATCCA-------GCTTTTGTACCGTTGTGAGAGTGAGATATGGCTTGGACTTTTCCGGATGCGGA
ACCGTGTGGTGCGCTCTAGGCTGCAGTTTTCGGTTGTGGCCTTCAGTTCCGTGTGGGTGGGCCCCTGCCTCAGCCCGCTC
CTTGGTCCTTGCTTGCTTCTTTATTACAGCTCCTTGCCACTCGGCCCCGAATATTCGCTCCCCACAGGCCACGCGAATAT
GCCTTCAGAGATG------CTCTCCCTCTCTGAAGAAAAAACTTCGTCAGTGTGTGGCTTGCTTAACCTGCAAGCAGCAG
TGCTAGCAGGTGCTTAGGTCAAGTCAAGAGACGGTATA---GCATATTATGCTATGGTTAATCACTTTCTTAAGCGTGAG
ACAGTATAGCATATTATGCTATGGTTAATCACTTTCTTAAGCGTGAGACAGGCTGTCTTTGACGCTAGAGCTGTCGCTCC
TGCGGCCCCACCTGCCTGTGCCTGCTCGCCATTGAGAGTGACACAAGGGACTTTTCTGTAATTATTTGGGGTGGGGGG-T
CCTCTGACTAGAGATATTTGTGATAGGGTCACTTTCTCCTCT-CACTGTCCATGTTTGTCCACAAAGCCAAGGGGCTTCG
CTGCAAGTGAGCACCACATGATTTTGTCACTTAAGTGCTCCCAACCACAGCATGGTCCAGAG-----TAGCATAAAAGTA
CAAGGTATGCAACTGCGTGGACACATGATTGTTGTTATGGAGGCTGTAATATTCCATCTTTGTG----------------
-------------------------------------------------GCACTCTGAAATA------------------
-------------------------------------------------GATTCACAAGACAGATAGGTTGAAGGTAAAC
TGGCTGAGC--TATGTATAAATAATAAAACTGAGGTTGTTCAGCCTCTTTACA----------TGAGGGGTGAGATCAGG
CTTCACAAGCCTTAAGTTTCAGCTGGTCTGCTCCTTAACTGCTAA----------------------------GCAGCCG
GTTCTAGGATATCAAACGGGGTTGTTGTTTATTGAGCCGTGCTCTTGTTGCTTACTAATATGAGATGCTAAGTTTACCAT
TAAGAAAAAGG----AATGATCTGCTGCCATGCCCCTCGTTATTTACTAGCTTTTGGCCACTTTAC-TAATCCTTTGTTC
TTGTGTTGTGCTTGTGGGTTTTTAAGCTTTGTTTCAAGCTTTGGTCTGGATGCTGTTTGTGCTTGTGGGTTTTTCAGTTT
TGTTTCAAGCTTTGGTCCGGATGCTGGTTTTTTGACTTAACTATGTTTGCCTGATCCTTGTACAGGGCATTATTTGTGGC
ATGCCAGACTTCAAGATGGGTGGAAAGAGGGGCGATGAATCTGCCCCTACTGATGCTGGTGATGAAGATGGCGAAGATGA
TGACGGGGATGAGGATGGTGACTTCGCGGAGGGCGAAGAGGAAATCTCGGAAGGAGAGGAGTATGACAACCCCAAGGCCA
GTGACGCCAAGAAGAAACAAATAGGCGAGGGTGAGGAGAATGGCGAGGATGATGAGGAAGAACAAGAGGAGCAGGACGGT
GGAGGAGGTGACGACGATGATGATGATGACGA---CGATGATGACAATGAGGACGACGACGATGATGACGACGATGTCGC
TGCTGAAGACGATGAGGATGGAGTAGAAGAGGAGGATGACGACCAGGACAACGACGATGATGAGGAGGACGATGACGAGG
ACTCGCTCCAGCCCCCGAAGAAGAAGAAGAAGTGAAGCCCTTCGACGCGGCTGCTTTAGTCACCATGCAATGAGATGTGC
CTGTTCTTCACTGTGTTCTGGAAACTTTCCTTAGAGTTAAAAATG-CCCCACACGATCACAATGTGTGGGCTTGTAGGAG
CGATTAGAGGGAACTTTGTTGTCACCGTTGCTTTGCTTCTGTGGAGTTGATCGAACAGATGTTTCGCTAACATAATTGTA
CCTGAGTGGCGAAAGCCTCAAGATTTGAATATGTCAGTCAACTCTTTTTATCTCCTTCCGGCATCGTTCT--GTGCAATC
TTGTTCAGAACACATTGTGTTGGTAGCTCCTTAAATAAGGCCAAATCACATTGTTGATAGCTCCTGGATTTATCGTGGGT
GCTGTCTGGTTTCTGCATAATTCTGCTGATGATGGTGACTAGATGATTACGCTAATGTCTAGATATATGGCTTGTTAGTG
TAGTACCCCCTCTGTTTTAAAATAATTGTCTCAACTTTGTACTAACTTATTTTAATATAAAATTGTACTAAAGTTCTGAC
ACTTATTTTAAGACGGAAGGGGTATTTTCTATATAATTAAACAGAACACATCTCTGTCCAAAAGAAAATAAA-AGAACAT
CTCCCTTGGTCTTTGCACACTGTCCAAGCGGCATGGCTCAGATGTCACACCCATAGGCGTGATCTAGGAAGGTGCCAAAG
TGCCACTTGATGCCACCCTTCAGAGAAGT---------------------------------------------------
-----------------------------------------------------------------------AAG------
---------AAGCGTTACATCCCTGATAGGAGGTTTCTTTTTCCCTTTGGCGGTTGCGATTGATAAGGCAATCATCCTCT
CCAAGCTTCATCAAGGAACCCATGGAGCGGCCAATGGCAGGAAAAGGATCC----CAGTGCCTCGGCTCTGACTAATAGT
TTAGGTTAGGTGACCGGTGGCGGGAGAGGATCCCAGTGCTCCGTCTCCGGCTAGTAGTTTAGGTTAGGTTTTTTCTC---
GTAGGGGCGCTATTTGGGTGGATGGTGGCGTTTCATCTTTGAGC-TAGTCTTTTCGGCTCTGAT
>chr2D_10
---------CTGGCCGTTTGATCCGACGATGATGAT---CCCTTTCCTTCCGCCTCTCTCTCG----------AACGGAT
TTCCTGCCATGCACCGGGTCCTTCTACAAACCAGCGGCACAAAATCTCGGTCGGGTCCTCGGGTTAGCGGAGAATTCACG
CGTCTGCCCTCCGCGCACACATCACTGCCCACCTGCCCCTTCTGCCCGTGCTGCCCGCTCCTCTATCCTCTCTCTCTCTC
TCTCCAGCATCCTCTTTCTCTCCTTCCTCCCATGGAGTCGGCCT-----------AGTTCTGCCCGTTGAGAGCGCTCAT
ATATCCTCGA-----GACCTCCAGATCTGTGGTCTGTTGCAGTCTCT--GCCTCCTCACAACAACAAGGTAACTAACCTC
TCCTGTTTATCTCGCGTTTATTAACGCATCTCAACTACTTTTCACGACTGCTACTAGTAGTATGCATATTGCATAATCAT
ATCTCTTTTGTTCCTCCTGTCAATTAACCCTAGCTGCCGAGAGGTTGGAT-TTCGCACCTGTTCTAGGCTCTGCTCTG--
---GCAGGCCATGGCAAATTGTGCTATGAGCTCGTTTGTGTGCACCTGCAGAGTCTGAAACCGTCAGGCTTCAGCACAGA
TTTTCTCACTCGCTGAGAGAAATATACTCCTGCTCTTCTTCCTCGTTTTCTGTATACTCGTTTT-CTCTCTTATC--TTT
GCCTGGCACTTCTGTGAGCTAGCTAGTGGCAGTAGTAC-CATCTGTTCAGAAGAAAATATGTGTTTTCGCCTCTGTTCTC
TGACCTGCTAGCAGC---GGAGGATAGGGTGGATTTTTTGCTAGAATTAGGTGCAACAACTTCTCTGGGGAGAACCGCTT
TTTTTCTGCCGGCCCAAACCTTGTTGGGAAAGTAAAATGTTGCGGGCGGAGGTTTTAAGGTTTCCTGCTGCT---TGTGT
GCTCCTGCCTCTGGCTACTAACTAACGGTAAAAGTAAAG-CCCCGTCTCTGT--GACTGACGTGTTGATTTCTCCTGCCT
GCCCAC----GTGTTCAGCCCCTGCA---------------GATGGACACCGCCATGCACCCCGCCGCCG----------
--GCGACGACGACGTCCTCGCCGACCTGCTCACCGT------CGGCACCGGCACCGACACCGAGGTAAAGCCCAAACGAA
ATCCGTGCGGCAAAAATCACATCTCTCTGTCGTTT------------------TACTACTATTTTCGTGTGGGTTACTTT
GATGTTCTTTTTTTCATCCTCGAGTAGCATGCGTGTATTTTTTTATATACGAAA-AAAGATGTGTGAAAGAAAAAAATAA
TATCACGGCCGTTCCATCCA-------GCTTTTGTACCGTTGCGAGAGTGAGATATGGTTTGGACTTTTCCGGATGCGGA
ACCGTGTGGTGCGCTCTAGGCTGCGGTTTTCGGTTGTGGGCTTCAGTTCCGTGTGGGTGGG-CCCTGCCTCAGCCCGCTC
CTTGCA----GCTTGCTTCTTTATTACAGCTCCTTGCCACCCGGGCCCGAATATTCGCTCCCCACAGGCCACGCGAATAT
GCCTTCAGAGAT--GCTCTCTCTCTCTCCCTGAAGAAAAAACTTCGTA------------GCTTAACATGT---------
---------------------AGTCAAGTGACGGTATACGTGCGTATTATGCTACGGTTAATCACTTTCTTAAGCGTGAG
-----------------------------------------------CCAGGCTGTCTTTGACGCGAGAGCTGTCGCGCC
CACGGCCCCACCTGTCTGTGCCTGCTCGCCATTGAGAGTGACACAGGGGACTTTTCTGTAATTATTTGCGGT-GGGGG-T
CCTCTGACTAGAGATATTTGTGATAGGGTCGCTTTCTCCTCT-CACTGTCCATGTTTGTCCACAAAGCCAAGGGGCTTCG
CTGCAAGTGAGCACCACATGGTTTTGTCATTTCTGTGCTCCCAACCACAACATGGTCCAGAG-----TAGCATA------
CAAGGTATGGAACTGCATGGACA--TGCTTGTGGTTATGGAGGTAG---------ATCTTTGTGTCCTAAATATAAGTCT
TTTTAGATATTCCACTATGGGCTACATACGGAGTAAAATGAGTGAATCTACACTCTAAAATATGTCTATATACATCCATA
TGTAATTTGTAGTGGAATCTCTAAAAAGACTTATATTTAGGAACGGAGGGATTCAGAAGATATATGGGTTGAAGGTAAAC
TGGCTGAGCTG--TGTATAAGTGATAAAACTGAGGTTGTTCAGCCTCTTTATAAGTGAGGAACTGAGGGGTGAGATCAGG
CTACACTAGCCTGAAGCTTCAGCTGGTCTGCTCCTTTCCTGCTAAAGTGATAAGCGCTGACAAACAGTGCACAGCAGCCG
ATTCTAGGATAGCAAGCAGGGTTGTTGTTTATTGAGCTCTGCTCTTTTTGCTCACTAATATGACTTGCTGAGTTTACCA-
TAAGAAAAACG----CATGATCTGCTTCCATGCCGCTTGTTACTGACTAGCTTTTGGTCACTTTTATTAATCCTTTGTTC
TTGTGTTGTGTTTGTGGGTTTTTCAGGTTTTGT-----------------------------------------------
--TTTCAAGCTTTGGTCTGGATGTTGGTATTGTGACTTAACTATGTTTGCCTGATTGTTGTACAGGGCATTATTTGTGGT
ATGCCAGACTTCAAGATGGGTGGAAAGAGGGGCGATGAATCTGCCCCTACTGATGCTGGTGATGAAGATGGCGAAGATGA
TGACGGGGACGAGGATGGCGACTTCGCGGAGGGCGAAGAGGAAATCTCGGAAGGAGAGGAGTATGACAACCCCAAGGCCA
GTGACGCCAAGAAGAAACAAATAGGCGAGGGTGAGGAGAATGGCGAGGATGATGAGGAAGAACAAGAGGAGCAGGAAGGT
GGAGGAGGTGACGACGATGATGACGACGACGA---CGACGATGACAATGAGGACGATGACGATGATGACGATGAAGTCGC
TGCTGAAGACGATGAGGATGGAGTAGAAGAGGAGGATGACGACCAGGACAACGACAATGACGAGGAGGACGACGACGAGG
ACTCGCTCCAGCCCCCGAAGAAGAGGAAGAAGTGAAGCCCTTCGACGCGGCTGCTTTAGTCACCATGCGATGAGATGTGC
CTGTTCTTCACTGTGTTCTGGAAACTTTCCTTAGAGTTAAAAATG-CCCCACACGATCACAATGTGTGGGCTTGTAGGAG
CGATTAGAGGGAACTTTGTTGTCATCGTTGTTTTGCTTCTGTGGAGTTGATCGAACAGATGTTTCGCTAACATAATTGTA
CCCGAGTGGCGAAAGCCTCAAGATTTGAATATGTCAGTCAACTCTTTTTATCTCCTTCCGGCATCGTTCT--GTGCAATC
TTGTTCAGAACACATTGTGTTGGTAGCTCCTTAAATAAGGCCAAATCACATTGTTGATAGCTCCTGGATTTATCGTGGGT
GCTGTCTGGTTTCTGCATAATTCTGCTGATGATGGT-----GATGATTATGGTAATGTCTAGATATATGGCTTGTTAGTG
TAGTTCTCCCTCAT------------------------------------------------------------------
-----------GACGGATGGAGTATTTTCTAGATAATTAAACAGA--ACATCTCTGTCCAAAAGAAAATAAAGAGAACAT
CTCCCTTGGTCTTTGCACACTGTCCAAGCAGCATGGCTCAGATGTCACACCCATAGGCGTGATCTAGGAAGGTGCCACAG
TGTCAC-TGATGCCACCCTTCAGAGAAGT---------------------------------------------------
-----------------------------------------------------------------------AGCTCATAT
CAAAAAGGAAATCGTTACCTCCCTGTTAGGAGGTTTCTTTTTCCCTTTCGCGGTTGCGATTGGTAGGACAATCATCCTCT
CCAAGCTTCGTCAAGGAACCCATGGAGCGGCCAATGGCATGAAAAGGATCCCAGTCAGTGCCTCGGCTCCGGCTAATAGT
TTAGGTTAGATGACCGGTGGCAGGAGAGGATCCCGGTGCTCCGGCTCCGGCTAGTAGTTTAGGTTAGGTTTTTTTTTTTG
GTAGGGGCGCTATGTGGGTGGATGGCGGCGTTTCATCTTTGAGC-TAGTCTTTTGGGCTCTGAT
>chr2B_10
---------CTGGCCGTTTGATCCGACGATGATGATTATCCCTTCCCTTCCGCCTCTCTCTCG----------AACGGAT
TTCCTGCCATGCACCGGGTCCTTCTACAAACCAGCGGCACAAAATCTCTCTTCGCCCCTCGGGTTTGCGGAGAATTTACG
CGCCTGCCCTCCGCGCACACATCACTGCCCACCTGCCC----------TGCTGCCCGCTCCTCTATCCTCTC----TCTC
TCTCCAGCATCCTCTTTCTCTCCTTCCTCCCATGGAGTCGGCATAGCCACTAGCCGGTTCTGCCCGTTGAGAGCGCTCAT
ATACCCTCCAC-----ACCTCCAGATCTGTGGCCTGTTGTAGTCTCT--GCCTCCTCAGAACAACAAGGTAACTAACCTC
TCTT-----------CTTTATTAACGCATCTCAACTGCTTTTTACTCCTGCTAGTGTGAAGA----------ATAATCAT
ACGTCTCTTGTTCCTCCTGTTAATTAACCCTAGCTGTTAAAACAGATTTTTTTGGCACCTGTTCTAGGCTCTGCTCTG--
---ACAGACCACGGCAAATTGTGCTATGAGTTTGTTTGTGTGCACCTGCAGAGCCTGAAACCTTCAGGCTCCAGCACAGA
TTTTCTCACTCGCTGAGAGGAACACT------------------------------CTCGTTTT-CTCTCTTATCTTTTT
GCCTGGCACTTCTGTGAGCTAGTAGCTAGGAGTGGTAAGCATCTGTTCAGAAGAAAAGATGTGTTTTCGCCTCTGTTCTC
TGGCCTGCCAGTAGCGGAGGAGGATAGGGTGGG-TTTTTGCTAGAATTAGGTGCAACAAAATCTCTGCGAAGAATCG-TT
TTTTTCTGCCGGCCCAAACCTTGTTGGGAAAGTAAAATGTTGCGGGCGGAGGTTTTAAGGTTCCCTGCTGCTGCTTGTGT
GCTGCTGCTGCCTCTT-----CTAACGGTAAAAGTAAAAACCTTATCTCTGACCGACTGACGTGCTGATTTCTCTTCCTG
CCCACGTGTTGTGTTCAGCCCCCGCAGCCGCGCCCGGATCGGATGGACACCGCCATGCACCCCGCCGGCGCCGACGACGG
CGGC------------CTCGCCGACCCGCTCACCGGCAACGCGGGCACAGGCAC------CGAGGTAAAACCCAGACGAA
ATCTCTGCTACAAAAATCACGTCTCTCTTTTCCCTTTTTCTTTGTCGTTATACTACTACTATTTTCGTGCGGGTTACTTT
GATGTTCTTTTTC-TACCCTCGAGCAGCATGCGCGTATTTTTTT-TATAATAAA-AAAGATGA-------AAGAAAAAAA
TATCACGGCCGTTTCATTCATGCTGCTGCTTTTGTACCGTTGTGAGAGTGAGATATGGTTTGGACTTTTCCGGATGCGGA
ACCGTGTGGTGCGCTCTAGGCTGCGGTTTTCGGTCGTGGGCTTCAGTTCCGCGGTGGTGGG-CCCTGCGTCAGCCCGCTC
CTTG-------CTTGCTTCTTTATTACAGCTCCTTGCCACTCGGGCCCGAATATTCGCTCCCCACAGGCCACGCGAATAT
GCCTTCAGAGATGCGCTCTCTCTCTCTCTGAGAAGAAAAAACTTCGTA------------GCTTAACCTGTAAGCAGCAG
GTCTAGCAGGTGCTTAGGTCAAGTCAAGTGACG----------GTATTATGCTACGGTTAATCACTTTCTTAAGCCTGAG
-----------------------------------------------ACAGGCTGTCTTTGACGCGAGAGCTGTCGCTCC
CGTGGCCCCACCTGTCTGTGTCTGCTCGCCATTGAGAGCGACACAGGGGACTTTTCTGTAATTATTTGCGGT-GGGGGGT
CCTCTGACTAGAGATATTTGTGATAGGGTCGCTTTCTCCTCTCCACTGTCCATGTTTGTCCACAAAGCCAAGGGGCTTCG
CTGCAAGTGAGCACCACATGGTTTTGTCATTTCTGTGCTCCCAGCCACAACATGGTCCAGAGGAGAGTAGCATA------
CAAGGTATGGAACTGCGTGGACT--TGCTTGTGGTTATGGAGGTAG---------ATCTTTGTG----------------
-------------------------------------------------ACACTCTGAAATA------------------
-------------------------------------------------GATTCAGAAGATATATGGGTTGAAGGTAAAC
TGGCTGAGTTATATGTGTAAATAATGAAACTGAGGTTGTTCAGCCTCTTTATAAGTGAGGAACTGAGGGGTGAGATCAGG
CTACACTAGCCTGAAGCTTCGGCTGATCTGCTCCTTTCCTGCTAAAGTGCTGAGGTCTAACAAACAGTACACAGCAGCCA
ATTCTAGGATAGCAAACAGGGTTGTTGTTTATTGGGCTATGCTCTTCTTGCTCACTAATATGAGATGCTGAGTTTACCTT
CCATTAAGAACAACCAATGATCTGCTACCATGCCCCTTGTTATTGACTAGCTTTTGC------------------TGCTC
CTGTGTTGTGCTTGTGGG--------------------------------------------------GTTTTTCAGTTT
TGTTTCAAGCTTTGGTCTGGATGTTGGTACTGTGACTTAACTATGTTTGCCTGATCGTTGTACAGGGCATTATTTGTGGT
ATGCCAGACTTCAAGATGGGTGGAAAGAGGGGCGATGAATCTGCCCCTACTGATGCTGGTGATGAAGACGGCGAAGATGA
TGACGGGGATGAGGATGGTGACTTCGCGGAGGGCGAAGAGGAAATCTCGGAAGGAGAGGAGTATGACAACCCCAAGGCCA
GTGACGCCAAGAAGAAACAAATAGGCGAGGGTGAGGAGAATGGCGAGGATGATGAGGAAGAACAAGAGGAGCAGGAGGGT
GGAGGAGGTGACGACGATGATGATGACGACGACAACGACGATGACAATGAGGACGACGACGATGATGACGATGATGTCGC
TGCTGAAGACGATGGAGATGGAGTAGAAGAGGAGGATGAT------------GACGATGATGAGGAGGAGGACGATGAGG
ACTCGCTCCAGCCCCCGAAGAAGAGGAAGAAGTGAAGCCCTTCGACGCGGCTGCTTTAGTCACCATGCGACGAGATGTGC
CTGTCCTTCACTGTGTTCTGGAAACTTTCCTTAGAGTTAAAAATGCCCCCACACGATCACAATGTGTGGGCTTGTAGGAG
CGATTAGAGGGAACTTTGTTGTCACCGTTGCTTTGCTTCTGTGGAGTTGATCGAACAGATGTTTCGCTAACATAATTGTA
CCTGAGTGGCGAAAGCCTCAAGATTTGAATATGTCAGTCAACTCTTTTTATCTCCTTCCGGCATCGTGTTCCGTGCAATC
TTGTTCAGAACACATTGTGTTGGTAGCTCCTTAAATAAGGCCAAATCACATTGTTGATAGCTCCTGGATTTATCGTGGGT
GCTGTCTGGTTTCTGCATAATTCTGCTGATGATGACGACTAGATAATTACGGCAATGTCTAGATATATGGCTTGTTAGTG
TAGT----------------------------------------------------------------------------
-----------------------ATTTTCTAGATAATTAAACAGA--ACATCTTTGTACAAAAGAAAATAAAGAGAACAT
CTCCCTTGGTCTTTGCACACTGTCCAAGCGGCATGGCTCAGATGTCACACCCATAAGCGTGCTCTAGGAAGGTGC-----
---CAC-TGATGCCACCCTTCAGGCCTTGTTCGGTTACACCCCTCCACAAGAGGATTGAAGGGGATTTGGGGAGGTTTTG
ACTTGTAGAGGATTAAATCCACTTCAATCCCTGCCAAATCCCTCTCAACCGAACACAGCCTCAGAGAAGTAAGCTCATAT
CAAAAAG-AAATCGCTACGTCCCTGTT---AGGTTTGTTTTTCCCTTTCGCGGTTGCGATTGCTAAGGCAATCATCCTCT
CCAAGTTTCGTCAAGGAACCCATGGAGCGGCCGATGGCAGGAAAAGGATCC----CCC-------------GCTAATAGT
TTAGGTTAGGTGACGGGTGGCGGGAGAGGATCCCGGTGCTCTGGCTCCGGCTAGTAGTTTAGGTTAGGTTTTTTCTC---
GTAGGGGCGCTATTTGGGTGGATGGCGATGTTTCATCTTTGAGCGTAGTCTTTTGGGCTCTGAT
>SNPs
SSSSSSSSS------------------------S----------------------------SSSSSSSSSSS-------
-----------------------S-----S-------S-----------------------------S------------
SS-S--------------------------------------------S-------------------SS----------
------------------------S----------SSSS--SS-S-S------------S--------------------
--------SSSSSSS--------------------------------SS--S------S-----SS--------------
--S------SS----------------------------------S------S---------------------------
----S-S------S-----S-----S--------S---S----------S----------------------------SS
SSS--------------------------S--------S-----------------------------S-----------
------------------------S-SS-SS-SS------------------------------S---------------
S-------------------SS---S-SS-----------------------------S---------S-S---S-----
------S---------------------------S----------------S----------------------------
----------------------------------S---------------------------------------S-S--S
SS---------------------------------------------------S---SS---------------------
--------------------------------------------------------------------------------
------------------------------S----S--------------------S----------S------------
----------------------------S-SS-S----S--SS-------------------------------------
--S----------------------------------------------S----S---------S---------------
----------------------------------------------------------S---------------------
------------------------S--------------S---------------------S------------------
----SSSSSS----------------------------------S-----------------------------------
------------------------S----------------------SSSSSSSSSSSSS----------S---------
SS--------------------------S--------------S----------S-------------------------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------S--------------
S-------------S------------------------------S----------------------S---S-------
------------------------------S-------------------------------------------------
--------------------S--------S--SS---------------S------------------------SSSSSS
---------S-------------SS--S----S----------SS-SSSSSSSSS-------------------------
-------------------------------------------------S------------------------------
-------------------------------------------------------S----S-S--S--------------
---------------------------------------------------S----------------------------
--S---S-----S---S-------------------SS------------------------------------------
S----------S-----S-------------------SS-------S-----S----------------S----------
---------S----------------S----------S------S------------S------SS--------------
-----------------------S--S---SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------
-----------------S-----S----S--S------------------------S----------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------S-----------S--------------------------------S--------
------------------------------------------------------------------------S-------
------------------------S-------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
----S-S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS------S--S----------S-------------SS---------------------------------
-----------------------------------------------------------------------------S--
--S---S-------------------------------------------------------------------------
------------------------------------------------------------------------SS------
-----------S------S------S----------------------S-------------S-----------------
---------S-----------------------------------------------------------S-S--------
----------------------------------S--------S------------------------------------
-------------------------S----------------------------S---------
>forward_148
--------------------------------------------------------------------------------
------------------------------------------------TCTTCGGTCCTCGGGTTAGT------------
--------------------------------------------------------------------------------
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>reverse_1652
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------GTGTGGCTTGCTTAACCTGC---------
--------------------------------------------------------------------------------
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>forward_835
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------TAGCGGAGGATAGGGTGGAG---------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------
>reverse_2372
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------CATGAGGGGTGAGATCAGGC---------
--------------------------------------------------------------------------------
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>forward_1671
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------GTGTGGCTTGCTTAACCTGC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>reverse_2692
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------GCTGTTTGTGCTTGTGGGTT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>forward_2605
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TGCCATGCCCCTCGTTATTT-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>reverse_4170
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------ATCAAGGAACCCATGGAGCG---------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
